MS001451 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCTGCGGCGGAAAGCTGTGCATGCTCTGTGTCTGCCTGATCGCGGTCGCCGTCGCCGTCGGATTGCTCTTCGGATTCGGAGTTTTGAAGGACGGCTTCCACAAGATCAAAGATAAAGTTGATTTCTGCGATGGACCTCTGTGCGGCGGCGGCTCCTCATTTCTAGGTTTTCTCTTCCGTAGATCTCCACTTTCTTTC ATGTGCTGCGGCGGAAAGCTGTGCATGCTCTGTGTCTGCCTGATCGCGGTCGCCGTCGCCGTCGGATTGCTCTTCGGATTCGGAGTTTTGAAGGACGGCTTCCACAAGATCAAAGATAAAGTTGATTTCTGCGATGGACCTCTGTGCGGCGGCGGCTCCTCATTTCTAGGTTTTCTCTTCCGTAGATCTCCACTTTCTTTC ATGTGCTGCGGCGGAAAGCTGTGCATGCTCTGTGTCTGCCTGATCGCGGTCGCCGTCGCCGTCGGATTGCTCTTCGGATTCGGAGTTTTGAAGGACGGCTTCCACAAGATCAAAGATAAAGTTGATTTCTGCGATGGACCTCTGTGCGGCGGCGGCTCCTCATTTCTAGGTTTTCTCTTCCGTAGATCTCCACTTTCTTTC MCCGGKLCMLCVCLIAVAVAVGLLFGFGVLKDGFHKIKDKVDFCDGPLCGGGSSFLGFLFRRSPLSF Homology
BLAST of MS001451 vs. NCBI nr
Match: XP_022159379.1 (uncharacterized protein LOC111025796 [Momordica charantia]) HSP 1 Score: 137.9 bits (346), Expect = 3.2e-29 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of MS001451 vs. NCBI nr
Match: XP_008449006.1 (PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]) HSP 1 Score: 100.1 bits (248), Expect = 7.5e-18 Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS001451 vs. NCBI nr
Match: XP_038905566.1 (uncharacterized protein Os04g0629400 [Benincasa hispida]) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16 Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
BLAST of MS001451 vs. NCBI nr
Match: KAG7028302.1 (hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS001451 vs. NCBI nr
Match: KAG6596774.1 (hypothetical protein SDJN03_09954, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of MS001451 vs. ExPASy TrEMBL
Match: A0A6J1E285 (uncharacterized protein LOC111025796 OS=Momordica charantia OX=3673 GN=LOC111025796 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of MS001451 vs. ExPASy TrEMBL
Match: A0A1S3BL26 (uncharacterized protein LOC103491008 OS=Cucumis melo OX=3656 GN=LOC103491008 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.6e-18 Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0
BLAST of MS001451 vs. ExPASy TrEMBL
Match: A0A0A0L2S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045170 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 43/52 (82.69%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of MS001451 vs. ExPASy TrEMBL
Match: A0A6J1EWB7 (uncharacterized protein LOC111438773 OS=Cucurbita moschata OX=3662 GN=LOC111438773 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15 Identity = 41/52 (78.85%), Postives = 43/52 (82.69%), Query Frame = 0
BLAST of MS001451 vs. ExPASy TrEMBL
Match: I1JJM5 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G303200 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of MS001451 vs. TAIR 10
Match: AT3G13275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 8.5e-12 Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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