MS001891 (gene) Bitter gourd (TR) v1

Overview


Name	MS001891
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LOB domain-containing protein
Location	scaffold30: 743994 .. 744533 (+)
RNA-Seq Expression	MS001891
Synteny	MS001891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGTCAAGTTCATACAATTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCCGGTTGCATCTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAAATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAACGAGCTTCTGCCTCACCAAAGAGAGGATGCAGTCAACTCCCTTGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCGTTCCTCCAAAGGCAAGTCCAAAGGCTCCAAAAGGAACTTGACGCTGCGAATGCCGACCTAATTCGGTACGCATGCAACGAGATACCTAGTGCAGGGGTCGGTCATGTGGTTCAGTCAATCCCCGGCCCTCGCCCGAGAAGCTACGAAGGGGCATCGAGCGGGTATTATAATCAACAGCTTTCTGCTTTCCCCATGGCTTATCCACTGCCTTGGAATGAAAGCTCTTCTGGAAATAACATGAATGAAGGAGGAGGAGGGGATGGCAGTATT

mRNA sequence

ATGGCATCGTCAAGTTCATACAATTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCCGGTTGCATCTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAAATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAACGAGCTTCTGCCTCACCAAAGAGAGGATGCAGTCAACTCCCTTGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCGTTCCTCCAAAGGCAAGTCCAAAGGCTCCAAAAGGAACTTGACGCTGCGAATGCCGACCTAATTCGGTACGCATGCAACGAGATACCTAGTGCAGGGGTCGGTCATGTGGTTCAGTCAATCCCCGGCCCTCGCCCGAGAAGCTACGAAGGGGCATCGAGCGGGTATTATAATCAACAGCTTTCTGCTTTCCCCATGGCTTATCCACTGCCTTGGAATGAAAGCTCTTCTGGAAATAACATGAATGAAGGAGGAGGAGGGGATGGCAGTATT

Coding sequence (CDS)

ATGGCATCGTCAAGTTCATACAATTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCCGGTTGCATCTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAAATCTTTGGGGCAAGCAATGTGACAAAGCTGCTCAACGAGCTTCTGCCTCACCAAAGAGAGGATGCAGTCAACTCCCTTGCCTACGAGGCCGAGGCCCGAGTCCGAGACCCCGTCTACGGCTGCGTCGGGGCCATCTCGTTCCTCCAAAGGCAAGTCCAAAGGCTCCAAAAGGAACTTGACGCTGCGAATGCCGACCTAATTCGGTACGCATGCAACGAGATACCTAGTGCAGGGGTCGGTCATGTGGTTCAGTCAATCCCCGGCCCTCGCCCGAGAAGCTACGAAGGGGCATCGAGCGGGTATTATAATCAACAGCTTTCTGCTTTCCCCATGGCTTATCCACTGCCTTGGAATGAAAGCTCTTCTGGAAATAACATGAATGAAGGAGGAGGAGGGGATGGCAGTATT

Protein sequence

MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSAGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI

Homology

[Close]

BLAST of MS001891 vs. NCBI nr
Match: XP_022135327.1 (protein LATERAL ORGAN BOUNDARIES-like [Momordica charantia])

HSP 1 Score: 370.5 bits (950), Expect = 8.0e-99
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVH+IFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHRIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120

Query: 121 AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI 180
           AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI
Sbjct: 121 AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI 180

[Close]

BLAST of MS001891 vs. NCBI nr
Match: KAG6589428.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 30  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 89

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 90  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 149

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 150 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 209

[Close]

BLAST of MS001891 vs. NCBI nr
Match: XP_023515750.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQYHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 180

[Close]

BLAST of MS001891 vs. NCBI nr
Match: XP_022922076.1 (LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922077.1 LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922078.1 LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >KAG7023106.1 Protein LATERAL ORGAN BOUNDARIES [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 180

[Close]

BLAST of MS001891 vs. NCBI nr
Match: XP_022922073.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 59  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 118

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 119 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 178

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 179 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 238

[Close]

BLAST of MS001891 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-58
Identity = 121/175 (69.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +   + 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 177
             G+VV  +  P+P           +QQL      Y L    S   N M  G GG
Sbjct: 123 APGNVVDLVFQPQPLP---------SQQLPPLNPVYRLS-GASPVMNQMPRGTGG 167

[Close]

BLAST of MS001891 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-47
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQ+EL+  NADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of MS001891 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 94/172 (54.65%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 3   SSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62
           +SSS NSPCAACKFLRRKC P C+FAPYFPP++PQKFANVHK+FGASNVTKLLNEL P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSAG 122
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L  A ++L +Y    I +A 
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAAT 121

Query: 123 VGHV-VQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEG 174
              + +  + G    +       Y++ Q   FP        +  +GNN + G
Sbjct: 122 HQSLGINLLAGAADGTATAVRDHYHHHQF--FPREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of MS001891 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40
Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 9   SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
           SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P QREDAVN
Sbjct: 32  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91

Query: 69  SLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 122
           SLAYEA+ R+RDPVYGCVG IS LQ  +++LQ++L  A  +L +Y      SA
Sbjct: 92  SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASA 144

[Close]

BLAST of MS001891 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 75/105 (71.43%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 9   SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
           SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P+QREDAVN
Sbjct: 37  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVN 96

Query: 69  SLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRY 114
           SLAYEA+ R+RDPVYGCV  IS LQR +++LQ++L  A  +L +Y
Sbjct: 97  SLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of MS001891 vs. ExPASy TrEMBL
Match: A0A6J1C2E0 (protein LATERAL ORGAN BOUNDARIES-like OS=Momordica charantia OX=3673 GN=LOC111007317 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 3.9e-99
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVH+IFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHRIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120

Query: 121 AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI 180
           AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI
Sbjct: 121 AGVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGGDGSI 180

[Close]

BLAST of MS001891 vs. ExPASy TrEMBL
Match: A0A6J1E272 (LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.1e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 180

[Close]

BLAST of MS001891 vs. ExPASy TrEMBL
Match: A0A6J1E5J8 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.1e-85
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 59  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 118

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 119 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 178

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYYNQ L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 179 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAFPMAYPLPWNENSPGNDINE-GGG 238

[Close]

BLAST of MS001891 vs. ExPASy TrEMBL
Match: A0A6J1JDL4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111485830 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 159/184 (86.41%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 AGVGHVVQSIPGPRPRS----YEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 180
           AGV HVVQ  PG RPR+    +  +S+GYY+Q L AFPMAYPLPWNE+S GN++NE GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQYHTSSSTGYYSQHLPAFPMAYPLPWNENSPGNDINE-GGG 180

[Close]

BLAST of MS001891 vs. ExPASy TrEMBL
Match: A0A6J1F030 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438177 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 153/187 (81.82%), Postives = 159/187 (85.03%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPS 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQ+ RLQKELDAAN DLIRYACNEIP 
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227

Query: 121 AGVGHVVQSIPGPRPRSY----------EGASSGYYNQQLSAFPMAYPLPWNESSSGNNM 178
            G  HVVQ IP  RPR+           EG+SSGYYNQ   AFPM YPLPWNE+SSGNN+
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAFPMGYPLPWNENSSGNNI 287

[Close]

BLAST of MS001891 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 121/175 (69.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +   + 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 177
             G+VV  +  P+P           +QQL      Y L    S   N M  G GG
Sbjct: 123 APGNVVDLVFQPQPLP---------SQQLPPLNPVYRLS-GASPVMNQMPRGTGG 167

[Close]

BLAST of MS001891 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 121/175 (69.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +   + 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 177
             G+VV  +  P+P           +QQL      Y L    S   N M  G GG
Sbjct: 123 APGNVVDLVFQPQPLP---------SQQLPPLNPVYRLS-GASPVMNQMPRGTGG 167

[Close]

BLAST of MS001891 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 121/175 (69.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +   + 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 177
             G+VV  +  P+P           +QQL      Y L    S   N M  G GG
Sbjct: 123 APGNVVDLVFQPQPLP---------SQQLPPLNPVYRLS-GASPVMNQMPRGTGG 167

[Close]

BLAST of MS001891 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 121/175 (69.14%), Postives = 130/175 (74.29%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPSA 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQV RLQKELDAANADL  Y  +   + 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GVGHVVQSIPGPRPRSYEGASSGYYNQQLSAFPMAYPLPWNESSSGNNMNEGGGG 177
             G+VV  +  P+P           +QQL      Y L    S   N M  G GG
Sbjct: 123 APGNVVDLVFQPQPLP---------SQQLPPLNPVYRLS-GASPVMNQMPRGTGG 167

[Close]

BLAST of MS001891 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48
Identity = 88/111 (79.28%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV RLQ+EL+  NADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

The following BLAST results are available for this feature:

BLAST of MS001891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135327.1	8.0e-99	99.44	protein LATERAL ORGAN BOUNDARIES-like [Momordica charantia]	[more]
KAG6589428.1	8.5e-85	86.96	Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023515750.1	8.5e-85	86.96	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922076.1	8.5e-85	86.96	LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922...	[more]
XP_022922073.1	8.5e-85	86.96	protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita moschata]	[more]

BLAST of MS001891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML4	1.4e-58	69.14	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q8L8Q3	3.3e-47	79.28	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
O04479	1.2e-44	54.65	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.0e-40	68.14	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	1.8e-40	71.43	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of MS001891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2E0	3.9e-99	99.44	protein LATERAL ORGAN BOUNDARIES-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1E272	4.1e-85	86.96	LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1E5J8	4.1e-85	86.96	protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JDL4	1.6e-84	86.41	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148583...	[more]
A0A6J1F030	1.6e-81	81.82	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]

BLAST of MS001891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63090.2	1.0e-59	69.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	1.0e-59	69.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	1.0e-59	69.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	1.0e-59	69.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	2.3e-48	79.28	LOB domain-containing protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..116
None	No IPR available	PANTHER	PTHR31301:SF82	ELONGATED PETIOLULE 1	coord: 1..177
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..177
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..107 e-value: 2.5E-42 score: 143.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.852367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001891.1	MS001891.1	mRNA