MS001339 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGCCGATTTTCATCACTCTTCCTCCTTCGCTCACAAGCTCAAGTCCTCCATCGGCTGCTTCCGCGCCTCCGACCAGCCGTCGACCAAATCGCCGTGTTCCTGGTTCAAATCTACGGCCGCTGAATTCCCCGACTTACTTGACCGCTGCCGCTATCTCGTCGCTCGGATCGGTCGCGGCGGCCGGAGAAGGTACCACGCCTCCCCTGACTTTACCTACGATTCTTCCAGCTACGCGCTTAATTTTGAGGACGATTCCCGCTACGACGATGAATTTCCGCTCAGAAATTTCGCCGCCAGGTTGCCGCGCCTTCCGGCAGCCAAATTTGCCGGATCTCAAGCCGGAGTCAGTACCGTTGCTGCGTGTAGT ATGTTGGCCGATTTTCATCACTCTTCCTCCTTCGCTCACAAGCTCAAGTCCTCCATCGGCTGCTTCCGCGCCTCCGACCAGCCGTCGACCAAATCGCCGTGTTCCTGGTTCAAATCTACGGCCGCTGAATTCCCCGACTTACTTGACCGCTGCCGCTATCTCGTCGCTCGGATCGGTCGCGGCGGCCGGAGAAGGTACCACGCCTCCCCTGACTTTACCTACGATTCTTCCAGCTACGCGCTTAATTTTGAGGACGATTCCCGCTACGACGATGAATTTCCGCTCAGAAATTTCGCCGCCAGGTTGCCGCGCCTTCCGGCAGCCAAATTTGCCGGATCTCAAGCCGGAGTCAGTACCGTTGCTGCGTGTAGT ATGTTGGCCGATTTTCATCACTCTTCCTCCTTCGCTCACAAGCTCAAGTCCTCCATCGGCTGCTTCCGCGCCTCCGACCAGCCGTCGACCAAATCGCCGTGTTCCTGGTTCAAATCTACGGCCGCTGAATTCCCCGACTTACTTGACCGCTGCCGCTATCTCGTCGCTCGGATCGGTCGCGGCGGCCGGAGAAGGTACCACGCCTCCCCTGACTTTACCTACGATTCTTCCAGCTACGCGCTTAATTTTGAGGACGATTCCCGCTACGACGATGAATTTCCGCTCAGAAATTTCGCCGCCAGGTTGCCGCGCCTTCCGGCAGCCAAATTTGCCGGATCTCAAGCCGGAGTCAGTACCGTTGCTGCGTGTAGT MLADFHHSSSFAHKLKSSIGCFRASDQPSTKSPCSWFKSTAAEFPDLLDRCRYLVARIGRGGRRRYHASPDFTYDSSSYALNFEDDSRYDDEFPLRNFAARLPRLPAAKFAGSQAGVSTVAACS Homology
BLAST of MS001339 vs. NCBI nr
Match: XP_022131639.1 (uncharacterized protein LOC111004768 [Momordica charantia]) HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of MS001339 vs. NCBI nr
Match: XP_022962228.1 (uncharacterized protein LOC111462741 [Cucurbita moschata] >KAG6598557.1 hypothetical protein SDJN03_08335, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029495.1 hypothetical protein SDJN02_07834, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 83/132 (62.88%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of MS001339 vs. NCBI nr
Match: XP_022997531.1 (uncharacterized protein LOC111492424 [Cucurbita maxima]) HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32 Identity = 83/132 (62.88%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of MS001339 vs. NCBI nr
Match: XP_023546798.1 (uncharacterized protein LOC111805797 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 148.7 bits (374), Expect = 3.4e-32 Identity = 83/132 (62.88%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of MS001339 vs. NCBI nr
Match: XP_022138148.1 (uncharacterized protein LOC111009386 [Momordica charantia]) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-22 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of MS001339 vs. ExPASy TrEMBL
Match: A0A6J1BQU1 (uncharacterized protein LOC111004768 OS=Momordica charantia OX=3673 GN=LOC111004768 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 8.1e-64 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of MS001339 vs. ExPASy TrEMBL
Match: A0A6J1HE78 (uncharacterized protein LOC111462741 OS=Cucurbita moschata OX=3662 GN=LOC111462741 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.4e-33 Identity = 83/132 (62.88%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of MS001339 vs. ExPASy TrEMBL
Match: A0A6J1K7R1 (uncharacterized protein LOC111492424 OS=Cucurbita maxima OX=3661 GN=LOC111492424 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32 Identity = 83/132 (62.88%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of MS001339 vs. ExPASy TrEMBL
Match: A0A6J1CC83 (uncharacterized protein LOC111009386 OS=Momordica charantia OX=3673 GN=LOC111009386 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 9.0e-23 Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of MS001339 vs. ExPASy TrEMBL
Match: A0A6J1J1H3 (uncharacterized protein LOC111480417 OS=Cucurbita maxima OX=3661 GN=LOC111480417 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 5.8e-22 Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of MS001339 vs. TAIR 10
Match: AT5G11070.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 0
BLAST of MS001339 vs. TAIR 10
Match: AT5G35090.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 8.1e-08 Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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