MS002041 (gene) Bitter gourd (TR) v1

Overview


Name	MS002041
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor TCP5-like
Location	scaffold30: 1975357 .. 1976334 (+)
RNA-Seq Expression	MS002041
Synteny	MS002041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAAGGGTTGTGAAGCAAAACAAGAGGGAATTATTGATGGAAAATACAGTTTTCCCAAGGCTCCCACAAGTTCTAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGCACAATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTACCAACAGCAATTCAGCTCTATGATCTTCAAGACAAGCTCAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTCCTCGACGTCACTAAGCTCGATATCGACAAGCTCCCCCCGCTCCAAATCCCGGCAGGGTTCTCTCAATTTCACCACCCGATGTCGTTGTTCCCAGCTCAATATGATTATTCTAGTTCTTCTTCTTCACAGTTTTGTTCGCTCCCTCATCCCTTTGCTGTTGACACGAAGGATTCAACGACGACGCATCTGAATCAGACAACGATGGAGAAAACGAAGCTTTGGGATACGGATTTAGTACCGCAAGAGAAAGCATCTTTGGCGACGAAAGGGAAGTGGATTGATCATGGAAGTAACAGCCAGCAAGTGGAAGATTATAATGAGCAAATTTCAGCTCAAAAGTTCATCTCAATAAACAATTATTCTAATTCTTACCATTACAATACTTGTGATCATCAGCATTCACAATTTGGGAACAATAATAATGGAGTTTTTCCATCACAAGTTGAGGCCCAAACAAGTTCTTCTTCTGGGTCTGCCCTATTCTTCACTCCCTATGCTTCATATATCACCAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCACATGCTTTGCCCAATCCCTTCATGCCTCCCAATTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCAGCAAACTTCAACCTGAAGCAGCTGCTTCACGATGGCGGTTCCGGTAAAGACGGGGCGGACGGGAACTCG

mRNA sequence

AAAGAAAAGGGTTGTGAAGCAAAACAAGAGGGAATTATTGATGGAAAATACAGTTTTCCCAAGGCTCCCACAAGTTCTAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGCACAATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTACCAACAGCAATTCAGCTCTATGATCTTCAAGACAAGCTCAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTCCTCGACGTCACTAAGCTCGATATCGACAAGCTCCCCCCGCTCCAAATCCCGGCAGGGTTCTCTCAATTTCACCACCCGATGTCGTTGTTCCCAGCTCAATATGATTATTCTAGTTCTTCTTCTTCACAGTTTTGTTCGCTCCCTCATCCCTTTGCTGTTGACACGAAGGATTCAACGACGACGCATCTGAATCAGACAACGATGGAGAAAACGAAGCTTTGGGATACGGATTTAGTACCGCAAGAGAAAGCATCTTTGGCGACGAAAGGGAAGTGGATTGATCATGGAAGTAACAGCCAGCAAGTGGAAGATTATAATGAGCAAATTTCAGCTCAAAAGTTCATCTCAATAAACAATTATTCTAATTCTTACCATTACAATACTTGTGATCATCAGCATTCACAATTTGGGAACAATAATAATGGAGTTTTTCCATCACAAGTTGAGGCCCAAACAAGTTCTTCTTCTGGGTCTGCCCTATTCTTCACTCCCTATGCTTCATATATCACCAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCACATGCTTTGCCCAATCCCTTCATGCCTCCCAATTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCAGCAAACTTCAACCTGAAGCAGCTGCTTCACGATGGCGGTTCCGGTAAAGACGGGGCGGACGGGAACTCG

Coding sequence (CDS)

AAAGAAAAGGGTTGTGAAGCAAAACAAGAGGGAATTATTGATGGAAAATACAGTTTTCCCAAGGCTCCCACAAGTTCTAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGCACAATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTACCAACAGCAATTCAGCTCTATGATCTTCAAGACAAGCTCAAACTTGGGCAGCCTAGCAAGGTCATAGATTGGCTCCTCGACGTCACTAAGCTCGATATCGACAAGCTCCCCCCGCTCCAAATCCCGGCAGGGTTCTCTCAATTTCACCACCCGATGTCGTTGTTCCCAGCTCAATATGATTATTCTAGTTCTTCTTCTTCACAGTTTTGTTCGCTCCCTCATCCCTTTGCTGTTGACACGAAGGATTCAACGACGACGCATCTGAATCAGACAACGATGGAGAAAACGAAGCTTTGGGATACGGATTTAGTACCGCAAGAGAAAGCATCTTTGGCGACGAAAGGGAAGTGGATTGATCATGGAAGTAACAGCCAGCAAGTGGAAGATTATAATGAGCAAATTTCAGCTCAAAAGTTCATCTCAATAAACAATTATTCTAATTCTTACCATTACAATACTTGTGATCATCAGCATTCACAATTTGGGAACAATAATAATGGAGTTTTTCCATCACAAGTTGAGGCCCAAACAAGTTCTTCTTCTGGGTCTGCCCTATTCTTCACTCCCTATGCTTCATATATCACCAACCCATTTGAAAGCCACATCCATTTCTTGAGCTCAAATTCACATGCTTTGCCCAATCCCTTCATGCCTCCCAATTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCAGCAAACTTCAACCTGAAGCAGCTGCTTCACGATGGCGGTTCCGGTAAAGACGGGGCGGACGGGAACTCG

Protein sequence

KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPMSLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLKPFPANFNLKQLLHDGGSGKDGADGNS

Homology

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BLAST of MS002041 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 656.4 bits (1692), Expect = 1.3e-184
Identity = 325/326 (99.69%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKGCEAKQEGIIDGKYSFP+APTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGCEAKQEGIIDGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 125

Query: 121 SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA 180
           SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA
Sbjct: 126 SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA 185

Query: 181 TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ 240
           TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ
Sbjct: 186 TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ 245

Query: 241 VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK 300
           VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK
Sbjct: 246 VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK 305

Query: 301 PFPANFNLKQLLHDGGSGKDGADGNS 327
           PFPANFNLKQLLHDGGSGKDGADGNS
Sbjct: 306 PFPANFNLKQLLHDGGSGKDGADGNS 331

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BLAST of MS002041 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.3 bits (1035), Expect = 2.0e-108
Identity = 242/342 (70.76%), Postives = 257/342 (75.15%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYDY--------SSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDL 180
            LFP  YD+        SSSSSSQFC SLP PFAVD K       + T +EKTK+WD DL
Sbjct: 126 -LFP-PYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKG------DSTAIEKTKIWDMDL 185

Query: 181 VPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGN 240
             Q KAS  TKGKW+D GS++Q VEDYN       F   N Y++           SQFG 
Sbjct: 186 ALQGKASSLTKGKWVD-GSSNQHVEDYN-------FTPYNTYNS-----------SQFG- 245

Query: 241 NNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPL 300
           NNNGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSN HAL NPF+P  S L
Sbjct: 246 NNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVP--SAL 305

Query: 301 QPFGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 327
            PF SQNLKPF  A+FN KQLLH  DG     S KDGA G+S
Sbjct: 306 HPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 313

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BLAST of MS002041 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 402.1 bits (1032), Expect = 4.5e-108
Identity = 240/340 (70.59%), Postives = 258/340 (75.88%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYD------YSSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVP 180
             FP   D      +SSSSSSQFC SLP PFAV+ K  +++    T +EKTK+WD DL  
Sbjct: 126 -FFPPYDDQHHHHHHSSSSSSQFCNSLPPPFAVNVKGDSSS----TAVEKTKIWDMDLAL 185

Query: 181 QEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNN 240
           Q KAS  TKGKWID GS++Q VEDYN       F   N+Y++           SQFG NN
Sbjct: 186 QGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNSYNS-----------SQFG-NN 245

Query: 241 NGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQP 300
           NGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S L P
Sbjct: 246 NGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SALHP 305

Query: 301 FGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 327
           F SQNLKPF  A+FN KQLLH  DG     S KDGA G+S
Sbjct: 306 FASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 314

[Close]

BLAST of MS002041 vs. NCBI nr
Match: KAG7023291.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-107
Identity = 242/343 (70.55%), Postives = 256/343 (74.64%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYDY---------SSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTD 180
            LFP  YD+         SSSSSSQFC SLP PFAVD K          ++EKTK+WD D
Sbjct: 126 -LFP-PYDHHHHYSSSSSSSSSSSQFCNSLPLPFAVDMKGD--------SIEKTKIWDMD 185

Query: 181 LVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFG 240
           L  Q KAS  TKGKWID GS++Q VEDYN       F   N Y++           SQFG
Sbjct: 186 LALQGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNTYNS-----------SQFG 245

Query: 241 NNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSP 300
            NNNGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S 
Sbjct: 246 -NNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SA 305

Query: 301 LQPFGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 327
           L PF SQNLKPF  A+FN KQLLH  DG     S KDG  G+S
Sbjct: 306 LHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGTAGDS 312

[Close]

BLAST of MS002041 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-107
Identity = 240/342 (70.18%), Postives = 254/342 (74.27%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYDY--------SSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDL 180
            LFP  YD+        SSSSSSQFC SLP PFAVD K          ++EKTK+WD DL
Sbjct: 126 -LFP-PYDHHHHYSSSSSSSSSSQFCNSLPPPFAVDMKGD--------SIEKTKIWDMDL 185

Query: 181 VPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGN 240
             Q KAS  TKGKWID GS++Q VEDYN       F   N Y++           SQFG 
Sbjct: 186 ALQGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNTYNS-----------SQFG- 245

Query: 241 NNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPL 300
           NNNGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S L
Sbjct: 246 NNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SAL 305

Query: 301 QPFGSQNLKPF-PANFNLKQLLHDGG------SGKDGADGNS 327
            PF SQNLKPF  A+FN KQLLH         S KDG  G+S
Sbjct: 306 HPFASQNLKPFSAASFNFKQLLHAADANGADPSNKDGTAGDS 311

[Close]

BLAST of MS002041 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.4e-43
Identity = 125/273 (45.79%), Postives = 157/273 (57.51%), Query Frame = 0


Query: 20  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 79
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 80  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPMSLFPAQYDYSSSSSSQFC 139
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+Q  +P  +F       S SS+   
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQM-YPNLIFGNSGFGESPSSTTST 155

Query: 140 SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLATKGKWIDHGSNSQQVEDY 199
           + P     +        L  ++  + +L DT    +E   L  KGKWI +  NS Q    
Sbjct: 156 TFP---GTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDL-DKGKWIKNDENSNQDHQG 215

Query: 200 NEQISAQKFISINNYSN-SYHYNTCDHQHS--QFGNN----------NNGVFPSQVEAQT 259
                 Q+F   N Y+N S +YN    Q S  Q GNN          NN    +     +
Sbjct: 216 FNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPSS 275

Query: 260 SSSSGSALFFTPYASYITNPFESHIHFLSSNSH 279
           S+  GS LFF P    +++ F ++  FL ++ H
Sbjct: 276 SAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of MS002041 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.4e-33
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 15  GKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 74
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 75  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PAGFSQFHHPMS 122
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+H  S
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQS 150

[Close]

BLAST of MS002041 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 104/249 (41.77%), Postives = 130/249 (52.21%), Query Frame = 0


Query: 32  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 91
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 92  WLLDVTKLDIDKLPPLQIPAGFSQFHHPMS----LFPAQYDYSSSSSSQFCSLPHPFAVD 151
           WLL+V K D+D LPPLQ P GF Q +  ++     FP  +D                   
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLG----------------- 138

Query: 152 TKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQK- 211
                 T      +EK K  + D V             IDH ++      ++  I + K 
Sbjct: 139 -----RTQREALDLEKRKWVNLDHVFDH----------IDHHNH------FSNSIQSNKL 198

Query: 212 -FISINNYSNSYHYNTCDHQHS---QFGN---------NNNGVFPSQVEAQTSSSSGSAL 263
            F +I + S+SYHYN    Q S   Q GN         NNN + P   E        S+L
Sbjct: 199 YFPTITSSSSSYHYNLGHLQQSLLDQSGNVTVAFSNNYNNNNLNPPAAETM------SSL 223

[Close]

BLAST of MS002041 vs. ExPASy Swiss-Prot
Match: A2XMN1 (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-18
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 30  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 89
           +G    RI RV R+ GGKDRHSKV T +G+RDRR+RLSV TAIQ YDLQD+L   QPSK 
Sbjct: 37  TGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKA 96

Query: 90  IDWLLDVTKLDIDKLPPLQIPAGFSQFHH 119
           I+WL++     ID LP L  PA F+   H
Sbjct: 97  IEWLINAASPAIDTLPSLD-PAAFAAIPH 123

[Close]

BLAST of MS002041 vs. ExPASy Swiss-Prot
Match: Q10CE8 (Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-18
Identity = 51/89 (57.30%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 30  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 89
           +G    RI RV R+ GGKDRHSKV T +G+RDRR+RLSV TAIQ YDLQD+L   QPSK 
Sbjct: 37  TGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKA 96

Query: 90  IDWLLDVTKLDIDKLPPLQIPAGFSQFHH 119
           I+WL++     ID LP L  PA F+   H
Sbjct: 97  IEWLINAASPAIDTLPSLD-PAAFAAIPH 123

[Close]

BLAST of MS002041 vs. ExPASy TrEMBL
Match: A0A6J1C023 (transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 6.4e-185
Identity = 325/326 (99.69%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKGCEAKQEGIIDGKYSFP+APTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGCEAKQEGIIDGKYSFPRAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 125

Query: 121 SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA 180
           SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA
Sbjct: 126 SLFPAQYDYSSSSSSQFCSLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLA 185

Query: 181 TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ 240
           TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ
Sbjct: 186 TKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQ 245

Query: 241 VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK 300
           VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK
Sbjct: 246 VEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLK 305

Query: 301 PFPANFNLKQLLHDGGSGKDGADGNS 327
           PFPANFNLKQLLHDGGSGKDGADGNS
Sbjct: 306 PFPANFNLKQLLHDGGSGKDGADGNS 331

[Close]

BLAST of MS002041 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 2.2e-108
Identity = 240/340 (70.59%), Postives = 258/340 (75.88%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYD------YSSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVP 180
             FP   D      +SSSSSSQFC SLP PFAV+ K  +++    T +EKTK+WD DL  
Sbjct: 126 -FFPPYDDQHHHHHHSSSSSSQFCNSLPPPFAVNVKGDSSS----TAVEKTKIWDMDLAL 185

Query: 181 QEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNN 240
           Q KAS  TKGKWID GS++Q VEDYN       F   N+Y++           SQFG NN
Sbjct: 186 QGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNSYNS-----------SQFG-NN 245

Query: 241 NGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQP 300
           NGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S L P
Sbjct: 246 NGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SALHP 305

Query: 301 FGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 327
           F SQNLKPF  A+FN KQLLH  DG     S KDGA G+S
Sbjct: 306 FASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 314

[Close]

BLAST of MS002041 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.1e-107
Identity = 256/404 (63.37%), Postives = 277/404 (68.56%), Query Frame = 0


Query: 2   EKGCEAKQEGII---------DGKYSFPKAPT-SSRQWSGFRNPRIVRVSRSFGGKDRHS 61
           +KGCEAK+EG++         DGKYSFPKAPT SSRQWSGFRNPRIVRVSRSFGGKDRHS
Sbjct: 9   QKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHS 68

Query: 62  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPA 121
           KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID LPPLQIP 
Sbjct: 69  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPP 128

Query: 122 GFSQFHHPMSLFPAQYD-------------YSSSSSSQFC-SLPHPFAVDTKDSTTTHLN 181
           GFS FH  M LFP   D              SSSSSS+FC SLP PF +D K ST  +  
Sbjct: 129 GFSPFHQQM-LFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVK-STDAYQT 188

Query: 182 QTTMEKTKLWDTDL-VPQEKASLA------TKGKWIDHGSN----SQQVEDYNEQISAQK 241
             T+EKTKLWD DL V Q+KA  A      TKGKWID  +N    +QQVEDYNEQIS+QK
Sbjct: 189 TMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISSQK 248

Query: 242 FISI------------NNYSNSY-HYNTC-DHQH---------SQFGNNN--NGVFPSQV 301
            +S+            NN S  Y +YN+  DH H         SQFGNNN  NGVFPSQ+
Sbjct: 249 LLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNGVFPSQL 308

Query: 302 -----EAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFG- 327
                +   SSSS S+LFFTPYASYITNPFESHIHFLSSNSHAL NPFM  +S L PF  
Sbjct: 309 VETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFM--SSSLHPFAT 368

[Close]

BLAST of MS002041 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.1e-107
Identity = 241/343 (70.26%), Postives = 255/343 (74.34%), Query Frame = 0


Query: 1   KEKGCEAKQEGIIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 60
           KEKG E+K+E    GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR
Sbjct: 6   KEKGFESKEE----GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLR 65

Query: 61  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPM 120
           DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIP GFS FH  M
Sbjct: 66  DRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQM 125

Query: 121 SLFPAQYDY---------SSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTD 180
            LFP  YD+         SSSSSSQFC SLP PFAVD K          ++EKTK+WD D
Sbjct: 126 -LFP-PYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGD--------SIEKTKIWDMD 185

Query: 181 LVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFG 240
           L  Q KAS  TKGKWID GS++Q VEDYN       F   N Y++           SQFG
Sbjct: 186 LALQGKASSLTKGKWID-GSSNQHVEDYN-------FTPYNTYNS-----------SQFG 245

Query: 241 NNNNGVFPSQVEAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSP 300
            NNNGVFPSQ+EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S 
Sbjct: 246 -NNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SA 305

Query: 301 LQPFGSQNLKPF-PANFNLKQLLH--DGG----SGKDGADGNS 327
           L PF SQNLKPF  A+FN KQLLH  DG     S KDG  G+S
Sbjct: 306 LHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 312

[Close]

BLAST of MS002041 vs. ExPASy TrEMBL
Match: A0A6J1E2U7 (transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.7e-105
Identity = 234/332 (70.48%), Postives = 248/332 (74.70%), Query Frame = 0


Query: 12  IIDGKYSFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTA 71
           ++ GKY FPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTA
Sbjct: 1   MLKGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTA 60

Query: 72  IQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPMSLFPAQYDY-- 131
           IQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIP GFS FH  M LFP  YD+  
Sbjct: 61  IQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQM-LFP-PYDHHH 120

Query: 132 -------SSSSSSQFC-SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLAT 191
                  SSSSSSQFC SLP PFAVD K          ++EKTK+WD DL  Q KAS  T
Sbjct: 121 HYSSSSSSSSSSSQFCNSLPPPFAVDMKGD--------SIEKTKIWDMDLALQGKASSLT 180

Query: 192 KGKWIDHGSNSQQVEDYNEQISAQKFISINNYSNSYHYNTCDHQHSQFGNNNNGVFPSQV 251
           KGKWID GS++Q VEDYN       F   N Y++           SQFG NNNGVFPSQ+
Sbjct: 181 KGKWID-GSSNQHVEDYN-------FTPYNTYNS-----------SQFG-NNNGVFPSQI 240

Query: 252 EAQTSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLKP 311
           EA TSSSS SALFFTPYASYITNPFESHIHFLSSNSHAL NPF+P  S L PF SQNLKP
Sbjct: 241 EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVP--SALHPFASQNLKP 300

Query: 312 F-PANFNLKQLLH--DGG----SGKDGADGNS 327
           F  A+FN KQLLH  DG     S KDG  G+S
Sbjct: 301 FSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 300

[Close]

BLAST of MS002041 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 178.3 bits (451), Expect = 9.8e-45
Identity = 125/273 (45.79%), Postives = 157/273 (57.51%), Query Frame = 0


Query: 20  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 79
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 80  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQFHHPMSLFPAQYDYSSSSSSQFC 139
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+Q  +P  +F       S SS+   
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQM-YPNLIFGNSGFGESPSSTTST 155

Query: 140 SLPHPFAVDTKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLATKGKWIDHGSNSQQVEDY 199
           + P     +        L  ++  + +L DT    +E   L  KGKWI +  NS Q    
Sbjct: 156 TFP---GTNLGFLENWDLGGSSRTRARLTDTTTTQRESFDL-DKGKWIKNDENSNQDHQG 215

Query: 200 NEQISAQKFISINNYSN-SYHYNTCDHQHS--QFGNN----------NNGVFPSQVEAQT 259
                 Q+F   N Y+N S +YN    Q S  Q GNN          NN    +     +
Sbjct: 216 FNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPSS 275

Query: 260 SSSSGSALFFTPYASYITNPFESHIHFLSSNSH 279
           S+  GS LFF P    +++ F ++  FL ++ H
Sbjct: 276 SAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of MS002041 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 142.5 bits (358), Expect = 5.9e-34
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 15  GKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 74
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 75  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PAGFSQFHHPMS 122
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+H  S
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQS 150

[Close]

BLAST of MS002041 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 142.5 bits (358), Expect = 5.9e-34
Identity = 73/112 (65.18%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 15  GKYSFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 74
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 75  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PAGFSQFHHPMS 122
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+H  S
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQS 150

[Close]

BLAST of MS002041 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 138.7 bits (348), Expect = 8.6e-33
Identity = 104/249 (41.77%), Postives = 130/249 (52.21%), Query Frame = 0


Query: 32  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 91
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 92  WLLDVTKLDIDKLPPLQIPAGFSQFHHPMS----LFPAQYDYSSSSSSQFCSLPHPFAVD 151
           WLL+V K D+D LPPLQ P GF Q +  ++     FP  +D                   
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNLTGLGESFPGVFDLG----------------- 138

Query: 152 TKDSTTTHLNQTTMEKTKLWDTDLVPQEKASLATKGKWIDHGSNSQQVEDYNEQISAQK- 211
                 T      +EK K  + D V             IDH ++      ++  I + K 
Sbjct: 139 -----RTQREALDLEKRKWVNLDHVFDH----------IDHHNH------FSNSIQSNKL 198

Query: 212 -FISINNYSNSYHYNTCDHQHS---QFGN---------NNNGVFPSQVEAQTSSSSGSAL 263
            F +I + S+SYHYN    Q S   Q GN         NNN + P   E        S+L
Sbjct: 199 YFPTITSSSSSYHYNLGHLQQSLLDQSGNVTVAFSNNYNNNNLNPPAAETM------SSL 223

[Close]

BLAST of MS002041 vs. TAIR 10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 )

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-18
Identity = 79/254 (31.10%), Postives = 123/254 (48.43%), Query Frame = 0


Query: 36  RIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLD 95
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TA+Q YDLQD+L   QPSK ++WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 96  VTKLDIDKLPPL---QIPAGFSQFHHPMSLFPAQYD-------YSSSSSSQFCSLPHPFA 155
             +  I +LP L     P    + H   +L     +        S+S +S+  S      
Sbjct: 92  AAEDSISELPSLNNTHFPTD-DENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSR 151

Query: 156 VDTKDSTTTHLNQTTMEKTKLWD------TDLVPQEKASLATKGKWIDHGSNSQQVEDYN 215
            + +D       + T ++TK  D      TDL+      + +  +W+    +S  +E ++
Sbjct: 152 SELRDKARERARERTAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFS 211

Query: 216 EQI---SAQKF---ISINNYS----NSYHYNTCDHQHSQF----------GNNNNGVFPS 254
             +   S Q+    IS N++     + +H++   HQH +F            +N G F  
Sbjct: 212 SGLILGSGQQTHFPISTNSHPFSSISDHHHHHPHHQHQEFSFVPDHLISPAESNGGAFNL 271

The following BLAST results are available for this feature:

BLAST of MS002041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135226.1	1.3e-184	99.69	transcription factor TCP5-like [Momordica charantia]	[more]
XP_023516672.1	2.0e-108	70.76	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987421.1	4.5e-108	70.59	transcription factor TCP5-like [Cucurbita maxima]	[more]
KAG7023291.1	1.3e-107	70.55	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589600.1	2.2e-107	70.18	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS002041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	1.4e-43	45.79	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	8.4e-33	65.18	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	1.2e-31	41.77	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
A2XMN1	2.0e-18	57.30	Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV...	[more]
Q10CE8	2.0e-18	57.30	Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 ...	[more]

BLAST of MS002041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C023	6.4e-185	99.69	transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE...	[more]
A0A6J1JE53	2.2e-108	70.59	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]
A0A0A0LRU6	3.1e-107	63.37	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A6J1E797	3.1e-107	70.26	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1E2U7	1.7e-105	70.48	transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of MS002041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	9.8e-45	45.79	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	5.9e-34	65.18	plastid transcription factor 1	[more]
AT3G02150.2	5.9e-34	65.18	plastid transcription factor 1	[more]
AT5G08070.1	8.6e-33	41.77	TCP domain protein 17	[more]
AT4G18390.1	2.7e-18	31.10	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 46..163 e-value: 8.0E-25 score: 88.2
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 46..104 score: 26.691658
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 2..317
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 2..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002041.1	MS002041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity