MS001477 (gene) Bitter gourd (TR) v1

Overview


Name	MS001477
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	scaffold36: 4495235 .. 4496386 (-)
RNA-Seq Expression	MS001477
Synteny	MS001477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCTCTCTACTACGTAGTTACAACCTCGCTCGTTCAGATCGATCAGCTTTTGTTCATTGGAGGAGATTGCTTTCTTCCGACTCCTTGGTGGAGTTCAAGCCAGCGGAGATCGGGATAGTCTCCGGTATCCCCGAAAACCACCTCCGTCGTCGGGTATGCATTTCTAATTTTCAAGTGATCTATTTTGTTGCTCTCTGTTTAGTTTTGTTTCAGATAAATTGGACGAAATTTTTTTACTCCCGCAGTTCTGTTGTATGGTTGATTTTCAAAGGAAGAACCAAATATAACTGTCAGGTTAGAGATACAAGTACAATCTCTAATCAGGTTTAGCTCCATTTAGGGATAAGATGGAAAATGGTCCTTTCTACTGGAAATTTTTGCTGCATGAACGTTAATCATGGTGGATTTGTGGAATTATTATCAGTATGTGAACTTATGGAGGAACTGATTCATTGTCTGCCTTTATGCATTGCAGGTTATTATCTACTCACCTGCTAGAACCGCCACGCAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCCACACACAAGTAGGATTTCTTCAATTGCATAGCCCGGACTGACTCTTCTATTCTTTTAATCTTTGTCATTTATCAATAGATGCATATTTTTATCTTATTTTCGTTTTCATGCCTTGTTCGTAGTTTAAATACGATTAATAATATGGTCATTTACCATTTTTCTTAGAGGCAAGTCATTCTTCTAGTCCATATTTAGAAACTAAAACAGAGTGTGAAGTCATGAACATCTGAGAACTGGCAAATCCATGTAAAAATTAATTTTCTTGGCGTTTATCTTGCTTTTGGACTCCTCAATTTGATTTTAGTTTTGTTTTTATGTATTTTCAAGATGTTGAAATTGAAGTTGAAGCAATTATTAACTAGATAGCGGGCTGAAAAGTGGTTTCCATTTTCTTTAGTGCACAAGTATATTAGATATCGTGAATTGAGGCTTCACCTCCCTTCCTCCATTTGCTTAGGTGGGAAAACCCCCTGATGGGATGGACGTCCACAGGAGACCCATATGCCAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGGCATTTGCTGAAAAGCACGGTTGGCAATACGAGGTT

mRNA sequence

ATGGCGAGCTCTCTACTACGTAGTTACAACCTCGCTCGTTCAGATCGATCAGCTTTTGTTCATTGGAGGAGATTGCTTTCTTCCGACTCCTTGGTGGAGTTCAAGCCAGCGGAGATCGGGATAGTCTCCGGTATCCCCGAAAACCACCTCCGTCGTCGGGTTATTATCTACTCACCTGCTAGAACCGCCACGCAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCCACACACAAGTGGGAAAACCCCCTGATGGGATGGACGTCCACAGGAGACCCATATGCCAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGGCATTTGCTGAAAAGCACGGTTGGCAATACGAGGTT

Coding sequence (CDS)

ATGGCGAGCTCTCTACTACGTAGTTACAACCTCGCTCGTTCAGATCGATCAGCTTTTGTTCATTGGAGGAGATTGCTTTCTTCCGACTCCTTGGTGGAGTTCAAGCCAGCGGAGATCGGGATAGTCTCCGGTATCCCCGAAAACCACCTCCGTCGTCGGGTTATTATCTACTCACCTGCTAGAACCGCCACGCAGCAAGGCTCTGGGAAAGTTGGGAAATGGAAGATTAATTTTCTCTCCACACACAAGTGGGAAAACCCCCTGATGGGATGGACGTCCACAGGAGACCCATATGCCAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGGCATTTGCTGAAAAGCACGGTTGGCAATACGAGGTT

Protein sequence

MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEKHGWQYEV

Homology

[Close]

BLAST of MS001477 vs. NCBI nr
Match: XP_022131424.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 3.7e-66
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. NCBI nr
Match: XP_038884729.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57
Identity = 113/127 (88.98%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+SLL  YN  RS  SAFVH  RLLSSDSLVEFKP EIG+VSGIPE H+RRRVIIYSPA
Sbjct: 1   MANSLLGRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGMVSGIPEEHIRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. NCBI nr
Match: KAA0060960.1 (NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+SLLR YN  RS  SAFVH  RLLSSDSLVEFKP EIG+ SGIPE HL RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. NCBI nr
Match: XP_008444538.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 4.5e-56
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+SLLR YN  RS  SAFVH  RLLSSDSLVEFKP E+G+ SGIPE HL RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. NCBI nr
Match: XP_004142898.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN62438.1 hypothetical protein Csa_018679 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 111/127 (87.40%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+ LL  YN  RS  SAFVH  RLLSSDSLVE KP EIGI SGIPE HL RRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.6e-41
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPAEIGIVSGIPENHLRRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K  EIG VSGIPE HL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA +FAE+HGW Y+V
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKV 127

[Close]

BLAST of MS001477 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 24  RLLSSDSLVEFKPAEIGIVSGIPENHLR-RRVIIYSPARTATQQGSGKVGKWKINFLSTH 83
           +L++ D  ++  P     ++G+PE H++ R+V I+ PAR   Q G     KWK+ F +  
Sbjct: 51  QLITVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRE 110

Query: 84  KWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
           +WENPLMGW ST DP +N+    L+F + E A+AFAEKHGW Y+V
Sbjct: 111 RWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDV 147

[Close]

BLAST of MS001477 vs. ExPASy Swiss-Prot
Match: Q9CXZ1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 38  EIGIVSGIPENHLR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PE H++ R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
           P +N+    L+F + E A+AFAEK+GW Y+V
Sbjct: 120 PLSNM---VLTFSAKEDAIAFAEKNGWSYDV 147

[Close]

BLAST of MS001477 vs. ExPASy Swiss-Prot
Match: Q02375 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.3e-18
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 38  EIGIVSGIPENHLR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PE H++ R+  I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTITGVPEEHIKTRKARIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
           P +N+    L+F + E A+AFAEK+GW Y+V
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSYDV 147

[Close]

BLAST of MS001477 vs. ExPASy Swiss-Prot
Match: Q66XS7 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko japonicus OX=146911 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 38  EIGIVSGIPENHLR-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I  ++G+PE H++ R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW+ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWSSTAD 119

Query: 98  PYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
           P +N+    L+F + E A+AFAEK+GW ++V
Sbjct: 120 PLSNL---VLTFSTKEDAVAFAEKNGWSFDV 147

[Close]

BLAST of MS001477 vs. ExPASy TrEMBL
Match: A0A6J1BQ75 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004639 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66
Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. ExPASy TrEMBL
Match: A0A5A7V0V4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00940 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 110/127 (86.61%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+SLLR YN  RS  SAFVH  RLLSSDSLVEFKP EIG+ SGIPE HL RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. ExPASy TrEMBL
Match: A0A1S3BAL3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487828 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+SLLR YN  RS  SAFVH  RLLSSDSLVEFKP E+G+ SGIPE HL RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. ExPASy TrEMBL
Match: A0A0A0LKZ2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_2G354640 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.3e-56
Identity = 111/127 (87.40%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MA+ LL  YN  RS  SAFVH  RLLSSDSLVE KP EIGI SGIPE HL RRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEV 128
           HGWQYEV
Sbjct: 121 HGWQYEV 127

[Close]

BLAST of MS001477 vs. ExPASy TrEMBL
Match: A0A6P9F5Z9 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans regia OX=51240 GN=LOC109008146 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 103/127 (81.10%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRVIIYSPA 60
           MASSL RS N+AR+ RSAFV   R LSS++LVE KP+E+G+VSGIPE HLRRRVIIYSPA
Sbjct: 1   MASSLQRSLNIARAYRSAFVPATRSLSSEALVELKPSEVGMVSGIPEEHLRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120
           RTATQQGSGKVG+WKINFLST KWENPLMGWTSTGDPYANVG+A LSFDS EAA AFAEK
Sbjct: 61  RTATQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYANVGEAGLSFDSEEAAKAFAEK 120

Query: 121 HGWQYEV 128
           HGW+Y V
Sbjct: 121 HGWEYVV 127

[Close]

BLAST of MS001477 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 168.3 bits (425), Expect = 3.9e-42
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 24  RLLSSDSLVE--FKPAEIGIVSGIPENHLRRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE  +K  EIG VSGIPE HL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEKHGWQYEV 128
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA +FAE+HGW Y+V
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKV 127

The following BLAST results are available for this feature:

BLAST of MS001477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131424.1	3.7e-66	99.21	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momor...	[more]
XP_038884729.1	3.1e-57	88.98	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benin...	[more]
KAA0060960.1	3.4e-56	86.61	NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa]	[more]
XP_008444538.1	4.5e-56	85.83	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-...	[more]
XP_004142898.1	1.7e-55	87.40	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sa...	[more]

BLAST of MS001477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	5.6e-41	74.53	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	2.1e-19	43.81	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q9CXZ1	1.3e-18	47.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musc...	[more]
Q02375	2.3e-18	46.15	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taur...	[more]
Q66XS7	3.0e-18	46.15	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gekko ja...	[more]

BLAST of MS001477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQ75	1.8e-66	99.21	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]
A0A5A7V0V4	1.7e-56	86.61	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A1S3BAL3	2.2e-56	85.83	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A0A0LKZ2	8.3e-56	87.40	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A6P9F5Z9	1.6e-51	81.10	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Juglans ...	[more]

BLAST of MS001477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	3.9e-42	74.53	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 1.8E-35 score: 122.7
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..127 e-value: 8.4E-27 score: 93.3
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 9..127
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 9..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001477.1	MS001477.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H