MS001374 (gene) Bitter gourd (TR) v1

Overview


Name	MS001374
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger protein CONSTANS
Location	scaffold36: 3637040 .. 3637306 (-)
RNA-Seq Expression	MS001374
Synteny	MS001374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGACTCGTGTAAGTCGGCGACGGCGACTCTCTTCTGCAGAGCCGACTCGGCCTTCCTTTGCCTTGGCTGTGACTCCAAAGTTCACGCCGCCAACAAGCTCGCTTCTCGCCATGCCCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCTGCCCATGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATCCACTCTGCTAATCCGCTTGCTCGCCGTCACGAGCGGGTACCTGTGACGCCGTTC

mRNA sequence

TGTGACTCGTGTAAGTCGGCGACGGCGACTCTCTTCTGCAGAGCCGACTCGGCCTTCCTTTGCCTTGGCTGTGACTCCAAAGTTCACGCCGCCAACAAGCTCGCTTCTCGCCATGCCCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCTGCCCATGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATCCACTCTGCTAATCCGCTTGCTCGCCGTCACGAGCGGGTACCTGTGACGCCGTTC

Coding sequence (CDS)

TGTGACTCGTGTAAGTCGGCGACGGCGACTCTCTTCTGCAGAGCCGACTCGGCCTTCCTTTGCCTTGGCTGTGACTCCAAAGTTCACGCCGCCAACAAGCTCGCTTCTCGCCATGCCCGCGTTTGGGTCTGTGAGGTCTGCGAGCAAGCTCCTGCCCATGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCCTCACTTGCGACCACGATATCCACTCTGCTAATCCGCTTGCTCGCCGTCACGAGCGGGTACCTGTGACGCCGTTC

Protein sequence

CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCLTCDHDIHSANPLARRHERVPVTPF

Homology

[Close]

BLAST of MS001374 vs. NCBI nr
Match: XP_008445288.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 5.6e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. NCBI nr
Match: KAA0064869.1 (zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 5.6e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. NCBI nr
Match: XP_004138691.1 (zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN63011.1 hypothetical protein Csa_021815 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 5.6e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. NCBI nr
Match: XP_028799044.1 (zinc finger protein CONSTANS-LIKE 4 [Prosopis alba])

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 87/89 (97.75%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLC+GCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCVGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALC+TCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCITCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. NCBI nr
Match: XP_038884657.1 (zinc finger protein CONSTANS-LIKE 4 [Benincasa hispida])

HSP 1 Score: 187.2 bits (474), Expect = 6.2e-44
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCL CDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLVCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-43
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATA L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALC+TCD DIHSANPLARRHERVPVTPF
Sbjct: 66 AALCVTCDRDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.1e-41
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADA
Sbjct: 8  CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALC+TCD DIHSANPL+RRHERVP+TPF
Sbjct: 68 AALCVTCDRDIHSANPLSRRHERVPITPF 96

[Close]

BLAST of MS001374 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-32
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1   CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
           CD+CKS TA +FCR DSAFLC+ CD+++H+     +RH RVWVCEVCEQAPA VTCKADA
Sbjct: 22  CDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEVCEQAPAAVTCKADA 81

Query: 61  AALCLTCDHDIHSANPLARRHERVPVTPF 90
           AALC++CD DIHSANPLA RHERVPV  F
Sbjct: 82  AALCVSCDADIHSANPLASRHERVPVETF 106

[Close]

BLAST of MS001374 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 7.4e-32
Identity = 61/88 (69.32%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV VC+ CE+APA   CKADA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTP 89
          A+LC TCD +IHSANPLARRH+RVP+ P
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPILP 99

[Close]

BLAST of MS001374 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.1e-30
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1   CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
           CD+C+SA  T++C ADSA+LC  CD++VHAAN++ASRH RV VC+ CE APA   CKADA
Sbjct: 16  CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75

Query: 61  AALCLTCDHDIHSANPLARRHERVPVTP 89
           A+LC  CD +IHSANPLARRH+RVP+ P
Sbjct: 76  ASLCTACDAEIHSANPLARRHQRVPILP 103

[Close]

BLAST of MS001374 vs. ExPASy TrEMBL
Match: A0A5A7VHC1 (Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001820 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy TrEMBL
Match: A0A0A0LSP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G383330 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy TrEMBL
Match: A0A1S3BBV1 (zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103488365 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCLTCDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLTCDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy TrEMBL
Match: A0A6J1K9B3 (zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492279 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.7e-44
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCL CDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLACDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. ExPASy TrEMBL
Match: A0A6J1HEL1 (zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462832 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.7e-44
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVTCKADA
Sbjct: 6  CDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCKADA 65

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALCL CDHDIHSANPLARRHERVPVTPF
Sbjct: 66 AALCLACDHDIHSANPLARRHERVPVTPF 94

[Close]

BLAST of MS001374 vs. TAIR 10
Match: AT5G24930.1 (CONSTANS-like 4 )

HSP 1 Score: 176.8 bits (447), Expect = 7.8e-45
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1   CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
           CDSCKSATA L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVTCKADA
Sbjct: 50  CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADA 109

Query: 61  AALCLTCDHDIHSANPLARRHERVPVTPF 90
           AALC+TCD DIHSANPLARRHERVPVTPF
Sbjct: 110 AALCVTCDRDIHSANPLARRHERVPVTPF 138

[Close]

BLAST of MS001374 vs. TAIR 10
Match: AT2G24790.2 (CONSTANS-like 3 )

HSP 1 Score: 167.9 bits (424), Expect = 3.6e-42
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADA
Sbjct: 8  CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALC+TCD DIHSANPL+RRHERVP+TPF
Sbjct: 68 AALCVTCDRDIHSANPLSRRHERVPITPF 96

[Close]

BLAST of MS001374 vs. TAIR 10
Match: AT2G24790.1 (CONSTANS-like 3 )

HSP 1 Score: 167.9 bits (424), Expect = 3.6e-42
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CDSCKS  ATLFCRAD+AFLC  CD K+H ANKLASRH RVW+CEVCEQAPAHVTCKADA
Sbjct: 8  CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTPF 90
          AALC+TCD DIHSANPL+RRHERVP+TPF
Sbjct: 68 AALCVTCDRDIHSANPLSRRHERVPITPF 96

[Close]

BLAST of MS001374 vs. TAIR 10
Match: AT5G57660.1 (CONSTANS-like 5 )

HSP 1 Score: 139.4 bits (350), Expect = 1.4e-33
Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 1   CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
           CD+CKS TA +FCR DSAFLC+ CD+++H+     +RH RVWVCEVCEQAPA VTCKADA
Sbjct: 22  CDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEVCEQAPAAVTCKADA 81

Query: 61  AALCLTCDHDIHSANPLARRHERVPVTPF 90
           AALC++CD DIHSANPLA RHERVPV  F
Sbjct: 82  AALCVSCDADIHSANPLASRHERVPVETF 106

[Close]

BLAST of MS001374 vs. TAIR 10
Match: AT5G15850.1 (CONSTANS-like 1 )

HSP 1 Score: 137.5 bits (345), Expect = 5.2e-33
Identity = 61/88 (69.32%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  CDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVTCKADA 60
          CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV VC+ CE+APA   CKADA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71

Query: 61 AALCLTCDHDIHSANPLARRHERVPVTP 89
          A+LC TCD +IHSANPLARRH+RVP+ P
Sbjct: 72 ASLCTTCDSEIHSANPLARRHQRVPILP 99

The following BLAST results are available for this feature:

BLAST of MS001374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445288.1	5.6e-45	100.00	PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo]	[more]
KAA0064869.1	5.6e-45	100.00	zinc finger protein CONSTANS-LIKE 4 [Cucumis melo var. makuwa]	[more]
XP_004138691.1	5.6e-45	100.00	zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus] >KGN63011.1 hypothetical p...	[more]
XP_028799044.1	2.1e-44	97.75	zinc finger protein CONSTANS-LIKE 4 [Prosopis alba]	[more]
XP_038884657.1	6.2e-44	98.88	zinc finger protein CONSTANS-LIKE 4 [Benincasa hispida]	[more]

BLAST of MS001374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T9	1.1e-43	91.01	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	5.1e-41	84.27	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9FHH8	1.9e-32	71.91	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	7.4e-32	69.32	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q96502	3.1e-30	65.91	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]

BLAST of MS001374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHC1	2.7e-45	100.00	Zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0LSP8	2.7e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G383330 PE=3 SV=1	[more]
A0A1S3BBV1	2.7e-45	100.00	zinc finger protein CONSTANS-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103488365 PE=3...	[more]
A0A6J1K9B3	6.7e-44	96.63	zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HEL1	6.7e-44	96.63	zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of MS001374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24930.1	7.8e-45	91.01	CONSTANS-like 4	[more]
AT2G24790.2	3.6e-42	84.27	CONSTANS-like 3	[more]
AT2G24790.1	3.6e-42	84.27	CONSTANS-like 3	[more]
AT5G57660.1	1.4e-33	71.91	CONSTANS-like 5	[more]
AT5G15850.1	5.2e-33	69.32	CONSTANS-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 44..86 e-value: 5.9E-9 score: 45.8 coord: 1..43 e-value: 3.0E-9 score: 46.7
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 1..38 e-value: 3.6E-6 score: 27.0 coord: 41..86 e-value: 3.0E-7 score: 30.5
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..43 score: 10.807648
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 39..86 score: 10.679628
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 1..89
None	No IPR available	PANTHER	PTHR31319:SF54	ZINC FINGER PROTEIN CONSTANS-LIKE 3	coord: 1..89
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 43..86 e-value: 3.3741E-11 score: 51.1443
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 1..43 e-value: 5.52582E-15 score: 60.7743

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001374.1	MS001374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding