MS002000 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCAACCGTTAATCGATCAAAGGGAAACCGTACTGAAATTTCAAGGGCAGAACTAATACAAAAAAGCTCTTACTGCCGGGTTTCAGGTATGTACACTGGCCTTGTTAGACTACAATACTTTATGGTAGTAATATTATTCAGTCAATTGGTTTGAATAATTTGCAGGTCGAGACATGGATCTTCTTGAATTATCTGCCTATGGAAATGTACATCGTGGACAAGACTCTGGAGGGTGTAGAATTCAG GCAACCGTTAATCGATCAAAGGGAAACCGTACTGAAATTTCAAGGGCAGAACTAATACAAAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAATTATCTGCCTATGGAAATGTACATCGTGGACAAGACTCTGGAGGGTGTAGAATTCAG GCAACCGTTAATCGATCAAAGGGAAACCGTACTGAAATTTCAAGGGCAGAACTAATACAAAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAATTATCTGCCTATGGAAATGTACATCGTGGACAAGACTCTGGAGGGTGTAGAATTCAG ATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ Homology
BLAST of MS002000 vs. NCBI nr
Match: XP_008453210.1 (PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo] >KAA0057948.1 HNH endonuclease [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 9.1e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. NCBI nr
Match: XP_038880609.1 (uncharacterized protein LOC120072255 [Benincasa hispida]) HSP 1 Score: 112.8 bits (281), Expect = 9.1e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. NCBI nr
Match: XP_004138170.1 (uncharacterized protein LOC101222461 [Cucumis sativus] >KGN63676.1 hypothetical protein Csa_013308 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 9.1e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. NCBI nr
Match: KAG6587544.1 (hypothetical protein SDJN03_16109, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021519.1 hypothetical protein SDJN02_15244 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. NCBI nr
Match: XP_023529236.1 (uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. ExPASy TrEMBL
Match: A0A5A7US43 (HNH endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002510 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.4e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. ExPASy TrEMBL
Match: A0A0A0LUI5 (HNH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009800 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.4e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. ExPASy TrEMBL
Match: A0A1S3BWU4 (uncharacterized protein LOC103493997 OS=Cucumis melo OX=3656 GN=LOC103493997 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.4e-22 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. ExPASy TrEMBL
Match: A0A6J1I688 (uncharacterized protein LOC111471489 OS=Cucurbita maxima OX=3661 GN=LOC111471489 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-22 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. ExPASy TrEMBL
Match: A0A6J1C2S9 (uncharacterized protein LOC111007422 OS=Momordica charantia OX=3673 GN=LOC111007422 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of MS002000 vs. TAIR 10
Match: AT3G47490.1 (HNH endonuclease ) HSP 1 Score: 90.1 bits (222), Expect = 5.9e-19 Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of MS002000 vs. TAIR 10
Match: AT3G47490.3 (HNH endonuclease ) HSP 1 Score: 90.1 bits (222), Expect = 5.9e-19 Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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