MS002056 (gene) Bitter gourd (TR) v1

Overview


Name	MS002056
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold30: 2083417 .. 2084468 (+)
RNA-Seq Expression	MS002056
Synteny	MS002056

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAACGAGTTTTCAAGTTTGGTAGTAGACAATCTGCAGAAAAGCCGATGCACGGAGAAGAACAAATGGAAAGTTGATGGTGTTGAATCATTTAAGAGAAGAAGCTACATGGTACAAGAGAGTGATAATGGTCCTGGTGAATCTGAACCAAGTGGAGATGGAAGGAGTCGGTTTTCCTCAATGAGTTCAATTGACGACGAGTTGCCTGAGTTCGTCGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGAAACTTCTCATGAAAAGTGTTTTGAGGAGGATTGTGACAGAGAGAATGGTTATGTCCCCTACCTGCTTAAATATAATATAGCAGTAAGTGATGGTGGAGCAACTGAAGAATCCGAGGACTTGGAGTCGTCAATTTCAAGTATTGAATCAATGCAGGTCCTTGAGAAAGATTTCTTTAACAAAGTAAATGAGAAACGAAAGGTTCATTATGATGAAATAGACGAAGTCCCTTCTGACCTTCCCAGGAAGAAAACTGTGCCTAAATTACTTCTTGATAGAAAGGTAAGAATAAACTTACTTAGCTTACTCCTCGATGGCTTTTTCACTTGGAGACTTGATTTGATTGTCTGCAAATTGTGTAGGTTACAGGTAAAAAGGCAGCTGCTTCTACAAACTCTATTGCAATATCATTGAGTAAGATACTTGATGAAAACAAACACAAAGGCAAAGCAGCTGCTAGAAGCAACACTGAACACGAGCATGGAAGCATTTATTGCAACTCCAATTTATCAATGAGCAAGATACGCGGCGGTGCTAGCAGTGGTGGACACTGTCATGAATGTGGAAGCACATCCATACCTGAAAACTATGCACCAGAAGACCAAATGGGATCACACAGAAGCCACGGCTTTGTTTATCAAAGAGAAGACGGTTCCTCTGAACTTGATCCTGCTTTCAACCCAGTGAGAAAACCTTCATTGTCATCTTATTTGGGCAGTACATCGCTTCGGTCGAATAGCAGCACAAACAGCTCGCATTCTTTTGCATTTCCAATG

mRNA sequence

ATGATGAACGAGTTTTCAAGTTTGGTAGTAGACAATCTGCAGAAAAGCCGATGCACGGAGAAGAACAAATGGAAAGTTGATGGTGTTGAATCATTTAAGAGAAGAAGCTACATGGTACAAGAGAGTGATAATGGTCCTGGTGAATCTGAACCAAGTGGAGATGGAAGGAGTCGGTTTTCCTCAATGAGTTCAATTGACGACGAGTTGCCTGAGTTCGTCGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGAAACTTCTCATGAAAAGTGTTTTGAGGAGGATTGTGACAGAGAGAATGGTTATGTCCCCTACCTGCTTAAATATAATATAGCAGTAAGTGATGGTGGAGCAACTGAAGAATCCGAGGACTTGGAGTCGTCAATTTCAAGTATTGAATCAATGCAGGTCCTTGAGAAAGATTTCTTTAACAAAGTAAATGAGAAACGAAAGGTTCATTATGATGAAATAGACGAAGTCCCTTCTGACCTTCCCAGGAAGAAAACTGTGCCTAAATTACTTCTTGATAGAAAGGTTACAGGTAAAAAGGCAGCTGCTTCTACAAACTCTATTGCAATATCATTGAGTAAGATACTTGATGAAAACAAACACAAAGGCAAAGCAGCTGCTAGAAGCAACACTGAACACGAGCATGGAAGCATTTATTGCAACTCCAATTTATCAATGAGCAAGATACGCGGCGGTGCTAGCAGTGGTGGACACTGTCATGAATGTGGAAGCACATCCATACCTGAAAACTATGCACCAGAAGACCAAATGGGATCACACAGAAGCCACGGCTTTGTTTATCAAAGAGAAGACGGTTCCTCTGAACTTGATCCTGCTTTCAACCCAGTGAGAAAACCTTCATTGTCATCTTATTTGGGCAGTACATCGCTTCGGTCGAATAGCAGCACAAACAGCTCGCATTCTTTTGCATTTCCAATG

Coding sequence (CDS)

ATGATGAACGAGTTTTCAAGTTTGGTAGTAGACAATCTGCAGAAAAGCCGATGCACGGAGAAGAACAAATGGAAAGTTGATGGTGTTGAATCATTTAAGAGAAGAAGCTACATGGTACAAGAGAGTGATAATGGTCCTGGTGAATCTGAACCAAGTGGAGATGGAAGGAGTCGGTTTTCCTCAATGAGTTCAATTGACGACGAGTTGCCTGAGTTCGTCGTTTTCCTTCAAGAAACCAACTATGAATTTGTGAAAGACATTTGCATTGACAAAGCAGAAACTTCTCATGAAAAGTGTTTTGAGGAGGATTGTGACAGAGAGAATGGTTATGTCCCCTACCTGCTTAAATATAATATAGCAGTAAGTGATGGTGGAGCAACTGAAGAATCCGAGGACTTGGAGTCGTCAATTTCAAGTATTGAATCAATGCAGGTCCTTGAGAAAGATTTCTTTAACAAAGTAAATGAGAAACGAAAGGTTCATTATGATGAAATAGACGAAGTCCCTTCTGACCTTCCCAGGAAGAAAACTGTGCCTAAATTACTTCTTGATAGAAAGGTTACAGGTAAAAAGGCAGCTGCTTCTACAAACTCTATTGCAATATCATTGAGTAAGATACTTGATGAAAACAAACACAAAGGCAAAGCAGCTGCTAGAAGCAACACTGAACACGAGCATGGAAGCATTTATTGCAACTCCAATTTATCAATGAGCAAGATACGCGGCGGTGCTAGCAGTGGTGGACACTGTCATGAATGTGGAAGCACATCCATACCTGAAAACTATGCACCAGAAGACCAAATGGGATCACACAGAAGCCACGGCTTTGTTTATCAAAGAGAAGACGGTTCCTCTGAACTTGATCCTGCTTTCAACCCAGTGAGAAAACCTTCATTGTCATCTTATTTGGGCAGTACATCGCTTCGGTCGAATAGCAGCACAAACAGCTCGCATTCTTTTGCATTTCCAATG

Protein sequence

MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFSSMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKIRGGASSGGHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLSSYLGSTSLRSNSSTNSSHSFAFPM

Homology

[Close]

BLAST of MS002056 vs. NCBI nr
Match: XP_022135556.1 (uncharacterized protein LOC111007481 [Momordica charantia])

HSP 1 Score: 616.7 bits (1589), Expect = 1.1e-172
Identity = 317/324 (97.84%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           MMNEFSSLVVDNLQKSR TEKNKWKVDGVESF+RRSYMVQESD+G GESEPSGDGRSRFS
Sbjct: 1   MMNEFSSLVVDNLQKSRFTEKNKWKVDGVESFRRRSYMVQESDDGLGESEPSGDGRSRFS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA
Sbjct: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
           VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK
Sbjct: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI
Sbjct: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS 300
           RGGASS GHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS
Sbjct: 241 RGGASSCGHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS 300

Query: 301 SYLGSTSLRSNSSTNSSHSFAFPM 325
           SYLGSTSLRSNSSTNSS SFAFP+
Sbjct: 301 SYLGSTSLRSNSSTNSSQSFAFPI 324

[Close]

BLAST of MS002056 vs. NCBI nr
Match: XP_022969028.1 (uncharacterized protein LOC111468138 [Cucurbita maxima])

HSP 1 Score: 384.4 bits (986), Expect = 9.6e-103
Identity = 215/325 (66.15%), Postives = 252/325 (77.54%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVV+N+ KS   EKNK KVD VESFKRR+ +VQES++ PGESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK N+A
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
            SD   TEESED+ESSI S +S QV+EK+  NKVNE +K  YD  DE+PSD   KK+VPK
Sbjct: 121 ASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKKSVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN   EHG+++ NS LS S +
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNI--EHGNVFRNSGLSPSGV 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 300
            G           G TS  ++YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN VR+PS 
Sbjct: 241 GGS----------GRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRPSF 300

Query: 301 SSYLGSTSLRSNSSTNSSHSFAFPM 325
           SSY+GS SL SN STNSSHSFAFP+
Sbjct: 301 SSYVGSDSLGSNDSTNSSHSFAFPI 313

[Close]

BLAST of MS002056 vs. NCBI nr
Match: XP_023531769.1 (uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-102
Identity = 215/325 (66.15%), Postives = 254/325 (78.15%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVV+N+ KS   EKNK KVD VESFKRR+ +VQES++ PGESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK ++A
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSDVA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
            SD   TEESEDLESSI S +S QV+EK+  NKVNE +K  YD  D++PSD   KK+VPK
Sbjct: 121 ESDIKTTEESEDLESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN  +EHG+++ +S LS S +
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN--NEHGNVFHDSGLSPSGV 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 300
            GG          G TS  E+YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN VR+PS 
Sbjct: 241 GGG----------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRPSF 300

Query: 301 SSYLGSTSLRSNSSTNSSHSFAFPM 325
           SSY+GS SL SN STNSSHSFAFP+
Sbjct: 301 SSYVGSDSLGSNDSTNSSHSFAFPI 313

[Close]

BLAST of MS002056 vs. NCBI nr
Match: XP_022933900.1 (uncharacterized protein LOC111441174 [Cucurbita moschata] >KAG7021566.1 hypothetical protein SDJN02_15292 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-99
Identity = 212/325 (65.23%), Postives = 251/325 (77.23%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVV+N+ KS   EKNK  VD VESFKRR+ +VQES++ PGESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK N+A
Sbjct: 61  S-SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
            SD   TEESED+ESSI S +S QV+EK+  NKVNE +K  YD  D++PSD   KK+VPK
Sbjct: 121 ESDIETTEESEDVESSIMSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN  +E G+++ +S L  S +
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN--NERGNVFHDSGLPPSGV 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 300
            GG          G TS  E+YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN VR+PS 
Sbjct: 241 GGG----------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRPSF 300

Query: 301 SSYLGSTSLRSNSSTNSSHSFAFPM 325
           SSY+GS SL SN STNSSHSFAFP+
Sbjct: 301 SSYVGSDSLGSNDSTNSSHSFAFPI 312

[Close]

BLAST of MS002056 vs. NCBI nr
Match: XP_031742010.1 (uncharacterized protein LOC105434534 [Cucumis sativus] >XP_031742012.1 uncharacterized protein LOC105434534 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-98
Identity = 214/332 (64.46%), Postives = 250/332 (75.30%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVVDN++KSR  EKNK KVD +E FKRR+Y+VQESD GP ESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  S----MSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLK 120
           S     SSI+DELPE VVFLQETNYEFVKDICID+A TS EKCFEE C  EN +VP +LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKK 180
           YN   +D  +TEES D ES+ISS +S Q L+K+ FN+V EK+K H D IDEVPS++P KK
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKN-FNEVYEKQKFHSDAIDEVPSEVPHKK 180

Query: 181 TVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLS 240
           +VPKL LDRKVTGKK A+STNSIAISL+KILDENK+KGKA ARSN   EHGSI  NS LS
Sbjct: 181 SVPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNI--EHGSICRNSGLS 240

Query: 241 MSKIRGGASSG----GHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFN 300
            S + GG+S+     GHC +C   ++ E Y PE++ G + SH         SS  DP+ N
Sbjct: 241 QSTVEGGSSNWTAGCGHCRDC---TMAEYYTPENETGLYSSH--------CSSAGDPSLN 300

Query: 301 PVRKPSLSSYLGSTSLRSNSSTNSSHSFAFPM 325
            VR+PSLSSYLGS SLRSNSSTNSSHSFAFP+
Sbjct: 301 SVRRPSLSSYLGSGSLRSNSSTNSSHSFAFPI 318

[Close]

BLAST of MS002056 vs. ExPASy TrEMBL
Match: A0A6J1C133 (uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007481 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.6e-173
Identity = 317/324 (97.84%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           MMNEFSSLVVDNLQKSR TEKNKWKVDGVESF+RRSYMVQESD+G GESEPSGDGRSRFS
Sbjct: 1   MMNEFSSLVVDNLQKSRFTEKNKWKVDGVESFRRRSYMVQESDDGLGESEPSGDGRSRFS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA
Sbjct: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
           VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK
Sbjct: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI
Sbjct: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS 300
           RGGASS GHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS
Sbjct: 241 RGGASSCGHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFNPVRKPSLS 300

Query: 301 SYLGSTSLRSNSSTNSSHSFAFPM 325
           SYLGSTSLRSNSSTNSS SFAFP+
Sbjct: 301 SYLGSTSLRSNSSTNSSQSFAFPI 324

[Close]

BLAST of MS002056 vs. ExPASy TrEMBL
Match: A0A6J1HZT3 (uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 4.6e-103
Identity = 215/325 (66.15%), Postives = 252/325 (77.54%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVV+N+ KS   EKNK KVD VESFKRR+ +VQES++ PGESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGKVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK N+A
Sbjct: 61  STSSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
            SD   TEESED+ESSI S +S QV+EK+  NKVNE +K  YD  DE+PSD   KK+VPK
Sbjct: 121 ASDIETTEESEDVESSILSTDSTQVVEKNLLNKVNENQKFCYDAKDEIPSDFSNKKSVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN   EHG+++ NS LS S +
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSNI--EHGNVFRNSGLSPSGV 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 300
            G           G TS  ++YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN VR+PS 
Sbjct: 241 GGS----------GRTSTAKDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRPSF 300

Query: 301 SSYLGSTSLRSNSSTNSSHSFAFPM 325
           SSY+GS SL SN STNSSHSFAFP+
Sbjct: 301 SSYVGSDSLGSNDSTNSSHSFAFPI 313

[Close]

BLAST of MS002056 vs. ExPASy TrEMBL
Match: A0A6J1F648 (uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC111441174 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 6.3e-100
Identity = 212/325 (65.23%), Postives = 251/325 (77.23%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVV+N+ KS   EKNK  VD VESFKRR+ +VQES++ PGESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVNNMCKSPSMEKNKGNVDDVESFKRRNCIVQESEDDPGESEASGDRMSRYS 60

Query: 61  SMSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLKYNIA 120
           S SSI+DELPE VVFLQETNYEFVKDICIDKA TS E+CFEE+CD +NGYVP +LK N+A
Sbjct: 61  S-SSINDELPELVVFLQETNYEFVKDICIDKAGTSCEECFEENCDTQNGYVPCMLKSNVA 120

Query: 121 VSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKKTVPK 180
            SD   TEESED+ESSI S +S QV+EK+  NKVNE +K  YD  D++PSD   KK+VPK
Sbjct: 121 ESDIETTEESEDVESSIMSTDSTQVVEKNLLNKVNENQKFCYDAKDDIPSDFSNKKSVPK 180

Query: 181 LLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLSMSKI 240
           L LDRKVTGK+ AAS+NSIAISL+KILDENK KGK  A SN  +E G+++ +S L  S +
Sbjct: 181 LHLDRKVTGKRVAASSNSIAISLTKILDENKLKGKGVAGSN--NERGNVFHDSGLPPSGV 240

Query: 241 RGGASSGGHCHECGSTSIPENYAPEDQMGSHRS-HGFVYQREDGSSELDPAFNPVRKPSL 300
            GG          G TS  E+YAPE+Q G +RS +GFVYQR+DGSSE+DPAFN VR+PS 
Sbjct: 241 GGG----------GRTSTAEDYAPENQTGRYRSIYGFVYQRDDGSSEVDPAFNTVRRPSF 300

Query: 301 SSYLGSTSLRSNSSTNSSHSFAFPM 325
           SSY+GS SL SN STNSSHSFAFP+
Sbjct: 301 SSYVGSDSLGSNDSTNSSHSFAFPI 312

[Close]

BLAST of MS002056 vs. ExPASy TrEMBL
Match: A0A0A0LRX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015630 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.3e-99
Identity = 214/332 (64.46%), Postives = 250/332 (75.30%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVVDN++KSR  EKNK KVD +E FKRR+Y+VQESD GP ESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQESDAGPSESEASGDRMSRYS 60

Query: 61  S----MSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLK 120
           S     SSI+DELPE VVFLQETNYEFVKDICID+A TS EKCFEE C  EN +VP +LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSREKCFEESCHTENDHVPCMLK 120

Query: 121 YNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKK 180
           YN   +D  +TEES D ES+ISS +S Q L+K+ FN+V EK+K H D IDEVPS++P KK
Sbjct: 121 YNAGETDAESTEESNDSESTISSTDSTQTLDKN-FNEVYEKQKFHSDAIDEVPSEVPHKK 180

Query: 181 TVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLS 240
           +VPKL LDRKVTGKK A+STNSIAISL+KILDENK+KGKA ARSN   EHGSI  NS LS
Sbjct: 181 SVPKLFLDRKVTGKKEASSTNSIAISLNKILDENKNKGKAVARSNI--EHGSICRNSGLS 240

Query: 241 MSKIRGGASSG----GHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFN 300
            S + GG+S+     GHC +C   ++ E Y PE++ G + SH         SS  DP+ N
Sbjct: 241 QSTVEGGSSNWTAGCGHCRDC---TMAEYYTPENETGLYSSH--------CSSAGDPSLN 300

Query: 301 PVRKPSLSSYLGSTSLRSNSSTNSSHSFAFPM 325
            VR+PSLSSYLGS SLRSNSSTNSSHSFAFP+
Sbjct: 301 SVRRPSLSSYLGSGSLRSNSSTNSSHSFAFPI 318

[Close]

BLAST of MS002056 vs. ExPASy TrEMBL
Match: A0A1S3BVX8 (uncharacterized protein LOC103494068 OS=Cucumis melo OX=3656 GN=LOC103494068 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.5e-98
Identity = 212/332 (63.86%), Postives = 252/332 (75.90%), Query Frame = 0


Query: 1   MMNEFSSLVVDNLQKSRCTEKNKWKVDGVESFKRRSYMVQESDNGPGESEPSGDGRSRFS 60
           M NEFS LVVDN++KSR  EKNK KVD +E FKRR+Y+VQE D GP ESE SGD  SR+S
Sbjct: 1   MRNEFSDLVVDNMKKSRKVEKNKLKVDDIEFFKRRNYVVQERDAGPSESEASGDRMSRYS 60

Query: 61  S----MSSIDDELPEFVVFLQETNYEFVKDICIDKAETSHEKCFEEDCDRENGYVPYLLK 120
           S     SSI+DELPE VVFLQETNYEFVKDICID+A TS +KCF+E C  EN +VP +LK
Sbjct: 61  SKSSVKSSIEDELPELVVFLQETNYEFVKDICIDEAVTSRQKCFKESCHTENDHVPCMLK 120

Query: 121 YNIAVSDGGATEESEDLESSISSIESMQVLEKDFFNKVNEKRKVHYDEIDEVPSDLPRKK 180
           YN   +D  +TEES D +S+ISSIES Q LE++ FN+V EK+KVH D ID VPS++PRKK
Sbjct: 121 YNAGETDAESTEESNDSDSTISSIESTQTLEEN-FNEVYEKQKVHSDAID-VPSEVPRKK 180

Query: 181 TVPKLLLDRKVTGKKAAASTNSIAISLSKILDENKHKGKAAARSNTEHEHGSIYCNSNLS 240
           +VPKL LDRKVTGKKAA+STNSIAISL+KILDEN++KGKA ARSN   EHG  +CNS LS
Sbjct: 181 SVPKLFLDRKVTGKKAASSTNSIAISLNKILDENRNKGKAVARSNI--EHGKNFCNSGLS 240

Query: 241 MSKIRGGASSG----GHCHECGSTSIPENYAPEDQMGSHRSHGFVYQREDGSSELDPAFN 300
            S I GG+S+     GHCH+C      ++Y PE++ G + SH         SS  DP+ N
Sbjct: 241 QSTIEGGSSNWTAGCGHCHDCTMAEY-KDYTPENETGLYSSH--------CSSAGDPSLN 300

Query: 301 PVRKPSLSSYLGSTSLRSNSSTNSSHSFAFPM 325
            VR+PS+SSYLGS SLRSNSSTNSSHSFAFP+
Sbjct: 301 SVRRPSMSSYLGSGSLRSNSSTNSSHSFAFPI 319

The following BLAST results are available for this feature:

BLAST of MS002056 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135556.1	1.1e-172	97.84	uncharacterized protein LOC111007481 [Momordica charantia]	[more]
XP_022969028.1	9.6e-103	66.15	uncharacterized protein LOC111468138 [Cucurbita maxima]	[more]
XP_023531769.1	1.3e-102	66.15	uncharacterized protein LOC111793924 [Cucurbita pepo subsp. pepo]	[more]
XP_022933900.1	1.3e-99	65.23	uncharacterized protein LOC111441174 [Cucurbita moschata] >KAG7021566.1 hypothet...	[more]
XP_031742010.1	1.1e-98	64.46	uncharacterized protein LOC105434534 [Cucumis sativus] >XP_031742012.1 uncharact...	[more]

BLAST of MS002056 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS002056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C133	5.6e-173	97.84	uncharacterized protein LOC111007481 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1HZT3	4.6e-103	66.15	uncharacterized protein LOC111468138 OS=Cucurbita maxima OX=3661 GN=LOC111468138...	[more]
A0A6J1F648	6.3e-100	65.23	uncharacterized protein LOC111441174 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A0A0LRX2	5.3e-99	64.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015630 PE=4 SV=1	[more]
A0A1S3BVX8	1.5e-98	63.86	uncharacterized protein LOC103494068 OS=Cucumis melo OX=3656 GN=LOC103494068 PE=...	[more]

BLAST of MS002056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..324
None	No IPR available	PANTHER	PTHR33914:SF4	SUBFAMILY NOT NAMED	coord: 3..323
IPR040378	Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE	PANTHER	PTHR33914	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN	coord: 3..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002056.1	MS002056.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009786	regulation of asymmetric cell division