MS002020 (gene) Bitter gourd (TR) v1

Overview


Name	MS002020
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
Location	scaffold30: 1831046 .. 1844362 (+)
RNA-Seq Expression	MS002020
Synteny	MS002020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGAGAAAATGACATGAAGACATGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTTTCTCAGCCAACCGTTGTGCAGTATATGATTGGACTATGTACGTTTCTCCTGTTTTTTACTTATTAATTTTTACATGCCCTTCAGTATTTCAATCCTGTTGTAAAAAGATATGGTTTTTATGGTGTGCTTTTGACGTTGACAATTCTATTGCAGCCAAACAAGCAGCATCACCTGCTGATGTAGTGAGCAAGTTGGTGGTAGATTTTGGCTTGCCATCTTCCAATGAAACGTTGGCTTTTGCTGAAGAAATGTTCTCTAGAGTGCCACGCAAGAAATCATCTGGTTTAAATGTAATATTTTAGTTGGAATTTTGTTTACTATTACAATGCGATTCATATTTTTTAAGTGTTTTTTCATGCCTTTTCTGTTCCATGCCTCCCTTCATGTATTGCATTTGCTGCTGTTCTTTACATTGAGTTGCTTAATTGTTTTCCTCCAGTCATGTCCTCTAATATCATTTCTTTTATCCTGCCTCTCCCACGTCAGCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTGGCAAGGAAGCAAAAGACATATGCACTACTGGATGCGGATGATGATGAAGATGATGTTGAAGAAAAAGGAGGCAACAGTGATAAATTTTCTGCTGGCATGGCTTCTACACCTCGAGAAGTGGAGAATCACAAAAAGCGGTTTAGGAAGAAAAGCGAACATCAAGAAGATGAAGATGATAACAAGGTATTCGTTTTATGTTGAAGATATGGAATATATATATATTTTCTTCTTTTAAGTGGGTTAATTTTTCACTGACTCGATGAGATGCTGCAGGAAAGTGTTCTTGAAAGAGAAGATAGACAGGTTAGAAGACGGACTACTAGTTCTGAAGATGATGATGGCTATGAGGTATACGTTTGAGCTTATTTGAGACTCTCTTAATTAGTAGTGTCAAATGCTTAAAAACCATAGGAGCCAGATGTCGAAAACTTTGTCTATTTTCACGTTTTTATTTTATTTTGTTTAAAAATCCACGTTGAAGTTATTTGCTATTATCCAATTCTTTTATATTACCGTCAAATACTGAATAATGGCTGCTATTGAAGCACATGCATGAAAGTACAGATATGCACATCATATTTTTTATGAAATGTGTGTCTCACTTGGAAAATGGTTCCATCACCATTGAGTTTGATAAGTAGTTTCTTTAATACTTGGATGTATCTATATCTATTACTTGGATAAAGACTTATTCAGTGGAACAAGTTTACTAACAGAAGTCATGTAGTTCCCGCAGCTCTCATAACATCATGTTTAAACTGAAATGCAGTCTGAGGAAGAGAGATTGCGTGATCAAAGGGAGAGGGAGCAATTAGAGCAAAATATAAGAGAACGGGATGCTGCAGGAACCCGAAAGGTATACTTGTATGAAATTGCTATATCTTCTTTCCCCCTCTTTTGAAAAGGATTCATTATTTCTTGTTTTAGATTTTTTGAAACAAGAAAAAAAGTTACAAGTAAAGTTTAGAATTGAACCAAATAAAACATGAAACTACGAATCTTATGACAAACCTTACAGCCGCCCCACCCCTGAAAAGACCTTAGGAGTTATACTCTTTGCAAACTTCATACATTGATGAAGTTGAGTTTCATATATTCTTTTTTTGTATGGTTGAATTAATGCATTGGCTGGTTGGATTAGTGGACCCAGTCAGCTTGAACTGATTGATTTATGTTAACAATCTTAATGTATGATGTAAATATGATAGTTGAAACATGTACAATCAATGAGCCGTCATGTTTGATATCTAAGGTTTGCTATCTTACCCTTAGGTCTTATTCTTTTGGATTAGATCCCTTTTTTATATGGTTAATCTTGTCTTGGCTCCTCTTGTTGGGATGTTTCTTGGTATGCCCTTTTGTTCCCTAAATGTTTCTCAATGGAAGCTTTGTTTCTCATTAAAAAAAAAGTATCCTTCATTTTGTACATATCAAGGTTGAGCACGGTGTTATTGGATCCTATCTTTTACTACCATCTCACTCTACGACATGCAGCAATGTCCTTAGAATTTCATTGTTTCTTGTTCTAATCCTAGTTTTCTTTGACAGTTAACAGAGCAGAAATTGAGTAGGAAGGAGGAAGGTAACTGATTTTAGTCTTAATCAATGTATTATAATATGTGAAATGGTTTGCACTTTTCTTCAGCTTACACTATCATCCTCATGCATTTAATGTTAAACAGACGAGGCAATTCGGAGATCAAAAGCTTTGGAGAATGACGGAATTGATACTTTGAGGTTTACTATTGCTAACTTCACTTTTACATTTCTTATGGTTTTGCCTTCCTTATTCTCTTGGGGTCAACTCTTCATTTGTACAGAAAATTTAATGAGTATGTGAAATAGTTGATTTGGTGGCCACAAGTTAGAAGGTACCCAAACATCATTTGAATGAATGCAGTCTCCTTACTATGGGAGCTAGTCTGGAGTGAAATAATAGGATAATCTTGGAGAAATCTTGTATTTGGGAGGAAACTTGAACACTAACAAAATTTATTGCCATCTTCTATAGCAGTTTTTCGAACTCCTACTGTTGAGGCTTCTGATTCTTCTTTATATTCTTTCTTTTGCAACCAATGATAAAGGGTTTGCTTCCATTCAAAGTTATACTTTGACCATTATAGAAATTATGAGCCCCAAAGCACCTTACACGGATGGGAGGGATAATGTGATGCTGCTCCCTGGTGGTTGTTAAGTAACTTTAAAGAGATTTAGAAGAATAAGACCCAGAAATATCTGAATGCCAAGGAATATAATCCTTATCAATATAGTCAACCCAATGTTTTGGAGAACAATGAGAGGAGGCTCCATTCATATTAAACCTCCCTATCGTTAAAAGGTGCCTTTGAAGAGCAAGGTCCACCTATCATTTGACAAGTCAAACAGTTTTTAATAACTAAATTTTAAGAATCAGAAATTTGATCCTGCTGCCCTTAGGTTGTTCCCCTTTTGATCTTCAATACATCTCTTGTTTCTGGGCGCGGAAACGAAGCTTCGACTCCCGGTTATAAAATAAAATAAAATAAATAATACATCTGTTGTTTCTTATCAGAAAAAAAGATAATCAGAAATTTGGAACAACACAGGAGTTTGTCTTCTGGAGAACATCCAGAAGCCGATGATCAAACCAGGAGGAGATATTACACTTTTTTTTTTGATATCCGTGTGTCTGGGCCAGCTTGCGCGCACCTCGACTATTCACGGGCCAACCGTCTGACCCTACTACATTTGGTTGACAAGGAAACTCGTAGGATATTAAATCCTAGATAGGTGGCCACCATGGTTTGAACTCATTCCCTCTAAGTCTTTTGCTATTTACATTGGCCCTCATTGACCACTTGAGCCATCCCATGATGGTTAGATATTACACTCATTTAACGGATCAAATTTGCCGCAAGTGTGAAGAAGCAGCTTGTAGTGTTAAGTTTCAGGGTGTTCTGCTTCTCTAATTTCTTGGACCTTCTGAATTACAGAATTAGTCATCCTGCCTTTCAAATTTCATACTCTCGACAAAATATCAAAGAGAGTCTTCTTCCAATTTAGAATCTGCACAGACCCATTTAGCTGCAAACGCTAAGTTCCTCAACCTTTTAGTTTCTAAATCCAATATGTTTGCCGATTACCCTTCTGGGACTAATATACTCTTAAAGAGGCTTTGTTAGGATTTCAACATGTTTGTTATAAAAACACAGAGAAAGACTCGTTGCATTAAATATGTAAAGAATTAGGAATTACGTGTGTAATTATGTAAATACATTAGTTATAATTTCTAAATCTCATTGATTATGAAATTTTAGATACTTATCCTCTAATATTCCTTACTGTTTCAGGAAAGTCTCAAGACAGGAGTATTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGGTATAATAGAACACATTCAATTGGTACAGTTGTTTATCATTGTGGGTTTTTATTTTATTTTATTTTATTTCGATGGAGTGCAATTTTCCATCCAAGGAATTGAAAAGATGTTAAATAGTTCTCTCAACTTATTTTGTTTTTCATATTCATGATGTCATTTTTCTCTCTCTATGTAGTCACCTCATCTTTCCTTTGTTTTCTCGAATTTCTTGATGATCTATACCAGAGATGATATAGAAGATGAGCAATATCTTTTTGAAGGTGTGAAGCTTACTGAAGCAGAATACCGGGAACTAAGGTAAGAGTGTACTTTCTTGCTGGTTTTTTTTTTGGTAAGAAACTAGTATTTCTCTTTCTTTAAAGACACTGATATTTCATTAATGGTATGAAATATACAAAGTTTCTCCAATCTTTTTACTATATAGGATCTGATGGGGATGTCTATGCCTCTTTATGTAATCTGGTGTGCTCTTACTGGTGGTCATGAAAGAAATCTTTTAAGTAATCCAATCTGTTAAGATCATTTTTTAGATTGCAAAACAAGTCATGTAAGGTCAGATCAATATTTTATGATAATTAGCTTTTTTCTTTGCTGTACTGAACCCTATTATTCATTTTTTTTATACGAAACAATACTTTCATTGAGGATAATGAAAAAGATACAAGAATTGTTCTTTAGTTCCCATTCACTTTGGAAATTTTTGGATATTTAATTTCTCATATGACTGTCAGGATATTTATCTCTGTACTAGCTAAAAAAGGTAGGACTTTGCTTGAAATAGGTATATGAGAATGAAACCTTGTGCTATATTTTGTTTGTTGTTTCCAGGTATAAGAAGGAAATATATGAGCTTGTGAAGAAGCGGACGGATGAGGCCGATGACATCGATGAGGTTATATCTTTGATCTTTCTTTCTTTCTTTGATGATATCGATTAGGTTATACCTTTAATGCTTGGGACCATGGTCTTTGTGTCAAAACATGTGATATTCCTAATGCTTGGGCTCTAGCGTTTATTTGATATTGATTTTTTCCCCTTGCTTCTTTTCTTTAATCTTTGTGTGTGTTCATTTTTTCCTTAAATTGGTTGAGTCTGCCAATGTTTCTAGCAAAATAACCTTGGTAGAGATGCAGGCAAGTGATTTCAACAGAATAGCCAAGTTCTTTGGGTGGTTTGGTTTTTTGGATTGTTGGGGCTATGGTCATTATTTGTGTCAAACATGTGACATTTCTAATGCTTTGGCTCTAGCGTTTATTTGATATTGATTTTTGGTCCTAGTTTTTCTTTAAAGTGTAAGATGCACTGAGGTACACAAGATTTTGGAGGTGGGAACCTCAAGTGAGGTGAGGCACAAATACCAAGAGAAATAACCCTTTTAAAAGTAGTGTTAGCACTGTCAAAAAAAAAACTGCAAAATATAATTTCTTATCCACCCTTGTATTTATTTAATTTTTTCTCTGATGAAAGTCCTTTTACTTGTTTGAATTTGAATATATAAAGAATTTCCTTGTTTTTTTTCCTTTAATTTTAAAAAAGAGGGAGTTATCTTCCAGTGGATACATTCTTTCATTTTTTATGTCGTGATTGGTGAATATTCATTCTAATAACTTGTGTGCGAATCATTCTCCTTTTTATTTCCGTTTTCAGTTGGAAAAAGAACATTGAATATCCATGAAAGATATACAAAGGGAAGGAGTAGTAGACATCCAATTCTTCCATCTTTTTTTTTTTTTTTTTCATGAAAAAAAAAAACCCTATTGTATCTACAAGAAAGCAATTGATTTTTGCTACTATGATACATTTCATTTATTGATTAATTACATATTTCACTATATTGGAGTGCAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGGGGTGTTAATCAGGATAAGAGGTTTGCTGTGGCAATGCAGCGGTATAGGTTAGTTGAACTCTTGGAAGAACAATGCTTAAACTTTTTTTTTTTTTTTTAGTTAGAAGTGTTGAAACATATGGTGTGAAAAGATACAACCAAAAAGCTATAATCCTTCCCAAAATGAGCTTACAAGAAACCGCTCCAATTTGAGTTAACTACAAACGGAGTATAATTGTAAAAAAAATTAGATAAGGATGCCCAACAAGAACAGTGAAATTGTCACATTAAATACCTTATTGTTGCTCTCTGTCGATACATCTTGTTTTTCTTTGTCAAAATCTTTGAAATATTACTACCCTTGCAGGGATTCAGGCGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCTTGGGAGGAACACCAAATAGGTAAGTGCCACTTCTCTGAGGTTCTAGCAATGTTCTTCGTTCAGATTCTAACACAATTATCCTTCAGGGAAAGCAACAATGAAATTTGGTTCCAAAAATAAAAAGCAATCATCAGATGACTATCAGTAAGTATTTTATGGTTCTGAAATTTTCCTTTTATGTCTATGATATTTAGTTAGATTATGTTACTACTACTCTACTATCCTTGGTTGTATTTTACTGCTCATTGTTGATACGAGGTGGTTGCCATTGTCTACTATATAATATTTTTATTTAATCTTTTAAAATTTATTTATCTCTTGTATATAGAGAAAATGAACCATTTCCTGAATCCTTTTGTTTTAGGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCATCAGTTATGGAAGGTGATGAGGTGTGGCTTAAAACTTCAATAGTTATAGCATGGAGTTGTGGTACTGTAGTAAAAATCTTGTTTATTTCATGCTACCTTCATTCATTCTTGGCAGTTTGTTGATGAACGGGAGACTGAATCACTGGAGAAGTCCAAGGCTAAATCAGCTTTGGAGAAGCTGCAGGTTTACATTTTGATTACTCTATCGCATCAAGTTTGTATTCATATGAACAGAAAGTTTAATATTCATAGTTATTAAGTCTTCGTATAAACAGATTGGATAGAGTTTATTCAAGATGAATTGGAAGGGGATACTTTTTCTTGTGATGATGATCAGGCTGCGCCTGTGCCAATCATAAACATTAATTTCTGGTTGAAACTTTGTGTCAACCAGTCTCTTTTTAACAAGATATGATATTTTTTACTTTTAATAATCTTTGTTCGTGTTTACTATCCACTTACAACTGAGTGAGATTTTGTATTCTTTTTGCCTAGGAGGAGAGGAAAACACTGCCAATCTATCCGTATCGTGATCAGTTACTCCAAGCTGTCAATGATTATCAGGTGGGTTTCTTGTTTCGAGTGGATGAAAATTGCAGTCTGTTCAAACATTTTCGTTTATGTTCACCACTTTTCACAAAAAAAAAAAAAAAAATATAGACGAGGGGAAGATTACATGGTTCCATACTAACCTAAAAATTGGGAGCTCTCGAACTCTAACTAAAGAATAAAACAACGGCTAACTCCTTTAGAAAGCAGACGCCACAGGGTTCTATTGATCCAAGCTCATAAAAGTTTCATCCTATGTCAATCTTGTATATCTCCCAGTCACATTAATCCTCCTGAAGTAGTTAAATGGGAAACACTATACAGAAGCATGATCTTAGGTTGCTTCCTGAGGTGGATAATGAGAGCTAGAGCGAAAAATCTTCAACTAAGGAAGGAAGGAGTGGCCCACATAAGTAAAAGGTTTCTTGAAAATTCTTTCAGATGTGATCAAGGTCTTCACTTGTTTGTTGCAAAGGATGCTCACAGAATTGGTGCACATGGTGGGTGTCATTTCATGTTCTTTTGATGGTGTTTAAACTCACTAAGTATTAAGGTGCAGATGAAGAACTAAATTTCTTTTTTTCATATAATCAATGAAATACTTGTTTCTTAACCCTCAAAAAAGAAAAAAAAAAAAGAAATGAAATATTTTAGGCATTTTTTAATATCTAATTATCTTTGGACAAATGTCTGCATGCATGTAAGTAACTTTGTTGTAATGCCTGATTTCTTCCTTTTATAGGTTCTTGTAATTGTTGGTGAAACTGGTTCTGGAAAGACTACGCAGATACCTCAATATCTTCACGAAGCTGGGTACACAAAGCGAGGAAAAGTATAACCTTCAATACTCACCATAATATATTTCATTTATTGTACTTAGTAGAGCCTGGATGTTTTGGATATTTTTGTAGGAATTCTTACATTATTCTCTTGTTGGTTGCCATAAGATATGGTCAATGATTTCTATTTCCTCTTCTAGTTTTGATTTAGGAGTCAGTTGCACATTGTTGTGAGCAAACAAAATGCTGCATGAGCTTGTAATTAGTCTCAGGTGAATGATTTATCATAATCTTCCTGTTTTCCTGAGATGTAAAATTCATTTTCCTGCTATCATCTTAAGGTTGGATGCACACAACCACGTCGAGTTGCTGCTATGAGCATTGCTGCCCGCGTATCTCAAGAACTGGGTGTCAAGCTTGGGCACGAGGTGATGCTGCTAAGACTGTAAACTAAATCCTTCTCCCTTCTATGAGTTATTTTGATATTGTGGTGTATCTTATTACGCAATTTGTTTTACATCATACTCTTTATTAGCTTATTTATTGTGTAAGATGGAACAAACAACTCTTTTTTCATTCTTTGCATTTTCTAACTTGTGTTTACATTTATGCAACCTATCCTTTGGTTTGTTATTTAACGCGGGTATTGCTATCAGTGGTATCTGTTACATTGTGCTTGTATACTTCCTTTGAATTCCCTTAATTTATTTCTCTTAGCTCAATTCTCTTCCTAATATTTTCAGGTTGGTTATTCAATACGTTTTGAGGATTGTACGTCAGATAAGACTGTTTTAAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGTGAACCGGACCTTGCAAGCTACAGGTGCACCTTACTGCATGCTTGATGTTTATTCATACTCCAAATTAGTTAGTCTGTATTATAATTCTATTTTCTAACTTCTTTAAAACCCTTTTTAGTGTGATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTTCTGTTTGGCTTAGTGAAGGTGAGCTGGATCTCCATCCATAATTTCATTTTATGCATGATGCAGTTTATGTTATGTTTATTAGTATCTTGTTTCTTTCCGTTAGCTCAATTATTGTTGTTGTTTTTACTAATTTTATTTGTGTTTTTGTCTAATAGGATATTGCAAGGTTTCGACCTGATTTGAAGTTACTAATTTCTAGTGCAACACTTGATGCTGAGAAGTTCAGCGATTACTTCGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTCACTTCACAAAAGCGCCAGAAGCAGACTATTTAGATGCAGCAATCGTGACCGCGCTTCAGATCCATGTCACAAAGCCTCCAGGAGATATACTGGTGTTTCTCACTGGTCAGGAAGAAATTGAAGCAGCTGAGGAAATAATGAAACACAGAACTCGAGGACTAGGCACAAAAATTGCAGAACTCATTATCTGCCCCATATATGCTAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACGCCTGTAGGAGCAAGGAAAGTTGTCCTAGCAACTAATATAGCAGAAACATCATTGACGATTGATGGGATAAAATATGTTATCGATCCTGGTTTTTCAAAAATAAAATCCTATAACCCAAGGACTGGGATGGAGTCATTGCAAGTGAGTCCCATTTCGAAAGCATCAGCAAATCAGAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTACAGTTATTACAATGAAATGGAAGACAATACAGTACCAGAAATACAAAGAACAAACCTTGCTAATGTTGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCATTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTTGGTGAATTGACTAAATTGGGTAGGCGGATGGCAGAGTTTCCTCTGGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAGAAGTTCAAGTGTTCAGATGAGGTCATTTCTATTGCAGCTATGCTTTCTATTGGCAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACCGGGAATGTTGGGGATCACATCGCATTGCTGAAGGTTTCATTTCTTGAGCAATTTTTTTCCAAGTATCTTTTACATTCTTAAACTATATTTTTAATTTATCTATTTTTAAAATTTTCTTGTTTAACCTTTTCTAAAACCAAAGCATTCATTACTGATGATAATCATAAAACTCTTCATTTATTGGGCCTTTTCTCTTAGGCGACCATTCATTTGTTTGGCATATAATTTCTGAACTTGGTCTAAAATAAGTTAGGTTTTAAAAAATTCATGTCCAAATTTGTTAATTATGGAACTGTTATTTGCTTCCTTAATTTTTTTAATTGATTATTTTAGGTATACAACTCTTGGAGGGAAACAAATTACTCCACACAATGGTGCTACGAGAATTACATCCAGGTTGGTTCAGCTAATCTTTAGCTAATTATACTGTCTTCATCTTTTTAACTTTTTTTTTTCTTTTTAAGAAACATAATGTATTGAACAAAATAAGAGAAACATCCCTGGAGACAAGGCTCTAAAGAACTAACGCAATACAGCTTTCCAATCGTGAGAGATCAATGCTAAACTGTAATGTCAAAATAATCTCCTATGACTAAGACACCAAGAAACCATATTAGTTTATACATTTTCACAAAGATATCAAAAGGATGTGTCGTGTTGCTGAAAACTCATTGGTCTCTTTCCTTCCAAATGCTCCAAGAAAAAAAAAAAAAAGTTCTAGCAGTACAACTCCAAAAGATTTTAGCTTTTCCTTCAAAAAGCCACCCCTGAAGCACTTCAAGAAGCCAATCATCCACCATTCTAGGGAGGCACGTAGAGATATCGAGTTCTCTCATCATAAAAANAATGAAAAATAGATACAAAACAAGGAGGGCATACAAAAAACAGCCCTGCAAAAGGGAGCTCCTAAAGAAACGGGCTCTAATCCAAAAGAATGGGACCTAACTGATAATTACAAATGGCCTTAGTGACTGAACTCCATAAGGAAGTATTAAACCGAATGAGGTCCCAAATATAATCTGCAGTTTTTTCCACCCCCTAAACTGCCTGTTGTTGATACCCCATAACGTAGCCAGAAAACCCGCTTGCCAAAGAAAACACGAAAAGGGGGAATAACAACACTTCCTCCATCATCACCCTACAATCTCTGGAACGGACCCAAACAATCCCAAAACATCTAAAGAATCGAAGCCATAACAACACTTCTTGTTTCTGAATATTTATCCTTAGGTACCTGATGATAAGTCCTTCCTGACATCTGCTTAAAGTGATAATCATTATAGAGCAAGTTATATCATTTATTTGGGATGTGGGGGAGTAATATATGCTGTTACCATTTCCGACACACAGACTAATGTGTGACGACTACAGCATCTAATATTTATCTTTGATGTTTAGGATTTCTATTTTTTGAGGAATGTGTTAATTTATAATTCTCAGAGCTGATATATTATTCTTTGTGTTTACTAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAGGGGCTCTTAGAAAGGGTTGAAATCGAACTAACCTCAAATTTGAATGATTTAGATGCAATAAAGAAGACAATAATATCTGGTAAGTGGTTATTAGAAGTTATTCCTATTTTTTTTGTATTCTGAATTCTGTAATGCCATTTTAAGCGGTGTAAACTATTTTAAATTCTGGCATAAAACAGCTTAATGGAAGTCGTGAAACATGAAATGTGACTGGAATAAGGAAATAAAAAGTGTACGAAGTTATAAATGATTGATATGTTTGGTTTCCCTTTAAATAGACAGGTTTTGTAAATTATTAACGCTGACCCATCAAATCTGTCATACAGCAGCAGGCTGAAAGCTTATTGACATATTAAAACTAAAAAGTTATATTATGGATTAGAGACTGAAAATTTGTCCACAGCTTTGGACAAAGCTTATTGACATATTCAAATGTGTAAAATGGCTAATTGTACTGCATTGTAGTTGGGTTACACATCGACTGTAGCAGCTGTATTCTGTGTATTTTGTGCCTTTGCCTCCAATGGTGCTACAATAAGTCTTGAAGATAGTGCGACATTGAAGACCTATTTTTTCCTGTGTAGAATTAGAATAGGATGTACGTTGATCTGGTTTGCTAAATCATATTATAGGGATTTCACTTGGACTAATGTGGAAGTCGGTTATAGGTATTTAATTATTTGTTATTCTGTTGGGAGTTCTTCAAGAAACTATCTTGGTTCATCTTCATTTCTTTTCTCTCAATAATGCTGGAAAGTTTAACTGATTTTAACTGAATTGTCTTCTAGATAGTGTTAGAGCTGTGTCGAAACTCAGAGTTTCACTAATGCTTGAAAAAGTGTTTTCTTCCTCTATTGGGTTCTACAGTTTTTTTTGATTAAAATTGTTTTCCAGGTTACTTCCCTCATTCTGGAAAGTTGCAAAAGAATGGCTCGTATCGGACCATTAAGCATCCGCAGACAGTTCATATACATCCTAGCTCAGGGTTGGCTCAGGTAAGCTGTGTTCTTTTAGCTCCAATTTGGCAGCAGAACTCACTTTCACAAAAGGAAGAATCTAGCTTATATGGTTTTCATTCTTTTGATTGACGACCTCAGGTTCTTCCAAGATGGGTTGTATACCATGAATTGGTATGCACCTCCAAGGAGTATATGAGACAGGTGATAATACTCTCTGCCCTCTAATTAACCAATTTTAGTTCATCTTCTTCCTTCTTTTGCACTAATATGTTATCAATCAATTGAATCCACAGGTAACGGAATTGAAGCCTGAATGGTTGGTTGAAATTGCTCCACATTTCTACCAGCTCAAGGACGTGGAAGATTGTATGCTCTCTCTCTCTCTCTCTGTCTGAACTTTACATAAGATTATCTTTCAGAACAAGGAAATACATAGCAAGATATTATACAGATAGAAATGAAATGGGACCCTTAAAATTGTAGCAATTTATCTATGATCTGTCAATTCAATTAACATCTTCTAACTGTTCACAACCTGAGTTAATGAAGATAGTCTAAGACTGAATTTGAAAGGAGAGAGGAACAACTTGATGAGCTATAAATTTCATATCTTTTGTGCTTAATGTTGTTGTTTGATAGTGAGTTCAAAGAAGATGCCGCGCGGAGAAGGTCGTGCTAGTGAAATTGGCNCAAGAAAAAAA

mRNA sequence

ATGGGGGGAGAAAATGACATGAAGACATGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTTTCTCAGCCAACCGTTGTGCAGTATATGATTGGACTATCCAAACAAGCAGCATCACCTGCTGATGTAGTGAGCAAGTTGGTGGTAGATTTTGGCTTGCCATCTTCCAATGAAACGTTGGCTTTTGCTGAAGAAATGTTCTCTAGAGTGCCACGCAAGAAATCATCTGGTTTAAATCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTGGCAAGGAAGCAAAAGACATATGCACTACTGGATGCGGATGATGATGAAGATGATGTTGAAGAAAAAGGAGGCAACAGTGATAAATTTTCTGCTGGCATGGCTTCTACACCTCGAGAAGTGGAGAATCACAAAAAGCGGTTTAGGAAGAAAAGCGAACATCAAGAAGATGAAGATGATAACAAGGAAAGTGTTCTTGAAAGAGAAGATAGACAGGTTAGAAGACGGACTACTAGTTCTGAAGATGATGATGGCTATGAGTCTGAGGAAGAGAGATTGCGTGATCAAAGGGAGAGGGAGCAATTAGAGCAAAATATAAGAGAACGGGATGCTGCAGGAACCCGAAAGTTAACAGAGCAGAAATTGAGTAGGAAGGAGGAAGACGAGGCAATTCGGAGATCAAAAGCTTTGGAGAATGACGGAATTGATACTTTGAGGAAAGTCTCAAGACAGGAGTATTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGAGATGATATAGAAGATGAGCAATATCTTTTTGAAGGTGTGAAGCTTACTGAAGCAGAATACCGGGAACTAAGGTATAAGAAGGAAATATATGAGCTTGTGAAGAAGCGGACGGATGAGGCCGATGACATCGATGAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGGGGTGTTAATCAGGATAAGAGGTTTGCTGTGGCAATGCAGCGGTATAGGGATTCAGGCGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCTTGGGAGGAACACCAAATAGGGAAAGCAACAATGAAATTTGGTTCCAAAAATAAAAAGCAATCATCAGATGACTATCAGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCATCAGTTATGGAAGGTGATGAGTTTGTTGATGAACGGGAGACTGAATCACTGGAGAAGTCCAAGGCTAAATCAGCTTTGGAGAAGCTGCAGGAGGAGAGGAAAACACTGCCAATCTATCCGTATCGTGATCAGTTACTCCAAGCTGTCAATGATTATCAGGTTCTTGTAATTGTTGGTGAAACTGGTTCTGGAAAGACTACGCAGATACCTCAATATCTTCACGAAGCTGGGTACACAAAGCGAGGAAAAGTTGGATGCACACAACCACGTCGAGTTGCTGCTATGAGCATTGCTGCCCGCGTATCTCAAGAACTGGGTGTCAAGCTTGGGCACGAGGTTGGTTATTCAATACGTTTTGAGGATTGTACGTCAGATAAGACTGTTTTAAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGTGAACCGGACCTTGCAAGCTACAGTGTGATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTTCTGTTTGGCTTAGTGAAGGATATTGCAAGGTTTCGACCTGATTTGAAGTTACTAATTTCTAGTGCAACACTTGATGCTGAGAAGTTCAGCGATTACTTCGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTCACTTCACAAAAGCGCCAGAAGCAGACTATTTAGATGCAGCAATCGTGACCGCGCTTCAGATCCATGTCACAAAGCCTCCAGGAGATATACTGGTGTTTCTCACTGGTCAGGAAGAAATTGAAGCAGCTGAGGAAATAATGAAACACAGAACTCGAGGACTAGGCACAAAAATTGCAGAACTCATTATCTGCCCCATATATGCTAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACGCCTGTAGGAGCAAGGAAAGTTGTCCTAGCAACTAATATAGCAGAAACATCATTGACGATTGATGGGATAAAATATGTTATCGATCCTGGTTTTTCAAAAATAAAATCCTATAACCCAAGGACTGGGATGGAGTCATTGCAAGTGAGTCCCATTTCGAAAGCATCAGCAAATCAGAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTACAGTTATTACAATGAAATGGAAGACAATACAGTACCAGAAATACAAAGAACAAACCTTGCTAATGTTGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCATTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTTGGTGAATTGACTAAATTGGGTAGGCGGATGGCAGAGTTTCCTCTGGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAGAAGTTCAAGTGTTCAGATGAGGTCATTTCTATTGCAGCTATGCTTTCTATTGGCAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACCGGGAATGTTGGGGATCACATCGCATTGCTGAAGGTATACAACTCTTGGAGGGAAACAAATTACTCCACACAATGGTGCTACGAGAATTACATCCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAGGGGCTCTTAGAAAGGGTTGAAATCGAACTAACCTCAAATTTGAATGATTTAGATGCAATAAAGAAGACAATAATATCTGGTTACTTCCCTCATTCTGGAAAGTTGCAAAAGAATGGCTCGTATCGGACCATTAAGCATCCGCAGACAGTTCATATACATCCTAGCTCAGGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGAATTGGTATGCACCTCCAAGGAGTATATGAGACAGGTAACGGAATTGAAGCCTGAATGGTTGGTTGAAATTGCTCCACATTTCTACCAGCTCAAGGACGTGGAAGATTTGAGTTCAAAGAAGATGCCGCGCGGAGAAGGTCGTGCTAGTGAAATTGGCNCAAGAAAAAAA

Coding sequence (CDS)

ATGGGGGGAGAAAATGACATGAAGACATGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTTTCTCAGCCAACCGTTGTGCAGTATATGATTGGACTATCCAAACAAGCAGCATCACCTGCTGATGTAGTGAGCAAGTTGGTGGTAGATTTTGGCTTGCCATCTTCCAATGAAACGTTGGCTTTTGCTGAAGAAATGTTCTCTAGAGTGCCACGCAAGAAATCATCTGGTTTAAATCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTGGCAAGGAAGCAAAAGACATATGCACTACTGGATGCGGATGATGATGAAGATGATGTTGAAGAAAAAGGAGGCAACAGTGATAAATTTTCTGCTGGCATGGCTTCTACACCTCGAGAAGTGGAGAATCACAAAAAGCGGTTTAGGAAGAAAAGCGAACATCAAGAAGATGAAGATGATAACAAGGAAAGTGTTCTTGAAAGAGAAGATAGACAGGTTAGAAGACGGACTACTAGTTCTGAAGATGATGATGGCTATGAGTCTGAGGAAGAGAGATTGCGTGATCAAAGGGAGAGGGAGCAATTAGAGCAAAATATAAGAGAACGGGATGCTGCAGGAACCCGAAAGTTAACAGAGCAGAAATTGAGTAGGAAGGAGGAAGACGAGGCAATTCGGAGATCAAAAGCTTTGGAGAATGACGGAATTGATACTTTGAGGAAAGTCTCAAGACAGGAGTATTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGAGATGATATAGAAGATGAGCAATATCTTTTTGAAGGTGTGAAGCTTACTGAAGCAGAATACCGGGAACTAAGGTATAAGAAGGAAATATATGAGCTTGTGAAGAAGCGGACGGATGAGGCCGATGACATCGATGAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGGGGTGTTAATCAGGATAAGAGGTTTGCTGTGGCAATGCAGCGGTATAGGGATTCAGGCGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCTTGGGAGGAACACCAAATAGGGAAAGCAACAATGAAATTTGGTTCCAAAAATAAAAAGCAATCATCAGATGACTATCAGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCATCAGTTATGGAAGGTGATGAGTTTGTTGATGAACGGGAGACTGAATCACTGGAGAAGTCCAAGGCTAAATCAGCTTTGGAGAAGCTGCAGGAGGAGAGGAAAACACTGCCAATCTATCCGTATCGTGATCAGTTACTCCAAGCTGTCAATGATTATCAGGTTCTTGTAATTGTTGGTGAAACTGGTTCTGGAAAGACTACGCAGATACCTCAATATCTTCACGAAGCTGGGTACACAAAGCGAGGAAAAGTTGGATGCACACAACCACGTCGAGTTGCTGCTATGAGCATTGCTGCCCGCGTATCTCAAGAACTGGGTGTCAAGCTTGGGCACGAGGTTGGTTATTCAATACGTTTTGAGGATTGTACGTCAGATAAGACTGTTTTAAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGTGAACCGGACCTTGCAAGCTACAGTGTGATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTTCTGTTTGGCTTAGTGAAGGATATTGCAAGGTTTCGACCTGATTTGAAGTTACTAATTTCTAGTGCAACACTTGATGCTGAGAAGTTCAGCGATTACTTCGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTCACTTCACAAAAGCGCCAGAAGCAGACTATTTAGATGCAGCAATCGTGACCGCGCTTCAGATCCATGTCACAAAGCCTCCAGGAGATATACTGGTGTTTCTCACTGGTCAGGAAGAAATTGAAGCAGCTGAGGAAATAATGAAACACAGAACTCGAGGACTAGGCACAAAAATTGCAGAACTCATTATCTGCCCCATATATGCTAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACGCCTGTAGGAGCAAGGAAAGTTGTCCTAGCAACTAATATAGCAGAAACATCATTGACGATTGATGGGATAAAATATGTTATCGATCCTGGTTTTTCAAAAATAAAATCCTATAACCCAAGGACTGGGATGGAGTCATTGCAAGTGAGTCCCATTTCGAAAGCATCAGCAAATCAGAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTACAGTTATTACAATGAAATGGAAGACAATACAGTACCAGAAATACAAAGAACAAACCTTGCTAATGTTGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCATTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTTGGTGAATTGACTAAATTGGGTAGGCGGATGGCAGAGTTTCCTCTGGATCCCATGCTTTCTAAGATGATGGTTGCTTCTGAGAAGTTCAAGTGTTCAGATGAGGTCATTTCTATTGCAGCTATGCTTTCTATTGGCAATTCTATCTTTTATCGTCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACCGGGAATGTTGGGGATCACATCGCATTGCTGAAGGTATACAACTCTTGGAGGGAAACAAATTACTCCACACAATGGTGCTACGAGAATTACATCCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAGGGGCTCTTAGAAAGGGTTGAAATCGAACTAACCTCAAATTTGAATGATTTAGATGCAATAAAGAAGACAATAATATCTGGTTACTTCCCTCATTCTGGAAAGTTGCAAAAGAATGGCTCGTATCGGACCATTAAGCATCCGCAGACAGTTCATATACATCCTAGCTCAGGGTTGGCTCAGGTTCTTCCAAGATGGGTTGTATACCATGAATTGGTATGCACCTCCAAGGAGTATATGAGACAGGTAACGGAATTGAAGCCTGAATGGTTGGTTGAAATTGCTCCACATTTCTACCAGCTCAAGGACGTGGAAGATTTGAGTTCAAAGAAGATGCCGCGCGGAGAAGGTCGTGCTAGTGAAATTGGCNCAAGAAAAAAA

Protein sequence

MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIGXRKK

Homology

[Close]

BLAST of MS002020 vs. NCBI nr
Match: XP_022134864.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134865.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia] >XP_022134866.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia])

HSP 1 Score: 2040.4 bits (5285), Expect = 0.0e+00
Identity = 1057/1060 (99.72%), Postives = 1057/1060 (99.72%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL
Sbjct: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGN DKF
Sbjct: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNGDKF 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
            SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE
Sbjct: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ERLRDQREREQLEQNIRERDAAGTRKLTE KLSRKEEDEAIRRSKALENDGIDTLRKVSR
Sbjct: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEPKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSG ADKMNPFAEQEAWEEHQIGKATMKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGTADKMNPFAEQEAWEEHQIGKATMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI
Sbjct: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV
Sbjct: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1060

[Close]

BLAST of MS002020 vs. NCBI nr
Match: XP_038879655.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879656.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879657.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879658.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879659.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >XP_038879660.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida])

HSP 1 Score: 1923.3 bits (4981), Expect = 0.0e+00
Identity = 998/1060 (94.15%), Postives = 1030/1060 (97.17%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGE D+KTW+SDQLMSLLGFSQPT+VQYMIGLSKQA SPADVVSKLV+DF LPSS ETL
Sbjct: 1    MGGEKDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVSKLVIDFSLPSSGETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRK+SSGLNLYQKQEREAA LARKQKTYALLDADD  +DVE+KG +SD  
Sbjct: 61   AFAEGIFSRVPRKQSSGLNLYQKQEREAASLARKQKTYALLDADD--EDVEDKGRSSD-- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                   PRE +N +K FRKK+E+QEDEDD KES +ERE+RQV+RR +SSE DDG ESEE
Sbjct: 121  -------PRETKNREKHFRKKNEYQEDEDDEKESAIERENRQVKRRASSSE-DDGSESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ERLRDQREREQLEQN+RERDAAGT+KLTEQKLSRKEE+EAIRRS+ALEN+GIDTLRKVSR
Sbjct: 181  ERLRDQREREQLEQNMRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENNGIDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDI+
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIN 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVA+QRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVALQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQ+SDDYQFVFEDQIEFIKASVMEGDEFVDER+TESLEKSKAKSALEKLQEERKTLPI
Sbjct: 361  NKKQASDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAKSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTP+GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGME+LQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV
Sbjct: 961  TIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRG+GRA   G
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGQGRAGATG 1048

[Close]

BLAST of MS002020 vs. NCBI nr
Match: XP_008453258.1 (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo] >XP_008453259.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo])

HSP 1 Score: 1920.2 bits (4973), Expect = 0.0e+00
Identity = 996/1060 (93.96%), Postives = 1031/1060 (97.26%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGEND+KTW+SDQLMSLLGFSQPT+VQYMIGLSKQA SPADVV+KLV+DF LPSS ETL
Sbjct: 1    MGGENDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRK+SSGLNLYQKQEREAA+LARKQKTYALLDA DDEDDVE+KG +SD  
Sbjct: 61   AFAEGIFSRVPRKQSSGLNLYQKQEREAAMLARKQKTYALLDA-DDEDDVEDKGRSSDL- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                    +E EN K+ FR+K+E+QEDEDD KES LERE+RQV+RR +SSEDD   ESEE
Sbjct: 121  --------KETENRKRHFRRKNEYQEDEDDEKESALERENRQVKRRASSSEDDSS-ESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ERLRDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRS+ALEN+GIDTLRKVSR
Sbjct: 181  ERLRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENNGIDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLT+AEYRELRYKKEIYELVKKRTDEADD++
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTDAEYRELRYKKEIYELVKKRTDEADDVN 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDER+TESLEKSKA+SALEKLQEERKTLPI
Sbjct: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGME+LQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETN+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRT+KHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV
Sbjct: 961  TIISGFFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRG+GRA   G
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGQGRAGAPG 1049

[Close]

BLAST of MS002020 vs. NCBI nr
Match: XP_011660328.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN63716.1 hypothetical protein Csa_013602 [Cucumis sativus])

HSP 1 Score: 1917.9 bits (4967), Expect = 0.0e+00
Identity = 996/1061 (93.87%), Postives = 1029/1061 (96.98%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGEND+KTW+SDQLMSLLGFSQPT+VQYMIGLSKQA SPADVV+KLV+DF LPSS ETL
Sbjct: 1    MGGENDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRK+SSGLNLYQKQEREAA+LARKQ TYALLDA DDEDDVE+KG +SD  
Sbjct: 61   AFAEGIFSRVPRKQSSGLNLYQKQEREAAMLARKQTTYALLDA-DDEDDVEDKGRSSDL- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRR-TTSSEDDDGYESE 180
                    +E EN KK FR+K+E+QEDEDD KES LERE+RQV+RR   SS +D+  ESE
Sbjct: 121  --------KETENRKKHFRRKNEYQEDEDDEKESALERENRQVKRRQRASSSEDESSESE 180

Query: 181  EERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVS 240
            EERLRDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRS+ALENDGIDTLRKVS
Sbjct: 181  EERLRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVS 240

Query: 241  RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDI 300
            RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLT+AEYREL+YKKEIYELVKKRTDEADDI
Sbjct: 241  RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDI 300

Query: 301  DEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS 360
            +EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS
Sbjct: 301  NEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS 360

Query: 361  KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLP 420
            KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDER+TESLEKSKA+SALEKLQEERKTLP
Sbjct: 361  KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLP 420

Query: 421  IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI 480
            IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI
Sbjct: 421  IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI 480

Query: 481  AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDE 540
            AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSV+MVDE
Sbjct: 481  AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDE 540

Query: 541  AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 600
            AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI
Sbjct: 541  AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 600

Query: 601  HFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE 660
            +FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE
Sbjct: 601  NFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE 660

Query: 661  LIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN 720
            LIICPIYANLPTELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN
Sbjct: 661  LIICPIYANLPTELQAKIFEPTPDGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN 720

Query: 721  PRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA 780
            PRTGME+LQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA
Sbjct: 721  PRTGMEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA 780

Query: 781  NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD 840
            NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD
Sbjct: 781  NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD 840

Query: 841  PMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 900
            PMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA
Sbjct: 841  PMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 900

Query: 901  LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK 960
            LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK
Sbjct: 901  LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK 960

Query: 961  KTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ 1020
            KTIISGYFPHS KLQKNGSYRT+KHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ
Sbjct: 961  KTIISGYFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ 1020

Query: 1021 VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRG+GRAS  G
Sbjct: 1021 VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGQGRASAPG 1051

[Close]

BLAST of MS002020 vs. NCBI nr
Match: KAG6587574.1 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1911.3 bits (4950), Expect = 0.0e+00
Identity = 994/1058 (93.95%), Postives = 1025/1058 (96.88%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGENDMKTWISDQLMSLLGFSQPT+VQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL
Sbjct: 83   MGGENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 142

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRKKS+GLNLYQKQEREAAILAR QK Y LLDA DDE+ +E+KGG+ D  
Sbjct: 143  AFAEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDA-DDEEVLEDKGGSGD-- 202

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                   PRE EN KKRFRKK+E+QEDEDD +ES LERE+RQV+RRT+SSE DDG ESEE
Sbjct: 203  -------PRETENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSE-DDGSESEE 262

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ER RDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRSKALENDG DTLRKVSR
Sbjct: 263  ERQRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSR 322

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLF+GVKLTE EYRELRYKKEIYELVKKRTDEAD+I+
Sbjct: 323  QEYLKKREEKKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRTDEADEIN 382

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWE+HQIGKA+MKFGSK
Sbjct: 383  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEDHQIGKASMKFGSK 442

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQ +DDYQFVFEDQIEFIKASVMEGDEFVDE + ESLEKSKAKSALEKLQEERKTLPI
Sbjct: 443  NKKQ-ADDYQFVFEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPI 502

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 503  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 562

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKT+LKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 563  ARVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVIMVDEA 622

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 623  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 682

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 683  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 742

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTP+GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 743  IICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 802

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 803  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 862

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTK+GRRMAEFPLDP
Sbjct: 863  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDP 922

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEK KCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 923  MLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 982

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 983  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 1042

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRW VYHELVCTSKEYMRQV
Sbjct: 1043 TIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQV 1102

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASE 1059
            TELKPEWLVEIAPHFYQLKDVEDLS KKMPRG+GR +E
Sbjct: 1103 TELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1128

[Close]

BLAST of MS002020 vs. ExPASy Swiss-Prot
Match: Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)

HSP 1 Score: 1578.5 bits (4086), Expect = 0.0e+00
Identity = 803/1054 (76.19%), Postives = 943/1054 (89.47%), Query Frame = 0


Query: 5    NDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 64
            ND+KTW+SD+LM LLG+SQ  VV Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 65   EMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGM 124
            E+F+RVPR K++G+NLYQK E EAA+L RKQKTYALLDADDDED+V  +  +S       
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS------- 123

Query: 125  ASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLR 184
             S  R+ +  KKRFRKKS  Q DE D + +V E + R VRR+   SE+DDG ESEEER+R
Sbjct: 124  VSESRKSDKGKKRFRKKS-GQSDESDGEVAVRE-DSRHVRRKV--SEEDDGSESEEERVR 183

Query: 185  DQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYL 244
            DQ+ERE+LEQ++++RD A TRKLTEQ LS+KE++EA+RR+ ALE D + +LRKVSRQEYL
Sbjct: 184  DQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYL 243

Query: 245  KKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRM 304
            KKRE+KKL+E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKRT + D+++EYR+
Sbjct: 244  KKREQKKLDELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYRI 303

Query: 305  PEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQ 364
            P+AYDQEGGV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKAT+KFG+KN KQ
Sbjct: 304  PDAYDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKN-KQ 363

Query: 365  SSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKA-KSALEKLQEERKTLPIYPY 424
            +SDDYQFVFEDQI FIK SVM G+ + D  + +   +  A K+ALE+LQE R++LPIY Y
Sbjct: 364  ASDDYQFVFEDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTY 423

Query: 425  RDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARV 484
            RDQLL+AV ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV
Sbjct: 424  RDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARV 483

Query: 485  SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHER 544
            +QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE LGEPDLASYSV++VDEAHER
Sbjct: 484  AQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHER 543

Query: 545  TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTK 604
            TLSTD+LFGLVKDIARFRPDLKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEI++T 
Sbjct: 544  TLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTS 603

Query: 605  APEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIIC 664
            APEADY+DAAIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIIC
Sbjct: 604  APEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIIC 663

Query: 665  PIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTG 724
            PIYANLP+ELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTG
Sbjct: 664  PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 723

Query: 725  MESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVL 784
            MESL ++PISKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL
Sbjct: 724  MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 783

Query: 785  TLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLS 844
             LKSLGIHDL+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLS
Sbjct: 784  ALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLS 843

Query: 845  KMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 904
            KM+V S+K+KCSDE+ISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV
Sbjct: 844  KMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 903

Query: 905  YNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTII 964
            Y+SW+ETN+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I+
Sbjct: 904  YSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIV 963

Query: 965  SGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTEL 1024
            +G+FPH+ KLQKNGSYRT+KHPQTVHIHP+SGL+QVLPRWVVYHELV TSKEYMRQVTEL
Sbjct: 964  AGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 1023

Query: 1025 KPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRAS 1058
            KPEWL+E+APH+YQLKDVED +SKKMP+G G+A+
Sbjct: 1024 KPEWLIELAPHYYQLKDVEDAASKKMPKGAGKAA 1043

[Close]

BLAST of MS002020 vs. ExPASy Swiss-Prot
Match: F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)

HSP 1 Score: 1525.0 bits (3947), Expect = 0.0e+00
Identity = 778/1054 (73.81%), Postives = 914/1054 (86.72%), Query Frame = 0


Query: 3    GENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAF 62
            G ND+ TW+SD+LM LLGFSQ  VVQY+I ++KQ+ SP ++V +L V+ G   S +T AF
Sbjct: 2    GSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVREL-VECGFSLSGDTRAF 61

Query: 63   AEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSA 122
            AEE+++R PR K+ G+NLYQ+QE EAA+L +KQKT++LL+AD DED+      N  K S 
Sbjct: 62   AEEIYARAPR-KTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDE-----NNVKKQS- 121

Query: 123  GMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEER 182
              AS   + +  +KRFRKKSE  ED+DD  E V+ RED++  RR  S ++DDG ESEEER
Sbjct: 122  --ASKTGKSDKGQKRFRKKSEQLEDDDD--EVVIVREDKRNVRRKVSEDEDDGTESEEER 181

Query: 183  LRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQE 242
            LRDQRERE+LEQ++RERD A TRKLTE K+S+KE++E +RR  A++   I++LRK S QE
Sbjct: 182  LRDQREREELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQE 241

Query: 243  YLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEY 302
            Y+KKR++KK+ E++DDIEDE YLF   KLTE E RE RYK+EIYEL+KK T E D++ EY
Sbjct: 242  YMKKRKQKKVLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEY 301

Query: 303  RMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNK 362
            RMP+AYDQ+G V+Q+KRFAV++QRYRD G+A+KMNPFAEQEAWE+HQI  A +KFG+KN 
Sbjct: 302  RMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKN- 361

Query: 363  KQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYP 422
            K+ SD+Y+FVFEDQI+FIKASV+ GD + DE   +  + S  KSA   LQE+RK LPIY 
Sbjct: 362  KEVSDNYEFVFEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYT 421

Query: 423  YRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAAR 482
            YRDQLL AV D+QVL+IVGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+AAR
Sbjct: 422  YRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAAR 481

Query: 483  VSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHE 542
            V+QE+G KLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE LGEPDL SYSVI+VDEAHE
Sbjct: 482  VAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHE 541

Query: 543  RTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFT 602
            RTL TD+LFGLVKDIAR RPDLKLLISSAT+DAEKFSD+FD APIF+ PGRRYPV+I FT
Sbjct: 542  RTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFT 601

Query: 603  KAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELII 662
             APEADY+DAAI T L IHV +P GD+LVFL GQEEIEA EE +KH+ RGLGTKI ELII
Sbjct: 602  TAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELII 661

Query: 663  CPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRT 722
            CPIYANLP+ELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRT
Sbjct: 662  CPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRT 721

Query: 723  GMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVV 782
            GMESL V+PISKASA QR GR+GRT PG C+RLYTA++YYN++EDNTVPEIQRTNLA+VV
Sbjct: 722  GMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVV 781

Query: 783  LTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPML 842
            L+LKSLGIH+L+NFDFMD PPSEAL+K+LELL+ALGALN+LGELTK GRRMAEFPLDPML
Sbjct: 782  LSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPML 841

Query: 843  SKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLK 902
            SKM+V S+K+KCSDE+ISIAAMLSIG SIFYRPKDKQVHADNA  NFH GNVGDHIA LK
Sbjct: 842  SKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLK 901

Query: 903  VYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTI 962
            +YNSW+ETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SN N+LD+I+K+I
Sbjct: 902  IYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSI 961

Query: 963  ISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTE 1022
            ++G+FPH+ KLQKNGSYRT+KHPQTVHIHP+SGL+QVLPRWVVYH+LV TSKEYMRQVTE
Sbjct: 962  VAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTE 1021

Query: 1023 LKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRA 1057
            LKPEWL+EIAPH+YQLKDVED +SKKMP+  GRA
Sbjct: 1022 LKPEWLIEIAPHYYQLKDVEDATSKKMPKTSGRA 1042

[Close]

BLAST of MS002020 vs. ExPASy Swiss-Prot
Match: Q767K6 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 GN=DHX16 PE=3 SV=1)

HSP 1 Score: 1057.7 bits (2734), Expect = 8.4e-308
Identity = 572/1067 (53.61%), Postives = 779/1067 (73.01%), Query Frame = 0


Query: 7    MKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEEM 66
            ++ W+ D+L S+LG S+  V Q++IG +++ AS  + V +L     L  S     FA ++
Sbjct: 7    LERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPARDFALKL 66

Query: 67   FSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGMAS 126
            +++VPR K+      +  EREA  L  K ++Y LL  +D E+  EE        + G A 
Sbjct: 67   WNKVPR-KAVAEKPARAAEREARALLEKNRSYRLL--EDSEESSEE--------AVGRAG 126

Query: 127  TPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQV---RRRTTSSEDDDGYE-SEEER 186
            +  + +  K++  +K   +E+E++ +E V E+  +     + +T   E +D +E +E ER
Sbjct: 127  SSLQKKRKKRKHLRKKRQEEEEEEEEEEVPEKGKKTTGGNKPQTEKPESEDEWERTERER 186

Query: 187  LRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDG---IDTLRKVS 246
            L+D  ER+   + +R+RD   TR + E+   +K  +EA +R K  E D    +  LRK S
Sbjct: 187  LQDLEERDAFAERVRQRDKDRTRNVLERS-DKKAYEEAQKRLKMAEEDRKAMVPELRKKS 246

Query: 247  RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKK-----RTD 306
            R+EYL KRE +KLE++  ++ DE++LF  V+L+  E REL+YK+ + +L ++       +
Sbjct: 247  RREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQE 306

Query: 307  EADDIDEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKAT 366
            + +  + Y MPE  +  G   Q  R    ++   +SGA     P  EQ  WEE ++G A+
Sbjct: 307  KLEATNRYHMPE--ETRG---QPTRAVDLVE--EESGA-----PGEEQRRWEEARLGAAS 366

Query: 367  MKFGSKNKKQSSDDYQFVFEDQ--IEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQ 426
            +KFG+++       YQ V E++  IEF++A+ ++GDE     E  +          E +Q
Sbjct: 367  LKFGARDAASQEPKYQLVLEEEETIEFVRATQLQGDE-----EPAAPPAPTQAQQKESIQ 426

Query: 427  EERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQP 486
              R++LP++P+R++LL AV ++Q+L+I GETGSGKTTQIPQYL E GYT++G K+ CTQP
Sbjct: 427  AVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQP 486

Query: 487  RRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLAS 546
            RRVAAMS+AARV++E+GVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLREFL EPDLAS
Sbjct: 487  RRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLAS 546

Query: 547  YSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIP 606
            YSV+MVDEAHERTL TD+LFGL+KD+ARFRP+LK+L++SATLD  +FS +FD AP+F+IP
Sbjct: 547  YSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIP 606

Query: 607  GRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTR 666
            GRR+PV+I +TKAPEADYL+A +V+ LQIHVT+PPGDILVFLTGQEEIEAA E+++ R R
Sbjct: 607  GRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCR 666

Query: 667  GLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPG 726
             LG+KI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPG
Sbjct: 667  RLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPG 726

Query: 727  FSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVP 786
            F K KSYNPRTGMESL V+P SKASANQRAGR+GR   G CFRLYTA++Y +E+E+ TVP
Sbjct: 727  FCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVP 786

Query: 787  EIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGR 846
            EIQRT+L NVVL LKSLGIHDL++FDF+D PP E LL ALE LYALGALN LGELT  GR
Sbjct: 787  EIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 846

Query: 847  RMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHT 906
            +MAE P+DPMLSKM++ASEK+ CS+E++++AAMLS+ NSIFYRPKDK VHADNAR+NF  
Sbjct: 847  KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 906

Query: 907  GNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSN 966
               GDH+ LL VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ L+S 
Sbjct: 907  PG-GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSC 966

Query: 967  LNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVC 1026
              D   ++K I +GYF H+ +L ++G YRT+K  QTV IHP+S L +  PRW++YHELV 
Sbjct: 967  QGDYIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVL 1026

Query: 1027 TSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASE 1059
            T+KE+MRQV E++  WL+E+APH+Y+ K++ED  +KKMP+  G+  E
Sbjct: 1027 TTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTRE 1042

[Close]

BLAST of MS002020 vs. ExPASy Swiss-Prot
Match: F4JMJ3 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsis thaliana OX=3702 GN=At4g16680 PE=2 SV=2)

HSP 1 Score: 1047.0 bits (2706), Expect = 1.5e-304
Identity = 548/878 (62.41%), Postives = 672/878 (76.54%), Query Frame = 0


Query: 195  NIRERDAAGTRKLTEQKLSRKEEDEAIRRS---KALENDGIDTLRKVSRQEYLKKREEKK 254
            NI ++ +   R+++ ++   +E++   + S   K L +D I  LR+VSR++YL  RE KK
Sbjct: 40   NIPKKISTKRRRISVEEEEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKK 99

Query: 255  LEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRMPEAYDQE 314
            +EE+RD+ +D+                                  DD++ YR P+AYDQE
Sbjct: 100  VEELRDERKDD----------------------------------DDVEGYRFPDAYDQE 159

Query: 315  GGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSSDDYQF 374
            G ++Q KRF VA +RY +   + ++    EQEAWE+HQ  KA ++FG+K+KKQ  D Y+F
Sbjct: 160  GCIDQKKRFDVAKERYCERRRSGRV--VTEQEAWEDHQAQKARVRFGAKDKKQVVDGYEF 219

Query: 375  VFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAV 434
            VF+D   F++ S         E ET       +K+A EK +E R+ LPI+ YR++LL+ +
Sbjct: 220  VFDDLTGFVEES--------SEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLI 279

Query: 435  NDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKL 494
             + QVLVIVGETGSGKTTQIPQYL EAGYTKRGK+GCTQPRRVAAMS+A+RV+QE+GVKL
Sbjct: 280  EENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKL 339

Query: 495  GHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLF 554
            GHEVGYSIRFEDCTS+KTV+KYMTDGMLLRE L EP L SYSVI++DEAHERTLSTD+LF
Sbjct: 340  GHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILF 399

Query: 555  GLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLD 614
             LVKD+A+ RPDL+L+ISSATL+A+KFS+YFDSA I+ IPGRRYPVE  F K PE DYL+
Sbjct: 400  ALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLE 459

Query: 615  AAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPT 674
              I T +QIH T+  GDILVFLTGQEEIE  E  +K R   LGTK +E+IICPIY+NLPT
Sbjct: 460  TVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPT 519

Query: 675  ELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSP 734
             LQAK+FEP P G RKVVLATNIAETSLTIDG+KYVIDPG+ KI SYNPRTGMESL V+P
Sbjct: 520  PLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTP 579

Query: 735  ISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIH 794
            ISKASA QRAGRSGRTGPG CFRLY       ++E  T+PEIQR NLA+VVLTLKSLGI 
Sbjct: 580  ISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQ 639

Query: 795  DLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLSKMMVASEK 854
            D+ NFDFMD PP  ALLKALELLYALGAL+++GE+TK+G RM EFP+DPMLSKM+V SEK
Sbjct: 640  DVFNFDFMDPPPENALLKALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEK 699

Query: 855  FKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFH--TGNVGDHIALLKVYNSWRE 914
            +KCS E+I+IAAMLS+GNS+FYRPK++QV AD ARM+F+  T NVGDHIALL+VYNSW+E
Sbjct: 700  YKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKE 759

Query: 915  TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGYFPH 974
             NYSTQWC E +IQ +SMKRARDIRDQL GLL ++ +ELTSN NDLDAIKK I++G+FPH
Sbjct: 760  ENYSTQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPH 819

Query: 975  SGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLP-RWVVYHELVCTSKEYMRQVTELKPEWL 1034
            S KLQKNGSYR +K PQTV++HP+SGL    P +W+VYHELV T+KEYMR  TE+KPEWL
Sbjct: 820  SAKLQKNGSYRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWL 869

Query: 1035 VEIAPHFYQLKDVEDLSSKKMPR--GEGRASEIGXRKK 1065
            +EIAPH+Y+LKD+ED   KK  R   E   S++   KK
Sbjct: 880  IEIAPHYYKLKDIEDTRPKKTQRRIEEASTSKVDTNKK 869

[Close]

BLAST of MS002020 vs. ExPASy Swiss-Prot
Match: O60231 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=9606 GN=DHX16 PE=1 SV=2)

HSP 1 Score: 1047.0 bits (2706), Expect = 1.5e-304
Identity = 568/1064 (53.38%), Postives = 778/1064 (73.12%), Query Frame = 0


Query: 7    MKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEEM 66
            ++ W+ D+L S+LG S+  V Q++IG +++  S  + V +L     L  S     FA  +
Sbjct: 7    LERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPARDFALRL 66

Query: 67   FSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGMAS 126
            +++VPR K+      +  EREA  L  K ++Y LL  +D E+  EE    +        S
Sbjct: 67   WNKVPR-KAVVEKPARAAEREARALLEKNRSYRLL--EDSEESSEETVSRA-------GS 126

Query: 127  TPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYE-SEEERLRD 186
            + ++    +K  RKK E +E+E+ +++   +++    +++T   E +D +E +E ERL+D
Sbjct: 127  SLQKKRKKRKHLRKKREEEEEEEASEKG--KKKTGGSKQQTEKPESEDEWERTERERLQD 186

Query: 187  QREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDG---IDTLRKVSRQE 246
              ER+   + +R+RD   TR + E+   +K  +EA +R K  E D    +  LRK SR+E
Sbjct: 187  LEERDAFAERVRQRDKDRTRNVLERS-DKKAYEEAQKRLKMAEEDRKAMVPELRKKSRRE 246

Query: 247  YLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKK-----RTDEAD 306
            YL KRE +KLE++  ++ DE++LF  V+L+  E +EL+YK+ + +L ++       ++ +
Sbjct: 247  YLAKREREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLE 306

Query: 307  DIDEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKF 366
              + Y MP+  +  G   Q  R    ++   +SGA     P  EQ  WEE ++G A++KF
Sbjct: 307  ATNRYHMPK--ETRG---QPARAVDLVE--EESGA-----PGEEQRRWEEARLGAASLKF 366

Query: 367  GSKNKKQSSDDYQFVFEDQ--IEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEER 426
            G+++       YQ V E++  IEF++A+ ++GDE      T +  + K     E +Q  R
Sbjct: 367  GARDAASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQK-----ESIQAVR 426

Query: 427  KTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQPRRV 486
            ++LP++P+R++LL A+ ++QVL+I GETGSGKTTQIPQYL E GYT +G K+ CTQPRRV
Sbjct: 427  RSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRV 486

Query: 487  AAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSV 546
            AAMS+AARV++E+GVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLREFL EPDLASYSV
Sbjct: 487  AAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 546

Query: 547  IMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRR 606
            +MVDEAHERTL TD+LFGL+KD+ARFRP+LK+L++SAT+D  +FS +FD AP+F+IPGRR
Sbjct: 547  VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 606

Query: 607  YPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLG 666
            +PV+I +TKAPEADYL+A +V+ LQIHVT+PPGDILVFLTGQEEIEAA E+++ R R LG
Sbjct: 607  FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 666

Query: 667  TKIAELIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSK 726
            +KI EL++ PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K
Sbjct: 667  SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCK 726

Query: 727  IKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQ 786
             KSYNPRTGMESL V+P SKASANQRAGR+GR   G CFRLYTA++Y +E+E+ TVPEIQ
Sbjct: 727  QKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQ 786

Query: 787  RTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMA 846
            RT+L NVVL LKSLGIHDL++FDF+D PP E LL ALE LYALGALN LGELT  GR+MA
Sbjct: 787  RTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMA 846

Query: 847  EFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNV 906
            E P+DPMLSKM++ASEK+ CS+E++++AAMLS+ NSIFYRPKDK VHADNAR+NF     
Sbjct: 847  ELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG- 906

Query: 907  GDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLND 966
            GDH+ LL VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ L+S   D
Sbjct: 907  GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGD 966

Query: 967  LDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSK 1026
               ++K I +GYF H+ +L ++G YRT+K  QTV IHP+S L +  PRW++YHELV T+K
Sbjct: 967  YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTK 1026

Query: 1027 EYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASE 1059
            E+MRQV E++  WL+E+APH+Y+ K++ED  +KKMP+  G+  E
Sbjct: 1027 EFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1038

[Close]

BLAST of MS002020 vs. ExPASy TrEMBL
Match: A0A6J1BZI7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007026 PE=4 SV=1)

HSP 1 Score: 2040.4 bits (5285), Expect = 0.0e+00
Identity = 1057/1060 (99.72%), Postives = 1057/1060 (99.72%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL
Sbjct: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGN DKF
Sbjct: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNGDKF 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
            SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE
Sbjct: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ERLRDQREREQLEQNIRERDAAGTRKLTE KLSRKEEDEAIRRSKALENDGIDTLRKVSR
Sbjct: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEPKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSG ADKMNPFAEQEAWEEHQIGKATMKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGTADKMNPFAEQEAWEEHQIGKATMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI
Sbjct: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV
Sbjct: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1060

[Close]

BLAST of MS002020 vs. ExPASy TrEMBL
Match: A0A1S3BVU3 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=3656 GN=LOC103494032 PE=4 SV=1)

HSP 1 Score: 1920.2 bits (4973), Expect = 0.0e+00
Identity = 996/1060 (93.96%), Postives = 1031/1060 (97.26%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGEND+KTW+SDQLMSLLGFSQPT+VQYMIGLSKQA SPADVV+KLV+DF LPSS ETL
Sbjct: 1    MGGENDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRK+SSGLNLYQKQEREAA+LARKQKTYALLDA DDEDDVE+KG +SD  
Sbjct: 61   AFAEGIFSRVPRKQSSGLNLYQKQEREAAMLARKQKTYALLDA-DDEDDVEDKGRSSDL- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                    +E EN K+ FR+K+E+QEDEDD KES LERE+RQV+RR +SSEDD   ESEE
Sbjct: 121  --------KETENRKRHFRRKNEYQEDEDDEKESALERENRQVKRRASSSEDDSS-ESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ERLRDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRS+ALEN+GIDTLRKVSR
Sbjct: 181  ERLRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENNGIDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLT+AEYRELRYKKEIYELVKKRTDEADD++
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTDAEYRELRYKKEIYELVKKRTDEADDVN 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDER+TESLEKSKA+SALEKLQEERKTLPI
Sbjct: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGME+LQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETN+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRT+KHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV
Sbjct: 961  TIISGFFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRG+GRA   G
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGQGRAGAPG 1049

[Close]

BLAST of MS002020 vs. ExPASy TrEMBL
Match: A0A0A0LUM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1)

HSP 1 Score: 1917.9 bits (4967), Expect = 0.0e+00
Identity = 996/1061 (93.87%), Postives = 1029/1061 (96.98%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGEND+KTW+SDQLMSLLGFSQPT+VQYMIGLSKQA SPADVV+KLV+DF LPSS ETL
Sbjct: 1    MGGENDLKTWVSDQLMSLLGFSQPTIVQYMIGLSKQATSPADVVNKLVIDFSLPSSGETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRK+SSGLNLYQKQEREAA+LARKQ TYALLDA DDEDDVE+KG +SD  
Sbjct: 61   AFAEGIFSRVPRKQSSGLNLYQKQEREAAMLARKQTTYALLDA-DDEDDVEDKGRSSDL- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRR-TTSSEDDDGYESE 180
                    +E EN KK FR+K+E+QEDEDD KES LERE+RQV+RR   SS +D+  ESE
Sbjct: 121  --------KETENRKKHFRRKNEYQEDEDDEKESALERENRQVKRRQRASSSEDESSESE 180

Query: 181  EERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVS 240
            EERLRDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRS+ALENDGIDTLRKVS
Sbjct: 181  EERLRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSEALENDGIDTLRKVS 240

Query: 241  RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDI 300
            RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLT+AEYREL+YKKEIYELVKKRTDEADDI
Sbjct: 241  RQEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTDAEYRELKYKKEIYELVKKRTDEADDI 300

Query: 301  DEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS 360
            +EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS
Sbjct: 301  NEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGS 360

Query: 361  KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLP 420
            KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDER+TESLEKSKA+SALEKLQEERKTLP
Sbjct: 361  KNKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERQTESLEKSKAQSALEKLQEERKTLP 420

Query: 421  IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI 480
            IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI
Sbjct: 421  IYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSI 480

Query: 481  AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDE 540
            AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSV+MVDE
Sbjct: 481  AARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVVMVDE 540

Query: 541  AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 600
            AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI
Sbjct: 541  AHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI 600

Query: 601  HFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE 660
            +FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE
Sbjct: 601  NFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAE 660

Query: 661  LIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN 720
            LIICPIYANLPTELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN
Sbjct: 661  LIICPIYANLPTELQAKIFEPTPDGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYN 720

Query: 721  PRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA 780
            PRTGME+LQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA
Sbjct: 721  PRTGMEALQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLA 780

Query: 781  NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD 840
            NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD
Sbjct: 781  NVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLD 840

Query: 841  PMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 900
            PMLSKMMVASEKFKCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA
Sbjct: 841  PMLSKMMVASEKFKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIA 900

Query: 901  LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK 960
            LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK
Sbjct: 901  LLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIK 960

Query: 961  KTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ 1020
            KTIISGYFPHS KLQKNGSYRT+KHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ
Sbjct: 961  KTIISGYFPHSAKLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQ 1020

Query: 1021 VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASEIG 1061
            VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRG+GRAS  G
Sbjct: 1021 VTELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGQGRASAPG 1051

[Close]

BLAST of MS002020 vs. ExPASy TrEMBL
Match: A0A6J1F0A9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440982 PE=4 SV=1)

HSP 1 Score: 1911.3 bits (4950), Expect = 0.0e+00
Identity = 994/1058 (93.95%), Postives = 1025/1058 (96.88%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGENDMKTWISDQLMSLLGFSQPT+VQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL
Sbjct: 1    MGGENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRKKS+GLNLYQKQEREAAILAR QK Y LLDA DDE+ +E+KGG+ D  
Sbjct: 61   AFAEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDA-DDEEVLEDKGGSGD-- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                   PRE EN KKRFRKK+E+QEDEDD +ES LERE+RQV+RRT+SSE DDG ESEE
Sbjct: 121  -------PRETENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSE-DDGSESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ER RDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRSKALENDG DTLRKVSR
Sbjct: 181  ERQRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLF+GVKLTE EYRELRYKKEIYELVKKRTDEAD+I+
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRTDEADEIN 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWE+HQIGKA+MKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEDHQIGKASMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQ +DDYQFVFEDQIEFIKASVMEGDEFVDE + ESLEKSKAKSALEKLQEERKTLPI
Sbjct: 361  NKKQ-ADDYQFVFEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKT+LKYMTDGMLLREFLGEPDLASYSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTP+GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTK+GRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEK KCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRW VYHELVCTSKEYMRQV
Sbjct: 961  TIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASE 1059
            TELKPEWLVEIAPHFYQLKDVEDLS KKMPRG+GR +E
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1046

[Close]

BLAST of MS002020 vs. ExPASy TrEMBL
Match: A0A6J1KTQ9 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498124 PE=4 SV=1)

HSP 1 Score: 1907.1 bits (4939), Expect = 0.0e+00
Identity = 992/1058 (93.76%), Postives = 1023/1058 (96.69%), Query Frame = 0


Query: 1    MGGENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60
            MGGENDMKTWISDQLMSLLGFSQPT+VQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL
Sbjct: 1    MGGENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETL 60

Query: 61   AFAEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKF 120
            AFAE +FSRVPRKKS+GLNLYQKQEREAAILAR QK Y LLDA DDE+ +E+KGG+ D  
Sbjct: 61   AFAEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDA-DDEEVLEDKGGSGD-- 120

Query: 121  SAGMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEE 180
                   PRE EN KKRFRKK+E+QEDEDD +ES LERE+RQV+RRT+SSE DDG ESEE
Sbjct: 121  -------PRETENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSE-DDGSESEE 180

Query: 181  ERLRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSR 240
            ER RDQREREQLE+NIRERDAAGT+KLTEQKLSRKEE+EAIRRSKALENDG DTLRKVSR
Sbjct: 181  ERQRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSR 240

Query: 241  QEYLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDID 300
            QEYLKKREEKKLEEIRDDIEDEQYLF+GVKLTE EYRELRYKKEIYELVKKR DEAD+I+
Sbjct: 241  QEYLKKREEKKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEIN 300

Query: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSK 360
            EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKA+MKFGSK
Sbjct: 301  EYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSK 360

Query: 361  NKKQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPI 420
            NKKQ +DDYQFVFEDQIEFIKASVMEGDEFVDE + ESLEKSKAKSALEKLQEERKTLPI
Sbjct: 361  NKKQ-ADDYQFVFEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPI 420

Query: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480
            YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA
Sbjct: 421  YPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIA 480

Query: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEA 540
            ARVSQELGVKLGHEVGYSIRFEDCTSDKT+LKYMTDGMLLREFLGEPDLA YSVIMVDEA
Sbjct: 481  ARVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEA 540

Query: 541  HERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIH 600
            HERTLSTDVLFGLVKDIARFRP+LKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEI+
Sbjct: 541  HERTLSTDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIN 600

Query: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660
            FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL
Sbjct: 601  FTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAEL 660

Query: 661  IICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720
            IICPIYANLPTELQAKIFEPTP+GARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP
Sbjct: 661  IICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNP 720

Query: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780
            RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN
Sbjct: 721  RTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLAN 780

Query: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDP 840
            VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTK+GRRMAEFPLDP
Sbjct: 781  VVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDP 840

Query: 841  MLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900
            MLSKMMVASEK KCSDE+ISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL
Sbjct: 841  MLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 900

Query: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960
            LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK
Sbjct: 901  LKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKK 960

Query: 961  TIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQV 1020
            TIISG+FPHS KLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRW VYHELVCTSKEYMRQV
Sbjct: 961  TIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQV 1020

Query: 1021 TELKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRASE 1059
            TELKPEWLVEIAPHFYQLKDVEDLS KKMPRG+GR +E
Sbjct: 1021 TELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1046

[Close]

BLAST of MS002020 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 1578.5 bits (4086), Expect = 0.0e+00
Identity = 803/1054 (76.19%), Postives = 943/1054 (89.47%), Query Frame = 0


Query: 5    NDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 64
            ND+KTW+SD+LM LLG+SQ  VV Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 65   EMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGM 124
            E+F+RVPR K++G+NLYQK E EAA+L RKQKTYALLDADDDED+V  +  +S       
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS------- 123

Query: 125  ASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLR 184
             S  R+ +  KKRFRKKS  Q DE D + +V E + R VRR+   SE+DDG ESEEER+R
Sbjct: 124  VSESRKSDKGKKRFRKKS-GQSDESDGEVAVRE-DSRHVRRKV--SEEDDGSESEEERVR 183

Query: 185  DQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYL 244
            DQ+ERE+LEQ++++RD A TRKLTEQ LS+KE++EA+RR+ ALE D + +LRKVSRQEYL
Sbjct: 184  DQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYL 243

Query: 245  KKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRM 304
            KKRE+KKL+E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKRT + D+++EYR+
Sbjct: 244  KKREQKKLDELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYRI 303

Query: 305  PEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQ 364
            P+AYDQEGGV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKAT+KFG+KN KQ
Sbjct: 304  PDAYDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKN-KQ 363

Query: 365  SSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKA-KSALEKLQEERKTLPIYPY 424
            +SDDYQFVFEDQI FIK SVM G+ + D  + +   +  A K+ALE+LQE R++LPIY Y
Sbjct: 364  ASDDYQFVFEDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTY 423

Query: 425  RDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARV 484
            RDQLL+AV ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV
Sbjct: 424  RDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARV 483

Query: 485  SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHER 544
            +QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE LGEPDLASYSV++VDEAHER
Sbjct: 484  AQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHER 543

Query: 545  TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTK 604
            TLSTD+LFGLVKDIARFRPDLKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEI++T 
Sbjct: 544  TLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTS 603

Query: 605  APEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIIC 664
            APEADY+DAAIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIIC
Sbjct: 604  APEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIIC 663

Query: 665  PIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTG 724
            PIYANLP+ELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTG
Sbjct: 664  PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 723

Query: 725  MESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVL 784
            MESL ++PISKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL
Sbjct: 724  MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 783

Query: 785  TLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLS 844
             LKSLGIHDL+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLS
Sbjct: 784  ALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLS 843

Query: 845  KMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 904
            KM+V S+K+KCSDE+ISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV
Sbjct: 844  KMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 903

Query: 905  YNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTII 964
            Y+SW+ETN+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I+
Sbjct: 904  YSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIV 963

Query: 965  SGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTEL 1024
            +G+FPH+ KLQKNGSYRT+KHPQTVHIHP+SGL+QVLPRWVVYHELV TSKEYMRQVTEL
Sbjct: 964  AGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 1023

Query: 1025 KPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRAS 1058
            KPEWL+E+APH+YQLKDVED +SKKMP+G G+A+
Sbjct: 1024 KPEWLIELAPHYYQLKDVEDAASKKMPKGAGKAA 1043

[Close]

BLAST of MS002020 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 1552.3 bits (4018), Expect = 0.0e+00
Identity = 795/1054 (75.43%), Postives = 933/1054 (88.52%), Query Frame = 0


Query: 5    NDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 64
            ND+KTW+SD+LM LLG+SQ  VV Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 65   EMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSAGM 124
            E+F+RVPR K++G+NLYQK E EAA+L RKQKTYALLDADDDED+V  +  +S       
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSS------- 123

Query: 125  ASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEERLR 184
             S  R+ +  KKRFRKKS  Q DE D + +V E + R VRR+   SE+DDG ESEEER+R
Sbjct: 124  VSESRKSDKGKKRFRKKS-GQSDESDGEVAVRE-DSRHVRRKV--SEEDDGSESEEERVR 183

Query: 185  DQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQEYL 244
            DQ+ERE+LEQ++++RD A TRKLTEQ LS+KE++EA+RR+ ALE D + +LRKVSRQEYL
Sbjct: 184  DQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYL 243

Query: 245  KKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRM 304
            KKRE+KKL+E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKRT + D++     
Sbjct: 244  KKREQKKLDELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNV----- 303

Query: 305  PEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQ 364
                 +EGGV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKAT+KFG+KN KQ
Sbjct: 304  -----EEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKN-KQ 363

Query: 365  SSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKA-KSALEKLQEERKTLPIYPY 424
            +SDDYQFVFEDQI FIK SVM G+ + D  + +   +  A K+ALE+LQE R++LPIY Y
Sbjct: 364  ASDDYQFVFEDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTY 423

Query: 425  RDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARV 484
            RDQLL+AV ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV
Sbjct: 424  RDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARV 483

Query: 485  SQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHER 544
            +QE+GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE LGEPDLASYSV++VDEAHER
Sbjct: 484  AQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHER 543

Query: 545  TLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTK 604
            TLSTD+LFGLVKDIARFRPDLKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEI++T 
Sbjct: 544  TLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTS 603

Query: 605  APEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIIC 664
            APEADY+DAAIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIIC
Sbjct: 604  APEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIIC 663

Query: 665  PIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTG 724
            PIYANLP+ELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTG
Sbjct: 664  PIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTG 723

Query: 725  MESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVL 784
            MESL ++PISKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL
Sbjct: 724  MESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVL 783

Query: 785  TLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPMLS 844
             LKSLGIHDL+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLS
Sbjct: 784  ALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLS 843

Query: 845  KMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 904
            KM+V S+K+KCSDE+ISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV
Sbjct: 844  KMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKV 903

Query: 905  YNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTII 964
            Y+SW+ETN+STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I+
Sbjct: 904  YSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIV 963

Query: 965  SGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTEL 1024
            +G+FPH+ KLQKNGSYRT+KHPQTVHIHP+SGL+QVLPRWVVYHELV TSKEYMRQVTEL
Sbjct: 964  AGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 1023

Query: 1025 KPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRAS 1058
            KPEWL+E+APH+YQLKDVED +SKKMP+G G+A+
Sbjct: 1024 KPEWLIELAPHYYQLKDVEDAASKKMPKGAGKAA 1033

[Close]

BLAST of MS002020 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 1525.0 bits (3947), Expect = 0.0e+00
Identity = 778/1054 (73.81%), Postives = 914/1054 (86.72%), Query Frame = 0


Query: 3    GENDMKTWISDQLMSLLGFSQPTVVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAF 62
            G ND+ TW+SD+LM LLGFSQ  VVQY+I ++KQ+ SP ++V +L V+ G   S +T AF
Sbjct: 2    GSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVREL-VECGFSLSGDTRAF 61

Query: 63   AEEMFSRVPRKKSSGLNLYQKQEREAAILARKQKTYALLDADDDEDDVEEKGGNSDKFSA 122
            AEE+++R PR K+ G+NLYQ+QE EAA+L +KQKT++LL+AD DED+      N  K S 
Sbjct: 62   AEEIYARAPR-KTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDE-----NNVKKQS- 121

Query: 123  GMASTPREVENHKKRFRKKSEHQEDEDDNKESVLEREDRQVRRRTTSSEDDDGYESEEER 182
              AS   + +  +KRFRKKSE  ED+DD  E V+ RED++  RR  S ++DDG ESEEER
Sbjct: 122  --ASKTGKSDKGQKRFRKKSEQLEDDDD--EVVIVREDKRNVRRKVSEDEDDGTESEEER 181

Query: 183  LRDQREREQLEQNIRERDAAGTRKLTEQKLSRKEEDEAIRRSKALENDGIDTLRKVSRQE 242
            LRDQRERE+LEQ++RERD A TRKLTE K+S+KE++E +RR  A++   I++LRK S QE
Sbjct: 182  LRDQREREELEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQE 241

Query: 243  YLKKREEKKLEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEY 302
            Y+KKR++KK+ E++DDIEDE YLF   KLTE E RE RYK+EIYEL+KK T E D++ EY
Sbjct: 242  YMKKRKQKKVLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEY 301

Query: 303  RMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNK 362
            RMP+AYDQ+G V+Q+KRFAV++QRYRD G+A+KMNPFAEQEAWE+HQI  A +KFG+KN 
Sbjct: 302  RMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKN- 361

Query: 363  KQSSDDYQFVFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYP 422
            K+ SD+Y+FVFEDQI+FIKASV+ GD + DE   +  + S  KSA   LQE+RK LPIY 
Sbjct: 362  KEVSDNYEFVFEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYT 421

Query: 423  YRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAAR 482
            YRDQLL AV D+QVL+IVGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+AAR
Sbjct: 422  YRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAAR 481

Query: 483  VSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHE 542
            V+QE+G KLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE LGEPDL SYSVI+VDEAHE
Sbjct: 482  VAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHE 541

Query: 543  RTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFT 602
            RTL TD+LFGLVKDIAR RPDLKLLISSAT+DAEKFSD+FD APIF+ PGRRYPV+I FT
Sbjct: 542  RTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFT 601

Query: 603  KAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELII 662
             APEADY+DAAI T L IHV +P GD+LVFL GQEEIEA EE +KH+ RGLGTKI ELII
Sbjct: 602  TAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELII 661

Query: 663  CPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRT 722
            CPIYANLP+ELQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRT
Sbjct: 662  CPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRT 721

Query: 723  GMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVV 782
            GMESL V+PISKASA QR GR+GRT PG C+RLYTA++YYN++EDNTVPEIQRTNLA+VV
Sbjct: 722  GMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVV 781

Query: 783  LTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLGRRMAEFPLDPML 842
            L+LKSLGIH+L+NFDFMD PPSEAL+K+LELL+ALGALN+LGELTK GRRMAEFPLDPML
Sbjct: 782  LSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPML 841

Query: 843  SKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLK 902
            SKM+V S+K+KCSDE+ISIAAMLSIG SIFYRPKDKQVHADNA  NFH GNVGDHIA LK
Sbjct: 842  SKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLK 901

Query: 903  VYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTI 962
            +YNSW+ETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SN N+LD+I+K+I
Sbjct: 902  IYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSI 961

Query: 963  ISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELVCTSKEYMRQVTE 1022
            ++G+FPH+ KLQKNGSYRT+KHPQTVHIHP+SGL+QVLPRWVVYH+LV TSKEYMRQVTE
Sbjct: 962  VAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTE 1021

Query: 1023 LKPEWLVEIAPHFYQLKDVEDLSSKKMPRGEGRA 1057
            LKPEWL+EIAPH+YQLKDVED +SKKMP+  GRA
Sbjct: 1022 LKPEWLIEIAPHYYQLKDVEDATSKKMPKTSGRA 1042

[Close]

BLAST of MS002020 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 775.0 bits (2000), Expect = 7.7e-224
Identity = 371/638 (58.15%), Postives = 496/638 (77.74%), Query Frame = 0


Query: 411  LQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQ 470
            +QE+R++LPIY  + +L+QAV+D QVLV++GETGSGKTTQ+ QYL EAGYT +GK+GCTQ
Sbjct: 508  IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567

Query: 471  PRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLA 530
            PRRVAAMS+A RV++E G +LG EVGY+IRFEDCT   TV+KYMTDGMLLRE L + +L+
Sbjct: 568  PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627

Query: 531  SYSVIMVDEAHERTLSTDVLFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKI 590
             YSVIM+DEAHERT+ TDVLFGL+K + + R DL+L+++SATLDAEKFS YF +  IF I
Sbjct: 628  QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687

Query: 591  PGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRT 650
            PGR +PVEI +TK PE DYLDAA++T LQIH+T+P GDILVFLTGQEEI++A + +  R 
Sbjct: 688  PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747

Query: 651  RGLGTKIAELIICPIYANLPTELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDP 710
            +GLG  + ELII P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 748  KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807

Query: 711  GFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTV 770
            GF+K   YNP+ G+ESL ++PIS+ASA QRAGR+GRTGPG C+RLYT  +Y NEM   ++
Sbjct: 808  GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867

Query: 771  PEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKLG 830
            PEIQR NL    LT+K++GI+DL++FDFMD P  +AL+ A+E LY+LGAL++ G LTKLG
Sbjct: 868  PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927

Query: 831  RRMAEFPLDPMLSKMMVASEKFKCSDEVISIAAMLSIGNSIFYRPKDKQVHADNARMNFH 890
            R+MAEFPL+P LSKM++AS    CSDE++++ AM+  GN IFYRP++KQ  AD  R  F 
Sbjct: 928  RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 987

Query: 891  TGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTS 950
                GDH+ LL VY +W+  N+S  WC+EN+IQ RS++RA+D+R QL  ++++ ++++ +
Sbjct: 988  QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1047

Query: 951  NLNDLDAIKKTIISGYFPHSGKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWVVYHELV 1010
               +   I+K I +G+F H  +      YRT+   Q V+IHPSS L Q  P WV+YH+LV
Sbjct: 1048 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1107

Query: 1011 CTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSSKK 1049
             T+KEYMR+VT + P+WLVE+AP F+++ D   +S +K
Sbjct: 1108 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1143

[Close]

BLAST of MS002020 vs. TAIR 10
Match: AT4G16680.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 704.5 bits (1817), Expect = 1.3e-202
Identity = 383/637 (60.13%), Postives = 467/637 (73.31%), Query Frame = 0


Query: 195 NIRERDAAGTRKLTEQKLSRKEEDEAIRRS---KALENDGIDTLRKVSRQEYLKKREEKK 254
           NI ++ +   R+++ ++   +E++   + S   K L +D I  LR+VSR++YL  RE KK
Sbjct: 40  NIPKKISTKRRRISVEEEEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKK 99

Query: 255 LEEIRDDIEDEQYLFEGVKLTEAEYRELRYKKEIYELVKKRTDEADDIDEYRMPEAYDQE 314
           +EE+RD+                                           YR P+AYDQE
Sbjct: 100 VEELRDE-----------------------------------------RRYRFPDAYDQE 159

Query: 315 GGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKATMKFGSKNKKQSSDDYQF 374
           G ++Q KRF VA +RY +   + ++    EQEAWE+HQ  KA ++FG+K+KKQ  D Y+F
Sbjct: 160 GCIDQKKRFDVAKERYCERRRSGRV--VTEQEAWEDHQAQKARVRFGAKDKKQVVDGYEF 219

Query: 375 VFEDQIEFIKASVMEGDEFVDERETESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAV 434
           VF+D   F++ S         E ET       +K+A EK +E R+ LPI+ YR++LL+ +
Sbjct: 220 VFDDLTGFVEES--------SEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLI 279

Query: 435 NDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKL 494
            + QVLVIVGETGSGKTTQIPQYL EAGYTKRGK+GCTQPRRVAAMS+A+RV+QE+GVKL
Sbjct: 280 EENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKL 339

Query: 495 GHEVGYSIRFEDCTSDKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDVLF 554
           GHEVGYSIRFEDCTS+KTV+KYMTDGMLLRE L EP L SYSVI++DEAHERTLSTD+LF
Sbjct: 340 GHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILF 399

Query: 555 GLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLD 614
            LVKD+A+ RPDL+L+ISSATL+A+KFS+YFDSA I+ IPGRRYPVE  F K PE DYL+
Sbjct: 400 ALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLE 459

Query: 615 AAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPT 674
             I T +QIH T+  GDILVFLTGQEEIE  E  +K R   LGTK +E+IICPIY+NLPT
Sbjct: 460 TVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPT 519

Query: 675 ELQAKIFEPTPVGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSP 734
            LQAK+FEP P G RKVVLATNIAETSLTIDG+KYVIDPG+ KI SYNPRTGMESL V+P
Sbjct: 520 PLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTP 579

Query: 735 ISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIH 794
           ISKASA QRAGRSGRTGPG CFRLY       ++E  T+PEIQR NLA+VVLTLKSLGI 
Sbjct: 580 ISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQ 621

Query: 795 DLVNFDFMDQPPSEALLKALELLYALGALNKLGELTK 829
           D+ NFDFMD PP  ALLKALELLYALGAL+++GE+TK
Sbjct: 640 DVFNFDFMDPPPENALLKALELLYALGALDEIGEITK 621

The following BLAST results are available for this feature:

BLAST of MS002020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134864.1	0.0e+00	99.72	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica ...	[more]
XP_038879655.1	0.0e+00	94.15	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida] >X...	[more]
XP_008453258.1	0.0e+00	93.96	PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis me...	[more]
XP_011660328.1	0.0e+00	93.87	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus] >KGN...	[more]
KAG6587574.1	0.0e+00	93.95	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1, partial [Cucurbita ar...	[more]

BLAST of MS002020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY00	0.0e+00	76.19	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian...	[more]
F4IJV4	0.0e+00	73.81	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi...	[more]
Q767K6	8.4e-308	53.61	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 ...	[more]
F4JMJ3	1.5e-304	62.41	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 OS=Arabidopsi...	[more]
O60231	1.5e-304	53.38	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=960...	[more]

BLAST of MS002020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZI7	0.0e+00	99.72	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Momordic...	[more]
A0A1S3BVU3	0.0e+00	93.96	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Cucumis melo OX=365...	[more]
A0A0A0LUM2	0.0e+00	93.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G012660 PE=4 SV=1	[more]
A0A6J1F0A9	0.0e+00	93.95	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit...	[more]
A0A6J1KTQ9	0.0e+00	93.76	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 OS=Cucurbit...	[more]

BLAST of MS002020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32490.1	0.0e+00	76.19	RNA helicase family protein	[more]
AT1G32490.2	0.0e+00	75.43	RNA helicase family protein	[more]
AT2G35340.1	0.0e+00	73.81	helicase domain-containing protein	[more]
AT3G26560.1	7.7e-224	58.15	ATP-dependent RNA helicase, putative	[more]
AT4G16680.1	1.3e-202	60.13	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 394..414
None	No IPR available	COILS	Coil	Coil	coord: 927..947
None	No IPR available	COILS	Coil	Coil	coord: 238..265
None	No IPR available	GENE3D	1.20.120.1080		coord: 794..951 e-value: 4.3E-33 score: 115.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..229
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 121..1056
None	No IPR available	PANTHER	PTHR18934:SF208	OS05G0389800 PROTEIN	coord: 121..1056
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 595..756 e-value: 1.82177E-72 score: 235.505
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 643..748 e-value: 3.0E-17 score: 73.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 620..748 e-value: 1.5E-12 score: 47.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 614..789 score: 16.748117
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 809..901 e-value: 9.8E-38 score: 141.4
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 810..884 e-value: 4.8E-22 score: 78.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 416..600 e-value: 5.3E-34 score: 129.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 428..591 score: 19.518927
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 373..593 e-value: 8.0E-93 score: 311.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 594..769 e-value: 2.2E-70 score: 237.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 413..941
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 958..1034 e-value: 1.9E-18 score: 66.6
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 533..542

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS002020.1	MS002020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity