MS001647 (gene) Bitter gourd (TR) v1

Overview
NameMS001647
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold377: 408441 .. 408587 (+)
RNA-Seq ExpressionMS001647
SyntenyMS001647
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATACCAGCACAGCAACATGGTTGCACAGCGGCGAAGAAGGTAAATTCTGGCTCTCTGCTGCTTCATCAAAGCTCCACACTTGGAGCTAAGCCTATGGCTCTGGCTCTTCATCTTCTCAGATTTTGTTTTGGGAACCAATTT

mRNA sequence

ATGAATATACCAGCACAGCAACATGGTTGCACAGCGGCGAAGAAGGTAAATTCTGGCTCTCTGCTGCTTCATCAAAGCTCCACACTTGGAGCTAAGCCTATGGCTCTGGCTCTTCATCTTCTCAGATTTTGTTTTGGGAACCAATTT

Coding sequence (CDS)

ATGAATATACCAGCACAGCAACATGGTTGCACAGCGGCGAAGAAGGTAAATTCTGGCTCTCTGCTGCTTCATCAAAGCTCCACACTTGGAGCTAAGCCTATGGCTCTGGCTCTTCATCTTCTCAGATTTTGTTTTGGGAACCAATTT

Protein sequence

MNIPAQQHGCTAAKKVNSGSLLLHQSSTLGAKPMALALHLLRFCFGNQF
Homology
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BLAST of MS001647 vs. ExPASy TrEMBL
Match: A0A0A0KYY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012520 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-04
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0 

Query: 1  MNIPAQQHGCTAAKKVNSGSLLLHQSSTLGAK--PMALALHLLRFCFGNQF 50
          MNI  +Q GCTAA++VNS SLLL+QSSTL  K  PMA+ALH L    G+ +
Sbjct: 1  MNIGTKQDGCTAAEEVNSASLLLYQSSTLRTKLMPMAMALHHLFLSHGSNY 51

The following BLAST results are available for this feature:
BLAST of MS001647 vs.
Match NameE-valueIdentityDescription
BLAST of MS001647 vs.
Match NameE-valueIdentityDescription
BLAST of MS001647 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYY71.3e-0458.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012520 PE=4 SV=1[more]
BLAST of MS001647 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001647.1MS001647.1mRNA