MS001803 (gene) Bitter gourd (TR) v1

Overview


Name	MS001803
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SAM domain-containing protein
Location	scaffold30: 156729 .. 157673 (+)
RNA-Seq Expression	MS001803
Synteny	MS001803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATATTCAGCCACCGGACGCCCAGTTGAACGGCGGACCTGTCCCACTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTATGACTCCTACGCGCGCCGCACCACCAATAAGCCCTGGAAGTTTGCTATGGATAATCGAAAGGACTCTGCTGCCTCTGCCAAAAACTCCAAAACTCGGCCTTTGACCAACTTGAGCTCGGCCGGGGCTGGGGGCGCTGAGTTTCACGAGACCCTAGAGGGCGAGGACAAGGAAAACAATTTAGACAGCGTTGCGATTGGTAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCGGCGGCCACCAAGAGGGTCAGAACTAATTGGGTATCCTCCAAGCACGACGAGGGCGGTGGAGGCGGGGAAGCCGATGAAAAATATAGCGGCGGCGAAGATGTCGATGAGGGGTATCGGGATTACGACGTCGACAACTCGGAAAGTCCCTTAAAAGAACAGAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAAGGGAATGAAAGGGAGGTGCTATATCAGGGGAATAGAAGATCCATCCGGTCTAGGGTTTCGGAGGGGAGGGAGCACCAGGAGGGACTGGAATTTTCAGGGCCTTCGGATACTGATGCGAGGAATTGGAAGTGTGGGACTAGTGGCGATAGGAATGGGAATGGTGGGAGAGGACTATGTGGGGAAGATGGGGTTAGGGTTTGGCTCAACGGTTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGTGCAATTCAGAAGTTAGGGAAGGGATTTTCA

mRNA sequence

ATGGCCGATATTCAGCCACCGGACGCCCAGTTGAACGGCGGACCTGTCCCACTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTATGACTCCTACGCGCGCCGCACCACCAATAAGCCCTGGAAGTTTGCTATGGATAATCGAAAGGACTCTGCTGCCTCTGCCAAAAACTCCAAAACTCGGCCTTTGACCAACTTGAGCTCGGCCGGGGCTGGGGGCGCTGAGTTTCACGAGACCCTAGAGGGCGAGGACAAGGAAAACAATTTAGACAGCGTTGCGATTGGTAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCGGCGGCCACCAAGAGGGTCAGAACTAATTGGGTATCCTCCAAGCACGACGAGGGCGGTGGAGGCGGGGAAGCCGATGAAAAATATAGCGGCGGCGAAGATGTCGATGAGGGGTATCGGGATTACGACGTCGACAACTCGGAAAGTCCCTTAAAAGAACAGAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAAGGGAATGAAAGGGAGGTGCTATATCAGGGGAATAGAAGATCCATCCGGTCTAGGGTTTCGGAGGGGAGGGAGCACCAGGAGGGACTGGAATTTTCAGGGCCTTCGGATACTGATGCGAGGAATTGGAAGTGTGGGACTAGTGGCGATAGGAATGGGAATGGTGGGAGAGGACTATGTGGGGAAGATGGGGTTAGGGTTTGGCTCAACGGTTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGTGCAATTCAGAAGTTAGGGAAGGGATTTTCA

Coding sequence (CDS)

ATGGCCGATATTCAGCCACCGGACGCCCAGTTGAACGGCGGACCTGTCCCACTCGTCGTCTCCTCCGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTATGACTCCTACGCGCGCCGCACCACCAATAAGCCCTGGAAGTTTGCTATGGATAATCGAAAGGACTCTGCTGCCTCTGCCAAAAACTCCAAAACTCGGCCTTTGACCAACTTGAGCTCGGCCGGGGCTGGGGGCGCTGAGTTTCACGAGACCCTAGAGGGCGAGGACAAGGAAAACAATTTAGACAGCGTTGCGATTGGTAGTTGGAGATTAAAGGATTCCAAGCGGAGAGGCTCGGCGGCCACCAAGAGGGTCAGAACTAATTGGGTATCCTCCAAGCACGACGAGGGCGGTGGAGGCGGGGAAGCCGATGAAAAATATAGCGGCGGCGAAGATGTCGATGAGGGGTATCGGGATTACGACGTCGACAACTCGGAAAGTCCCTTAAAAGAACAGAGCTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAAGGGAATGAAAGGGAGGTGCTATATCAGGGGAATAGAAGATCCATCCGGTCTAGGGTTTCGGAGGGGAGGGAGCACCAGGAGGGACTGGAATTTTCAGGGCCTTCGGATACTGATGCGAGGAATTGGAAGTGTGGGACTAGTGGCGATAGGAATGGGAATGGTGGGAGAGGACTATGTGGGGAAGATGGGGTTAGGGTTTGGCTCAACGGTTTAGGGTTAGGTCGGTATGCTCCAGTTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGTGCAATTCAGAAGTTAGGGAAGGGATTTTCA

Protein sequence

MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKFAMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSKRRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDYDVDNSESPLKEQSSMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS

Homology

[Close]

BLAST of MS001803 vs. NCBI nr
Match: XP_022134986.1 (uncharacterized protein LOC111007101 [Momordica charantia])

HSP 1 Score: 610.9 bits (1574), Expect = 6.1e-171
Identity = 311/315 (98.73%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF
Sbjct: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
           AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLE EDKENNLDSVAIGSWRLKDSK
Sbjct: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLECEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDY  DNSESPLKEQSSM
Sbjct: 121 RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDY--DNSESPLKEQSSM 180

Query: 181 HSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEGQGNERE+LYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNEREMLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300
           RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYCAIQKLGKGFS 316
           RKMYCAIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 313

[Close]

BLAST of MS001803 vs. NCBI nr
Match: KAG6587390.1 (Protein bicaudal C-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021373.1 Protein bicaudal C-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 562.4 bits (1448), Expect = 2.5e-156
Identity = 285/317 (89.91%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETVDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGNGGRG+CGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNGGRGVCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. NCBI nr
Match: XP_023530915.1 (uncharacterized protein LOC111793312 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.6 bits (1446), Expect = 4.3e-156
Identity = 284/317 (89.59%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETIDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGNGGRG+CGEDGVR+WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNGGRGVCGEDGVRLWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. NCBI nr
Match: XP_023005045.1 (uncharacterized protein LOC111498152 [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 5.6e-156
Identity = 284/317 (89.59%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSS+TVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSDTVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETVDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGNGGRG+CGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNGGRGVCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. NCBI nr
Match: XP_022928880.1 (uncharacterized protein LOC111435660 [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155
Identity = 284/317 (89.59%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETVDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGN GRG+CGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNSGRGVCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. ExPASy Swiss-Prot
Match: Q9IA00 (Protein bicaudal C homolog 1-A OS=Xenopus laevis OX=8355 GN=bicc1-a PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 262 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGK 313
           LGLG+Y  +F+  E+D +    LT +DLK++GIS  G+RRKM  AI +L K
Sbjct: 874 LGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGISTFGARRKMLLAISELNK 924

[Close]

BLAST of MS001803 vs. ExPASy Swiss-Prot
Match: Q9H694 (Protein bicaudal C homolog 1 OS=Homo sapiens OX=9606 GN=BICC1 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 262 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGK 313
           LGLG+Y  VF+  E+D +    LT +DLK++GI+  G+RRKM  AI +L K
Sbjct: 885 LGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 935

[Close]

BLAST of MS001803 vs. ExPASy Swiss-Prot
Match: Q99MQ1 (Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 262 LGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGK 313
           LGLG+Y  VF+  E+D +    LT +DLK++GI+  G+RRKM  AI +L K
Sbjct: 887 LGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSK 937

[Close]

BLAST of MS001803 vs. ExPASy Swiss-Prot
Match: Q24009 (Protein bicaudal C OS=Drosophila melanogaster OX=7227 GN=BicC PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 3.2e-05
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0


Query: 255 VRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKL 311
           ++  L  LGL  Y  +F ++E+D EV   LT E+L ++GI+A G+R+K+  AI  L
Sbjct: 810 IQTLLTSLGLEHYIKIFVLNEIDLEVFTTLTEENLMELGIAAFGARKKLLTAIHTL 865

[Close]

BLAST of MS001803 vs. ExPASy Swiss-Prot
Match: Q68DC2 (Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKS6 PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.2e-04
Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0


Query: 238 SGDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAV 297
           S    G+    +  ED +   L  L L +Y P+FE  EVD E    LT  DLK++GI   
Sbjct: 761 SKSSGGSSSGTITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTD 820

Query: 298 GSRRKMYCAIQKLGKG 314
           GSR+++  AI +L  G
Sbjct: 821 GSRQQILAAISELNAG 836

[Close]

BLAST of MS001803 vs. ExPASy TrEMBL
Match: A0A6J1BZB7 (uncharacterized protein LOC111007101 OS=Momordica charantia OX=3673 GN=LOC111007101 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 3.0e-171
Identity = 311/315 (98.73%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF
Sbjct: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
           AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLE EDKENNLDSVAIGSWRLKDSK
Sbjct: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLECEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDYDVDNSESPLKEQSSM 180
           RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDY  DNSESPLKEQSSM
Sbjct: 121 RRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDY--DNSESPLKEQSSM 180

Query: 181 HSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD 240
           HSLENLAMEGQGNERE+LYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD
Sbjct: 181 HSLENLAMEGQGNEREMLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGD 240

Query: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300
           RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR
Sbjct: 241 RNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSR 300

Query: 301 RKMYCAIQKLGKGFS 316
           RKMYCAIQKLGKGFS
Sbjct: 301 RKMYCAIQKLGKGFS 313

[Close]

BLAST of MS001803 vs. ExPASy TrEMBL
Match: A0A6J1KWB3 (uncharacterized protein LOC111498152 OS=Cucurbita maxima OX=3661 GN=LOC111498152 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.7e-156
Identity = 284/317 (89.59%), Postives = 300/317 (94.64%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSS+TVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSDTVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETVDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGNGGRG+CGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNGGRGVCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. ExPASy TrEMBL
Match: A0A6J1ESR5 (uncharacterized protein LOC111435660 OS=Cucurbita moschata OX=3662 GN=LOC111435660 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 6.0e-156
Identity = 284/317 (89.59%), Postives = 299/317 (94.32%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MAD+QPPDAQ+NGGP PLVVSSETVGSKRQRRPSVRLGDIGGDQPYDS+ARR TNKPWKF
Sbjct: 1   MADVQPPDAQMNGGPAPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSHARR-TNKPWKF 60

Query: 61  AMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDSK 120
            ++NRKD+A SAKNSKTRPLTNLSSAG    EF ET++GEDKENNLDSVAIGSWRLKDSK
Sbjct: 61  GLENRKDAAVSAKNSKTRPLTNLSSAG----EFQETVDGEDKENNLDSVAIGSWRLKDSK 120

Query: 121 RRGSAATKRVRTNWVSSKHDEGGGGG--EADEKYSGGEDVDEGYRDYDVDNSESPLKEQS 180
           RR SA TKRVRTNWVSSKHDEGGGGG  E DEKYSGGEDVDEGYRDY+++NSESPLKEQS
Sbjct: 121 RRASAGTKRVRTNWVSSKHDEGGGGGEREGDEKYSGGEDVDEGYRDYEIENSESPLKEQS 180

Query: 181 SMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTS 240
           SMHSLENL +EGQGNERE+LYQGNRR IRSRVSEGRE QEGLEFSGPSDTDARNWKCGTS
Sbjct: 181 SMHSLENLGIEGQGNEREMLYQGNRRCIRSRVSEGREQQEGLEFSGPSDTDARNWKCGTS 240

Query: 241 GDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVG 300
           GDRNGN GRG+CGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVG
Sbjct: 241 GDRNGNSGRGVCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVG 300

Query: 301 SRRKMYCAIQKLGKGFS 316
           SRRKMYCAIQKLGKGFS
Sbjct: 301 SRRKMYCAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. ExPASy TrEMBL
Match: A0A6J1E4E0 (protein bicaudal C homolog 1-A-like OS=Cucurbita moschata OX=3662 GN=LOC111429827 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155
Identity = 289/316 (91.46%), Postives = 297/316 (93.99%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MADIQPPD Q+NG P P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARR TNKPWKF
Sbjct: 1   MADIQPPDPQINGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARR-TNKPWKF 60

Query: 61  AMDNRKD-SAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDS 120
           A DNRKD SAASAKNSKTRPLTNL SAG GGAEF ET EGEDKENNLDSVAIGSWRLKDS
Sbjct: 61  ASDNRKDSSAASAKNSKTRPLTNLRSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120

Query: 121 KRRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDYDVDNSESPLKEQSS 180
           KRRGSAATKRVRTNWVS KHDEGGGGGEADEKYS GEDV+EGYRDYDVDNSESPLKEQSS
Sbjct: 121 KRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVDNSESPLKEQSS 180

Query: 181 MHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSG 240
           MHSLENLAMEG+G ERE+LYQGNRR IRSRVSEGREHQ+GLEFSGPSDTDARNWKCGTSG
Sbjct: 181 MHSLENLAMEGEGKEREMLYQGNRRCIRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSG 240

Query: 241 DRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGS 300
           DRNGNGGRG+   DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVGS
Sbjct: 241 DRNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGS 300

Query: 301 RRKMYCAIQKLGKGFS 316
           RRKMY A+QKLGKGFS
Sbjct: 301 RRKMYSAVQKLGKGFS 312

[Close]

BLAST of MS001803 vs. ExPASy TrEMBL
Match: A0A6J1JDY9 (ankyrin repeat and SAM domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484940 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 288/316 (91.14%), Postives = 296/316 (93.67%), Query Frame = 0


Query: 1   MADIQPPDAQLNGGPVPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARRTTNKPWKF 60
           MADIQPPD Q NG P P VVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARR TNKPWKF
Sbjct: 1   MADIQPPDPQTNGAPAPPVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYARR-TNKPWKF 60

Query: 61  AMDNRKD-SAASAKNSKTRPLTNLSSAGAGGAEFHETLEGEDKENNLDSVAIGSWRLKDS 120
           A DNRKD SAASAKNSKTRPLTNLSSAG GGAEF ET EGEDKENNLDSVAIGSWRLKDS
Sbjct: 61  ASDNRKDSSAASAKNSKTRPLTNLSSAGGGGAEFRETPEGEDKENNLDSVAIGSWRLKDS 120

Query: 121 KRRGSAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVDEGYRDYDVDNSESPLKEQSS 180
           KRRGSAATKRVRTNWVS KHDEGGGGGEADEKYS GEDV+EGYRDYDV+NSESPLKEQSS
Sbjct: 121 KRRGSAATKRVRTNWVSPKHDEGGGGGEADEKYSAGEDVEEGYRDYDVENSESPLKEQSS 180

Query: 181 MHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSG 240
           MHSLENLA+EG+G ERE+LYQGNRR  RSRVSEGREHQ+GLEFSGPSDTDARNWKCGTSG
Sbjct: 181 MHSLENLAIEGEGKEREMLYQGNRRCTRSRVSEGREHQDGLEFSGPSDTDARNWKCGTSG 240

Query: 241 DRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGS 300
           DRNGNGGRG+   DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGI+AVGS
Sbjct: 241 DRNGNGGRGV---DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGITAVGS 300

Query: 301 RRKMYCAIQKLGKGFS 316
           RRKMY AIQKLGKGFS
Sbjct: 301 RRKMYSAIQKLGKGFS 312

[Close]

BLAST of MS001803 vs. TAIR 10
Match: AT3G48800.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 215.7 bits (548), Expect = 5.3e-56
Identity = 155/336 (46.13%), Postives = 199/336 (59.23%), Query Frame = 0


Query: 1   MADIQPPDA-QLNGGPVPLVVSSE-------TVGSKRQRRPSVRLGDIGGDQ-------- 60
           MA++QP D  Q NGG V +  S+          GSKR RRPSVRLG+IGGDQ        
Sbjct: 1   MAELQPVDGQQTNGGVVTIPASTSAEATAIAAAGSKRLRRPSVRLGEIGGDQYQQQHHHH 60

Query: 61  ----PYDSYARRTTNKPWKFAMDNRKDSAASAKNSKTRPLTNLSSAGAGGAEFHETLEGE 120
                YDS  R++   P      NRKD   ++K+S+TR LTNLSS    G E   TL+ +
Sbjct: 61  AAAAAYDSQGRKSKWTP-TTTSGNRKD---TSKSSRTRTLTNLSS----GYENIGTLD-D 120

Query: 121 DKENNLDSVAIGSWRLKDSKRRG-SAATKRVRTNWVSSKHDEGGGGGEADEKYSGGEDVD 180
           ++E N+DS  +GSWR+K  KR G SAA KRVR+NWVS         G+ DEK SGGE+++
Sbjct: 121 EREGNVDSFGVGSWRVK--KRVGSSAAAKRVRSNWVSKV-------GDGDEKISGGEELE 180

Query: 181 EGYRDYDVDNSESPLKEQSSMHSLENLAMEGQGNEREVLYQGNRRSIRSRVSEGREHQEG 240
            G+RD+  ++SESP+KE       E+L  +G G      + G RR   +  S  RE +  
Sbjct: 181 GGFRDFSREDSESPIKE-------ESLDRDGGG------FYGRRRYESNNSSGNREFES- 240

Query: 241 LEFSGPSDTDARNWKCGTSGDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPVFEIHEVDDE 300
                                 N +GG    G++GV++WL  LGLGRY P+FEIHEVD+E
Sbjct: 241 ----------------------NMDGG----GKEGVKIWLQELGLGRYWPMFEIHEVDEE 278

Query: 301 VLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS 316
           VLP+LTLEDLKDMGI+AVGSRRKM+CAIQKLG+ FS
Sbjct: 301 VLPLLTLEDLKDMGINAVGSRRKMFCAIQKLGREFS 278

[Close]

BLAST of MS001803 vs. TAIR 10
Match: AT5G23680.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 169.1 bits (427), Expect = 5.7e-42
Identity = 142/363 (39.12%), Postives = 189/363 (52.07%), Query Frame = 0


Query: 1   MADIQPPDA-QLNGGPVPLVV------------SSETVGSKRQRRPSVRLGDIGGDQ--- 60
           MA++Q  +  Q+NGG +P  +            +  +VGSKR RRPSVRLGDIGGDQ   
Sbjct: 1   MAELQLVEGHQINGGFIPPAIINSIEAPETSAAAGVSVGSKRLRRPSVRLGDIGGDQYHQ 60

Query: 61  ----PYDS-YARRTTNKP---WKFAMDNRKD----SAASAKNSKTRPLTNLSSAGAGGAE 120
                YDS   RR   +P         NRK+    S  +  +S+TR +TNLSS   GG E
Sbjct: 61  HVVAAYDSPQVRRPKWRPSGGGGGGGGNRKEPNNQSGKTTSSSRTRTMTNLSS---GGYE 120

Query: 121 FHETLEGEDKENNLDSVAIGSWRLKD-----------SKRRGSAATKRVRTNWVSSKHDE 180
              TL+        D V+IGSWR+K            +    +A+ KRVR+NW +     
Sbjct: 121 NTGTLDE-------DPVSIGSWRVKKWVKSSGGETAATTTTNTASAKRVRSNWAT----R 180

Query: 181 GGGGGEADEKYSGGEDV---------DEGYRDYDVDNSESPLKEQSSMHSLENLAMEGQG 240
             G  + DEK+SG E+          +EG+RD+  ++SESP+KE+               
Sbjct: 181 NDGVEQGDEKFSGEEEEEEEDEELGGEEGFRDFSREDSESPMKER--------------- 240

Query: 241 NEREVLYQGNRRSIRSRVSEGREHQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGLCGE 300
                           R  E RE    +E  G       +W+         +GGR   G+
Sbjct: 241 ----------------RRYENRE----VELLG-------DWQ---------SGGR---GK 295

Query: 301 DGVRVWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGK 316
           +GV++WL  LGLGRY P+FE+HEVD++VLP+LTLEDLKDMGI+AVGSRRKMYCAIQKLG+
Sbjct: 301 EGVKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAIQKLGR 295

[Close]

BLAST of MS001803 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 23/58 (39.66%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 258 WLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS 316
           WL  LGL +Y  VF   E+D + L  LT EDL  +GI+++G R+K+  A+  +   F+
Sbjct: 247 WLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDPFA 304

The following BLAST results are available for this feature:

BLAST of MS001803 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134986.1	6.1e-171	98.73	uncharacterized protein LOC111007101 [Momordica charantia]	[more]
KAG6587390.1	2.5e-156	89.91	Protein bicaudal C-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_023530915.1	4.3e-156	89.59	uncharacterized protein LOC111793312 [Cucurbita pepo subsp. pepo]	[more]
XP_023005045.1	5.6e-156	89.59	uncharacterized protein LOC111498152 [Cucurbita maxima]	[more]
XP_022928880.1	1.2e-155	89.59	uncharacterized protein LOC111435660 [Cucurbita moschata]	[more]

BLAST of MS001803 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9IA00	2.2e-06	49.02	Protein bicaudal C homolog 1-A OS=Xenopus laevis OX=8355 GN=bicc1-a PE=2 SV=1	[more]
Q9H694	3.8e-06	49.02	Protein bicaudal C homolog 1 OS=Homo sapiens OX=9606 GN=BICC1 PE=1 SV=2	[more]
Q99MQ1	3.8e-06	49.02	Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1	[more]
Q24009	3.2e-05	41.07	Protein bicaudal C OS=Drosophila melanogaster OX=7227 GN=BicC PE=1 SV=2	[more]
Q68DC2	1.2e-04	38.16	Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=AN...	[more]

BLAST of MS001803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZB7	3.0e-171	98.73	uncharacterized protein LOC111007101 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1KWB3	2.7e-156	89.59	uncharacterized protein LOC111498152 OS=Cucurbita maxima OX=3661 GN=LOC111498152...	[more]
A0A6J1ESR5	6.0e-156	89.59	uncharacterized protein LOC111435660 OS=Cucurbita moschata OX=3662 GN=LOC1114356...	[more]
A0A6J1E4E0	1.0e-155	91.46	protein bicaudal C homolog 1-A-like OS=Cucurbita moschata OX=3662 GN=LOC11142982...	[more]
A0A6J1JDY9	1.5e-154	91.14	ankyrin repeat and SAM domain-containing protein 3-like OS=Cucurbita maxima OX=3...	[more]

BLAST of MS001803 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48800.1	5.3e-56	46.13	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G23680.1	5.7e-42	39.12	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G45700.1	1.9e-05	39.66	sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 247..313 e-value: 1.4E-12 score: 57.8
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 254..310 e-value: 6.1E-13 score: 49.0
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 253..313 score: 14.702396
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 249..310 e-value: 1.4E-18 score: 68.8
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 251..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..163
None	No IPR available	PANTHER	PTHR10627	SCP160	coord: 20..315
None	No IPR available	PANTHER	PTHR10627:SF75	SUBFAMILY NOT NAMED	coord: 20..315
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 255..309 e-value: 4.73517E-17 score: 71.8869

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001803.1	MS001803.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding