MS001817 (gene) Bitter gourd (TR) v1

Overview


Name	MS001817
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Membrane-anchored ubiquitin-fold protein
Location	scaffold30: 215806 .. 216561 (+)
RNA-Seq Expression	MS001817
Synteny	MS001817

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGAGGACGATTTAATTGACATTAAGTTCAGGCTCTACGATGGCTCTGATATTGGACCCTTTCGATACTCCTCGGCATCCACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCTAAAGGTTGGAGCTTTTCAGTTATAGCTACTCAATTTGTAATTGTTTCTGACATTTAGGTTTCTTTATGTATTTTAACTGCAAACGCGAATGTGAATTTCCGGCGTTTCTGTTGCATGTTATATAGTCTGTTAATCCTTCTTTTTTTAATACTATAGTCTGCTAGCTTAATTTAGCTACTTTTAATGACTAATATATTATTCTTGCCAGACGGCTCTACGCGGATATTTTATTCTTGATTTACGCGCTTATTCACAGAACGCATGTTGAATTCTTTTCATATGTGTCGTTTACTATTAGGAACTTATGCGCGTAGTTTTGGGTTTCTGAAGTAATGTCTTACATTCGCTGGATTTCTTCTCACCATTTTTTTTCTCGGCATTTGTTTTCATATTGATTTTTTCTTTGCCCTTTTTGGACGATTTTTTCTTTCCTTTTTAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGTAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCATCGCAAAAGCTAAAACAGGTGATTTCCTTTCACATTTT

mRNA sequence

ATGCCGGAGGACGATTTAATTGACATTAAGTTCAGGCTCTACGATGGCTCTGATATTGGACCCTTTCGATACTCCTCGGCATCCACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCTAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGTAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCATCGCAAAAGCTAAAACAGGTGATTTCCTTTCACATTTT

Coding sequence (CDS)

ATGCCGGAGGACGATTTAATTGACATTAAGTTCAGGCTCTACGATGGCTCTGATATTGGACCCTTTCGATACTCCTCGGCATCCACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCTAAAGGCAAAACAATCACTCCGAAGGCAGCCAGTGAAGTAAAACTGATAAGTTCTGGTAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACTATAATGCACGTTGTTGTACAGCCATCCATCGCAAAAGCTAAAACAGGTGATTTCCTTTCACATTTT

Protein sequence

MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTGDFLSHF

Homology

[Close]

BLAST of MS001817 vs. NCBI nr
Match: KAA0057753.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 4.8e-51
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTGDF 104
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKTGDF
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTGDF 103

[Close]

BLAST of MS001817 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.1 bits (518), Expect = 5.9e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. NCBI nr
Match: XP_031745197.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745202.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN63460.1 hypothetical protein Csa_013839 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 7.7e-49
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. NCBI nr
Match: XP_022134657.1 (membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134659.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134660.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 100

[Close]

BLAST of MS001817 vs. NCBI nr
Match: XP_022932445.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48
Identity = 95/100 (95.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPKGKT+TPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPKGKTVTPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGV IMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVIIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-43
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPS+AK+KT
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKT 100

[Close]

BLAST of MS001817 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32
Identity = 62/99 (62.63%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK 100
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKAR 99

[Close]

BLAST of MS001817 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 3.5e-28
Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 4   DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGK 63
           D+ +++KFRL+DGSDIGP R ++ A+T+  LK R+V+DWPK KTI PK A++VKLIS GK
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGK 79

Query: 64  ILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK 100
           ILEN+K + QC+ PFG+       MHVVVQPS AK+K
Sbjct: 80  ILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSK 116

[Close]

BLAST of MS001817 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-24
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
          D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK 98
          ENNKTVG C+ P G F+G VT MHV++Q  + +
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTE 98

[Close]

BLAST of MS001817 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-23
Identity = 45/87 (51.72%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 7  IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILEN 66
          I++KFRL+DG+DIGP +Y  ++T+  LK+ I++ WP+ K ITPK  +++KLI++G+ILEN
Sbjct: 8  IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILEN 67

Query: 67 NKTVGQCKLPFGEFTGGVTIMHVVVQP 94
          N+T+ + ++P GE  GGV  MHVVV+P
Sbjct: 68 NRTLAESRVPVGEVPGGVITMHVVVRP 94

[Close]

BLAST of MS001817 vs. ExPASy TrEMBL
Match: A0A5A7UPG7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00340 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-51
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTGDF 104
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKTGDF
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTGDF 103

[Close]

BLAST of MS001817 vs. ExPASy TrEMBL
Match: A0A6J1IG02 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111472981 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. ExPASy TrEMBL
Match: A0A1S3CMX7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. ExPASy TrEMBL
Match: A0A6J1EXB1 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111439129 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. ExPASy TrEMBL
Match: A0A0A0LNH9 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001320 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.7e-49
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKT 100

[Close]

BLAST of MS001817 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein )

HSP 1 Score: 176.8 bits (447), Expect = 9.3e-45
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKT 101
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPS+AK+KT
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKT 100

[Close]

BLAST of MS001817 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor )

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 62/99 (62.63%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAK 100
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKAR 99

[Close]

BLAST of MS001817 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
          D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK 98
          ENNKTVG C+ P G F+G VT MHV++Q  + +
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTE 98

[Close]

BLAST of MS001817 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 5  DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
          D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6  DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65 ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAK 98
          ENNKTVG C+ P G F+G VT MHV++Q  + +
Sbjct: 66 ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTE 98

[Close]

BLAST of MS001817 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-24
Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           M ++DLI++KFRL DG+DIGP +YS   T+  LK++I++ WPK K   PK  +EVKLI+ 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCK--LPFGEFTGGVTIMHVVVQPSIAKAK 100
           GKILENNKT+ + +  +  GE  G VT MHVV++P + + K
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKK 101

The following BLAST results are available for this feature:

BLAST of MS001817 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057753.1	4.8e-51	99.03	membrane-anchored ubiquitin-fold protein 3 [Cucumis melo var. makuwa] >TYJ98433....	[more]
XP_008464397.1	5.9e-49	99.00	PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_0084643...	[more]
XP_031745197.1	7.7e-49	98.00	membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 mem...	[more]
XP_022134657.1	1.3e-48	99.00	membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134...	[more]
XP_022932445.1	6.5e-48	95.00	membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS001817 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW27	1.3e-43	80.00	Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9LSD8	1.8e-32	62.63	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q7XRU4	3.5e-28	58.76	Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8LCS8	2.3e-24	52.69	Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q6Z8K4	3.4e-23	51.72	Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of MS001817 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UPG7	2.3e-51	99.03	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1IG02	2.8e-49	99.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A1S3CMX7	2.8e-49	99.00	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298...	[more]
A0A6J1EXB1	2.8e-49	99.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LNH9	3.7e-49	98.00	Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001...	[more]

BLAST of MS001817 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24990.1	9.3e-45	80.00	Ubiquitin family protein	[more]
AT3G26980.1	1.3e-33	62.63	membrane-anchored ubiquitin-fold protein 4 precursor	[more]
AT5G15460.1	1.7e-25	52.69	membrane-anchored ubiquitin-fold protein 2	[more]
AT5G15460.2	1.7e-25	52.69	membrane-anchored ubiquitin-fold protein 2	[more]
AT1G77870.1	3.1e-24	50.50	membrane-anchored ubiquitin-fold protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 6..100 e-value: 3.1E-37 score: 127.0
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..105 e-value: 2.8E-42 score: 141.4
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 2.4E-41 score: 141.9
None	No IPR available	PANTHER	PTHR13169:SF3	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3	coord: 1..102
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 6..93 e-value: 8.547E-44 score: 135.584
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..102
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..75 score: 10.026781
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001817.1	MS001817.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding