MS001890 (gene) Bitter gourd (TR) v1

Overview


Name	MS001890
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	VARLMGL domain-containing protein
Location	scaffold30: 735661 .. 736449 (-)
RNA-Seq Expression	MS001890
Synteny	MS001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGTTGTCCTTCTTTCTTTTCAAGAACTCTCTGGCTGCAAAGATGAGGAAGGGCATCAAAACTTTCTGCAATGGCGATGGTTCTACCTCCACTCTCAACCAACACAAAGCCAACCAAGATCACTTTCCTATCTCGCCCGACGTGCGCTGCAGAAAAAACCCGCCAACCTTGGAGGAGATGATTTTACAGTTGGAGCTAGAGGAGGAGACGGCGAGAAGAGCAAAACTATACAACTATGATGAGATGCGAGGGAGGATGTCGTGTGTAAACAACTCTGATATTTTGCGATCTGCACGGAACGCCTTGAATCAGTATCCTCGGTTTTCGCTTGATGGAAAGGATGCGATGTATCGATCTTCCTTTAGGAACTTGGATGCTGCTGGGCGGAAATCAGTCTGCTGTGAGTATGCTCTCAAAGGGAGAATTCATGAGAATGAGTTCAACTTGACGTTGGAGACAGCCTTACGGTTGCCATCAACGATAGCAGGGGAGAGTGTCGTGTGGCGCAAACCAGGAGTGGTGGCCAAGTTGATGGGTCTCGAGGCAATCCCGATGCCGGTGAATGCTAAAGGTGGCAAGGCAAAGTTAAGCTCTATTTTGAAGAGACAGAATCTAAGGAGGAGAGCTAAGAGGCACGAAAAGGAGAGAAGATTTGGCATGGACTATCCTGGTTCTGATGGTACTATAACAGGCAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTCGTGAAGCCAATTGCAACAGAATCCGCAGCATGGAAAGCCAGGCAATTTCTT

mRNA sequence

ATGAAGGAGTTGTCCTTCTTTCTTTTCAAGAACTCTCTGGCTGCAAAGATGAGGAAGGGCATCAAAACTTTCTGCAATGGCGATGGTTCTACCTCCACTCTCAACCAACACAAAGCCAACCAAGATCACTTTCCTATCTCGCCCGACGTGCGCTGCAGAAAAAACCCGCCAACCTTGGAGGAGATGATTTTACAGTTGGAGCTAGAGGAGGAGACGGCGAGAAGAGCAAAACTATACAACTATGATGAGATGCGAGGGAGGATGTCGTGTGTAAACAACTCTGATATTTTGCGATCTGCACGGAACGCCTTGAATCAGTATCCTCGGTTTTCGCTTGATGGAAAGGATGCGATGTATCGATCTTCCTTTAGGAACTTGGATGCTGCTGGGCGGAAATCAGTCTGCTGTGAGTATGCTCTCAAAGGGAGAATTCATGAGAATGAGTTCAACTTGACGTTGGAGACAGCCTTACGGTTGCCATCAACGATAGCAGGGGAGAGTGTCGTGTGGCGCAAACCAGGAGTGGTGGCCAAGTTGATGGGTCTCGAGGCAATCCCGATGCCGGTGAATGCTAAAGGTGGCAAGGCAAAGTTAAGCTCTATTTTGAAGAGACAGAATCTAAGGAGGAGAGCTAAGAGGCACGAAAAGGAGAGAAGATTTGGCATGGACTATCCTGGTTCTGATGGTACTATAACAGGCAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTCGTGAAGCCAATTGCAACAGAATCCGCAGCATGGAAAGCCAGGCAATTTCTT

Coding sequence (CDS)

ATGAAGGAGTTGTCCTTCTTTCTTTTCAAGAACTCTCTGGCTGCAAAGATGAGGAAGGGCATCAAAACTTTCTGCAATGGCGATGGTTCTACCTCCACTCTCAACCAACACAAAGCCAACCAAGATCACTTTCCTATCTCGCCCGACGTGCGCTGCAGAAAAAACCCGCCAACCTTGGAGGAGATGATTTTACAGTTGGAGCTAGAGGAGGAGACGGCGAGAAGAGCAAAACTATACAACTATGATGAGATGCGAGGGAGGATGTCGTGTGTAAACAACTCTGATATTTTGCGATCTGCACGGAACGCCTTGAATCAGTATCCTCGGTTTTCGCTTGATGGAAAGGATGCGATGTATCGATCTTCCTTTAGGAACTTGGATGCTGCTGGGCGGAAATCAGTCTGCTGTGAGTATGCTCTCAAAGGGAGAATTCATGAGAATGAGTTCAACTTGACGTTGGAGACAGCCTTACGGTTGCCATCAACGATAGCAGGGGAGAGTGTCGTGTGGCGCAAACCAGGAGTGGTGGCCAAGTTGATGGGTCTCGAGGCAATCCCGATGCCGGTGAATGCTAAAGGTGGCAAGGCAAAGTTAAGCTCTATTTTGAAGAGACAGAATCTAAGGAGGAGAGCTAAGAGGCACGAAAAGGAGAGAAGATTTGGCATGGACTATCCTGGTTCTGATGGTACTATAACAGGCAGGTTAAGTTCTTGCAGTTCAAACAATGGGTGCTATGTCGTGAAGCCAATTGCAACAGAATCCGCAGCATGGAAAGCCAGGCAATTTCTT

Protein sequence

MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLEEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSSNNGCYVVKPIATESAAWKARQFL

Homology

[Close]

BLAST of MS001890 vs. NCBI nr
Match: XP_022135499.1 (uncharacterized protein LOC111007440 [Momordica charantia])

HSP 1 Score: 522.7 bits (1345), Expect = 1.8e-144
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKGI+TFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGIRTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM 180
           SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM
Sbjct: 121 SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM 180

Query: 181 GLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS 240
           GLEAIPMPVNAKGGKAKLSSILKR NLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS
Sbjct: 181 GLEAIPMPVNAKGGKAKLSSILKRHNLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS 240

Query: 241 NNGCYVVKPIATESAAWKARQFL 264
           NNGCYVVKPIATESAAWKARQFL
Sbjct: 241 NNGCYVVKPIATESAAWKARQFL 263

[Close]

BLAST of MS001890 vs. NCBI nr
Match: XP_038878557.1 (uncharacterized protein LOC120070753 [Benincasa hispida])

HSP 1 Score: 481.1 bits (1237), Expect = 6.1e-132
Identity = 241/266 (90.60%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGD STSTLNQHK NQD FPISPD+ CR+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDASTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDA---AGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVA 180
           SSFRNLDA   AGRKSVCCEY LKGRIHENEFNLTLETALRLPSTIAGE+VVWRKPGVVA
Sbjct: 121 SSFRNLDAAEKAGRKSVCCEYGLKGRIHENEFNLTLETALRLPSTIAGENVVWRKPGVVA 180

Query: 181 KLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSS 240
           KLMGLEA+PMP+NA+  KA L+SILKRQ+LR+RAKRHEKERRF MDYPGSDGTITGRLSS
Sbjct: 181 KLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRHEKERRFSMDYPGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNGCYVVKPIATESAAWKARQ L
Sbjct: 241 CSSNNGCYVVKPIATESAAWKARQCL 266

[Close]

BLAST of MS001890 vs. NCBI nr
Match: KAA0057827.1 (hypothetical protein E6C27_scaffold274G001140 [Cucumis melo var. makuwa] >TYJ98511.1 hypothetical protein E5676_scaffold350G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 477.2 bits (1227), Expect = 8.8e-131
Identity = 236/266 (88.72%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQHK NQD FPISPD+ CR+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVA 180
           SSFRNLD A   GRKSVCCEY LKGR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVVA
Sbjct: 121 SSFRNLDVAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVVA 180

Query: 181 KLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSS 240
           KLMGLEAIPMP+NA+  KA L+SILKRQ+LR+RAKR EKERRF +DYPGSDGTITGRLSS
Sbjct: 181 KLMGLEAIPMPLNARSSKATLNSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNGCY+VKPIATESAAW+AR+FL
Sbjct: 241 CSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of MS001890 vs. NCBI nr
Match: XP_031736616.1 (uncharacterized protein LOC116402050 [Cucumis sativus] >KGN63550.1 hypothetical protein Csa_014042 [Cucumis sativus])

HSP 1 Score: 474.6 bits (1220), Expect = 5.7e-130
Identity = 235/266 (88.35%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQ K NQD FPISPD+ CR+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVA 180
           SSFRNLDAA   GRKSVCCEY LKGR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVVA
Sbjct: 121 SSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVVA 180

Query: 181 KLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSS 240
           KLMGLEA+PMP+NA+  KA L+SILKRQ+LR+RAKR EKERRF +DYPGSDGTITGRLSS
Sbjct: 181 KLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNGCY+VKPIATESAAW+AR+FL
Sbjct: 241 CSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of MS001890 vs. NCBI nr
Match: KAG6589427.1 (hypothetical protein SDJN03_14850, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 463.0 bits (1190), Expect = 1.7e-126
Identity = 231/267 (86.52%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MK+LSFFLFKNSLAAK+RKGI+TFCNG+ ST+TLNQHK NQD FP+SPD+ C + PPTLE
Sbjct: 1   MKDLSFFLFKNSLAAKIRKGIRTFCNGNASTTTLNQHKTNQDQFPVSPDLHCGQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRG-RMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EMILQLELEEETARRAK YNYD+++G RMSCVNNSDIL SARNALNQYPRFSLDGKDAMY
Sbjct: 61  EMILQLELEEETARRAKCYNYDKIQGRRMSCVNNSDILGSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180
           RSSFRNLDAA   GRKSVCCEYALKGR+HENEFNLTLETALRLPSTIAGE+V+WRKPGVV
Sbjct: 121 RSSFRNLDAAERFGRKSVCCEYALKGRVHENEFNLTLETALRLPSTIAGENVLWRKPGVV 180

Query: 181 AKLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLS 240
           AKLMGLEA+PMP+NA+ GKA LSSI+KRQNLR+RAKRHEKERR  MDYPGSDGTITGRLS
Sbjct: 181 AKLMGLEAMPMPMNARSGKATLSSIMKRQNLRKRAKRHEKERRLSMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGCYVVKPIATESAAWKARQFL 264
           SCSSNNGCYVVKPIATESAAWKA QFL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKASQFL 267

[Close]

BLAST of MS001890 vs. ExPASy TrEMBL
Match: A0A6J1C1L3 (uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007440 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 8.9e-145
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKGI+TFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGIRTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM 180
           SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM
Sbjct: 121 SSFRNLDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLM 180

Query: 181 GLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS 240
           GLEAIPMPVNAKGGKAKLSSILKR NLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS
Sbjct: 181 GLEAIPMPVNAKGGKAKLSSILKRHNLRRRAKRHEKERRFGMDYPGSDGTITGRLSSCSS 240

Query: 241 NNGCYVVKPIATESAAWKARQFL 264
           NNGCYVVKPIATESAAWKARQFL
Sbjct: 241 NNGCYVVKPIATESAAWKARQFL 263

[Close]

BLAST of MS001890 vs. ExPASy TrEMBL
Match: A0A5D3BIJ6 (VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001160 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.3e-131
Identity = 236/266 (88.72%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQHK NQD FPISPD+ CR+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVA 180
           SSFRNLD A   GRKSVCCEY LKGR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVVA
Sbjct: 121 SSFRNLDVAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVVA 180

Query: 181 KLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSS 240
           KLMGLEAIPMP+NA+  KA L+SILKRQ+LR+RAKR EKERRF +DYPGSDGTITGRLSS
Sbjct: 181 KLMGLEAIPMPLNARSSKATLNSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNGCY+VKPIATESAAW+AR+FL
Sbjct: 241 CSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of MS001890 vs. ExPASy TrEMBL
Match: A0A0A0LNU8 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.8e-130
Identity = 235/266 (88.35%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQ K NQD FPISPD+ CR+ PPTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPISPDLHCRQTPPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRNLDAA---GRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVA 180
           SSFRNLDAA   GRKSVCCEY LKGR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVVA
Sbjct: 121 SSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVVA 180

Query: 181 KLMGLEAIPMPVNAKGGKAKLSSILKRQNLRRRAKRHEKERRFGMDYPGSDGTITGRLSS 240
           KLMGLEA+PMP+NA+  KA L+SILKRQ+LR+RAKR EKERRF +DYPGSDGTITGRLSS
Sbjct: 181 KLMGLEAMPMPLNARSSKATLTSILKRQSLRKRAKRQEKERRFSVDYPGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNGCY+VKPIATESAAW+AR+FL
Sbjct: 241 CSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of MS001890 vs. ExPASy TrEMBL
Match: A0A6J1EVK1 (uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC111438186 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.5e-123
Identity = 230/266 (86.47%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQHK NQD FP SPD+ C +N PTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPASPDMSCTQNQPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMI+QLELEEETARR KL NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR
Sbjct: 61  EMIIQLELEEETARRTKLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRN-LDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL 180
           SSFR+  +  GRKSVCCEYAL+GRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL
Sbjct: 121 SSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL 180

Query: 181 MGLEAIPMPVNAKGGKAKLSSILKRQNLRRRA--KRHEKERRFGMDYPGSDGTITGRLSS 240
           MGLEA+P PVNA+ G AKLSSILK+Q+LR+RA  KRHEKERRF MDY GSDGTITGRLSS
Sbjct: 181 MGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNG Y+VKPIATESAAWKAR FL
Sbjct: 241 CSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of MS001890 vs. ExPASy TrEMBL
Match: A0A6J1L4I6 (uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122
Identity = 230/266 (86.47%), Postives = 244/266 (91.73%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGIKTFCNGDGSTSTLNQHKANQDHFPISPDVRCRKNPPTLE 60
           MKELSFFLFKNSLAAKMRKG +TFCNGDGSTSTLNQHK NQD FP SP++ C +N PTLE
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPASPNMPCTQNQPTLE 60

Query: 61  EMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYR 120
           EMILQLELEEETARR KL NYDEMRGRMSCVNNSDILRSA+NALNQYPRFSLDGKDAMYR
Sbjct: 61  EMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSAQNALNQYPRFSLDGKDAMYR 120

Query: 121 SSFRN-LDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL 180
           SSFR+  +  GRKSVCCEYAL+GRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL
Sbjct: 121 SSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKL 180

Query: 181 MGLEAIPMPVNAKGGKAKLSSILKRQNLRRRA--KRHEKERRFGMDYPGSDGTITGRLSS 240
           MGLEA+P PVNA+ G AKLSSILK+Q+LR+RA  KRHEKERRF MDY GSDGTITGRLSS
Sbjct: 181 MGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLSS 240

Query: 241 CSSNNGCYVVKPIATESAAWKARQFL 264
           CSSNNG Y+VKPIATESAAWKAR FL
Sbjct: 241 CSSNNGRYIVKPIATESAAWKARHFL 266

The following BLAST results are available for this feature:

BLAST of MS001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135499.1	1.8e-144	99.24	uncharacterized protein LOC111007440 [Momordica charantia]	[more]
XP_038878557.1	6.1e-132	90.60	uncharacterized protein LOC120070753 [Benincasa hispida]	[more]
KAA0057827.1	8.8e-131	88.72	hypothetical protein E6C27_scaffold274G001140 [Cucumis melo var. makuwa] >TYJ985...	[more]
XP_031736616.1	5.7e-130	88.35	uncharacterized protein LOC116402050 [Cucumis sativus] >KGN63550.1 hypothetical ...	[more]
KAG6589427.1	1.7e-126	86.52	hypothetical protein SDJN03_14850, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS001890 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1L3	8.9e-145	99.24	uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3BIJ6	4.3e-131	88.72	VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LNU8	2.8e-130	88.35	VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=...	[more]
A0A6J1EVK1	9.5e-123	86.47	uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1L4I6	2.1e-122	86.47	uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822...	[more]

BLAST of MS001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032795	DUF3741-associated sequence motif	PFAM	PF14383	VARLMGL	coord: 166..186 e-value: 4.1E-6 score: 26.2
None	No IPR available	PANTHER	PTHR37897	DNAK FAMILY PROTEIN	coord: 1..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001890.1	MS001890.1	mRNA