MS001422 (gene) Bitter gourd (TR) v1

Overview


Name	MS001422
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Glutaredoxin
Location	scaffold36: 4021532 .. 4021915 (+)
RNA-Seq Expression	MS001422
Synteny	MS001422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCGGCCATGGAGCGCTGCGCAAATGACGCCGTATCCTCGGAATTGGCTCTCTGTGCGACGTCGTCTTCGTCCCTGTCGATCGACGTGGAGGAATCCACGGCGGCGCGGATCCGGCGGCTGATAGCGGAGCATCCGGTGATCATCTTCAGCCGCACCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTGGCCACCATCGGCGTCCATCCCACCGTCATCCAGCTCGACCACCACCACGAGATGGCCGCCGTCCCTTCCTCCTCCGCGCCGGCGCTCTTCATCGGCGGCGCCTGCTTCGGCGGCTTGGAGACTCTCGTCGCCCTCCACCTCAGCGGCCATCTCGTTCCCAAGCTCATCCAAGTCGGAGCTCTCTCGGTA

mRNA sequence

TCTCCGGCCATGGAGCGCTGCGCAAATGACGCCGTATCCTCGGAATTGGCTCTCTGTGCGACGTCGTCTTCGTCCCTGTCGATCGACGTGGAGGAATCCACGGCGGCGCGGATCCGGCGGCTGATAGCGGAGCATCCGGTGATCATCTTCAGCCGCACCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTGGCCACCATCGGCGTCCATCCCACCGTCATCCAGCTCGACCACCACCACGAGATGGCCGCCGTCCCTTCCTCCTCCGCGCCGGCGCTCTTCATCGGCGGCGCCTGCTTCGGCGGCTTGGAGACTCTCGTCGCCCTCCACCTCAGCGGCCATCTCGTTCCCAAGCTCATCCAAGTCGGAGCTCTCTCGGTA

Coding sequence (CDS)

TCTCCGGCCATGGAGCGCTGCGCAAATGACGCCGTATCCTCGGAATTGGCTCTCTGTGCGACGTCGTCTTCGTCCCTGTCGATCGACGTGGAGGAATCCACGGCGGCGCGGATCCGGCGGCTGATAGCGGAGCATCCGGTGATCATCTTCAGCCGCACCGCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTGGCCACCATCGGCGTCCATCCCACCGTCATCCAGCTCGACCACCACCACGAGATGGCCGCCGTCCCTTCCTCCTCCGCGCCGGCGCTCTTCATCGGCGGCGCCTGCTTCGGCGGCTTGGAGACTCTCGTCGCCCTCCACCTCAGCGGCCATCTCGTTCCCAAGCTCATCCAAGTCGGAGCTCTCTCGGTA

Protein sequence

SPAMERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQVGALSV

Homology

[Close]

BLAST of MS001422 vs. NCBI nr
Match: XP_022131984.1 (glutaredoxin-C6 [Momordica charantia])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           MERCAN AVSSELALCATSSSS SIDVEESTA RIRRLIAEHPVIIFSRTACSMCHVMKT
Sbjct: 1   MERCANGAVSSELALCATSSSSXSIDVEESTAVRIRRLIAEHPVIIFSRTACSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV 123
           LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV
Sbjct: 61  LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV 120

Query: 124 GALSV 129
           GALSV
Sbjct: 121 GALSV 125

[Close]

BLAST of MS001422 vs. NCBI nr
Match: XP_022997508.1 (glutaredoxin-C6-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M  CAND VSSEL    TSSSSLSIDV+ES+ ARIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+L+ H E+AAVPS      SSAPA+FIGGA FGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL+V
Sbjct: 121 PKLIEVGALAV 131

[Close]

BLAST of MS001422 vs. NCBI nr
Match: XP_023546567.1 (glutaredoxin-C6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M  CAND VSSEL    TSSSSLSIDV+ES+ ARIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+L+ H E+AAVPS      SSAPA+FIGGA FGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL+V
Sbjct: 121 PKLIEVGALTV 131

[Close]

BLAST of MS001422 vs. NCBI nr
Match: XP_022961714.1 (glutaredoxin-C6-like [Cucurbita moschata])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M  CAND VSSEL    TSSSSLSIDV+ES+ ARIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+L+ H E+AAVPS      SSAPA+FIGGA FGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFIRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL+V
Sbjct: 121 PKLIEVGALTV 131

[Close]

BLAST of MS001422 vs. NCBI nr
Match: XP_038885533.1 (glutaredoxin-C6-like isoform X1 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 101/131 (77.10%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M RC ND VSSE     TSSSSLSIDV+ES+  RIRRLIAEHPVIIFSRT+CSMCHVMKT
Sbjct: 1   MHRCPNDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRTSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+LD H E+AAVPS      SSAPA+FIGGA FGGLE+LVALHLSGHL+
Sbjct: 61  LLAIIGVHPTVIELDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLI 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL V
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of MS001422 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 5.6e-33
Identity = 84/139 (60.43%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 4   MERCANDAVSSELA-LCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMK 63
           ++R +ND V  +L     TSS+SLSID EEST A+IRRLI+EHPVIIFSR++C MCHVMK
Sbjct: 7   LQRFSNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMK 66

Query: 64  TLLATIGVHPTVIQLDHHHEMAAVPSS-------------SAPALFIGGACFGGLETLVA 123
            LLATIGV PTVI+LD  HE++++P++               PA+FIG  C GGLE+LVA
Sbjct: 67  RLLATIGVIPTVIELD-DHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVA 126

Query: 124 LHLSGHLVPKLIQVGALSV 129
           LHLSG LVPKL+QVGAL V
Sbjct: 127 LHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of MS001422 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-29
Identity = 72/141 (51.06%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 4   MERCANDAVSSELAL-----------------CATSSSSLSIDVEESTAARIRRLIAEHP 63
           +  C+NDAV+ +L +                  +T+S+SLS D EE++ ++I RLI+EHP
Sbjct: 7   LRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHP 66

Query: 64  VIIFSR-TACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLE 123
           VIIF+R ++C MCHVMK LL+T+GVHPTVI++D   E+A +   +AP LFIGG C GG E
Sbjct: 67  VIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEID-DGEIAYLAVEAAPVLFIGGTCVGGFE 126

Query: 124 TLVALHLSGHLVPKLIQVGAL 127
           +LVALHLSG L+P+L++VGAL
Sbjct: 127 SLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of MS001422 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-22
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 32  ESTAARIRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVPSSSA 91
           E  A RI RL+ E PV+IF+R  C MCHVM+ LLA +G H TVI+LD   E AA  +++A
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAASAAAA 98

Query: 92  ---PALFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
              PALF+GGA  GGL+ L+ LHLSG LVP+L +VGAL
Sbjct: 99  AAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of MS001422 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-19
Identity = 55/109 (50.46%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 25  SLSID---VEESTAARIRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLD--- 84
           SL+ID    EE+ A R+ RL+ E PV++F+R  C M HVM+ LLA +G H TVI+L+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 85  -HHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
               E A    ++ PALF+GG   GGLE L+ LHLSG LVP+L +VGAL
Sbjct: 75  AEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of MS001422 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-14
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 38  IRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVPSS----SAPA 97
           +RR +AE PV++  R+ C + HV+K LL  +GV+P V ++    E+A V +     + PA
Sbjct: 38  VRRAVAECPVVVVGRSGCCLSHVVKRLLQGLGVNPAVHEVAGEAELAGVVAGGGGVALPA 97

Query: 98  LFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
           +F+GG   GGL+ L+A+H+SG LVP L + GAL
Sbjct: 98  VFVGGRLLGGLDRLMAVHISGELVPILKEAGAL 130

[Close]

BLAST of MS001422 vs. ExPASy TrEMBL
Match: A0A6J1BRS7 (glutaredoxin-C6 OS=Momordica charantia OX=3673 GN=LOC111004965 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.8e-58
Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           MERCAN AVSSELALCATSSSS SIDVEESTA RIRRLIAEHPVIIFSRTACSMCHVMKT
Sbjct: 1   MERCANGAVSSELALCATSSSSXSIDVEESTAVRIRRLIAEHPVIIFSRTACSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV 123
           LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV
Sbjct: 61  LLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQV 120

Query: 124 GALSV 129
           GALSV
Sbjct: 121 GALSV 125

[Close]

BLAST of MS001422 vs. ExPASy TrEMBL
Match: A0A6J1KE42 (glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.6e-44
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M  CAND VSSEL    TSSSSLSIDV+ES+ ARIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+L+ H E+AAVPS      SSAPA+FIGGA FGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL+V
Sbjct: 121 PKLIEVGALAV 131

[Close]

BLAST of MS001422 vs. ExPASy TrEMBL
Match: A0A6J1HEU7 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.6e-44
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M  CAND VSSEL    TSSSSLSIDV+ES+ ARIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MNLCANDVVSSELPPSPTSSSSLSIDVDESSEARIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI+L+ H E+AAVPS      SSAPA+FIGGA FGGLETLVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIELNDHDEIAAVPSSSFIRDSSAPAVFIGGASFGGLETLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL+V
Sbjct: 121 PKLIEVGALTV 131

[Close]

BLAST of MS001422 vs. ExPASy TrEMBL
Match: A0A5A7UYF1 (Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001380 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 98/131 (74.81%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M R  NDAVS E     TSSSSLSIDV+ES+  RIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI++D H E+AAVPS      SSAPA+FIGGA FGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL V
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of MS001422 vs. ExPASy TrEMBL
Match: A0A1S3BAG0 (glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.6e-41
Identity = 98/131 (74.81%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 4   MERCANDAVSSELALCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKT 63
           M R  NDAVS E     TSSSSLSIDV+ES+  RIRRLI EHPVIIFSR++CSMCHVMKT
Sbjct: 1   MRRSTNDAVSFEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKT 60

Query: 64  LLATIGVHPTVIQLDHHHEMAAVPS------SSAPALFIGGACFGGLETLVALHLSGHLV 123
           LLA IGVHPTVI++D H E+AAVPS      SSAPA+FIGGA FGGLE+LVALHLSGHLV
Sbjct: 61  LLAIIGVHPTVIEVDDHDEIAAVPSSSFVRDSSAPAVFIGGASFGGLESLVALHLSGHLV 120

Query: 124 PKLIQVGALSV 129
           PKLI+VGAL V
Sbjct: 121 PKLIEVGALPV 131

[Close]

BLAST of MS001422 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.0e-34
Identity = 84/139 (60.43%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 4   MERCANDAVSSELA-LCATSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMK 63
           ++R +ND V  +L     TSS+SLSID EEST A+IRRLI+EHPVIIFSR++C MCHVMK
Sbjct: 7   LQRFSNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVMK 66

Query: 64  TLLATIGVHPTVIQLDHHHEMAAVPSS-------------SAPALFIGGACFGGLETLVA 123
            LLATIGV PTVI+LD  HE++++P++               PA+FIG  C GGLE+LVA
Sbjct: 67  RLLATIGVIPTVIELD-DHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLVA 126

Query: 124 LHLSGHLVPKLIQVGALSV 129
           LHLSG LVPKL+QVGAL V
Sbjct: 127 LHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of MS001422 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 9.2e-31
Identity = 72/141 (51.06%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 4   MERCANDAVSSELAL-----------------CATSSSSLSIDVEESTAARIRRLIAEHP 63
           +  C+NDAV+ +L +                  +T+S+SLS D EE++ ++I RLI+EHP
Sbjct: 7   LRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLISEHP 66

Query: 64  VIIFSR-TACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVPSSSAPALFIGGACFGGLE 123
           VIIF+R ++C MCHVMK LL+T+GVHPTVI++D   E+A +   +AP LFIGG C GG E
Sbjct: 67  VIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEID-DGEIAYLAVEAAPVLFIGGTCVGGFE 126

Query: 124 TLVALHLSGHLVPKLIQVGAL 127
           +LVALHLSG L+P+L++VGAL
Sbjct: 127 SLVALHLSGQLIPRLVEVGAL 146

[Close]

BLAST of MS001422 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 7.1e-15
Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 32  ESTAARIRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLDHHHEMAAVP---- 91
           +    R+R ++ E+ VI+  R  C MCHV++ LL  +GV+P V+++D   E   +     
Sbjct: 29  QGNGERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELEN 88

Query: 92  --------SSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
                   +   PA+++GG  FGGL+ ++A H+SG LVP L +VGAL
Sbjct: 89  IGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGAL 135

[Close]

BLAST of MS001422 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.6e-13
Identity = 39/110 (35.45%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 21  TSSSSLSIDVEESTAARIRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQL--- 80
           TS S     +    ++ +  ++ E+ V++F+R  C + HV K LL T GV+P V+++   
Sbjct: 41  TSGSPKPTSISNKRSSNL--VVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEE 100

Query: 81  -DHHHEMAAVPSSSAPALFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
            +++++         P ++IGG  FGGLE L+A H++G LVP L Q GAL
Sbjct: 101 DNNNYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDLVPTLRQAGAL 148

[Close]

BLAST of MS001422 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 6.6e-13
Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 38  IRRLIAEHPVIIFSRTACSMCHVMKTLLATIGVHPTVIQLDH-------HHEMAAVP-SS 97
           ++++I+E  V+IFS+ +C M H +KTL   +GV+PT+ +LD         H +A +  S 
Sbjct: 4   LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSP 63

Query: 98  SAPALFIGGACFGGLETLVALHLSGHLVPKLIQVGAL 127
           + P +FIGG   GG   +++LHL+  LVP L + GAL
Sbjct: 64  TVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGAL 100

The following BLAST results are available for this feature:

BLAST of MS001422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131984.1	1.4e-57	97.60	glutaredoxin-C6 [Momordica charantia]	[more]
XP_022997508.1	2.0e-43	77.86	glutaredoxin-C6-like [Cucurbita maxima]	[more]
XP_023546567.1	2.0e-43	77.86	glutaredoxin-C6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961714.1	2.0e-43	77.86	glutaredoxin-C6-like [Cucurbita moschata]	[more]
XP_038885533.1	2.0e-43	77.10	glutaredoxin-C6-like isoform X1 [Benincasa hispida]	[more]

BLAST of MS001422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	5.6e-33	60.43	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	1.3e-29	51.06	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	3.4e-22	57.14	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	1.6e-19	50.46	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
P0C291	7.6e-14	43.01	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]

BLAST of MS001422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRS7	6.8e-58	97.60	glutaredoxin-C6 OS=Momordica charantia OX=3673 GN=LOC111004965 PE=3 SV=1	[more]
A0A6J1KE42	9.6e-44	77.86	glutaredoxin-C6-like OS=Cucurbita maxima OX=3661 GN=LOC111492406 PE=3 SV=1	[more]
A0A6J1HEU7	9.6e-44	77.86	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111462402 PE=3 SV=1	[more]
A0A5A7UYF1	2.6e-41	74.81	Glutaredoxin-C6-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3BAG0	2.6e-41	74.81	glutaredoxin-C6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487778 PE=3 SV=...	[more]

BLAST of MS001422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	4.0e-34	60.43	Thioredoxin superfamily protein	[more]
AT5G11930.1	9.2e-31	51.06	Thioredoxin superfamily protein	[more]
AT1G28480.1	7.1e-15	36.45	Thioredoxin superfamily protein	[more]
AT1G03850.2	6.6e-13	35.45	Glutaredoxin family protein	[more]
AT4G15700.1	6.6e-13	39.18	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 28..128 e-value: 1.4E-21 score: 78.2
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 10..127
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..127 score: 16.998293
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 38..127 e-value: 2.0E-29 score: 99.5
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 10..127
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 47..99 e-value: 9.6E-7 score: 28.9
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 36..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001422.1	MS001422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity