MS001960 (gene) Bitter gourd (TR) v1

Overview


Name	MS001960
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Basic helix-loop-helix transcription factor
Location	scaffold30: 1304601 .. 1307887 (-)
RNA-Seq Expression	MS001960
Synteny	MS001960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTCCACTTGTAAATGAATCGTCCTTCTCCGCTGCGAACCCATCTGCCTACAGCTTGGCCGCGATTTGGCCTTTCGTCGGGGAGCAAGCCGGAAGTGCATTGGGGCTCCGGATGGGTAGTTTGGGTCACAATCTTGGTGGGTTTCTCGAGACTTCCACCAATCGCGACGGGTCAATGGAGGAATCGACGGTGACGGAGCAGAGTGTCGGCGGTGGGAGGAAGAGGAAGGACGTGAGCTCGGAGGACGAGTCTTCCAAAATGGTTTCCACCAGCAGTGCTAATCAATTGGTTGGTTTTAGATTTTTTTTTTTTTTTTTCTGTACTTGGTTTTATTCCTCGATCCTTTTGCTCTCAATTTGGCTACGTTGACTCAGTTTTGGTCTATTTCGGATATAAAGAAACAAAAATCACATTGGTCCAATTTGTACAGTGTGAGTTCGGTTTTCACTTTTAAAAGGTGAAATTCTTTCTCTCTTTTTGAATGGGAGGAGGTTCCAAGGAAGAGAAAACAGCTGCGAATCTTGATTACCCATTTTTATCATTGCTCTGTGCAAAGACTAACTACCAAGATAGTCCCCTAATAATAATGTATGCAGGTTTTCAAAACTTGGACGGCTGATCATATGTTTAGATGCTGTCTAACTACATTAAAGCACTTAGTCTTGCATATTTAATGAATTTACCTTATATTGACTTTGCATACCTGGTAAATTGAGGTACTGATCGCCACTTGATGTTGTACTTCTCATTTCATACAGAGTAACTCAAATGGTAAACGGATGAAAGTATTGGAATCCAGAGATGAAAATGGTGGTTTAAAAGCTGAAGTAGAACCTATCTCGGCGGATAGTAAAAAACCGATCGATCAAAGCCCGAAACCTTCTGAACCACCAAAAGATTACATCCATGTGAGAGCAAGAAGGGGCCAAGCTACTGATAGTCATAGTTTAGCAGAAAGAGTAATGCACTTTTCTCAGTTATTGGAGATTTGAATATCTCAATCATTTATCAGCCACGGTTCTTAGCATTCTGACTAACAGCTTCAAGTTTCTGGTGGAGATTTGGATTGTTCATCTGTCCATTATGCCTTCCTACTTCCTCTTAATTGCTGCCTGTTTGTCTTACTATACCCATTTGTGCAGGCAAGAAGAGAGAAGATCAGTGAGAGGATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTACTCTTTATCTGTTATTTTTTCTGCAAGCAACTGTCAAGAGAAATTGCAAAAACAACCTAAACTAGATAGAGTAGGTGCAATTTAGTTTCGAACTTTTAATTTGATCAATTTTAAAGATGAACAATTATTGGAATTTAGCTCCTGCCATTTCTACTGTTAAACACCCGAAAACTTATTGAAGGAGCTTATGTGACAAAGAGGACTTCTCTTTCTCTCCCCTTCTCTCTCAGTTTGCAGTCCCACAACAGAAAAAAAAATGATAAATTTAATAGATGTAAGATGTAGAAGTGAGAGAGTGGAGGGATTGATCAATTTTACTCCTAAACATGAAGGATAGTTGTAATATAGCCCCCACCATTATATCCAATAAGCTCTCCTTTAAATCTGTTACATCCTTCATTCTTCCTACGACCCAAACTGTGCAAGAAGAAGAGAGATTTATGGTCTGTATACCCCCCAAACTCATTTTCTCTCTTACTTCCAGTCCTTGACCAAAGCTAAAATTAAATTTAAGGATTTAGATGGAGAAAACAAAGAGAATAGGTCGGGAGTGGCTAATAAAATTAAGAGAAGTAAAAGACGAGAGCAAAGTTCTCTAACTATGAAATTACATTTATCTAACCCCAGGAAGAAGACATACTACATCGCAACAATCATTCATGTTTAAGGATCAAATTGATCAAATAGAAATCTAGAGATTAAATTGTGATTATCCTAATAGTTCAGGGTGGATTTTGCAATTTTCTTCAAGCTATTTGAATTGCGGCTACAAATGATGAGTTTGGATGCAATCATATTGAAAAATCAAGTTCAAATTATAACTTATTTTCATTGGTATCTTCCTTGCAAATGTATGCATACTTTCTACCCATTAGGTTATTGGAAAAGCACTTGTCCTCGATGAGATAATAAATTATATCCAATCATTGCAACGGCAGGTCGAGGTACTTACTCTCATTGATGTGTTCTTTTTTCTTTTTCCTTTTCGAACTTTTTCCTTATTTAATTTGAGCTTTGAATATTTTGCTCAAATTTGTAGTTCCTCTCCATGAAGCTTGAAGCTGTGAATTCCAGGATGAACATAAGCTCTGGCATTGAAGGTTTTACTGTAAAAAATGTAAGTCTGATTCTCATTTCCTTTTACGTGTCAAAATTATTTAAGCAGGCATATAAAACCACCCTCAAACCTCTAGATTTCTAAATAACTTAGGAAATAGACATAGTTGAGCCATCTGTCACAGGAATTTGGCTTGCTGTTAGTCTGATATCCTCTACGTTTAAATTTTTTCCACTAAAGGTGTTTTCTTGTCTGCATGACGGCATATGATATATTTAGTTAATTAAGGTATTAGGTGCCCGTTTCCACGAAGTAGTTTCATGTTGGTATTGCAGTAGTCTTTGTTATACTTCTGACCAACTTTGTTTGTATTGCACTAAACCATAGTCTTGGTGATGGAGAGATATGCTGTAGAAAATAGTGGAAGGGTTTCATCTCTTAGTTAAAATTGCTTCATCCAAAACCTTTCTGGTTGGATAAAAGAGTACCAGAGGTTTTAAACTGAAATCTCTTTTCCTTTTAGGACCTCCAAAACTCCTTCCTATTCCCCACATGAATGGAGGAAAAGAAAGAAGGGATTAAAGAGAGTCATGGTTGATGGTATAAATTGCTACAATAAATGGTTGCTTTAGTGAACTCTCATGCTTTCTTGCTCTTGGCACTCCATCTAATACTTGTCACTTTCCAGAAGAACTTCCATGTGGGTTAGATTTTGACATTCAAATACTATTGTTGAAACTTTGAAATGAGAAAAAGGGAGACTATTCCGAACTATTTTCGAGTATTATGTAGACTGGGCTTTCATGTATTATATGTATAAACAGACAGGAAACAAAGGAAGAAAAAACAGATTCTTATTTCCTAACTCTCTCATCTGATGTTTTCAGATTGTCAATCAACCATATGATACAGCAGGAATATTATATGGTTCACAAGCAGCAAGAGAATATACTCAAGGTGCACAACCTGAATGGTTACATATGCAGATTGGTGGAAGTTTTGAAAGAACATCT

mRNA sequence

ATGGATCCTCCACTTGTAAATGAATCGTCCTTCTCCGCTGCGAACCCATCTGCCTACAGCTTGGCCGCGATTTGGCCTTTCGTCGGGGAGCAAGCCGGAAGTGCATTGGGGCTCCGGATGGGTAGTTTGGGTCACAATCTTGGTGGGTTTCTCGAGACTTCCACCAATCGCGACGGGTCAATGGAGGAATCGACGGTGACGGAGCAGAGTGTCGGCGGTGGGAGGAAGAGGAAGGACGTGAGCTCGGAGGACGAGTCTTCCAAAATGGTTTCCACCAGCAGTGCTAATCAATTGAGTAACTCAAATGGTAAACGGATGAAAGTATTGGAATCCAGAGATGAAAATGGTGGTTTAAAAGCTGAAGTAGAACCTATCTCGGCGGATAGTAAAAAACCGATCGATCAAAGCCCGAAACCTTCTGAACCACCAAAAGATTACATCCATGTGAGAGCAAGAAGGGGCCAAGCTACTGATAGTCATAGTTTAGCAGAAAGAGCAAGAAGAGAGAAGATCAGTGAGAGGATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTTATTGGAAAAGCACTTGTCCTCGATGAGATAATAAATTATATCCAATCATTGCAACGGCAGGTCGAGTTCCTCTCCATGAAGCTTGAAGCTGTGAATTCCAGGATGAACATAAGCTCTGGCATTGAAGGTTTTACTGTAAAAAATATTGTCAATCAACCATATGATACAGCAGGAATATTATATGGTTCACAAGCAGCAAGAGAATATACTCAAGGTGCACAACCTGAATGGTTACATATGCAGATTGGTGGAAGTTTTGAAAGAACATCT

Coding sequence (CDS)

ATGGATCCTCCACTTGTAAATGAATCGTCCTTCTCCGCTGCGAACCCATCTGCCTACAGCTTGGCCGCGATTTGGCCTTTCGTCGGGGAGCAAGCCGGAAGTGCATTGGGGCTCCGGATGGGTAGTTTGGGTCACAATCTTGGTGGGTTTCTCGAGACTTCCACCAATCGCGACGGGTCAATGGAGGAATCGACGGTGACGGAGCAGAGTGTCGGCGGTGGGAGGAAGAGGAAGGACGTGAGCTCGGAGGACGAGTCTTCCAAAATGGTTTCCACCAGCAGTGCTAATCAATTGAGTAACTCAAATGGTAAACGGATGAAAGTATTGGAATCCAGAGATGAAAATGGTGGTTTAAAAGCTGAAGTAGAACCTATCTCGGCGGATAGTAAAAAACCGATCGATCAAAGCCCGAAACCTTCTGAACCACCAAAAGATTACATCCATGTGAGAGCAAGAAGGGGCCAAGCTACTGATAGTCATAGTTTAGCAGAAAGAGCAAGAAGAGAGAAGATCAGTGAGAGGATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTTATTGGAAAAGCACTTGTCCTCGATGAGATAATAAATTATATCCAATCATTGCAACGGCAGGTCGAGTTCCTCTCCATGAAGCTTGAAGCTGTGAATTCCAGGATGAACATAAGCTCTGGCATTGAAGGTTTTACTGTAAAAAATATTGTCAATCAACCATATGATACAGCAGGAATATTATATGGTTCACAAGCAGCAAGAGAATATACTCAAGGTGCACAACCTGAATGGTTACATATGCAGATTGGTGGAAGTTTTGAAAGAACATCT

Protein sequence

MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGSMEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQPYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS

Homology

[Close]

BLAST of MS001960 vs. NCBI nr
Match: XP_022135142.1 (transcription factor bHLH79 [Momordica charantia])

HSP 1 Score: 528.1 bits (1359), Expect = 4.6e-146
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA
Sbjct: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS
Sbjct: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 278

[Close]

BLAST of MS001960 vs. NCBI nr
Match: XP_038878327.1 (transcription factor bHLH79 [Benincasa hispida])

HSP 1 Score: 469.5 bits (1207), Expect = 1.9e-128
Identity = 252/278 (90.65%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLA+IWPF GEQ GSALGLRM +L  NL GF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLASIWPFGGEQGGSALGLRMANLVQNLSGFSESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNS GKRMKV+ESRDEN G+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSKGKRMKVVESRDENDGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EVEP SAD KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVEPSSADGKKMAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNIS G+EGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISPGLEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQPEWLHMQIGGSFERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQPEWLHMQIGGSFERTS 276

[Close]

BLAST of MS001960 vs. NCBI nr
Match: XP_008453158.1 (PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0057911.1 transcription factor bHLH79 [Cucumis melo var. makuwa] >TYJ98599.1 transcription factor bHLH79 [Cucumis melo var. makuwa])

HSP 1 Score: 469.2 bits (1206), Expect = 2.5e-128
Identity = 251/278 (90.29%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLA+IWPF GEQ GS LGLRM +L  NLGGF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLASIWPFGGEQGGSVLGLRMANLAQNLGGFRESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNSN KRMKV+ESRDENGG+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EV+P SAD KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVDPNSADGKKLAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM+IS GIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMSISPGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQPEWLHMQIGG FERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQPEWLHMQIGGGFERTS 276

[Close]

BLAST of MS001960 vs. NCBI nr
Match: XP_004138140.1 (transcription factor bHLH79 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-126
Identity = 247/278 (88.85%), Postives = 259/278 (93.17%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPS+YSLA+IWPF G+Q GS LGLRM +L  NLGGF E STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSSYSLASIWPFGGDQGGSVLGLRMANLAQNLGGFRECSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNSN KRMKV+ESRDENGG+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EV+P S+D KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVDPNSSDGKKLAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNI+ GIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQ EWLHMQIGG FERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQTEWLHMQIGGGFERTS 276

[Close]

BLAST of MS001960 vs. NCBI nr
Match: XP_022932808.1 (transcription factor bHLH79-like [Cucurbita moschata])

HSP 1 Score: 461.8 bits (1187), Expect = 4.1e-126
Identity = 248/279 (88.89%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLAAIWPF GEQ GS LGLRM +LG  LGGF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLAAIWPFGGEQGGSTLGLRMANLGQILGGFPESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQL+NS GKRMKV+ESRDENG +KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLNNSKGKRMKVVESRDENGDIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EVE  S D KK  +QSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK+LQD
Sbjct: 121 EVESSSGDGKKAAEQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKMLQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE VNSRMNIS GIEGFT KNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRMNISPGIEGFTAKNIVNQ 240

Query: 241 PYD-TAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD  AGILYGSQ AREY+QGAQPEWLHMQIGGSFERTS
Sbjct: 241 PYDAAAGILYGSQTAREYSQGAQPEWLHMQIGGSFERTS 278

[Close]

BLAST of MS001960 vs. ExPASy Swiss-Prot
Match: Q9LV17 (Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-67
Identity = 161/284 (56.69%), Postives = 199/284 (70.07%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRD-G 60
           MDPPLVN+SSFSAANPS+Y+L+ IWPF    A  + GLR+      +    E S N+D  
Sbjct: 1   MDPPLVNDSSFSAANPSSYTLSEIWPFPVNDAVRS-GLRLAVNSGRVFTRSEHSGNKDVS 60

Query: 61  SMEESTVTEQSVG-GGRKRKDVSSEDESSKMVSTSSA-NQLSNSNGKRMKVL--ESRDEN 120
           + EESTVT+ + G G RK +D++SED+SSKMVS+SS+ N+L  S  K+ K+   ES + +
Sbjct: 61  AAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKESGDKKRKLCGSESGNGD 120

Query: 121 GGLKAEVEPIS-ADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 180
           G ++ E E  S     K  +Q  KP EPPKDYIHVRARRGQATD HSLAERARREKISE+
Sbjct: 121 GSMRPEGETSSGGGGSKATEQKNKP-EPPKDYIHVRARRGQATDRHSLAERARREKISEK 180

Query: 181 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTV 240
           M  LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS  +    I  F  
Sbjct: 181 MTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPS 240

Query: 241 KNIVNQPYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
            ++   P D    +Y  Q A E T+ +QPEWLHMQ+ G+F RT+
Sbjct: 241 GDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281

[Close]

BLAST of MS001960 vs. ExPASy Swiss-Prot
Match: Q84T08 (Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-59
Identity = 143/251 (56.97%), Postives = 172/251 (68.53%), Query Frame = 0


Query: 40  MGSLGHNLGGFLETSTNRDGSMEESTVTEQSVGGG-----RKRKDVSSEDESSKMVSTS- 99
           +G  G   GG         G  E+S  +    GGG     R+R+  + ED+SS++VSTS 
Sbjct: 17  LGGGGGGGGGGRGLEAAASGVTEQSNGSRGGGGGGGAGRRRQREAPALEDDSSRIVSTSG 76

Query: 100 ---SANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKPIDQSPKPSEPPK-DYIHV 159
                  L++S  KR K  +S  +N  L+ E E  S ++ K  DQ+P P EPPK DYIHV
Sbjct: 77  GGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHV 136

Query: 160 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 219
           RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQ+LQRQV
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQV 196

Query: 220 EFLSMKLEAVNSRMNISSGIEGFTVKNIVNQPYDTA-GILYGSQAAREYTQGAQP-EWLH 279
           EFLSMKLEAVN+ +N  +GIE F  K+   Q Y+TA G+ +  Q  REY QG+ P EWLH
Sbjct: 197 EFLSMKLEAVNAHVN--NGIEAFPPKDFGAQVYNTAPGLTFDPQTPREYAQGSTPSEWLH 256

[Close]

BLAST of MS001960 vs. ExPASy Swiss-Prot
Match: Q69WS3 (Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094 PE=1 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 2.1e-56
Identity = 139/234 (59.40%), Postives = 162/234 (69.23%), Query Frame = 0


Query: 64  STVTEQ---SVGGG-----RKRKDVSSEDES-SKMVSTSSANQLSNSNG--------KRM 123
           S VT+Q   S GGG     R R D   ED+  SK+VSTS+A+      G        KR+
Sbjct: 25  SVVTDQGSGSRGGGGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGGGQDSDAPEAKRL 84

Query: 124 KVLESRDENGGLKAEVEPISADSKKPIDQSPKPSEPPK-DYIHVRARRGQATDSHSLAER 183
           K ++S D+N  L+ E    S +S K  D++  P EPPK DYIHVRARRGQATDSHSLAER
Sbjct: 85  KPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAER 144

Query: 184 ARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNI 243
           ARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEFLSMKLEAVNS M  
Sbjct: 145 ARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLSMKLEAVNSHM-- 204

Query: 244 SSGIEGFTVKNIVNQPYDT-AGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
            +GI  F  K+   QPY+T AG+ +  Q  RE+ QG+  EWLHMQIG ++ER +
Sbjct: 205 INGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQGSTSEWLHMQIGNAYERVT 256

[Close]

BLAST of MS001960 vs. ExPASy Swiss-Prot
Match: Q0JXE7 (Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-42
Identity = 122/226 (53.98%), Postives = 148/226 (65.49%), Query Frame = 0


Query: 19  YSLAAIWPF-VGEQAGSALGLRMGSLGHNLGGFLETSTNRDG-----SMEESTVTEQSVG 78
           ++LA IW F +   + +    R   +G N  G  + +T  +G     S   S    + + 
Sbjct: 13  FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72

Query: 79  GGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKP 138
           G  KR++   E +S+K+VST  A++  N   KR K+    DE    KAE E +  ++   
Sbjct: 73  GAWKRRE--DESKSAKIVSTIGASEGEN---KRQKI----DEVCDGKAEAESLGTET--- 132

Query: 139 IDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 198
            +Q  +  EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 133 -EQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 192

Query: 199 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIV 239
           LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN   GIE F  K ++
Sbjct: 193 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEVM 223

[Close]

BLAST of MS001960 vs. ExPASy Swiss-Prot
Match: Q9LK48 (Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.6e-35
Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = 0


Query: 55  TNRDGSMEESTVTEQ---SVGGGRKRKDVSS----EDESSKMVSTSSANQLSNSNGKRMK 114
           +N+   ++  +V+++   +    RKRK + S    E  +S  ++ S++     + G +  
Sbjct: 92  SNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGG 151

Query: 115 VLESRDENGGLKAEVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERAR 174
               +D  G  K  VE    DSK       KP E PKDYIHVRARRGQATDSHSLAERAR
Sbjct: 152 KRSKQDVAGSSKNGVE--KCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERAR 211

Query: 175 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISS 228
           REKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL  VN RM  ++
Sbjct: 212 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNA 269

[Close]

BLAST of MS001960 vs. ExPASy TrEMBL
Match: A0A6J1C1U3 (transcription factor bHLH79 OS=Momordica charantia OX=3673 GN=LOC111007184 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.2e-146
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA
Sbjct: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS
Sbjct: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 278

[Close]

BLAST of MS001960 vs. ExPASy TrEMBL
Match: A0A5A7UWP9 (Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002200 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.2e-128
Identity = 251/278 (90.29%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLA+IWPF GEQ GS LGLRM +L  NLGGF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLASIWPFGGEQGGSVLGLRMANLAQNLGGFRESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNSN KRMKV+ESRDENGG+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EV+P SAD KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVDPNSADGKKLAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM+IS GIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMSISPGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQPEWLHMQIGG FERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQPEWLHMQIGGGFERTS 276

[Close]

BLAST of MS001960 vs. ExPASy TrEMBL
Match: A0A1S3BUZ6 (transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103493956 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.2e-128
Identity = 251/278 (90.29%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLA+IWPF GEQ GS LGLRM +L  NLGGF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLASIWPFGGEQGGSVLGLRMANLAQNLGGFRESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNSN KRMKV+ESRDENGG+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EV+P SAD KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVDPNSADGKKLAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM+IS GIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMSISPGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQPEWLHMQIGG FERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQPEWLHMQIGGGFERTS 276

[Close]

BLAST of MS001960 vs. ExPASy TrEMBL
Match: A0A0A0LS74 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G007910 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.2e-126
Identity = 247/278 (88.85%), Postives = 259/278 (93.17%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPS+YSLA+IWPF G+Q GS LGLRM +L  NLGGF E STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSSYSLASIWPFGGDQGGSVLGLRMANLAQNLGGFRECSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQLSNSN KRMKV+ESRDENGG+KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EV+P S+D KK  +QSPKP EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD
Sbjct: 121 EVDPNSSDGKKLAEQSPKP-EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNI+ GIEGFTVKNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNITPGIEGFTVKNIVNQ 240

Query: 241 PYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD AGILYGSQAAR+YTQGAQ EWLHMQIGG FERTS
Sbjct: 241 PYDAAGILYGSQAARDYTQGAQTEWLHMQIGGGFERTS 276

[Close]

BLAST of MS001960 vs. ExPASy TrEMBL
Match: A0A6J1F2S8 (transcription factor bHLH79-like OS=Cucurbita moschata OX=3662 GN=LOC111439266 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.0e-126
Identity = 248/279 (88.89%), Postives = 257/279 (92.11%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRDGS 60
           MDPPLVNESSFSAANPSAYSLAAIWPF GEQ GS LGLRM +LG  LGGF E+STNRDGS
Sbjct: 1   MDPPLVNESSFSAANPSAYSLAAIWPFGGEQGGSTLGLRMANLGQILGGFPESSTNRDGS 60

Query: 61  MEESTVTEQSVGGGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKA 120
           MEESTVTEQS GGGRKRKDVSSEDESS+MVSTSSANQL+NS GKRMKV+ESRDENG +KA
Sbjct: 61  MEESTVTEQS-GGGRKRKDVSSEDESSRMVSTSSANQLNNSKGKRMKVVESRDENGDIKA 120

Query: 121 EVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQD 180
           EVE  S D KK  +QSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMK+LQD
Sbjct: 121 EVESSSGDGKKAAEQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKMLQD 180

Query: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQ 240
           LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE VNSRMNIS GIEGFT KNIVNQ
Sbjct: 181 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLETVNSRMNISPGIEGFTAKNIVNQ 240

Query: 241 PYD-TAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
           PYD  AGILYGSQ AREY+QGAQPEWLHMQIGGSFERTS
Sbjct: 241 PYDAAAGILYGSQTAREYSQGAQPEWLHMQIGGSFERTS 278

[Close]

BLAST of MS001960 vs. TAIR 10
Match: AT5G62610.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.4e-68
Identity = 161/284 (56.69%), Postives = 199/284 (70.07%), Query Frame = 0


Query: 1   MDPPLVNESSFSAANPSAYSLAAIWPFVGEQAGSALGLRMGSLGHNLGGFLETSTNRD-G 60
           MDPPLVN+SSFSAANPS+Y+L+ IWPF    A  + GLR+      +    E S N+D  
Sbjct: 1   MDPPLVNDSSFSAANPSSYTLSEIWPFPVNDAVRS-GLRLAVNSGRVFTRSEHSGNKDVS 60

Query: 61  SMEESTVTEQSVG-GGRKRKDVSSEDESSKMVSTSSA-NQLSNSNGKRMKVL--ESRDEN 120
           + EESTVT+ + G G RK +D++SED+SSKMVS+SS+ N+L  S  K+ K+   ES + +
Sbjct: 61  AAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKESGDKKRKLCGSESGNGD 120

Query: 121 GGLKAEVEPIS-ADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISER 180
           G ++ E E  S     K  +Q  KP EPPKDYIHVRARRGQATD HSLAERARREKISE+
Sbjct: 121 GSMRPEGETSSGGGGSKATEQKNKP-EPPKDYIHVRARRGQATDRHSLAERARREKISEK 180

Query: 181 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTV 240
           M  LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS  +    I  F  
Sbjct: 181 MTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPS 240

Query: 241 KNIVNQPYDTAGILYGSQAAREYTQGAQPEWLHMQIGGSFERTS 279
            ++   P D    +Y  Q A E T+ +QPEWLHMQ+ G+F RT+
Sbjct: 241 GDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281

[Close]

BLAST of MS001960 vs. TAIR 10
Match: AT1G59640.1 (BIG PETAL P )

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-58
Identity = 147/267 (55.06%), Postives = 177/267 (66.29%), Query Frame = 0


Query: 19  YSLAAIWPF-VGEQAGSALGLRMGSLGHNLGGFLETSTNRDG-----SMEESTVTEQSVG 78
           ++LA IW F +   + +    R   +G N  G  + +T  +G     S   S    + + 
Sbjct: 13  FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72

Query: 79  GGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKP 138
           G  KR++   E +S+K+VST  A++  N   KR K+    DE    KAE E +  ++   
Sbjct: 73  GAWKRRE--DESKSAKIVSTIGASEGEN---KRQKI----DEVCDGKAEAESLGTET--- 132

Query: 139 IDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 198
            +Q  +  EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 133 -EQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 192

Query: 199 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIVNQPYDTAGILYGSQ 258
           LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN   GIE F  K    Q ++   I +GSQ
Sbjct: 193 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEFGQQAFENPEIQFGSQ 252

Query: 259 AAREYTQGAQPEWLHMQIG-GSFERTS 279
           + REY++GA PEWLHMQIG G FERTS
Sbjct: 253 STREYSRGASPEWLHMQIGSGGFERTS 264

[Close]

BLAST of MS001960 vs. TAIR 10
Match: AT1G59640.2 (BIG PETAL P )

HSP 1 Score: 174.9 bits (442), Expect = 9.2e-44
Identity = 122/226 (53.98%), Postives = 148/226 (65.49%), Query Frame = 0


Query: 19  YSLAAIWPF-VGEQAGSALGLRMGSLGHNLGGFLETSTNRDG-----SMEESTVTEQSVG 78
           ++LA IW F +   + +    R   +G N  G  + +T  +G     S   S    + + 
Sbjct: 13  FNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGIS 72

Query: 79  GGRKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKP 138
           G  KR++   E +S+K+VST  A++  N   KR K+    DE    KAE E +  ++   
Sbjct: 73  GAWKRRE--DESKSAKIVSTIGASEGEN---KRQKI----DEVCDGKAEAESLGTET--- 132

Query: 139 IDQSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 198
            +Q  +  EP KDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 133 -EQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA 192

Query: 199 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISSGIEGFTVKNIV 239
           LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN   GIE F  K ++
Sbjct: 193 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEVM 223

[Close]

BLAST of MS001960 vs. TAIR 10
Match: AT3G23690.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 5.4e-36
Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = 0


Query: 55  TNRDGSMEESTVTEQ---SVGGGRKRKDVSS----EDESSKMVSTSSANQLSNSNGKRMK 114
           +N+   ++  +V+++   +    RKRK + S    E  +S  ++ S++     + G +  
Sbjct: 92  SNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGG 151

Query: 115 VLESRDENGGLKAEVEPISADSKKPIDQSPKPSEPPKDYIHVRARRGQATDSHSLAERAR 174
               +D  G  K  VE    DSK       KP E PKDYIHVRARRGQATDSHSLAERAR
Sbjct: 152 KRSKQDVAGSSKNGVE--KCDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERAR 211

Query: 175 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISS 228
           REKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL  VN RM  ++
Sbjct: 212 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNA 269

[Close]

BLAST of MS001960 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35
Identity = 90/152 (59.21%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 75  RKRKDVSSEDESSKMVSTSSANQLSNSNGKRMKVLESRDENGGLKAEVEPISADSKKPID 134
           RKRK  S ++  S + S+    +  +S+ KR K     +ENG           D  K ID
Sbjct: 205 RKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCK---KSEENG-----------DKTKSID 264

Query: 135 QSPKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 194
                  P KDYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+
Sbjct: 265 -------PYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 324

Query: 195 LDEIINYIQSLQRQVEFLSMKLEAVNSRMNIS 227
           LDEIINY+QSLQRQVEFLSMKL +VN+R++ +
Sbjct: 325 LDEIINYVQSLQRQVEFLSMKLSSVNTRLDFN 335

The following BLAST results are available for this feature:

BLAST of MS001960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135142.1	4.6e-146	100.00	transcription factor bHLH79 [Momordica charantia]	[more]
XP_038878327.1	1.9e-128	90.65	transcription factor bHLH79 [Benincasa hispida]	[more]
XP_008453158.1	2.5e-128	90.29	PREDICTED: transcription factor bHLH79 [Cucumis melo] >KAA0057911.1 transcriptio...	[more]
XP_004138140.1	2.4e-126	88.85	transcription factor bHLH79 [Cucumis sativus]	[more]
XP_022932808.1	4.1e-126	88.89	transcription factor bHLH79-like [Cucurbita moschata]	[more]

BLAST of MS001960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV17	2.0e-67	56.69	Transcription factor bHLH79 OS=Arabidopsis thaliana OX=3702 GN=BHLH79 PE=1 SV=1	[more]
Q84T08	3.4e-59	56.97	Transcription factor BHLH089 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH089...	[more]
Q69WS3	2.1e-56	59.40	Transcription factor BHLH094 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH094...	[more]
Q0JXE7	1.3e-42	53.98	Transcription factor BPE OS=Arabidopsis thaliana OX=3702 GN=BPE PE=2 SV=1	[more]
Q9LK48	7.6e-35	51.11	Transcription factor bHLH77 OS=Arabidopsis thaliana OX=3702 GN=BHLH77 PE=1 SV=1	[more]

BLAST of MS001960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1U3	2.2e-146	100.00	transcription factor bHLH79 OS=Momordica charantia OX=3673 GN=LOC111007184 PE=4 ...	[more]
A0A5A7UWP9	1.2e-128	90.29	Transcription factor bHLH79 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BUZ6	1.2e-128	90.29	transcription factor bHLH79 OS=Cucumis melo OX=3656 GN=LOC103493956 PE=4 SV=1	[more]
A0A0A0LS74	1.2e-126	88.85	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G007910 PE=4 S...	[more]
A0A6J1F2S8	2.0e-126	88.89	transcription factor bHLH79-like OS=Cucurbita moschata OX=3662 GN=LOC111439266 P...	[more]

BLAST of MS001960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62610.1	1.4e-68	56.69	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G59640.1	3.0e-58	55.06	BIG PETAL P	[more]
AT1G59640.2	9.2e-44	53.98	BIG PETAL P	[more]
AT3G23690.1	5.4e-36	51.11	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G07340.1	2.7e-35	59.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	COILS	Coil	Coil	coord: 274..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..145
None	No IPR available	PANTHER	PTHR12565:SF384	MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..277
None	No IPR available	CDD	cd18919	bHLH_AtBPE_like	coord: 145..227 e-value: 2.37138E-60 score: 184.183
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 161..211 e-value: 1.0E-10 score: 51.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 159..206 e-value: 2.2E-8 score: 34.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 155..205 score: 15.827638
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 152..227 e-value: 4.0E-16 score: 60.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 153..224
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 1..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001960.1	MS001960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0046983	protein dimerization activity