MS001465 (gene) Bitter gourd (TR) v1

Overview
NameMS001465
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold36: 4401584 .. 4401739 (-)
RNA-Seq ExpressionMS001465
SyntenyMS001465
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCAGTTTTTGGACTTCAAATTTTGGTTCCCGATCATTGAATCGTGCTGCATTCAGTCGGTTCTTGTCAGCGTCTTGATTTTCGATACATTTGCATTCTTGGAGACAGCAATGATTAGTTATGTTTTGCTCGATGCTGTGATGGATCGTGATCGC

mRNA sequence

ATTCAGTTTTTGGACTTCAAATTTTGGTTCCCGATCATTGAATCGTGCTGCATTCAGTCGGTTCTTGTCAGCGTCTTGATTTTCGATACATTTGCATTCTTGGAGACAGCAATGATTAGTTATGTTTTGCTCGATGCTGTGATGGATCGTGATCGC

Coding sequence (CDS)

ATTCAGTTTTTGGACTTCAAATTTTGGTTCCCGATCATTGAATCGTGCTGCATTCAGTCGGTTCTTGTCAGCGTCTTGATTTTCGATACATTTGCATTCTTGGAGACAGCAATGATTAGTTATGTTTTGCTCGATGCTGTGATGGATCGTGATCGC

Protein sequence

IQFLDFKFWFPIIESCCIQSVLVSVLIFDTFAFLETAMISYVLLDAVMDRDR
Homology
[Close]
BLAST of MS001465 vs. ExPASy TrEMBL
Match: A0A0A0LKJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354070 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-04
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 1  IQFLDFKFWFPIIESCCIQSVLVSVLI----FDTFAFLETAMISYVLLDAVMDRDR 53
          +QFL FKF FPII+SCCIQ  LV  L     F TF F   A I+Y+LLD V++RDR
Sbjct: 38 LQFLRFKFLFPIIKSCCIQLFLVKELADHLNFHTFTF-AFAAITYILLDIVINRDR 92

The following BLAST results are available for this feature:
BLAST of MS001465 vs.
Match NameE-valueIdentityDescription
BLAST of MS001465 vs.
Match NameE-valueIdentityDescription
BLAST of MS001465 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKJ15.1e-0457.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354070 PE=4 SV=1[more]
BLAST of MS001465 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001465.1MS001465.1mRNA