MS001826 (gene) Bitter gourd (TR) v1

Overview
NameMS001826
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRecQ-mediated genome instability protein 1
Locationscaffold30: 261226 .. 265028 (+)
RNA-Seq ExpressionMS001826
SyntenyMS001826
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGAAGGCGCCTACGACTGAGCTGGTCTTCCGACGAAGCGGAAGACCAAGAAAACGAAGACTACGAACGCGGCCCTCAATGCCCCGATTCCTCCACCGCCTCTCTTCAGCCTCTCATTCTCGACAATCTCAACTCTAATTTTAATCCCAATGTCTCTGAGCCAGTCCAACTTTCCGACGACGACGAACAAGATTTCATCGACGTCTCCGACCATCTCTCGCCTCCTTCTCCGGATTCCGACCACTCCCTCCGCCACTCGCCTGAGGCGAATCCGCTTAGTTATCGCGTCGCTTCCAGCGAGTCATCGTGTCCTGTAACCGACTTCCTTCGTAGACTTGGTTTGAGCTTGAAGAGAGAGTGGTTGGATGCTTGTACCCGTGCCCTAGAAGGGTCTATACCAGGCTTTTTGAGCCTCAACCCGACGGAGAAAGGGAAGCTGTGTTTCGAGCAGTTTTTAGTTTCTGATATGAATTATTCGGGTGCTGGTGTCCTACCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCCGGGCCGTACGTATTGCAGGTTATTCTTATTGTGCCGTGTCCTTGAATTCATCGCCATAAATTAATTTTCTTGCATTTTATTTTTCCACTGTAAGTTTTGGGTTCGCAAACGAAATTCCAAAGATCAAGAGTAAGAATGACCTGCTACATGAGCTAGCCGCAGTTAAAGAGTCCTCGCTGAGTTTTTTTGCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTCCTCTTAGAGGTAGATATCAGACAGCTCCCGCGAGTATTAAGAGGTGCCTTAAGGTGTCCATGACGGATGGTGTTCAACGCGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTTTCTTAATTTTCTCACTCATGGATTAATGACTTTCACCTTTTTCCAACTAGGTCCATGCTTCAAAAATACTTGGTTCGTTGATGATGGGGATCGATTATTTATTGCTTTTCTACAGGTAGTCATCTGTAATGCAAGCGTTCGGCACGGGCTTCTAATGCTAGTTCCTGAAGCTTTAGAGGTTCTAGGAGGCCTGGTTGAGGAGCTGGAGGCAGCTCGGCGGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGGGGAAGAAGGTATTGTTAATGTCAAGAGTACATAGTTTTCATCCATACCTTTCTTTGTTAGTATCCACTGTACAATTTTCATAATCCACGTTCATGGATGATGTCTGTTTCCCCCGTTCCAAACACGTTCTTTTATCCTTTAAAATCGATTTTACTTATAGACTTCACGCATGCACCATAAACTGTACTTCATGGTGGACTTGATCTCTCTTGGTCGTCCTCTTCACATGAGCTTATTATGGCATGATATTCACTGTTTTCTGTATAATTGAAGTTTTAAATATTTTATCAGAACGAGGACAGGTGTGGTTCCTCCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACGCTGTCCAAAGGCAAGTGCAACCTAACAGAATAGTGAGCACGGAACCCCCTTATTCAGACCAAGGTACTCTTGTGGTTATTATCTTCCTTTCCTTTCACTCCTGACAAAAATATTGTAATAAGATCCTTTACATTGACAACAACATTTATGTTCAGTCTGTCAGATTCATGGACTTTAGAGATCTAATAGCTACGCTTTTGCTTGAGCTGGACAAAGTTGCCTAGTTTTTTCTTTCATTACGTACCTTTTCCATTCTCTTTTCTGTTTCAACTATTGATTACTATACTGGGGGAGAACAGGGATAGAACCAAAGAAGTAGAAAATGGAAGAGGAAGGAAAATGCATGTCCACTCTTGAAAGGTTTCATACCCAATTCATTCTGAAACCAATACATTATATATTTGAAGTTATAAAGAAAACAAATCCTCCTAGAATCCAATGCAAATCTCATAGTCAAGTAGAAATGAAGAATTAACTGAATACGACTCCCAATAATTATCTGAACTTAAAAATGCAAAATTACGCAAGGCATTTGATATTTGCCCCTAGCTTAGCAGCCGGCTAAGTTTATCAAGTGGATGCAAGGGTCGTCTTTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCCTTGTCTTGAAATTCATGTAACATCTGATTGAAAAGAGCTCTGTTTTGCTAGATGGCGAATTCTTCCAGTATTTCTTTGTTTTTATCTTTTTTTCTCTCAAGAATTCAAGAGGTCACTATTGCTCATTTGACTGTCAGGTCTTGAAATGTTCCATAGGGGAAATGAAGCACTTACTGCTCCGGCTGGTGACGCATTTACCACTCCAGTCAGCAGAACAAATGCAAATTCTGAGCTGTCTTCTAATCTTGTTTCAAATGTTGAGGAGATCCATTCACATTATGTTCCCAGTAGTAGAGCTAGTACCGAGCCTACCATTTTGTCCAATTCAGTAGAGGAAACCAATATGGTCGATATTGAGCATCCACTCATGTTATCTGGTGATAGAGAGATTCCTTTCACGTACTTGGCTAGTTTATCGGCTAAGTGGGCAGCAGTGAAGGAAAAATCTTCATCAGTTTGTGGAAGAATCAAGGTAGGCAAAAATGTATGCTTTCATTACTAGGTACCTAAGCACTTGGCTGCTGTTTCTCACGGAAGAAATCAGTGGCCTTTTCTTGTTTGTAAGCTGTAAGCTCATCACTGAAGCTTAGAATTTTATTTATCTATCAATCAGATTTGAGTATATGTTAGGTAACTAGTAATAGGGCAATGGAGCTTGGACCATGATCAACTTATAACAGTTTTAGATGAATGTTCAATCTCATTTCCTGTCAATCTCAAGTAGCTCTGCTTAGGGGTGAAGGGAATCCCGTATGTAGATGAGATGACATAACTTTAATCGGCAGCATGGAGTTACATCTTTGGCTGGCAACGTATTTGAAGCATTGAATATACTAAGCATGATTATTGGAAAGAAACTTTTTTGTTCCTAACCCTTTGACTTAAGTACTTGCAACCATGCTTATATTAAATTATGTTGTGCCCGATGAATGAAAATGAAATTGCATGTAAATTGAATTTAATCGTCTCTTTATGTTACTGAAATTGGAAACACAATCTTTGTACTTTGCAGTGCTTTTTGACCGGTGTAAAAGGATTTCAGTTCAGGCAAAGGACAACATACGAGCTACATGTTTATGTTGATGATGGCAGTCTCATTTCTGAGGTTCTCATTGATCACGAAGTGAGTCAGGTTTCATATATTAATATGCTTACCCTAGTCCATGGGAACAATATCTTATCGTTTCTTATGCTCTTTGTAGGTTGTGAAAAAAGAAATTGGCCATGCTCCTAAGGATGTTACAGATGCTCTATCGTCTTCAGATGTTCAAGTAGCGAGCAGTATGAAGGATACCATGAGACAGTTCCAAGTTTTCTTGGTAAATTTTGAGGTAATCTGGTGGCATTCAGTTTTTCCACCTCCAGTTATTGCTCATGCACTTCCTCCCCAGAAACTTGAAAAGATTATGCCTTTTCTTTAGTTTTTACTTGCCATGTCATTGTACTCTCTAGTTAATTGAAGTATGATTCTTTATTATCTTGTTTCATCAAAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTAGTCCTTGAGATGAAGGAAGGTTGTCTGGAGTCCGACGCTTGGTTGCTTTTGAGAAGATTCAAGTGTTTGAATGCCGTTCAAACCGAAGAGCATACCCACATGGACCCTATAGACGTTTCCCCT

mRNA sequence

ATGCCCAGAAGGCGCCTACGACTGAGCTGGTCTTCCGACGAAGCGGAAGACCAAGAAAACGAAGACTACGAACGCGGCCCTCAATGCCCCGATTCCTCCACCGCCTCTCTTCAGCCTCTCATTCTCGACAATCTCAACTCTAATTTTAATCCCAATGTCTCTGAGCCAGTCCAACTTTCCGACGACGACGAACAAGATTTCATCGACGTCTCCGACCATCTCTCGCCTCCTTCTCCGGATTCCGACCACTCCCTCCGCCACTCGCCTGAGGCGAATCCGCTTAGTTATCGCGTCGCTTCCAGCGAGTCATCGTGTCCTGTAACCGACTTCCTTCGTAGACTTGGTTTGAGCTTGAAGAGAGAGTGGTTGGATGCTTGTACCCGTGCCCTAGAAGGGTCTATACCAGGCTTTTTGAGCCTCAACCCGACGGAGAAAGGGAAGCTGTGTTTCGAGCAGTTTTTAGTTTCTGATATGAATTATTCGGGTGCTGGTGTCCTACCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCCGGGCCGTACGTATTGCAGAATGACCTGCTACATGAGCTAGCCGCAGTTAAAGAGTCCTCGCTGAGTTTTTTTGCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTCCTCTTAGAGGTAGATATCAGACAGCTCCCGCGAGTATTAAGAGGTGCCTTAAGGTGTCCATGACGGATGGTGTTCAACGCGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTAGTCATCTGTAATGCAAGCGTTCGGCACGGGCTTCTAATGCTAGTTCCTGAAGCTTTAGAGGTTCTAGGAGGCCTGGTTGAGGAGCTGGAGGCAGCTCGGCGGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGGGGAAGAAGAACGAGGACAGGTGTGGTTCCTCCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACGCTGTCCAAAGGCAAGTGCAACCTAACAGAATAGTGAGCACGGAACCCCCTTATTCAGACCAAGGTCTTGAAATGTTCCATAGGGGAAATGAAGCACTTACTGCTCCGGCTGGTGACGCATTTACCACTCCAGTCAGCAGAACAAATGCAAATTCTGAGCTGTCTTCTAATCTTGTTTCAAATGTTGAGGAGATCCATTCACATTATGTTCCCAGTAGTAGAGCTAGTACCGAGCCTACCATTTTGTCCAATTCAGTAGAGGAAACCAATATGGTCGATATTGAGCATCCACTCATGTTATCTGGTGATAGAGAGATTCCTTTCACGTACTTGGCTAGTTTATCGGCTAAGTGGGCAGCAGTGAAGGAAAAATCTTCATCAGTTTGTGGAAGAATCAAGTGCTTTTTGACCGGTGTAAAAGGATTTCAGTTCAGGCAAAGGACAACATACGAGCTACATGTTTATGTTGATGATGGCAGTCTCATTTCTGAGGTTCTCATTGATCACGAAGTTGTGAAAAAAGAAATTGGCCATGCTCCTAAGGATGTTACAGATGCTCTATCGTCTTCAGATGTTCAAGTAGCGAGCAGTATGAAGGATACCATGAGACAGTTCCAAGTTTTCTTGGTAAATTTTGAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTAGTCCTTGAGATGAAGGAAGGTTGTCTGGAGTCCGACGCTTGGTTGCTTTTGAGAAGATTCAAGTGTTTGAATGCCGTTCAAACCGAAGAGCATACCCACATGGACCCTATAGACGTTTCCCCT

Coding sequence (CDS)

ATGCCCAGAAGGCGCCTACGACTGAGCTGGTCTTCCGACGAAGCGGAAGACCAAGAAAACGAAGACTACGAACGCGGCCCTCAATGCCCCGATTCCTCCACCGCCTCTCTTCAGCCTCTCATTCTCGACAATCTCAACTCTAATTTTAATCCCAATGTCTCTGAGCCAGTCCAACTTTCCGACGACGACGAACAAGATTTCATCGACGTCTCCGACCATCTCTCGCCTCCTTCTCCGGATTCCGACCACTCCCTCCGCCACTCGCCTGAGGCGAATCCGCTTAGTTATCGCGTCGCTTCCAGCGAGTCATCGTGTCCTGTAACCGACTTCCTTCGTAGACTTGGTTTGAGCTTGAAGAGAGAGTGGTTGGATGCTTGTACCCGTGCCCTAGAAGGGTCTATACCAGGCTTTTTGAGCCTCAACCCGACGGAGAAAGGGAAGCTGTGTTTCGAGCAGTTTTTAGTTTCTGATATGAATTATTCGGGTGCTGGTGTCCTACCTGAAAATGTTGATTCTATGCATCTCGTTGACCTCCCCGGGCCGTACGTATTGCAGAATGACCTGCTACATGAGCTAGCCGCAGTTAAAGAGTCCTCGCTGAGTTTTTTTGCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTCCTCTTAGAGGTAGATATCAGACAGCTCCCGCGAGTATTAAGAGGTGCCTTAAGGTGTCCATGACGGATGGTGTTCAACGCGTTTTTGGCATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTAGCACCTGCTGGGTTGAAGGTAGTCATCTGTAATGCAAGCGTTCGGCACGGGCTTCTAATGCTAGTTCCTGAAGCTTTAGAGGTTCTAGGAGGCCTGGTTGAGGAGCTGGAGGCAGCTCGGCGGCGGCTGGTTGATGAAGTGAACAAGCCACCTAGGGGAAGAAGAACGAGGACAGGTGTGGTTCCTCCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACGCTGTCCAAAGGCAAGTGCAACCTAACAGAATAGTGAGCACGGAACCCCCTTATTCAGACCAAGGTCTTGAAATGTTCCATAGGGGAAATGAAGCACTTACTGCTCCGGCTGGTGACGCATTTACCACTCCAGTCAGCAGAACAAATGCAAATTCTGAGCTGTCTTCTAATCTTGTTTCAAATGTTGAGGAGATCCATTCACATTATGTTCCCAGTAGTAGAGCTAGTACCGAGCCTACCATTTTGTCCAATTCAGTAGAGGAAACCAATATGGTCGATATTGAGCATCCACTCATGTTATCTGGTGATAGAGAGATTCCTTTCACGTACTTGGCTAGTTTATCGGCTAAGTGGGCAGCAGTGAAGGAAAAATCTTCATCAGTTTGTGGAAGAATCAAGTGCTTTTTGACCGGTGTAAAAGGATTTCAGTTCAGGCAAAGGACAACATACGAGCTACATGTTTATGTTGATGATGGCAGTCTCATTTCTGAGGTTCTCATTGATCACGAAGTTGTGAAAAAAGAAATTGGCCATGCTCCTAAGGATGTTACAGATGCTCTATCGTCTTCAGATGTTCAAGTAGCGAGCAGTATGAAGGATACCATGAGACAGTTCCAAGTTTTCTTGGTAAATTTTGAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTAGTCCTTGAGATGAAGGAAGGTTGTCTGGAGTCCGACGCTTGGTTGCTTTTGAGAAGATTCAAGTGTTTGAATGCCGTTCAAACCGAAGAGCATACCCACATGGACCCTATAGACGTTTCCCCT

Protein sequence

MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLSDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRLVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMFHRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVEETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDVSP
Homology
[Close]
BLAST of MS001826 vs. NCBI nr
Match: XP_022135185.1 (recQ-mediated genome instability protein 1 [Momordica charantia])

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 580/602 (96.35%), Postives = 580/602 (96.35%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60

Query: 61  DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR 120
           DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR
Sbjct: 61  DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR 120

Query: 121 EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG 180
           EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV 240
           PYVL                     QVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV
Sbjct: 181 PYVL---------------------QVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV 240

Query: 241 QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL 300
           QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL
Sbjct: 241 QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL 300

Query: 301 VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMFH 360
           VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQR VQPNRIVSTEPPYSDQGLEMFH
Sbjct: 301 VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRPVQPNRIVSTEPPYSDQGLEMFH 360

Query: 361 RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE 420
           RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE
Sbjct: 361 RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE 420

Query: 421 ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR 480
           ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR
Sbjct: 421 ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR 480

Query: 481 TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV 540
           TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV
Sbjct: 481 TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV 540

Query: 541 FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV 600
           FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV
Sbjct: 541 FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV 581

Query: 601 SP 603
           SP
Sbjct: 601 SP 581

[Close]
BLAST of MS001826 vs. NCBI nr
Match: KAG7023052.1 (RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 934.1 bits (2413), Expect = 6.0e-268
Identity = 484/621 (77.94%), Postives = 522/621 (84.06%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP---HVASREPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           REWLDAC RA  GS+PGFLSLNP EKGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDLP
Sbjct: 121 REWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTGVVPPLA+RATHAAWPSD V   V  +RIV TEP  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGVVPPLATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSV 420
           HRGNEA+TAP  DAFTTPV R NANSELS+N VSNVEE+H H VPSSRA T  TI+SNS+
Sbjct: 361 HRGNEAVTAPVSDAFTTPVGRPNANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSI 420

Query: 421 EETN------------------MVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
           E+TN                  MVDIEHPL+LSGDRE+PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 EDTNTVNSIEGTNMVNSVEDTDMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDV+V S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVKVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT+EH   DPIDVSP
Sbjct: 601 ECSNAVQTDEHARTDPIDVSP 595

[Close]
BLAST of MS001826 vs. NCBI nr
Match: XP_022921986.1 (recQ-mediated genome instability protein 1 [Cucurbita moschata])

HSP 1 Score: 934.1 bits (2413), Expect = 6.0e-268
Identity = 483/621 (77.78%), Postives = 524/621 (84.38%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP---HVASREPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           REWLDAC RA  GS+PGFLSLNP EKGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDLP
Sbjct: 121 REWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTG+VPPLA+RATHAAWPSD V   V  +RIV TEP  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGMVPPLATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSV 420
           HRGNEA+TAP  DAFTTPVSRTNANSELS+N VSNVEE+H H VPSSR+ T  TI+SNS+
Sbjct: 361 HRGNEAVTAPVSDAFTTPVSRTNANSELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSI 420

Query: 421 EETN------------------MVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
           E+TN                  MVDIEHPL+LSGDR++PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 EDTNTVNSIEGTNMVNSVEDTDMVDIEHPLILSGDRKMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDV+V S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVKVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT EH  +DPIDVSP
Sbjct: 601 ECSNAVQTNEHARIDPIDVSP 595

[Close]
BLAST of MS001826 vs. NCBI nr
Match: KAG6589368.1 (RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 930.6 bits (2404), Expect = 6.7e-267
Identity = 483/621 (77.78%), Postives = 521/621 (83.90%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLS PSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSRPSPDSDHSLRHSPEPNP---HVASREPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           REWLDAC RA  GS+PGFLSLNP EKGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDLP
Sbjct: 121 REWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTGVVPPLA+RATHAAWPSD V   V  +RIV TEP  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGVVPPLATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSV 420
           HRGNEA+TAP  DAFTTPV R NANSELS+N VSNVEE+H H VPSSRA T  TI+SNS+
Sbjct: 361 HRGNEAVTAPVSDAFTTPVGRPNANSELSTNFVSNVEEVHLHSVPSSRARTVSTIMSNSI 420

Query: 421 EETN------------------MVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
           E+TN                  MVDIEHPL+LSGDRE+PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 EDTNTVNSIEGTNMVNSVEDTDMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDV+V S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVKVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT+EH   DPIDVSP
Sbjct: 601 ECSNAVQTDEHARTDPIDVSP 595

[Close]
BLAST of MS001826 vs. NCBI nr
Match: XP_022988244.1 (recQ-mediated genome instability protein 1 [Cucurbita maxima])

HSP 1 Score: 929.1 bits (2400), Expect = 1.9e-266
Identity = 484/621 (77.94%), Postives = 522/621 (84.06%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED+ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDRENEDFEHYPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPY---VASCEPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           R WLDAC RA  GSIPGFLSLNP  KGKLCFEQFLVSDMNY+GAGVLPENVDSMHL+DLP
Sbjct: 121 RAWLDACIRAHHGSIPGFLSLNPAGKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLIDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTGVVPPLA RATHAAWPSD VQ  V  +RIV T P  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGVVPPLARRATHAAWPSDTVQEPVHSSRIVDTAPSCSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILS--- 420
           HRGNEA+T+P  DAFTTPVSRTNA+SELS+N VSNVEE+H H VPSSRA T  TI+S   
Sbjct: 361 HRGNEAVTSPVCDAFTTPVSRTNAHSELSTNFVSNVEEVHLHSVPSSRARTVSTIVSNSI 420

Query: 421 ---------------NSVEETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
                          NSVE+TNMVDIEHPL+LSGDRE+PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 ENTNTVNSIEGTNMVNSVEDTNMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDVQV S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVQVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT EH  +DPIDVSP
Sbjct: 601 ECSNAVQTNEHARLDPIDVSP 595

[Close]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match: Q5XUX6 (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 6.5e-124
Identity = 287/661 (43.42%), Postives = 378/661 (57.19%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTA-SLQPLILDNLNSNFNPNVSEPVQL 60
           M RRRL+L +SSDE E+ E      G        A S+QP    +++SN NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  SDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPL--SYRVASSESSCPVTDFLRRLGLS 120
           S   E + IDV  +  P  PDS       P   P+  S  V+ ++   P+++ L R+G+ 
Sbjct: 61  S---EVEIIDVFGNPQPTPPDSS-----IPTPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVD 180
           LKREW  +C   LE SIP F  L+   K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMT 240
           L GP+VL                     QVDEIVNI CPL+GRY+ A A +KRCLK+SMT
Sbjct: 181 LAGPFVL---------------------QVDEIVNIGCPLKGRYENANAGLKRCLKLSMT 240

Query: 241 DGVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAAR 300
           DGVQRVFGMEYRPIKDL+VLAPAGLK+V+ +  VRHGLLMLVPE +EVLGG+VEELE AR
Sbjct: 241 DGVQRVFGMEYRPIKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEAR 300

Query: 301 RRLVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDA---------VQRQVQPNRIVSTE 360
           +RLV EVNKPPRG+RTR GVVP L +RAT AAW  +              V  +   +  
Sbjct: 301 KRLVVEVNKPPRGKRTRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNAS 360

Query: 361 PPYSDQGLEMF----HRGNEALTAPA-----------------------GDAFTTPVSRT 420
              ++QG+ +     H  + A+  P                        G+   + +  T
Sbjct: 361 HTQANQGIPVHVTRTHNSSRAMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHST 420

Query: 421 NAN--------------------------------SELSSNLVSNVEEIHSHYVPSSRAS 480
           ++N                                 + +SN+ S VEE+H   + + R  
Sbjct: 421 SSNIHRAASTAGTGTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEMH---IDTGRVR 480

Query: 481 TEPTILSNS------VEETNM-VDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVC 540
              T +  S       E +NM VD+E P +LS + E PFTYLA LS KWA +K+    V 
Sbjct: 481 DTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQ 540

Query: 541 GRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSS 583
           GRIKCFLTGVK FQF+Q++TYEL  YVDDGSLI E+L+ ++VV+K IGH+  +VT ALSS
Sbjct: 541 GRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSS 600

[Close]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match: Q7XRV0 (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-90
Identity = 228/637 (35.79%), Postives = 313/637 (49.14%), Query Frame = 0 

Query: 89  PEANPLSYRVASSESSCPVTDFLRRLGLSLKREWLDACTRALEGSIPGFLSLNPTE-KGK 148
           P + P+S   A S     V +FLR LGL L+ EWL++C       +PGF  L   E   +
Sbjct: 194 PSSTPVS---ALSGPLRQVDEFLRGLGLRLRPEWLESCA----AGVPGFYGLGGVEAMAR 253

Query: 149 LCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPGPYVLQNDLLHELAAVKESSLSFFAFQV 208
            CFEQFL +DMN  GAGVLPE V SMH   L GP VL                     QV
Sbjct: 254 RCFEQFLFADMNACGAGVLPEGVGSMHNAVLDGPLVL---------------------QV 313

Query: 209 DEIVNISCPLRGRYQTAPASIKRCLKVSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVIC 268
           DEIVN+S PLR RY+ A A  KRCLK+SMTDG+QR++GMEYRPIKDLEVLAPAG K+VI 
Sbjct: 314 DEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGMEYRPIKDLEVLAPAGFKIVIR 373

Query: 269 NASVRHGLLMLVPEALEVLGGLVEELEAARRRLVDEVNKPPRGRRTRTGVVPPLASRATH 328
           N  +R GL MLVPE +E+LGG+ +EL+ AR RLV EVNKPPRG+R + G+  PL+SRAT 
Sbjct: 374 NVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNKPPRGKRKQGGL--PLSSRATL 433

Query: 329 AAWPSDA--------------------------------VQRQVQP-------------- 388
           AAWP++A                                V R  QP              
Sbjct: 434 AAWPTNANATNDAEQGASVPRTVNTPHPTRLGNASHASQVGRTTQPMVDNLIPHVVVSNA 493

Query: 389 ----------------------NRIVSTEPPYS--------------------------- 448
                                 N+  S    Y+                           
Sbjct: 494 QEQSRHIQEITMQGQPTSLNRHNKEASASYRYNAQCSISGTTRAMADEHVLVSNAQEQSP 553

Query: 449 --------DQGLEMFHRGNEALTAPA----GDAFTTPVSRTNANSELSSNLV-SNVEE-- 508
                   DQ   +  R  EA  + +         +  +R  A+  +  + V +NV E  
Sbjct: 554 HIQEITMQDQSTSLNGRNKEASASTSYRYNAQCSISGTTRAMADERVDPSFVGNNVHEQM 613

Query: 509 -------IHSHYVPSSRASTEPTILSNSVEETNMV------------------------- 568
                  +  H   SS +  E ++ + S  ++ +                          
Sbjct: 614 QRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHGVGNTGTRSGEATRSSNVDDGIN 673

Query: 569 DIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQRTTYEL 583
           +I HP+ L G+ E PFTY+ ++ A W   ++    + G+IK  +T VK FQ++Q   Y+L
Sbjct: 674 NIGHPISLCGENEKPFTYIFNMLADWGVQQDTVPYIQGKIKGLITSVKRFQYKQSMQYDL 733

[Close]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match: Q6DDH2 (RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-14
Identity = 57/175 (32.57%), Postives = 86/175 (49.14%), Query Frame = 0 

Query: 122 WLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPGP 181
           WL+AC   ++       SL   E  K  FEQ+L++D+      VLP N+      +L G 
Sbjct: 27  WLEACINWIQEE--NGSSLLQAEINKQVFEQWLLTDLRDLEFPVLPANITDSLKCELNGF 86

Query: 182 YVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGVQ 241
           + +Q D L +++    S L     +      ++C  +   +   A   R L + +TDG Q
Sbjct: 87  HAVQMDSLVDISLPAYSQLQKLKGKDSTNEQVTCTTQQSQKPWEAKPTRMLMLQLTDGTQ 146

Query: 242 RVFGMEYRPIKDLEVLAPAGLKVVICNASV-RHGLLMLVPEALEVLGGLVEELEA 296
            +  MEYRPI+ L      G K+V+    V R G+L+L PE ++VLGG VE L A
Sbjct: 147 HIQAMEYRPIQALNANLSPGTKMVLQGTIVCRLGVLLLKPENVKVLGGEVEALVA 199

[Close]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match: Q5ZHV8 (RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.1e-13
Identity = 60/220 (27.27%), Postives = 102/220 (46.36%), Query Frame = 0 

Query: 122 WLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPGP 181
           WL+AC   ++    G  +L+  +  +  FEQ+L++D+      +LP+ +      +L G 
Sbjct: 26  WLEACINWIQEENGGG-NLSQAQISRQVFEQWLLTDLRDLEYPILPDGILDAPKGELSGF 85

Query: 182 YVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGVQ 241
           Y LQ D L +++    S L     +      ++   +   +   A   R L + +TDG+ 
Sbjct: 86  YSLQIDSLLDVSQPAYSQLQKIRGKSTVNEEVTANTQAFQKPWEAKPTRMLMLQLTDGIH 145

Query: 242 RVFGMEYRPIKDLEVLAPAGLKVVI-CNASVRHGLLMLVPEALEVLGGLVEEL------E 301
           ++ GMEY+P+  L    P G K+ +  N + R G+L+L PE +++LGG V+ L      E
Sbjct: 146 QIQGMEYQPVPVLHSNLPPGTKITVHGNVAYRLGVLLLKPENVKLLGGEVDALLEEYSQE 205

Query: 302 AARRRLVDEVNKPPRGRRT-RTGVVPPLASRATHAAWPSD 334
               RL+ E   P   R+     +VP           PSD
Sbjct: 206 RVLARLLGEAENPDSVRQPGHEQIVPGPVDELGQTLGPSD 244

[Close]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match: Q9H9A7 (RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-12
Identity = 53/175 (30.29%), Postives = 93/175 (53.14%), Query Frame = 0 

Query: 122 WLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPGP 181
           WL+AC   ++      ++L+  +  K  FEQ+L++D+      +LP+ +  +   +L G 
Sbjct: 26  WLEACINWIQEE-NNNVNLSQAQMNKQVFEQWLLTDLRDLEHPLLPDGILEIPKGELNGF 85

Query: 182 YVLQNDLLHELAAVKESSLSFFAFQ--VDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 241
           Y LQ + L +++    S +     +   +++V     +  +   A  S  R L + +TDG
Sbjct: 86  YALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPS--RMLMLQLTDG 145

Query: 242 VQRVFGMEYRPIKDLEVLAPAGLKVVIC-NASVRHGLLMLVPEALEVLGGLVEEL 294
           + ++ GMEY+PI  L    P G K++I  N S R G+L+L PE ++VLGG V+ L
Sbjct: 146 IVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDAL 197

[Close]
BLAST of MS001826 vs. ExPASy TrEMBL
Match: A0A6J1C0G7 (RecQ-mediated genome instability protein 1 OS=Momordica charantia OX=3673 GN=LOC111007213 PE=3 SV=1)

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 580/602 (96.35%), Postives = 580/602 (96.35%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60

Query: 61  DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR 120
           DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR
Sbjct: 61  DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLKR 120

Query: 121 EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG 180
           EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG
Sbjct: 121 EWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLPG 180

Query: 181 PYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV 240
           PYVL                     QVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV
Sbjct: 181 PYVL---------------------QVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDGV 240

Query: 241 QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL 300
           QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL
Sbjct: 241 QRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRRL 300

Query: 301 VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMFH 360
           VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQR VQPNRIVSTEPPYSDQGLEMFH
Sbjct: 301 VDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRPVQPNRIVSTEPPYSDQGLEMFH 360

Query: 361 RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE 420
           RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE
Sbjct: 361 RGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSVE 420

Query: 421 ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR 480
           ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR
Sbjct: 421 ETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQR 480

Query: 481 TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV 540
           TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV
Sbjct: 481 TTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSSSDVQVASSMKDTMRQFQV 540

Query: 541 FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV 600
           FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV
Sbjct: 541 FLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRFKCLNAVQTEEHTHMDPIDV 581

Query: 601 SP 603
           SP
Sbjct: 601 SP 581

[Close]
BLAST of MS001826 vs. ExPASy TrEMBL
Match: A0A6J1E2W4 (RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111430076 PE=3 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.9e-268
Identity = 483/621 (77.78%), Postives = 524/621 (84.38%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDHENEDFEHDPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNP---HVASREPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           REWLDAC RA  GS+PGFLSLNP EKGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDLP
Sbjct: 121 REWLDACIRAHHGSVPGFLSLNPAEKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTG+VPPLA+RATHAAWPSD V   V  +RIV TEP  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGMVPPLATRATHAAWPSDTVPEPVHSSRIVDTEPSRSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNSV 420
           HRGNEA+TAP  DAFTTPVSRTNANSELS+N VSNVEE+H H VPSSR+ T  TI+SNS+
Sbjct: 361 HRGNEAVTAPVSDAFTTPVSRTNANSELSTNFVSNVEEVHLHSVPSSRSRTVSTIMSNSI 420

Query: 421 EETN------------------MVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
           E+TN                  MVDIEHPL+LSGDR++PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 EDTNTVNSIEGTNMVNSVEDTDMVDIEHPLILSGDRKMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDV+V S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVKVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT EH  +DPIDVSP
Sbjct: 601 ECSNAVQTNEHARIDPIDVSP 595

[Close]
BLAST of MS001826 vs. ExPASy TrEMBL
Match: A0A6J1JL11 (RecQ-mediated genome instability protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111485556 PE=3 SV=1)

HSP 1 Score: 929.1 bits (2400), Expect = 9.4e-267
Identity = 484/621 (77.94%), Postives = 522/621 (84.06%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQLS 60
           MPRRRLRLS SSD  ED+ENED+E  PQCPDSST SLQP I+DNLNS+FNPNVSEPVQLS
Sbjct: 1   MPRRRLRLSCSSD--EDRENEDFEHYPQCPDSSTTSLQPPIIDNLNSHFNPNVSEPVQLS 60

Query: 61  -DDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSLK 120
            DDDEQDFIDVS+HLSPPSPDSDHSLRHSPE NP    VAS E SCPV++FLR LGLSLK
Sbjct: 61  DDDDEQDFIDVSEHLSPPSPDSDHSLRHSPEPNPY---VASCEPSCPVSEFLRGLGLSLK 120

Query: 121 REWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDLP 180
           R WLDAC RA  GSIPGFLSLNP  KGKLCFEQFLVSDMNY+GAGVLPENVDSMHL+DLP
Sbjct: 121 RAWLDACIRAHHGSIPGFLSLNPAGKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLIDLP 180

Query: 181 GPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTDG 240
           GPYVL                     QVDEIVNISCPL+GRYQTAPASIKRCLK+SMTDG
Sbjct: 181 GPYVL---------------------QVDEIVNISCPLKGRYQTAPASIKRCLKLSMTDG 240

Query: 241 VQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARRR 300
           VQRVFGMEYRPIK LEVLAPAGLKVVICN SVR G+LMLVPEA EVLGGLVEELE+AR+R
Sbjct: 241 VQRVFGMEYRPIKGLEVLAPAGLKVVICNVSVRRGVLMLVPEAFEVLGGLVEELESARQR 300

Query: 301 LVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEMF 360
           LVDEVNKPPRGRRTRTGVVPPLA RATHAAWPSD VQ  V  +RIV T P  SDQG+ MF
Sbjct: 301 LVDEVNKPPRGRRTRTGVVPPLARRATHAAWPSDTVQEPVHSSRIVDTAPSCSDQGVHMF 360

Query: 361 HRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILS--- 420
           HRGNEA+T+P  DAFTTPVSRTNA+SELS+N VSNVEE+H H VPSSRA T  TI+S   
Sbjct: 361 HRGNEAVTSPVCDAFTTPVSRTNAHSELSTNFVSNVEEVHLHSVPSSRARTVSTIVSNSI 420

Query: 421 ---------------NSVEETNMVDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSV 480
                          NSVE+TNMVDIEHPL+LSGDRE+PFTYLASLSAKWA+ KEKS SV
Sbjct: 421 ENTNTVNSIEGTNMVNSVEDTNMVDIEHPLILSGDREMPFTYLASLSAKWASGKEKSPSV 480

Query: 481 CGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALS 540
            G+IKCFLTGVKGFQFRQRTTY+LH YVDDGSLISEVLIDHE V++ IGH+PKDVTDAL 
Sbjct: 481 RGKIKCFLTGVKGFQFRQRTTYDLHAYVDDGSLISEVLIDHEAVQQAIGHSPKDVTDALG 540

Query: 541 SSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLESDAWLLLRRF 600
           SSDVQV S MK+ +RQFQ+FLVNFEGTMLVEMN+TSSLPVVLEM+EGCLESDAWLLLRR 
Sbjct: 541 SSDVQVVSGMKEALRQFQIFLVNFEGTMLVEMNRTSSLPVVLEMEEGCLESDAWLLLRRL 595

Query: 601 KCLNAVQTEEHTHMDPIDVSP 603
           +C NAVQT EH  +DPIDVSP
Sbjct: 601 ECSNAVQTNEHARLDPIDVSP 595

[Close]
BLAST of MS001826 vs. ExPASy TrEMBL
Match: A0A0A0LNV2 (RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=3 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 1.0e-249
Identity = 462/631 (73.22%), Postives = 504/631 (79.87%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQL- 60
           M RRRLRLSWSSD       ED E+   CPDSS  SLQP+ILDNLNS+FNPNVSEPVQ+ 
Sbjct: 1   MTRRRLRLSWSSD-------EDLEQDSHCPDSSPTSLQPIILDNLNSHFNPNVSEPVQVP 60

Query: 61  -SDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSL 120
            SDDDEQ FIDVSDHLSPPSPDSDHSL HSP+ NPL   + S+   CPV+DFLR LGLSL
Sbjct: 61  DSDDDEQHFIDVSDHLSPPSPDSDHSLPHSPDLNPLIPGLVSTHPPCPVSDFLRGLGLSL 120

Query: 121 KREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDL 180
           KREWLDAC R+L+GS+PGF SLN +EKGKLCFEQFLVSDMNY GAGVLPENVDSMHLVDL
Sbjct: 121 KREWLDACIRSLQGSVPGFFSLNHSEKGKLCFEQFLVSDMNYVGAGVLPENVDSMHLVDL 180

Query: 181 PGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTD 240
           PGPYVL                     QVDEIVNISC L+GRYQTAPA+IKRCLK+SMTD
Sbjct: 181 PGPYVL---------------------QVDEIVNISCALKGRYQTAPANIKRCLKLSMTD 240

Query: 241 GVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARR 300
           GVQR+FGMEYRPIK+LEVLAPAGLKVVI N SVR GLLMLVPEA EVLGGLVEELEAAR+
Sbjct: 241 GVQRIFGMEYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARK 300

Query: 301 RLVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEM 360
           RLVDEVNKPPRG RTRTGVVP LASRAT AAWPSD VQ    P+R+V  EP +S+QG  M
Sbjct: 301 RLVDEVNKPPRGSRTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARM 360

Query: 361 FHRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILS-- 420
           FHRGNEA TAP  DAFTTPVSRTNANSELSSN VSNVEEIHSH +PS RA TEPTI+   
Sbjct: 361 FHRGNEAFTAPVADAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNS 420

Query: 421 -------------------------NSVEETNMVDIEHPLMLSGDREIPFTYLASLSAKW 480
                                    NSVE+T MVDIEHPL+LSGDREIPFTYLASLSAK 
Sbjct: 421 VEDSSVVNSVDNTNMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKL 480

Query: 481 AAVKEKSSSVCGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGH 540
           AA K+KS  V GRIKCFLTGVKGFQF++RT YEL VYVDDGSLISEVLIDHEVV+K IGH
Sbjct: 481 AAAKDKSPLVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGH 540

Query: 541 APKDVTDALSSSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLE 600
           +PKDVTDA+ SSDV+V S+MK+T+RQFQ+FL+NFEGTMLVEMN+TS LPVVLEM EGCLE
Sbjct: 541 SPKDVTDAIDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLE 600

Query: 601 SDAWLLLRRFKCLNAVQTEEHTHMDPIDVSP 603
           SDA LLLRR  C N+V T+EH  +  IDVSP
Sbjct: 601 SDARLLLRRLACSNSVPTDEHARI--IDVSP 601

[Close]
BLAST of MS001826 vs. ExPASy TrEMBL
Match: A0A1S3CLI7 (RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=3 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.8e-246
Identity = 462/631 (73.22%), Postives = 503/631 (79.71%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTASLQPLILDNLNSNFNPNVSEPVQL- 60
           M RRRLRLS SSD       ED E+   C DSS  SLQP+ILDNLNS+FNPNVSEPVQ+ 
Sbjct: 1   MTRRRLRLSSSSD-------EDLEQDSHCLDSSPTSLQPIILDNLNSHFNPNVSEPVQVP 60

Query: 61  -SDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPLSYRVASSESSCPVTDFLRRLGLSL 120
            SDDDEQ FIDVSDHLSPPSPDSDHSL HSP+ NPLS  +AS+   CPV+DFLR LGLSL
Sbjct: 61  DSDDDEQHFIDVSDHLSPPSPDSDHSLPHSPDPNPLSPGLASTHPPCPVSDFLRGLGLSL 120

Query: 121 KREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVDL 180
           KREWL AC R+L+ S+PGF SLN + KGKLCFEQFLVSDMNY+GAGVLPENVDSMHLVDL
Sbjct: 121 KREWLGACIRSLQESVPGFFSLNHSAKGKLCFEQFLVSDMNYAGAGVLPENVDSMHLVDL 180

Query: 181 PGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMTD 240
           PGPYVL                     QVDEIVNISC L+GRYQTAPA+IKRCLK+SMTD
Sbjct: 181 PGPYVL---------------------QVDEIVNISCALKGRYQTAPANIKRCLKLSMTD 240

Query: 241 GVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAARR 300
           GVQRVFGMEYRPIKDLEVLAPAGLKVVI + SVR GLLMLVPEA EVLGGLVEELEAAR+
Sbjct: 241 GVQRVFGMEYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARK 300

Query: 301 RLVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDAVQRQVQPNRIVSTEPPYSDQGLEM 360
           RLVDEVNKPPRGRRTRTGVVP LASRATHAAWPSD VQ     +R+V  EP  SDQG  +
Sbjct: 301 RLVDEVNKPPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARL 360

Query: 361 FHRGNEALTAPAGDAFTTPVSRTNANSELSSNLVSNVEEIHSHYVPSSRASTEPTILSNS 420
           FHRGNEA +AP  DAFTTPVSRTNANSELSSN VSNVEEI SH +PS RAS EPTI+ NS
Sbjct: 361 FHRGNEAFSAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNS 420

Query: 421 VEETN---------------------------MVDIEHPLMLSGDREIPFTYLASLSAKW 480
           VE+T+                           MVDIEHPL+LSGDREIPFTYLASLSAK 
Sbjct: 421 VEDTSVVNSVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKL 480

Query: 481 AAVKEKSSSVCGRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGH 540
           AA KEK  SV GRIKCFLTGVKGFQF+QRT YEL V+VDDGSLISEVLID+EVV+K IGH
Sbjct: 481 AAAKEKCPSVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGH 540

Query: 541 APKDVTDALSSSDVQVASSMKDTMRQFQVFLVNFEGTMLVEMNKTSSLPVVLEMKEGCLE 600
           +PKDVTDA+ SSDV+V S+MK+T+RQFQ+FL+NFEGTMLVEMNKTSSLPVVLEM EGCLE
Sbjct: 541 SPKDVTDAMDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLE 600

Query: 601 SDAWLLLRRFKCLNAVQTEEHTHMDPIDVSP 603
           SDA LLLRR  C NAV T+EH  +  IDVSP
Sbjct: 601 SDARLLLRRLACSNAVPTDEHARI--IDVSP 601

[Close]
BLAST of MS001826 vs. TAIR 10
Match: AT5G63540.1 (Domain of unknown function (DUF1767) )

HSP 1 Score: 446.0 bits (1146), Expect = 4.6e-125
Identity = 287/661 (43.42%), Postives = 378/661 (57.19%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTA-SLQPLILDNLNSNFNPNVSEPVQL 60
           M RRRL+L +SSDE E+ E      G        A S+QP    +++SN NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  SDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPL--SYRVASSESSCPVTDFLRRLGLS 120
           S   E + IDV  +  P  PDS       P   P+  S  V+ ++   P+++ L R+G+ 
Sbjct: 61  S---EVEIIDVFGNPQPTPPDSS-----IPTPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVD 180
           LKREW  +C   LE SIP F  L+   K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMT 240
           L GP+VL                     QVDEIVNI CPL+GRY+ A A +KRCLK+SMT
Sbjct: 181 LAGPFVL---------------------QVDEIVNIGCPLKGRYENANAGLKRCLKLSMT 240

Query: 241 DGVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAAR 300
           DGVQRVFGMEYRPIKDL+VLAPAGLK+V+ +  VRHGLLMLVPE +EVLGG+VEELE AR
Sbjct: 241 DGVQRVFGMEYRPIKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEAR 300

Query: 301 RRLVDEVNKPPRGRRTRTGVVPPLASRATHAAWPSDA---------VQRQVQPNRIVSTE 360
           +RLV EVNKPPRG+RTR GVVP L +RAT AAW  +              V  +   +  
Sbjct: 301 KRLVVEVNKPPRGKRTRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNAS 360

Query: 361 PPYSDQGLEMF----HRGNEALTAPA-----------------------GDAFTTPVSRT 420
              ++QG+ +     H  + A+  P                        G+   + +  T
Sbjct: 361 HTQANQGIPVHVTRTHNSSRAMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHST 420

Query: 421 NAN--------------------------------SELSSNLVSNVEEIHSHYVPSSRAS 480
           ++N                                 + +SN+ S VEE+H   + + R  
Sbjct: 421 SSNIHRAASTAGTGTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEMH---IDTGRVR 480

Query: 481 TEPTILSNS------VEETNM-VDIEHPLMLSGDREIPFTYLASLSAKWAAVKEKSSSVC 540
              T +  S       E +NM VD+E P +LS + E PFTYLA LS KWA +K+    V 
Sbjct: 481 DTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQ 540

Query: 541 GRIKCFLTGVKGFQFRQRTTYELHVYVDDGSLISEVLIDHEVVKKEIGHAPKDVTDALSS 583
           GRIKCFLTGVK FQF+Q++TYEL  YVDDGSLI E+L+ ++VV+K IGH+  +VT ALSS
Sbjct: 541 GRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSS 600

[Close]
BLAST of MS001826 vs. TAIR 10
Match: AT5G63540.2 (Domain of unknown function (DUF1767) )

HSP 1 Score: 426.8 bits (1096), Expect = 2.9e-119
Identity = 286/694 (41.21%), Postives = 377/694 (54.32%), Query Frame = 0 

Query: 1   MPRRRLRLSWSSDEAEDQENEDYERGPQCPDSSTA-SLQPLILDNLNSNFNPNVSEPVQL 60
           M RRRL+L +SSDE E+ E      G        A S+QP    +++SN NPN  E + +
Sbjct: 1   MRRRRLQLRYSSDEEEEDETGTSGVGDSVQSFGIASSIQP--ETSVSSNSNPNPGERIAI 60

Query: 61  SDDDEQDFIDVSDHLSPPSPDSDHSLRHSPEANPL--SYRVASSESSCPVTDFLRRLGLS 120
           S   E + IDV  +  P  PDS       P   P+  S  V+ ++   P+++ L R+G+ 
Sbjct: 61  S---EVEIIDVFGNPQPTPPDSS-----IPTPYPVYPSESVSGNDYESPISEVLSRMGIK 120

Query: 121 LKREWLDACTRALEGSIPGFLSLNPTEKGKLCFEQFLVSDMNYSGAGVLPENVDSMHLVD 180
           LKREW  +C   LE SIP F  L+   K K CFEQF+  DMN  G GVLP NV SM+ ++
Sbjct: 121 LKREWWVSCLSGLETSIPQFSYLDVAAKAKHCFEQFMFFDMNLCGGGVLPPNVASMNRIE 180

Query: 181 LPGPYVLQNDLLHELAAVKESSLSFFAFQVDEIVNISCPLRGRYQTAPASIKRCLKVSMT 240
           L GP+VL                     QVDEIVNI CPL+GRY+ A A +KRCLK+SMT
Sbjct: 181 LAGPFVL---------------------QVDEIVNIGCPLKGRYENANAGLKRCLKLSMT 240

Query: 241 DGVQRVFGMEYRPIKDLEVLAPAGLKVVICNASVRHGLLMLVPEALEVLGGLVEELEAAR 300
           DGVQRVFGMEYRPIKDL+VLAPAGLK+V+ +  VRHGLLMLVPE +EVLGG+VEELE AR
Sbjct: 241 DGVQRVFGMEYRPIKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEAR 300

Query: 301 RRLVDEVNKPPRGRR---------------------------------TRTGVVPPLASR 360
           +RLV EVNKPPRG+                                  TR GVVP L +R
Sbjct: 301 KRLVVEVNKPPRGKSWKDYLQPVCFTDFFGYSFFDLENRDWFGVCLTITRVGVVPSLTTR 360

Query: 361 ATHAAWPSDA---------VQRQVQPNRIVSTEPPYSDQGLEMF----HRGNEALTAPA- 420
           AT AAW  +              V  +   +     ++QG+ +     H  + A+  P  
Sbjct: 361 ATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEPLA 420

Query: 421 ----------------------GDAFTTPVSRTNAN------------------------ 480
                                 G+   + +  T++N                        
Sbjct: 421 STNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACSGARSF 480

Query: 481 --------SELSSNLVSNVEEIHSHYVPSSRASTEPTILSNS------VEETNM-VDIEH 540
                    + +SN+ S VEE+H   + + R     T +  S       E +NM VD+E 
Sbjct: 481 ANNVGGNSLDQTSNVTSFVEEMH---IDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEG 540

Query: 541 PLMLSGDREIPFTYLASLSAKWAAVKEKSSSVCGRIKCFLTGVKGFQFRQRTTYELHVYV 583
           P +LS + E PFTYLA LS KWA +K+    V GRIKCFLTGVK FQF+Q++TYEL  YV
Sbjct: 541 PSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYV 600

The following BLAST results are available for this feature:
BLAST of MS001826 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022135185.10.0e+0096.35recQ-mediated genome instability protein 1 [Momordica charantia][more]
KAG7023052.16.0e-26877.94RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subs... [more]
XP_022921986.16.0e-26877.78recQ-mediated genome instability protein 1 [Cucurbita moschata][more]
KAG6589368.16.7e-26777.78RecQ-mediated genome instability protein 1, partial [Cucurbita argyrosperma subs... [more]
XP_022988244.11.9e-26677.94recQ-mediated genome instability protein 1 [Cucurbita maxima][more]
BLAST of MS001826 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5XUX66.5e-12443.42RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM... [more]
Q7XRV01.2e-9035.79RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39... [more]
Q6DDH21.1e-1432.57RecQ-mediated genome instability protein 1 OS=Xenopus laevis OX=8355 GN=rmi1 PE=... [more]
Q5ZHV82.1e-1327.27RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2... [more]
Q9H9A71.0e-1230.29RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 ... [more]
BLAST of MS001826 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C0G70.0e+0096.35RecQ-mediated genome instability protein 1 OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1E2W42.9e-26877.78RecQ-mediated genome instability protein 1 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JL119.4e-26777.94RecQ-mediated genome instability protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A0A0LNV21.0e-24973.22RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G0... [more]
A0A1S3CLI71.8e-24673.22RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC1035023... [more]
BLAST of MS001826 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63540.14.6e-12543.42Domain of unknown function (DUF1767) [more]
AT5G63540.22.9e-11941.21Domain of unknown function (DUF1767) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 108..222
e-value: 1.3E-19
score: 81.2
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 113..298
e-value: 9.2E-32
score: 110.6
IPR032199Recq-mediated genome instability protein 1, C-terminal OB-fold domainPFAMPF16099RMI1_Ccoord: 440..580
e-value: 2.8E-33
score: 114.8
IPR042470RecQ mediated genome instability protein, N-terminal, subdomain 2GENE3D2.40.50.770coord: 157..303
e-value: 2.0E-22
score: 81.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR14790:SF15RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1coord: 101..386
NoneNo IPR availablePANTHERPTHR14790:SF15RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1coord: 385..584
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1coord: 385..584
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1coord: 101..386

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001826.1MS001826.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031422 RecQ family helicase-topoisomerase III complex
molecular_function GO:0000166 nucleotide binding