MS001634 (gene) Bitter gourd (TR) v1

Overview
NameMS001634
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMajor facilitator superfamily protein
Locationscaffold377: 114571 .. 114755 (-)
RNA-Seq ExpressionMS001634
SyntenyMS001634
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCGAGGGAGACATTTCTGCTAGAGAAGCGGTCTGCGGAGCGAAGCGTAACGGTGTGTGTGAATTTGTTGTTATTGTATTCGTGATTGCGCAAGCCACTCTCAATGCTTTGCTATTTCAAGTTTGGGATCTTTCTCTTTTCTTCGGTCGGGTTCTTTTCATGTTTGTATTCGCCTTGTTTCTA

mRNA sequence

ATTTCGAGGGAGACATTTCTGCTAGAGAAGCGGTCTGCGGAGCGAAGCGTAACGGTGTGTGTGAATTTGTTGTTATTCGTGATTGCGCAAGCCACTCTCAATGCTTTGCTATTTCAAGTTTGGGATCTTTCTCTTTTCTTCGGTCGGGTTCTTTTCATGTTTGTATTCGCCTTGTTTCTA

Coding sequence (CDS)

ATTTCGAGGGAGACATTTCTGCTAGAGAAGCGGTCTGCGGAGCGAAGCGTAACGGTGTGTGTGAATTTGTTGTTATTCGTGATTGCGCAAGCCACTCTCAATGCTTTGCTATTTCAAGTTTGGGATCTTTCTCTTTTCTTCGGTCGGGTTCTTTTCATGTTTGTATTCGCCTTGTTTCTA

Protein sequence

ISRETFLLEKRSAERSVTVCVNLLLFVIAQATLNALLFQVWDLSLFFGRVLFMFVFALFL
Homology
[Close]
BLAST of MS001634 vs. TAIR 10
Match: AT5G26340.1 (Major facilitator superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 9.0e-05
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0 

Query: 1   ISRETFLLEKRSAERSVTVCVNLLL-FVIAQATLNALLFQVWDLSLFFGR-VLFMFVFAL 60
           I  ETF LE RSA +SVTVCVNLL  F+IAQA L+ L    + + +FF   VL M VF +
Sbjct: 411 IPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVFVM 470

The following BLAST results are available for this feature:
BLAST of MS001634 vs.
Match NameE-valueIdentityDescription
BLAST of MS001634 vs.
Match NameE-valueIdentityDescription
BLAST of MS001634 vs.
Match NameE-valueIdentityDescription
BLAST of MS001634 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G26340.19.0e-0554.84Major facilitator superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001634.1MS001634.1mRNA