
MS001940 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTTGGAGGAGCAGCTGCTTCTGCTACTGTTACGGCATCCAAATTTGCAGGAAGATTTAGCAGTAATCCATTTCTTCTATCAACTAATCACCTTCCCAAGCTCCGCCTCCATCGCACTCCCTTCTCCGCATTTCCGACCAATCCACCTGGTGCGATTCATTCCCTTTCCCTATATTCTTGTGACGTAGAACTTGCTTGAATTGCTTTGCTTGGGTCTTTTGAATGTTGATATCAGATATGCTCGCTTTTTGCTGATTGACACTTGGTTTTACATCTATTGGAGAATATAATTAATGGGTTTAAGCCTTTGAAGAGGGTATTTTGAAAAAAAATGTCGCACCATTCTCACCTCTCCCTGAAGATTGATGATCGATACAGGATTGAAATACCAAATTTGCGCTGTAAGTGGAGCCGCAATAGATCCTGTTTCTTCAAATAAAGAGAATGGAGAACGGTCACCTGAAACTTGGAAGATCAAAATGCTCTATGATGGAGACTGCCCACTCTGTATGCGGGAGGTTGTCCCAAAATATCTTCTTCGCATTTAGATTTAACCTATTGAAATTGTTCTTTGATCGTATAGTAGAATCTTGCTTTTCAAGTCGTTTTTTCTATATGTCTTTACTTGTATGTAATTCTTTGTGAATTCGCTGTACTGTCAGGTTAATATGCTGAGAGAGAGGAACAGGCGATATGGCACAATCAAGTTTGTTGACATAAGTTCAGATGATTACACTCCTGAAGGAAATCAGGGCCTCGACTACAAAACTGTATGATGTTTGACTATTTCTGTTTTCTGAATGATTGAATACTAAGTCAATTATCTGAATTTTGAAAGTTACCGGATTTTGAATGATATTAACTCCATGAACTACAGGACCATAACATCGTTGTTCTTTGACTAAAAGGAAAACAAACAACTACCAGTTACTTTCCAGTTAATGTTGAGTCAAGAGTGTATTTCCTTGGACAAATTTTTTTCTTGACCTCTAAGGAACAGTTATGAAGTTTCGCACATTTGGTTGTCATTCAGGTTATGGGAAGAATCCATGCAATCCTTGCAGATGGTACTGTGGTCAGAGATGTTGAAGTATGCTCTTTTATTCTGCTTCTGTTTTAATTTAAAATCAGCAGTAAAATGATTATTATATCATGGTTTTCAGTTTTCTGTTGGGTGGTCACTTGATGTTCAAGTCGATTATTCTTAGCAATCCAACTTTTCCCTGTCATGCTAAGTTTGAATTTGACTTTTATCAGCCTCAGCCTCCTTATTCCTCAACTTTTGATCATTTAGTACTTCTCTTGCTGAAATATTAATGTTTGACACATATTTTCTCAAAAGATTAATCTGTCTTATGCCAACTACTTCTTCTACAGGCCTTTAGAAGGCTTTATGAACAAGTTGGTCTTGGATGGGTTTATGCTGTTACAAAATATGAACCAGTAGGTCTTCTCGAGTTCATTTGGCTTTCATCTTCTGTTCTCCCTGAAGCAATTTTAATCACACGAACTCTGATTTCTTAATGCCTTCACATTGTTGCTAATGAACAGCTTATTGTTCCCAGGTTGCAACACTAGCTGATGCCATATATGGTGTCTGGGCAAAATATCGTCTTCAGCTGACAGGT ATGGCGTTTGGAGGAGCAGCTGCTTCTGCTACTGTTACGGCATCCAAATTTGCAGGAAGATTTAGCAGTAATCCATTTCTTCTATCAACTAATCACCTTCCCAAGCTCCGCCTCCATCGCACTCCCTTCTCCGCATTTCCGACCAATCCACCTGGATTGAAATACCAAATTTGCGCTGTAAGTGGAGCCGCAATAGATCCTGTTTCTTCAAATAAAGAGAATGGAGAACGGTCACCTGAAACTTGGAAGATCAAAATGCTCTATGATGGAGACTGCCCACTCTGTATGCGGGAGGTTGTTAATATGCTGAGAGAGAGGAACAGGCGATATGGCACAATCAAGTTTGTTGACATAAGTTCAGATGATTACACTCCTGAAGGAAATCAGGGCCTCGACTACAAAACTGTTATGGGAAGAATCCATGCAATCCTTGCAGATGGTACTGTGGTCAGAGATGTTGAAGCCTTTAGAAGGCTTTATGAACAAGTTGGTCTTGGATGGGTTTATGCTGTTACAAAATATGAACCAGTTGCAACACTAGCTGATGCCATATATGGTGTCTGGGCAAAATATCGTCTTCAGCTGACAGGT ATGGCGTTTGGAGGAGCAGCTGCTTCTGCTACTGTTACGGCATCCAAATTTGCAGGAAGATTTAGCAGTAATCCATTTCTTCTATCAACTAATCACCTTCCCAAGCTCCGCCTCCATCGCACTCCCTTCTCCGCATTTCCGACCAATCCACCTGGATTGAAATACCAAATTTGCGCTGTAAGTGGAGCCGCAATAGATCCTGTTTCTTCAAATAAAGAGAATGGAGAACGGTCACCTGAAACTTGGAAGATCAAAATGCTCTATGATGGAGACTGCCCACTCTGTATGCGGGAGGTTGTTAATATGCTGAGAGAGAGGAACAGGCGATATGGCACAATCAAGTTTGTTGACATAAGTTCAGATGATTACACTCCTGAAGGAAATCAGGGCCTCGACTACAAAACTGTTATGGGAAGAATCCATGCAATCCTTGCAGATGGTACTGTGGTCAGAGATGTTGAAGCCTTTAGAAGGCTTTATGAACAAGTTGGTCTTGGATGGGTTTATGCTGTTACAAAATATGAACCAGTTGCAACACTAGCTGATGCCATATATGGTGTCTGGGCAAAATATCGTCTTCAGCTGACAGGT MAFGGAAASATVTASKFAGRFSSNPFLLSTNHLPKLRLHRTPFSAFPTNPPGLKYQICAVSGAAIDPVSSNKENGERSPETWKIKMLYDGDCPLCMREVVNMLRERNRRYGTIKFVDISSDDYTPEGNQGLDYKTVMGRIHAILADGTVVRDVEAFRRLYEQVGLGWVYAVTKYEPVATLADAIYGVWAKYRLQLTG Homology
BLAST of MS001940 vs. NCBI nr
Match: XP_022135551.1 (uncharacterized protein At5g50100, mitochondrial [Momordica charantia]) HSP 1 Score: 398.3 bits (1022), Expect = 3.9e-107 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of MS001940 vs. NCBI nr
Match: XP_022972940.1 (uncharacterized protein At5g50100, chloroplastic [Cucurbita maxima]) HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86 Identity = 168/204 (82.35%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of MS001940 vs. NCBI nr
Match: XP_023530421.1 (uncharacterized protein At5g50100, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86 Identity = 167/204 (81.86%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of MS001940 vs. NCBI nr
Match: KAG6587489.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86 Identity = 167/204 (81.86%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of MS001940 vs. NCBI nr
Match: KAG7021476.1 (putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327.4 bits (838), Expect = 8.5e-86 Identity = 166/204 (81.37%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of MS001940 vs. ExPASy Swiss-Prot
Match: Q8W485 (Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g50100 PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 5.9e-58 Identity = 119/198 (60.10%), Postives = 139/198 (70.20%), Query Frame = 0
BLAST of MS001940 vs. ExPASy TrEMBL
Match: A0A6J1C129 (uncharacterized protein At5g50100, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007478 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 1.9e-107 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of MS001940 vs. ExPASy TrEMBL
Match: A0A6J1IA19 (uncharacterized protein At5g50100, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471442 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 8.3e-87 Identity = 168/204 (82.35%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of MS001940 vs. ExPASy TrEMBL
Match: A0A6J1ED50 (uncharacterized protein At5g50100, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111432094 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.3e-86 Identity = 166/204 (81.37%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of MS001940 vs. ExPASy TrEMBL
Match: A0A5A7URW2 (Thiol-disulfide oxidoreductase DCC isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001900 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 9.1e-78 Identity = 155/199 (77.89%), Postives = 169/199 (84.92%), Query Frame = 0
BLAST of MS001940 vs. ExPASy TrEMBL
Match: A0A1S3BWL4 (uncharacterized protein At5g50100, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493933 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 7.7e-77 Identity = 153/199 (76.88%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of MS001940 vs. TAIR 10
Match: AT5G50100.1 (Putative thiol-disulphide oxidoreductase DCC ) HSP 1 Score: 225.3 bits (573), Expect = 4.2e-59 Identity = 119/198 (60.10%), Postives = 139/198 (70.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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