MS002050 (gene) Bitter gourd (TR) v1

Overview


Name	MS002050
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Squamosa promoter-binding-like protein 6
Location	scaffold30: 2041532 .. 2045264 (-)
RNA-Seq Expression	MS002050
Synteny	MS002050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTTGGAGTTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAAATGAATTCACCTACTAGTTCGCTTGCAAGAAATAAAGACTCTTTGTTGGGCTGGGAATTCAAAAATCCCTGCAACTTTGGTGGCGCTATGTTAGCAACGGGTCAACAAGTCGACAATCACGGTTTCGGGGAACTTGTTTTCCCGGAAATGAGTGGGAAACAGTTACCTGACAATTCAGTTTGTGATATTCTGAATAGCAAGGTTGCTGGGGGAAGATTTCTGAATCCAACTATGAATTCCTCCAATGCATTTCTGGGAGAGGACGAATCCACTTCAAAGCTCTCGGGCTCTATTTTGGACTCGAGCAGCCGAGATTCGTCGTTCATTGATTTAAAGCTGGGGAGATTTGCTGACCAAAGGGATGCTCATGGCTACAAATTTTTGAAGGGAGCCCCCATTTTATCTTCTTCTGAGTCATCGATGCCTTCGAAAAGGGTACGAGCTTCGGGGTTGAATTCTCAAACTTATTTCTGTCAAGTTTATGGCTGTAATAAGGATCTCAGCTCCTCTAAAGATTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGAATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTGGTTAATTTTCCATCAGTCGTAATACTAATTCCTATGTGCTTACTTTCTGTTTCCTAATACTGCTAACAAGAAACATGAAAATAAAATTACTTCATACTCAACGAAAGCTTTATGTCGGTCCGCATACTTCCATATTTTGCTTCCATTGAAACAAAAACAAGGTTTTCTTCTTAAAAAGAAAAAGGCAAAAAGAGAGGAGGTTTTATTTGTACAATCGCTTCCTACCAACTGTTCTTTCAGCCTTCAGGTAATTAATTCTCTCGAATTGAGATCCCTGACTTCCTTTACTGCTGCTCTTTTCTTTTTTTTTTCAGTATCTTAAAAATCTCCATTATTTCATCCTCACTCTCTTGTTAAATCATGAATCTAGTTTCTTTTATTCTTCTAATCTTTTTTGTGCTTTCTTTGTTCATCAAGGTCAATAAATCTCTTTCTTCAGCAGATTGCAAATTTATAGTATAACTTTTACATATTGTTCCATAAATGTCTCTGGTGCAGAAGGTATTCCGATCTTCGATATGTATGTTCAGATCATTCGTCCTAGATCCATACAGAAAATTAATTTTAGTCTGTTAGAACCACCAGATTTCTATGCTGATCAACATCATCATGAACTTTAAATTTTAGAATAAAACAAGTAGGAAATTTGAGAACCTCGTTAAAAGTTAGAACCCTTATTGTTGGACACTTATCCTATGTGTCTTTTGCCGCTTGTGCTGCCCTGAGGCCCCATGGAGCGAATCGTTAGTATCTCTGCTGCTGTAATATGTATTAGCTTTTGACTTCCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCACAATGAACGTCGGAGAAAGCCTCAGATGGCTATCAACTCTGGCAGGGCTGGGAGGTTTCTTCAGCCATATAATGGTATCAAAACTGCACCATCCCTTTCAATCTCCCTTTTCATATACTTGCTGCATATGTGTGTTGGTGTGCGCTTTATGAAAGCATTAAAATTATTTTTTATTTGTGGTTTTGGCTTCCCCTCATGTTTTTGGCACCTATGATGTTATTGTTGTCCCATTGGTATTTCATATAGTATGCATCTTTTTAAATATTTCATTTTCTGTTCTTTATATACACCTAGATCTATGATGATGTATGCAGAAAGTTGGTTTAAATAGCCAATGTTTGCCAAATTTTGACAAAAAACTTTTTTTTTTTTTTGTTTTTTGGTCTTATCAAGAGAAGCAAAAGGCTTAGTTTAGTTTCTGAGTGCTGCACCTTTATTTAGAATATGATGCTTTTATTGATATGCAAAATGAAATTATCCATAAATTGAGATATTTCATTTTTGACATGCAAAAACTTCCAATTTACAGTTACTATAATTATAAATCAACTACATGGGGGTTGAACCACCATAAATACCTCCAAAAAATTCATCAAATTGAACTGTGTCTTTCTACTGTCAAATAATTTTTCCAAATAGAAGCCGCGTGATGAAATCAAAAGAGCTCTGACAATTGAAACTTATGGCTTGCGCTTGAAATATCCTTTTTTCTCTGTCAACTTCTTTCTCTGGTGCTGATGTGATGAGATCCATGGCAGCAAAGATTTTTATTTTTAACAGCTGATTTTGATGGATATGAATGGTCAAACTTATAAAACATCTACAACTAAGGTCCTGTTTGATAACTATTTTATTTTTGGTTTTCTATTTTTGAAAATTAAGGTTACAACTGCTACTTCCACCTATGTATTACTTTGTCTTATTATCAATTTTTTAAAAACGTTTTCAAAATCTAAGCCAATTTTTTGGAAGAAAAAAAAATAGTTTCCAAAAACTTATTTTTGTTTTTAAAATTTGGCTAAAAATTCAAATGTGATATGAAAAAATGTGAAAAAACATGCTCAAGAATTGTGAGAAAAAAAATATTATTGGGTCTAAGTTATTGACTTCCTAAATTTGAATTATCAAATGTTGGTGGAGGGGCCATTGGTTTCTGCTCTCTCTGGCATACAAGTTACCTACTTTGTTTCAAGTTCACCAACTTACCTAAGACCTCTATATACTCCTTTCCAATTCATGATTCTTGATTTTGTATTTTGTTCTTGAAACATGAATAATTTCTATGCTTATTATTTTAGTATTAGTGTTCCAGACTTCCAGTCATCAATTTTCTGTGGTCGTGTAATCGTTAAAGTAAATTTCAGGTAGCAGGCTTCAAGGAACGACATTAACTGCAACATCCTTTATCTGCCAAGAGATACTACCTAATGGTCTTTTGCATCCTGAGAAGTATGGAACAAATGATTGGTGTAGGAATGTGAAAATTGAAGACAAGAATGAATATATGCCTTTGTCTGCTGTTCATGTTCCTAGTGGCCACCTGCCTTCGAAATCCCTCTTCTCTCCTTACGATATCGAAACTCAAATTCCCCCTTTTCACGACAATGGACCGAGTGCAGCTACTGGAAATATGTTCAAGGAGAACAGTAATCAGTATCCTGTTAGTGTAGGAGGTGTGAATTCCAGTGCCCGTTCTTTCTTTAACAATGCCTCATTAGGCAGTGAATACTTCAGTGTTTATAGTGCAGCATCAACCGACCGAATATCAGGACTATCCGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCTGGGATTCCAATCGCTCGTCCTCTGGTCTTGCTTGATGGCCAAAACCACTACAACATGAATCAACTTTCTGAAAAGCTGATGGGAGTAAGCTCCCAGGTTTCTGTGAGTGGAGTGTCAAATAAATTCAATTCATCAGGGTTGAATGCTTCAGAAGGTTTTACCCTTGGTCCCATACTAACACCTGAAACAAGTGATGCAGTAAATTTTGAAATTACAAATCGGATTTTCCATGGGTCAAATTTGGCAGATCCTAGTGAAGGCAGCCCGACCATTGACTTGTTGCAGCTATCATCGCAACTTCAGCGTGTCGAGCACCAGAGGCAAGCTATGCAGGTGAAACAAGAAAGTAATGCTTTTTGCTGCCTCCGGATCACT

mRNA sequence

ATGGAGTCTTGGAGTTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAAATGAATTCACCTACTAGTTCGCTTGCAAGAAATAAAGACTCTTTGTTGGGCTGGGAATTCAAAAATCCCTGCAACTTTGGTGGCGCTATGTTAGCAACGGGTCAACAAGTCGACAATCACGGTTTCGGGGAACTTGTTTTCCCGGAAATGAGTGGGAAACAGTTACCTGACAATTCAGTTTGTGATATTCTGAATAGCAAGGTTGCTGGGGGAAGATTTCTGAATCCAACTATGAATTCCTCCAATGCATTTCTGGGAGAGGACGAATCCACTTCAAAGCTCTCGGGCTCTATTTTGGACTCGAGCAGCCGAGATTCGTCGTTCATTGATTTAAAGCTGGGGAGATTTGCTGACCAAAGGGATGCTCATGGCTACAAATTTTTGAAGGGAGCCCCCATTTTATCTTCTTCTGAGTCATCGATGCCTTCGAAAAGGGTACGAGCTTCGGGGTTGAATTCTCAAACTTATTTCTGTCAAGTTTATGGCTGTAATAAGGATCTCAGCTCCTCTAAAGATTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGAATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCACAATGAACGTCGGAGAAAGCCTCAGATGGCTATCAACTCTGGCAGGGCTGGGAGGTTTCTTCAGCCATATAATGGTAGCAGGCTTCAAGGAACGACATTAACTGCAACATCCTTTATCTGCCAAGAGATACTACCTAATGGTCTTTTGCATCCTGAGAAGTATGGAACAAATGATTGGTGTAGGAATGTGAAAATTGAAGACAAGAATGAATATATGCCTTTGTCTGCTGTTCATGTTCCTAGTGGCCACCTGCCTTCGAAATCCCTCTTCTCTCCTTACGATATCGAAACTCAAATTCCCCCTTTTCACGACAATGGACCGAGTGCAGCTACTGGAAATATGTTCAAGGAGAACAGTAATCAGTATCCTGTTAGTGTAGGAGGTGTGAATTCCAGTGCCCGTTCTTTCTTTAACAATGCCTCATTAGGCAGTGAATACTTCAGTGTTTATAGTGCAGCATCAACCGACCGAATATCAGGACTATCCGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCTGGGATTCCAATCGCTCGTCCTCTGGTCTTGCTTGATGGCCAAAACCACTACAACATGAATCAACTTTCTGAAAAGCTGATGGGAGTAAGCTCCCAGGTTTCTGTGAGTGGAGTGTCAAATAAATTCAATTCATCAGGGTTGAATGCTTCAGAAGGTTTTACCCTTGGTCCCATACTAACACCTGAAACAAGTGATGCAGTAAATTTTGAAATTACAAATCGGATTTTCCATGGGTCAAATTTGGCAGATCCTAGTGAAGGCAGCCCGACCATTGACTTGTTGCAGCTATCATCGCAACTTCAGCGTGTCGAGCACCAGAGGCAAGCTATGCAGGTGAAACAAGAAAGTAATGCTTTTTGCTGCCTCCGGATCACT

Coding sequence (CDS)

ATGGAGTCTTGGAGTTATGTTTCTGAAGGAAAGGGATGTATGTCTGATGAAATGAATTCACCTACTAGTTCGCTTGCAAGAAATAAAGACTCTTTGTTGGGCTGGGAATTCAAAAATCCCTGCAACTTTGGTGGCGCTATGTTAGCAACGGGTCAACAAGTCGACAATCACGGTTTCGGGGAACTTGTTTTCCCGGAAATGAGTGGGAAACAGTTACCTGACAATTCAGTTTGTGATATTCTGAATAGCAAGGTTGCTGGGGGAAGATTTCTGAATCCAACTATGAATTCCTCCAATGCATTTCTGGGAGAGGACGAATCCACTTCAAAGCTCTCGGGCTCTATTTTGGACTCGAGCAGCCGAGATTCGTCGTTCATTGATTTAAAGCTGGGGAGATTTGCTGACCAAAGGGATGCTCATGGCTACAAATTTTTGAAGGGAGCCCCCATTTTATCTTCTTCTGAGTCATCGATGCCTTCGAAAAGGGTACGAGCTTCGGGGTTGAATTCTCAAACTTATTTCTGTCAAGTTTATGGCTGTAATAAGGATCTCAGCTCCTCTAAAGATTACCACAAGAGGCATAAAGTTTGTGAAGTTCACTCAAAGACTGCAAAAGTTATTGTGAATGGAATAGAACAAAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGTCACAATGAACGTCGGAGAAAGCCTCAGATGGCTATCAACTCTGGCAGGGCTGGGAGGTTTCTTCAGCCATATAATGGTAGCAGGCTTCAAGGAACGACATTAACTGCAACATCCTTTATCTGCCAAGAGATACTACCTAATGGTCTTTTGCATCCTGAGAAGTATGGAACAAATGATTGGTGTAGGAATGTGAAAATTGAAGACAAGAATGAATATATGCCTTTGTCTGCTGTTCATGTTCCTAGTGGCCACCTGCCTTCGAAATCCCTCTTCTCTCCTTACGATATCGAAACTCAAATTCCCCCTTTTCACGACAATGGACCGAGTGCAGCTACTGGAAATATGTTCAAGGAGAACAGTAATCAGTATCCTGTTAGTGTAGGAGGTGTGAATTCCAGTGCCCGTTCTTTCTTTAACAATGCCTCATTAGGCAGTGAATACTTCAGTGTTTATAGTGCAGCATCAACCGACCGAATATCAGGACTATCCGACTCCGGTTGTGCTCTCTCTCTTCTGTCATCTCAAACACAAAACTCCTCAACTCATTCATCTGGGATTCCAATCGCTCGTCCTCTGGTCTTGCTTGATGGCCAAAACCACTACAACATGAATCAACTTTCTGAAAAGCTGATGGGAGTAAGCTCCCAGGTTTCTGTGAGTGGAGTGTCAAATAAATTCAATTCATCAGGGTTGAATGCTTCAGAAGGTTTTACCCTTGGTCCCATACTAACACCTGAAACAAGTGATGCAGTAAATTTTGAAATTACAAATCGGATTTTCCATGGGTCAAATTTGGCAGATCCTAGTGAAGGCAGCCCGACCATTGACTTGTTGCAGCTATCATCGCAACTTCAGCGTGTCGAGCACCAGAGGCAAGCTATGCAGGTGAAACAAGAAAGTAATGCTTTTTGCTGCCTCCGGATCACT

Protein sequence

MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFGELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSSRDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTNDWCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKENSNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNSSTHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTLGPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQESNAFCCLRIT

Homology

[Close]

BLAST of MS002050 vs. NCBI nr
Match: XP_022135375.1 (squamosa promoter-binding-like protein 6 isoform X1 [Momordica charantia] >XP_022135376.1 squamosa promoter-binding-like protein 6 isoform X1 [Momordica charantia] >XP_022135377.1 squamosa promoter-binding-like protein 6 isoform X1 [Momordica charantia])

HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 544/550 (98.91%), Postives = 548/550 (99.64%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG
Sbjct: 1   MESWSYVSEGKGCMSDEINSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEMSGKQLPDNSVCDIL+SKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSI+DSSS
Sbjct: 61  ELVFPEMSGKQLPDNSVCDILSSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQMAINSGRAGRFLQ YNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND
Sbjct: 241 GHNERRRKPQMAINSGRAGRFLQSYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGP+AATGNMFKEN
Sbjct: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPNAATGNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYPVSVGGVNSSARSFFNN SLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPVSVGGVNSSARSFFNNTSLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL
Sbjct: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of MS002050 vs. NCBI nr
Match: XP_038880590.1 (squamosa promoter-binding-like protein 6 [Benincasa hispida] >XP_038880591.1 squamosa promoter-binding-like protein 6 [Benincasa hispida])

HSP 1 Score: 1018.5 bits (2632), Expect = 2.2e-293
Identity = 508/550 (92.36%), Postives = 526/550 (95.64%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPC+FG  ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSNMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNPTMNSSNAFLGEDESTSKLSGSI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPTMNSSNAFLGEDESTSKLSGSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRD HGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDPHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGRAGRFLQ YNGSRLQGT LTATSFICQE+LPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRAGRFLQSYNGSRLQGTALTATSFICQELLPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVH+P GHL SK LFSPYDIETQ+PPFHDNGP+A+  NMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHLPIGHLHSKPLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNSS+RS+F+N SLGSEYFSV+SAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSSSRSYFHNPSLGSEYFSVFSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSS VSVSGVSNKFNSSGLNASEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSHVSVSGVSNKFNSSGLNASEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI T ETSDAVNFEITNRIFHGSNLADPSEG PTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPISTSETSDAVNFEITNRIFHGSNLADPSEGGPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of MS002050 vs. NCBI nr
Match: XP_004138332.1 (squamosa promoter-binding-like protein 6 [Cucumis sativus] >XP_011648639.1 squamosa promoter-binding-like protein 6 [Cucumis sativus] >KGN63774.1 hypothetical protein Csa_014035 [Cucumis sativus])

HSP 1 Score: 1015.4 bits (2624), Expect = 1.9e-292
Identity = 506/550 (92.00%), Postives = 524/550 (95.27%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPC+FG  ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNP MNSS AFLGEDESTSKLS SI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGR GRFLQ YNGSRLQGT LTATSFICQEILPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVHVPSGHL SKSLFSPYDIETQ+PPFHDNGP+A+  N+FKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNIFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNS++RS+F+N SLGSEYFSVYSAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSSQVSVSGVSNKFNSSGLN SEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLNTSEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI TPETSDAVNFEI+NRIFHGSNLADP EG PTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPISTPETSDAVNFEISNRIFHGSNLADPGEGGPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of MS002050 vs. NCBI nr
Match: XP_022135378.1 (squamosa promoter-binding-like protein 6 isoform X2 [Momordica charantia])

HSP 1 Score: 1008.4 bits (2606), Expect = 2.3e-290
Identity = 513/550 (93.27%), Postives = 517/550 (94.00%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG
Sbjct: 1   MESWSYVSEGKGCMSDEINSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEMSGKQLPDNSVCDIL+SKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSI+DSSS
Sbjct: 61  ELVFPEMSGKQLPDNSVCDILSSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQMAINSGRAGRFLQ YNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND
Sbjct: 241 GHNERRRKPQMAINSGRAGRFLQSYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGP+AATGNMFKEN
Sbjct: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPNAATGNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYPVSVGGVNSSARSFFNN SLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPVSVGGVNSSARSFFNNTSLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASE    
Sbjct: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASE---- 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
                                      DPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 ---------------------------DPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 519

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 519

[Close]

BLAST of MS002050 vs. NCBI nr
Match: XP_008453304.1 (PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453305.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453306.1 PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >KAA0058011.1 squamosa promoter-binding-like protein 6 [Cucumis melo var. makuwa] >TYJ98234.1 squamosa promoter-binding-like protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 1000.7 bits (2586), Expect = 4.8e-288
Identity = 501/550 (91.09%), Postives = 521/550 (94.73%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFK+PC+F   ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNP MNSS AFLGEDESTSKLS SI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RD  FIDLKLGRFADQRD HGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGR GRFLQ YNGSRLQGT LTATSFICQEILPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVHVPSGHL SKSLFSPYDIETQ+PPFHDNGP+A+  NMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNS++RS+F+N SLGSEYF+VYSAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSSQVSVSGVSNKF+SSGLN SEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLNTSEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI TPETSDAVNFEI+NRIFHGSNLADP EGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPIPTPETSDAVNFEISNRIFHGSNLADPGEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 549

[Close]

BLAST of MS002050 vs. ExPASy Swiss-Prot
Match: Q94JW8 (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6 PE=1 SV=2)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-40
Identity = 105/222 (47.30%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 79  DILNSKVAGGRFLNPTMNSSNAF--------LGEDESTSKLSGSILDSSSRDSSFIDLKL 138
           D+L S +AG         +SN F        + E+E    +S S    SS++ + ID KL
Sbjct: 38  DVLISDMAG---------NSNGFSAVSITKVVPEEEDEENISSS-SKFSSQELNRIDFKL 97

Query: 139 GRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDY 198
             F D  +             SS   ++PSK+ RAS L SQ   CQVYGC+KDLSSSKDY
Sbjct: 98  RSFLDLGN--------DDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDY 157

Query: 199 HKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 258
           HKRH+VCE HSKT+ VIVNG+EQRFCQQCSRFH L+EFDDGKRSCR+RLAGHNERRRKP 
Sbjct: 158 HKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPA 217

Query: 259 MAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLH 293
                G+  + L+  +   +    L  +S +  E  P  LL+
Sbjct: 218 FYFLPGKRHKLLRT-SQDVVGNKFLENSSLVLPESFPGSLLY 240

[Close]

BLAST of MS002050 vs. ExPASy Swiss-Prot
Match: A2X0Q6 (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=SPL3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.0e-32
Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 104 EDESTSKLSGSILDSSSRDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMP--SK 163
           +D  TS+   S + +++R    I LKLG+     D  G + +K +P   S  +  P  +K
Sbjct: 112 DDTGTSR---SPVVAANRVEPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAK 171

Query: 164 RVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 223
           +V+ +  N+Q   CQV GCN DLSS+K YH++H+VCE HSKT KVIV G+E+RFCQQCSR
Sbjct: 172 KVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSR 231

Query: 224 FHLLAEFDDGKRSCRKRLAGHNERRRKPQ---MAINSGRAGRFLQPYNGSRLQGTTL 276
           FH LAEFD  KRSCR+RL  HN RRRKPQ   ++++S R    L  Y  +R Q + L
Sbjct: 232 FHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLSTLL--YGDARQQASFL 283

[Close]

BLAST of MS002050 vs. ExPASy Swiss-Prot
Match: A3A2Z8 (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.0e-32
Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 104 EDESTSKLSGSILDSSSRDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMP--SK 163
           +D  TS+   S + +++R    I LKLG+     D  G + +K +P   S  +  P  +K
Sbjct: 112 DDTGTSR---SPVVAANRVEPLIGLKLGKRTYFEDVCGGQNVKSSPSGVSVATPSPGLAK 171

Query: 164 RVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSR 223
           +V+ +  N+Q   CQV GCN DLSS+K YH++H+VCE HSKT KVIV G+E+RFCQQCSR
Sbjct: 172 KVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFCQQCSR 231

Query: 224 FHLLAEFDDGKRSCRKRLAGHNERRRKPQ---MAINSGRAGRFLQPYNGSRLQGTTL 276
           FH LAEFD  KRSCR+RL  HN RRRKPQ   ++++S R    L  Y  +R Q + L
Sbjct: 232 FHGLAEFDQKKRSCRRRLHDHNARRRKPQPEAISLSSSRLSTLL--YGDARQQASFL 283

[Close]

BLAST of MS002050 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-31
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 104 EDESTSKLSGSIL---DSSSRDSSFIDLKLGR--------FADQRDAHGYKFLKGAPILS 163
           ++   S + GSI     S S+     DLKLGR        F D          K + +  
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 164 SSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNG 223
              S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 224 IEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRL 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F   + GS+L
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKL 195

[Close]

BLAST of MS002050 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-31
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 104 EDESTSKLSGSIL---DSSSRDSSFIDLKLGR--------FADQRDAHGYKFLKGAPILS 163
           ++   S + GSI     S S+     DLKLGR        F D          K + +  
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 164 SSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNG 223
              S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 224 IEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRL 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F   + GS+L
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKL 195

[Close]

BLAST of MS002050 vs. ExPASy TrEMBL
Match: A0A6J1C0X9 (squamosa promoter-binding-like protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007341 PE=4 SV=1)

HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 544/550 (98.91%), Postives = 548/550 (99.64%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG
Sbjct: 1   MESWSYVSEGKGCMSDEINSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEMSGKQLPDNSVCDIL+SKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSI+DSSS
Sbjct: 61  ELVFPEMSGKQLPDNSVCDILSSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQMAINSGRAGRFLQ YNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND
Sbjct: 241 GHNERRRKPQMAINSGRAGRFLQSYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGP+AATGNMFKEN
Sbjct: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPNAATGNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYPVSVGGVNSSARSFFNN SLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPVSVGGVNSSARSFFNNTSLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL
Sbjct: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of MS002050 vs. ExPASy TrEMBL
Match: A0A0A0LRX6 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE=4 SV=1)

HSP 1 Score: 1015.4 bits (2624), Expect = 9.1e-293
Identity = 506/550 (92.00%), Postives = 524/550 (95.27%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPC+FG  ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNP MNSS AFLGEDESTSKLS SI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGR GRFLQ YNGSRLQGT LTATSFICQEILPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVHVPSGHL SKSLFSPYDIETQ+PPFHDNGP+A+  N+FKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNIFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNS++RS+F+N SLGSEYFSVYSAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSSQVSVSGVSNKFNSSGLN SEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLNTSEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI TPETSDAVNFEI+NRIFHGSNLADP EG PTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPISTPETSDAVNFEISNRIFHGSNLADPGEGGPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 550

[Close]

BLAST of MS002050 vs. ExPASy TrEMBL
Match: A0A6J1C4M9 (squamosa promoter-binding-like protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007341 PE=4 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.1e-290
Identity = 513/550 (93.27%), Postives = 517/550 (94.00%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDE+NSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG
Sbjct: 1   MESWSYVSEGKGCMSDEINSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEMSGKQLPDNSVCDIL+SKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSI+DSSS
Sbjct: 61  ELVFPEMSGKQLPDNSVCDILSSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQMAINSGRAGRFLQ YNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND
Sbjct: 241 GHNERRRKPQMAINSGRAGRFLQSYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGP+AATGNMFKEN
Sbjct: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPNAATGNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYPVSVGGVNSSARSFFNN SLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPVSVGGVNSSARSFFNNTSLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASE    
Sbjct: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASE---- 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
                                      DPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 ---------------------------DPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 519

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 519

[Close]

BLAST of MS002050 vs. ExPASy TrEMBL
Match: A0A1S3BVC8 (squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 2.3e-288
Identity = 501/550 (91.09%), Postives = 521/550 (94.73%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFK+PC+F   ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNP MNSS AFLGEDESTSKLS SI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RD  FIDLKLGRFADQRD HGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGR GRFLQ YNGSRLQGT LTATSFICQEILPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVHVPSGHL SKSLFSPYDIETQ+PPFHDNGP+A+  NMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNS++RS+F+N SLGSEYF+VYSAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSSQVSVSGVSNKF+SSGLN SEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLNTSEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI TPETSDAVNFEI+NRIFHGSNLADP EGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPIPTPETSDAVNFEISNRIFHGSNLADPGEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 549

[Close]

BLAST of MS002050 vs. ExPASy TrEMBL
Match: A0A5D3BGM2 (Squamosa promoter-binding-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00060 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 2.3e-288
Identity = 501/550 (91.09%), Postives = 521/550 (94.73%), Query Frame = 0


Query: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCNFGGAMLATGQQVDNHGFG 60
           MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFK+PC+F   ML T QQVDN GFG
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPTSQQVDNQGFG 60

Query: 61  ELVFPEMSGKQLPDNSVCDILNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSS 120
           ELVFPEM GKQLPDNSVCDIL+SKV GGRFLNP MNSS AFLGEDESTSKLS SI+DSSS
Sbjct: 61  ELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDSSS 120

Query: 121 RDSSFIDLKLGRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180
           RD  FIDLKLGRFADQRD HGYKF KGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC
Sbjct: 121 RD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGC 180

Query: 181 NKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240
           NKDLSS KDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA
Sbjct: 181 NKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLA 240

Query: 241 GHNERRRKPQMAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLHPEKYGTND 300
           GHNERRRKPQ+AINSGR GRFLQ YNGSRLQGT LTATSFICQEILPNGLLHPEKYGT+D
Sbjct: 241 GHNERRRKPQVAINSGRTGRFLQSYNGSRLQGTALTATSFICQEILPNGLLHPEKYGTSD 300

Query: 301 WCRNVKIEDKNEYMPLSAVHVPSGHLPSKSLFSPYDIETQIPPFHDNGPSAATGNMFKEN 360
           WCR VKIEDKNEYMPLSAVHVPSGHL SKSLFSPYDIETQ+PPFHDNGP+A+  NMFKEN
Sbjct: 301 WCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASATNMFKEN 360

Query: 361 SNQYPVSVGGVNSSARSFFNNASLGSEYFSVYSAASTDRISGLSDSGCALSLLSSQTQNS 420
           SNQYP+SVGGVNS++RS+F+N SLGSEYF+VYSAASTDR+SGLSDSGCALSLLSSQTQNS
Sbjct: 361 SNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAASTDRLSGLSDSGCALSLLSSQTQNS 420

Query: 421 STHSSGIPIARPLVLLDGQNHYNMNQLSEKLMGVSSQVSVSGVSNKFNSSGLNASEGFTL 480
           STHSSGIPI RPLVLLDGQNHY+M+QLSEKLMGVSSQVSVSGVSNKF+SSGLN SEG TL
Sbjct: 421 STHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLNTSEGCTL 480

Query: 481 GPILTPETSDAVNFEITNRIFHGSNLADPSEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540
           GPI TPETSDAVNFEI+NRIFHGSNLADP EGSPTIDLLQLSSQLQRVEHQRQAMQVKQE
Sbjct: 481 GPIPTPETSDAVNFEISNRIFHGSNLADPGEGSPTIDLLQLSSQLQRVEHQRQAMQVKQE 540

Query: 541 SNAFCCLRIT 551
           SNAFCCLRIT
Sbjct: 541 SNAFCCLRIT 549

[Close]

BLAST of MS002050 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 169.5 bits (428), Expect = 7.7e-42
Identity = 105/222 (47.30%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 79  DILNSKVAGGRFLNPTMNSSNAF--------LGEDESTSKLSGSILDSSSRDSSFIDLKL 138
           D+L S +AG         +SN F        + E+E    +S S    SS++ + ID KL
Sbjct: 38  DVLISDMAG---------NSNGFSAVSITKVVPEEEDEENISSS-SKFSSQELNRIDFKL 97

Query: 139 GRFADQRDAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDY 198
             F D  +             SS   ++PSK+ RAS L SQ   CQVYGC+KDLSSSKDY
Sbjct: 98  RSFLDLGN--------DDDDTSSRGFALPSKKSRASNLCSQNPLCQVYGCSKDLSSSKDY 157

Query: 199 HKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 258
           HKRH+VCE HSKT+ VIVNG+EQRFCQQCSRFH L+EFDDGKRSCR+RLAGHNERRRKP 
Sbjct: 158 HKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKPA 217

Query: 259 MAINSGRAGRFLQPYNGSRLQGTTLTATSFICQEILPNGLLH 293
                G+  + L+  +   +    L  +S +  E  P  LL+
Sbjct: 218 FYFLPGKRHKLLRT-SQDVVGNKFLENSSLVLPESFPGSLLY 240

[Close]

BLAST of MS002050 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-32
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 104 EDESTSKLSGSIL---DSSSRDSSFIDLKLGR--------FADQRDAHGYKFLKGAPILS 163
           ++   S + GSI     S S+     DLKLGR        F D          K + +  
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 164 SSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNG 223
              S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 224 IEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRL 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F   + GS+L
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKL 195

[Close]

BLAST of MS002050 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-32
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 104 EDESTSKLSGSIL---DSSSRDSSFIDLKLGR--------FADQRDAHGYKFLKGAPILS 163
           ++   S + GSI     S S+     DLKLGR        F D          K + +  
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 164 SSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNG 223
              S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 224 IEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRL 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F   + GS+L
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKL 195

[Close]

BLAST of MS002050 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-32
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 104 EDESTSKLSGSIL---DSSSRDSSFIDLKLGR--------FADQRDAHGYKFLKGAPILS 163
           ++   S + GSI     S S+     DLKLGR        F D          K + +  
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 164 SSES-SMPSKRVRASGL-NSQTYFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNG 223
              S S  SKR R +G+  +Q   C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 224 IEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGRAGRFLQPYNGSRL 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   + GR   F   + GS+L
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGSKL 195

[Close]

BLAST of MS002050 vs. TAIR 10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2 )

HSP 1 Score: 136.7 bits (343), Expect = 5.5e-32
Identity = 82/180 (45.56%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 81  LNSKVAGGRFLNPTMNSSNAFLGEDESTSKLSGSILDSSSRDSSFIDLKLGR---FADQR 140
           ++S  A  R  N T  +  +  GE       S S+  S       + LKLG+   F D  
Sbjct: 73  ISSSSAEVRTHNFTSETGESLPGEFAKGIDTSPSLELSFGSGDPVLGLKLGKRTYFEDFW 132

Query: 141 DAHGYKFLKGAPILSSSESSMPSKRVRASGLNSQTYFCQVYGCNKDLSSSKDYHKRHKVC 200
           +    K L G P+  +S S  P K+ ++     QT  CQV GCN DLSS+KDYH++H++C
Sbjct: 133 EVENAKGL-GLPVTLASSSVSPVKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRIC 192

Query: 201 EVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQMAINSGR 258
           E HSK  KV+V+G+E+RFCQQCSRFH L+EFD+ KRSCR+RL+ HN RRRKP    N GR
Sbjct: 193 ENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKP----NPGR 247

The following BLAST results are available for this feature:

BLAST of MS002050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135375.1	0.0e+00	98.91	squamosa promoter-binding-like protein 6 isoform X1 [Momordica charantia] >XP_02...	[more]
XP_038880590.1	2.2e-293	92.36	squamosa promoter-binding-like protein 6 [Benincasa hispida] >XP_038880591.1 squ...	[more]
XP_004138332.1	1.9e-292	92.00	squamosa promoter-binding-like protein 6 [Cucumis sativus] >XP_011648639.1 squam...	[more]
XP_022135378.1	2.3e-290	93.27	squamosa promoter-binding-like protein 6 isoform X2 [Momordica charantia]	[more]
XP_008453304.1	4.8e-288	91.09	PREDICTED: squamosa promoter-binding-like protein 6 [Cucumis melo] >XP_008453305...	[more]

BLAST of MS002050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JW8	1.1e-40	47.30	Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6...	[more]
A2X0Q6	7.0e-32	47.46	Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica OX=39946 ...	[more]
A3A2Z8	7.0e-32	47.46	Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica OX=3994...	[more]
B9DI20	1.6e-31	46.67	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	1.6e-31	46.67	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of MS002050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0X9	0.0e+00	98.91	squamosa promoter-binding-like protein 6 isoform X1 OS=Momordica charantia OX=36...	[more]
A0A0A0LRX6	9.1e-293	92.00	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE...	[more]
A0A6J1C4M9	1.1e-290	93.27	squamosa promoter-binding-like protein 6 isoform X2 OS=Momordica charantia OX=36...	[more]
A0A1S3BVC8	2.3e-288	91.09	squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063...	[more]
A0A5D3BGM2	2.3e-288	91.09	Squamosa promoter-binding-like protein 6 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MS002050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69170.1	7.7e-42	47.30	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.1	1.1e-32	46.67	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	1.1e-32	46.67	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	1.1e-32	46.67	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G43270.2	5.5e-32	45.56	squamosa promoter binding protein-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 518..538
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR31251:SF77	1 PROTEIN, PUTATIVE-RELATED	coord: 42..550
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 175..248 e-value: 1.1E-31 score: 109.0
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 172..249 score: 32.342278
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 166..236 e-value: 3.0E-33 score: 115.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 173..252
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 42..550

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002050.1	MS002050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding