Homology
BLAST of MS001308 vs. NCBI nr
Match:
XP_022131416.1 (pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia] >XP_022131419.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia] >XP_022131420.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia])
HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 564/568 (99.30%), Postives = 567/568 (99.82%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVI+ATDYAASFLFSAGADTRLYDAFL
Sbjct: 39 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVISATDYAASFLFSAGADTRLYDAFL 98
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV
Sbjct: 99 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 158
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFDRDVHVRNTMVHMYSCCAGGINFARK+FDEMPKSDSVTWSAMIGGYARVGRPTEA
Sbjct: 159 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKVFDEMPKSDSVTWSAMIGGYARVGRPTEA 218
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
VSLFREMQLAEVCPDEITMVS+LSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM
Sbjct: 219 VSLFREMQLAEVCPDEITMVSILSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 278
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 300
FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF
Sbjct: 279 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 338
Query: 301 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 360
IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP
Sbjct: 339 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 398
Query: 361 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 420
IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK
Sbjct: 399 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 458
Query: 421 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 480
IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 518
Query: 481 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 540
TSEVLLDINEEDKEDTLNRH EKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK
Sbjct: 519 TSEVLLDINEEDKEDTLNRHGEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 578
Query: 541 IYDREIIMRDRNRFHHFKAGICSCGDFW 569
IYDREIIMRDRNRFHHFKAGICSCGDFW
Sbjct: 579 IYDREIIMRDRNRFHHFKAGICSCGDFW 606
BLAST of MS001308 vs. NCBI nr
Match:
XP_023537014.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537016.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537017.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537018.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 527/569 (92.62%), Postives = 549/569 (96.49%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CN+LPKL QIHAHI KLGLHNNPLVLTKFASISSVINATDYAASFLFSA ADTRLYDAFL
Sbjct: 34 CNSLPKLTQIHAHIFKLGLHNNPLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFL 93
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRA+AQTGHSK +AL+LYG+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSV
Sbjct: 94 FNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSV 153
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD DVHV+NTMVHMYSCC+GGI FARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 154 VKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 213
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVSVLSACTDLGALELGKW+EAYIERQGIQKP EVSNALIDM
Sbjct: 214 VALFREMQMAEVCPDEITMVSVLSACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDM 273
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVA 300
FAKCGDI KALKLF+ MS+KTIVSWTSVIVGMAMHGRGQ+AI LFEEMIG SGVAPDDVA
Sbjct: 274 FAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVA 333
Query: 301 FIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSM 360
FIGLLSACSHSG+VERGREYF+SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+M
Sbjct: 334 FIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNM 393
Query: 361 PIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKT 420
PIEPN VILRTLVSACRGHGEF+LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKKT
Sbjct: 394 PIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKT 453
Query: 421 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRP 480
KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRP
Sbjct: 454 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRP 513
Query: 481 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 540
STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS
Sbjct: 514 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 573
Query: 541 KIYDREIIMRDRNRFHHFKAGICSCGDFW 569
KIYDREIIMRDRNRFHHFK G+CSCGDFW
Sbjct: 574 KIYDREIIMRDRNRFHHFKGGLCSCGDFW 602
BLAST of MS001308 vs. NCBI nr
Match:
XP_038884201.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])
HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 519/568 (91.37%), Postives = 551/568 (97.01%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CNALPKL QIH HILKLGLHNNPLVLTKFASISS+I+ATDYAASFLFSA ADTRLYDAFL
Sbjct: 38 CNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFL 97
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRAYAQTGHSK KAL+LY +ML DGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV
Sbjct: 98 FNTLIRAYAQTGHSKDKALSLYSIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 157
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFDRD+HV+NTM+HMYSCCAGGIN ARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 158 VKFGFDRDIHVQNTMIHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 217
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVS+LSACTDLGALELGKW+EAYIERQGI KP EVSNALIDM
Sbjct: 218 VALFREMQMAEVCPDEITMVSILSACTDLGALELGKWIEAYIERQGIHKPVEVSNALIDM 277
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 300
FAKCGDI+KALKLF+ ++EKTIVSWTSVIVGMAMHGRGQ+AICLFEEMI SGVAPDDV+F
Sbjct: 278 FAKCGDINKALKLFRALNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIVSGVAPDDVSF 337
Query: 301 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 360
IGLLSACSHSG+VERGREYFSSM KKYKL PKIEHYGCMVDM+CRTGLVKEAL+FVH+MP
Sbjct: 338 IGLLSACSHSGLVERGREYFSSMMKKYKLAPKIEHYGCMVDMYCRTGLVKEALQFVHNMP 397
Query: 361 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 420
+EPN VILRTLVSACRGHGEF+LGEKITK LMRHEP+HESNYVLLSNIYAKMLSWEKKTK
Sbjct: 398 VEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTK 457
Query: 421 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 480
IREVMEVKGMKK+PGSTMIEIDNEIYEFVAGDKSHKQ+KEIYEMVDEMGREMKKSGYRPS
Sbjct: 458 IREVMEVKGMKKIPGSTMIEIDNEIYEFVAGDKSHKQYKEIYEMVDEMGREMKKSGYRPS 517
Query: 481 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 540
TSEVLLDINEEDKEDTLNRHSEKLAIAFGLL+TPPGTPIRIVKNLRVCSDCHSASK+IS
Sbjct: 518 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCSDCHSASKYISN 577
Query: 541 IYDREIIMRDRNRFHHFKAGICSCGDFW 569
IY+REIIMRDRNRFHHFK+G+CSCGDFW
Sbjct: 578 IYNREIIMRDRNRFHHFKSGLCSCGDFW 605
BLAST of MS001308 vs. NCBI nr
Match:
XP_023002279.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023002280.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023002281.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])
HSP 1 Score: 1072.0 bits (2771), Expect = 1.7e-309
Identity = 527/569 (92.62%), Postives = 546/569 (95.96%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CN LPKL QIHAHI KLGLHNNPLVLTKF SISSVINATDYAASFLFSA ADTRLYDAFL
Sbjct: 34 CNLLPKLTQIHAHIFKLGLHNNPLVLTKFVSISSVINATDYAASFLFSAEADTRLYDAFL 93
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRA+AQTGHSK +AL+LYG+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSV
Sbjct: 94 FNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSV 153
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD DVHV+NTMVHMYSCCA GI FARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 154 VKFGFDHDVHVQNTMVHMYSCCADGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 213
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEV PDEITMVSVLSACTDLGALELGKW+EAYIERQGIQKP EVSNALIDM
Sbjct: 214 VALFREMQMAEVFPDEITMVSVLSACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDM 273
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVA 300
FAKCGDI KALKLF+ MSEKTIVSWTSVIVGMAMHGRGQ+AICLFEEMIG SGVAPDDVA
Sbjct: 274 FAKCGDIGKALKLFRVMSEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIGSSGVAPDDVA 333
Query: 301 FIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSM 360
FIGLLSACSHSG+VERGREYFSSM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+M
Sbjct: 334 FIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNM 393
Query: 361 PIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKT 420
PIEPN VILRTLVSACRGHGEF+LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKK
Sbjct: 394 PIEPNTVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKA 453
Query: 421 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRP 480
KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRP
Sbjct: 454 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRP 513
Query: 481 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 540
STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVC+DCHSASKFIS
Sbjct: 514 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFIS 573
Query: 541 KIYDREIIMRDRNRFHHFKAGICSCGDFW 569
KIYDREIIMRDRNRFHHFKAG+CSCGDFW
Sbjct: 574 KIYDREIIMRDRNRFHHFKAGLCSCGDFW 602
BLAST of MS001308 vs. NCBI nr
Match:
XP_022951399.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] >XP_022951400.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] >XP_022951401.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])
HSP 1 Score: 1068.1 bits (2761), Expect = 2.5e-308
Identity = 523/569 (91.92%), Postives = 546/569 (95.96%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CN+LPKL QIHAHI KLGL NNPLVLTKFASISSVINATDYAASFLFSA ADTRLYDAFL
Sbjct: 34 CNSLPKLTQIHAHIFKLGLRNNPLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFL 93
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRA+AQTGHSK +AL+LYG+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSV
Sbjct: 94 FNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSV 153
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD DVHV+NTMVHMYSCC+GGI FARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 154 VKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 213
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVSVLSACTDLGALELGKW+EAYIERQGIQKP EVSNALIDM
Sbjct: 214 VALFREMQMAEVCPDEITMVSVLSACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDM 273
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVA 300
FAKCGDI KALKLF+ MS+KTIVSWTSVIVGMAMHGRG +AICLFEEMIG S VAPDDVA
Sbjct: 274 FAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGLEAICLFEEMIGSSSVAPDDVA 333
Query: 301 FIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSM 360
FIGLLSACSHSG+VERGREYF+SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+M
Sbjct: 334 FIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNM 393
Query: 361 PIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKT 420
P EPN VILRTLVSACRGHGEF+LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKKT
Sbjct: 394 PFEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKT 453
Query: 421 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRP 480
KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRP
Sbjct: 454 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRP 513
Query: 481 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 540
STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVC+DCHSASKFIS
Sbjct: 514 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFIS 573
Query: 541 KIYDREIIMRDRNRFHHFKAGICSCGDFW 569
KIYDREIIMRDRNRFHHFK G+CSCGDFW
Sbjct: 574 KIYDREIIMRDRNRFHHFKGGLCSCGDFW 602
BLAST of MS001308 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 505.8 bits (1301), Expect = 6.6e-142
Identity = 252/570 (44.21%), Postives = 379/570 (66.49%), Query Frame = 0
Query: 2 NALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGAD-TRLYDAFL 61
+++ KL QIHA ++ G+ + L K V + S+ + + + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 62 FNTLIRAYAQTGHSKPKALALYGLMLRDGIL-PNKFTYPFVLKACAGLEVLNLGQSVHGS 121
+NTLIR YA+ G+S A +LY M G++ P+ TYPF++KA + + LG+++H
Sbjct: 88 WNTLIRGYAEIGNS-ISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 122 VVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTE 181
V++ GF ++V+N+++H+Y+ C G + A K+FD+MP+ D V W+++I G+A G+P E
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 207
Query: 182 AVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALID 241
A++L+ EM + PD T+VS+LSAC +GAL LGK + Y+ + G+ + SN L+D
Sbjct: 208 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267
Query: 242 MFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGS-GVAPDDV 301
++A+CG + +A LF M +K VSWTS+IVG+A++G G++AI LF+ M + G+ P ++
Sbjct: 268 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 327
Query: 302 AFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHS 361
F+G+L ACSH GMV+ G EYF M ++YK+ P+IEH+GCMVD+ R G VK+A E++ S
Sbjct: 328 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 387
Query: 362 MPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKK 421
MP++PN VI RTL+ AC HG+ L E Q+++ EP H +YVLLSN+YA W
Sbjct: 388 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 447
Query: 422 TKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYR 481
KIR+ M G+KKVPG +++E+ N ++EF+ GDKSH Q IY + EM ++ GY
Sbjct: 448 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 507
Query: 482 PSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFI 541
P S V +D+ EE+KE+ + HSEK+AIAF L++TP +PI +VKNLRVC+DCH A K +
Sbjct: 508 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 567
Query: 542 SKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
SK+Y+REI++RDR+RFHHFK G CSC D+W
Sbjct: 568 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of MS001308 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 2.3e-139
Identity = 253/589 (42.95%), Postives = 372/589 (63.16%), Query Frame = 0
Query: 9 QIHAHILKLGLHNNPLVLTKFASI----------SSVINATDYAASFLFSA---GADTRL 68
QIH H+LKLG + V T S+ V + + + ++A G +R
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 69 Y--------------DAFLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVL 128
Y D +N +I YA+TG+ K +AL L+ M++ + P++ T V+
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKDMMKTNVRPDESTMVTVV 274
Query: 129 KACAGLEVLNLGQSVHGSVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDS 188
ACA + LG+ VH + GF ++ + N ++ +YS C G + A +F+ +P D
Sbjct: 275 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGLFERLPYKDV 334
Query: 189 VTWSAMIGGYARVGRPTEAVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAY 248
++W+ +IGGY + EA+ LF+EM + P+++TM+S+L AC LGA+++G+W+ Y
Sbjct: 335 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 394
Query: 249 IER--QGIQKPEEVSNALIDMFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQ 308
I++ +G+ + +LIDM+AKCGDI A ++F ++ K++ SW ++I G AMHGR
Sbjct: 395 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 454
Query: 309 DAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCM 368
+ LF M G+ PDD+ F+GLLSACSHSGM++ GR F +MT+ YK+ PK+EHYGCM
Sbjct: 455 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 514
Query: 369 VDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHE 428
+D+ +GL KEA E ++ M +EP+ VI +L+ AC+ HG +LGE + L++ EP +
Sbjct: 515 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 574
Query: 429 SNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFK 488
+YVLLSNIYA W + K R ++ KGMKKVPG + IEID+ ++EF+ GDK H + +
Sbjct: 575 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 634
Query: 489 EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPI 548
EIY M++EM ++K+G+ P TSEVL ++ EE KE L HSEKLAIAFGL++T PGT +
Sbjct: 635 EIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 694
Query: 549 RIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
IVKNLRVC +CH A+K ISKIY REII RDR RFHHF+ G+CSC D+W
Sbjct: 695 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of MS001308 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 496.9 bits (1278), Expect = 3.0e-139
Identity = 250/571 (43.78%), Postives = 378/571 (66.20%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLV--LTKFASISSVINATDYAASFLFSAGADTRLYDA 60
CN+L +L QI A+ +K + + V L F + S ++ Y A LF A ++ D
Sbjct: 39 CNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY-ARHLFEAMSEP---DI 98
Query: 61 FLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHG 120
+FN++ R Y++ + + +L+ +L DGILP+ +T+P +LKACA + L G+ +H
Sbjct: 99 VIFNSMARGYSRFTNPL-EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 158
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPT 180
+K G D +V+V T+++MY+ C ++ AR +FD + + V ++AMI GYAR RP
Sbjct: 159 LSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 218
Query: 181 EAVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALI 240
EA+SLFREMQ + P+EIT++SVLS+C LG+L+LGKW+ Y ++ K +V+ ALI
Sbjct: 219 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 278
Query: 241 DMFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDV 300
DMFAKCG + A+ +F+ M K +W+++IV A HG+ + ++ +FE M V PD++
Sbjct: 279 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 338
Query: 301 AFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHS 360
F+GLL+ACSH+G VE GR+YFS M K+ +VP I+HYG MVD+ R G +++A EF+
Sbjct: 339 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 398
Query: 361 MPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKK 420
+PI P ++ R L++AC H L EK+++++ + H +YV+LSN+YA+ WE
Sbjct: 399 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 458
Query: 421 TKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYR 480
+R+VM+ + KVPG + IE++N ++EF +GD +++ +DEM +E+K SGY
Sbjct: 459 DSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYV 518
Query: 481 PSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKF 540
P TS V+ ++N+++KE TL HSEKLAI FGLLNTPPGT IR+VKNLRVC DCH+A+K
Sbjct: 519 PDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKL 578
Query: 541 ISKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
IS I+ R++++RD RFHHF+ G CSCGDFW
Sbjct: 579 ISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of MS001308 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 476.1 bits (1224), Expect = 5.6e-133
Identity = 247/614 (40.23%), Postives = 368/614 (59.93%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
C + L+QIHA +K G + L + + + + + F
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 61 FNTLIRAYAQTGHSKPK-ALALYGLMLRDGIL-PNKFTYPFVLKACAGLEVLNLGQSVHG 120
+NT+IR ++++ K A+ L+ M+ D + PN+FT+P VLKACA + G+ +HG
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCA----------------------------------- 180
+K+GF D V + +V MY C
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 181 ---------GGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEAVSLFREMQLAEVCP 240
G AR +FD+M + V+W+ MI GY+ G +AV +FREM+ ++ P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 241 DEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDMFAKCGDISKALKLF 300
+ +T+VSVL A + LG+LELG+WL Y E GI+ + + +ALIDM++KCG I KA+ +F
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 301 KTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVE 360
+ + + +++W+++I G A+HG+ DAI F +M +GV P DVA+I LL+ACSH G+VE
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 361 RGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSA 420
GR YFS M L P+IEHYGCMVD+ R+GL+ EA EF+ +MPI+P+ VI + L+ A
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 421 CRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVP 480
CR G ++G+++ LM P YV LSN+YA +W + +++R M+ K ++K P
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512
Query: 481 GSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKE 540
G ++I+ID ++EFV D SH + KEI M+ E+ +++ +GYRP T++VLL++ EEDKE
Sbjct: 513 GCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKE 572
Query: 541 DTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRF 569
+ L+ HSEK+A AFGL++T PG PIRIVKNLR+C DCHS+ K ISK+Y R+I +RDR RF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632
BLAST of MS001308 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 476.1 bits (1224), Expect = 5.6e-133
Identity = 239/602 (39.70%), Postives = 369/602 (61.30%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYA--ASFLFSAGADTRLYDA 60
C+ +L QIHA +LK GL + +TKF S ++D+ A +F G D D
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD-GFDRP--DT 83
Query: 61 FLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHG 120
FL+N +IR ++ + + ++L LY ML N +T+P +LKAC+ L +H
Sbjct: 84 FLWNLMIRGFSCSDEPE-RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 143
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGR-- 180
+ K G++ DV+ N++++ Y+ G A +FD +P+ D V+W+++I GY + G+
Sbjct: 144 QITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 203
Query: 181 -----------------------------PTEAVSLFREMQLAEVCPDEITMVSVLSACT 240
EA+ LF EMQ ++V PD +++ + LSAC
Sbjct: 204 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 263
Query: 241 DLGALELGKWLEAYIERQGIQKPEEVSNALIDMFAKCGDISKALKLFKTMSEKTIVSWTS 300
LGALE GKW+ +Y+ + I+ + LIDM+AKCG++ +AL++FK + +K++ +WT+
Sbjct: 264 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 323
Query: 301 VIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVERGREYFSSMTKKY 360
+I G A HG G++AI F EM G+ P+ + F +L+ACS++G+VE G+ F SM + Y
Sbjct: 324 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 383
Query: 361 KLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSACRGHGEFQLGEKI 420
L P IEHYGC+VD+ R GL+ EA F+ MP++PNAVI L+ ACR H +LGE+I
Sbjct: 384 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 443
Query: 421 TKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYE 480
+ L+ +P H YV +NI+A W+K + R +M+ +G+ KVPG + I ++ +E
Sbjct: 444 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 503
Query: 481 FVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLD-INEEDKEDTLNRHSEKLAI 540
F+AGD+SH + ++I M R+++++GY P E+LLD ++++++E +++HSEKLAI
Sbjct: 504 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAI 563
Query: 541 AFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKAGICSCGD 569
+GL+ T PGT IRI+KNLRVC DCH +K ISKIY R+I+MRDR RFHHF+ G CSCGD
Sbjct: 564 TYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 620
BLAST of MS001308 vs. ExPASy TrEMBL
Match:
A0A6J1BQ70 (pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charantia OX=3673 GN=LOC111004636 PE=3 SV=1)
HSP 1 Score: 1145.2 bits (2961), Expect = 0.0e+00
Identity = 564/568 (99.30%), Postives = 567/568 (99.82%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVI+ATDYAASFLFSAGADTRLYDAFL
Sbjct: 39 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVISATDYAASFLFSAGADTRLYDAFL 98
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV
Sbjct: 99 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 158
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFDRDVHVRNTMVHMYSCCAGGINFARK+FDEMPKSDSVTWSAMIGGYARVGRPTEA
Sbjct: 159 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKVFDEMPKSDSVTWSAMIGGYARVGRPTEA 218
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
VSLFREMQLAEVCPDEITMVS+LSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM
Sbjct: 219 VSLFREMQLAEVCPDEITMVSILSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 278
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 300
FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF
Sbjct: 279 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 338
Query: 301 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 360
IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP
Sbjct: 339 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 398
Query: 361 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 420
IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK
Sbjct: 399 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 458
Query: 421 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 480
IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 518
Query: 481 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 540
TSEVLLDINEEDKEDTLNRH EKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK
Sbjct: 519 TSEVLLDINEEDKEDTLNRHGEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 578
Query: 541 IYDREIIMRDRNRFHHFKAGICSCGDFW 569
IYDREIIMRDRNRFHHFKAGICSCGDFW
Sbjct: 579 IYDREIIMRDRNRFHHFKAGICSCGDFW 606
BLAST of MS001308 vs. ExPASy TrEMBL
Match:
A0A6J1KQ01 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima OX=3661 GN=LOC111496170 PE=3 SV=1)
HSP 1 Score: 1072.0 bits (2771), Expect = 8.4e-310
Identity = 527/569 (92.62%), Postives = 546/569 (95.96%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CN LPKL QIHAHI KLGLHNNPLVLTKF SISSVINATDYAASFLFSA ADTRLYDAFL
Sbjct: 34 CNLLPKLTQIHAHIFKLGLHNNPLVLTKFVSISSVINATDYAASFLFSAEADTRLYDAFL 93
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRA+AQTGHSK +AL+LYG+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSV
Sbjct: 94 FNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSV 153
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD DVHV+NTMVHMYSCCA GI FARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 154 VKFGFDHDVHVQNTMVHMYSCCADGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 213
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEV PDEITMVSVLSACTDLGALELGKW+EAYIERQGIQKP EVSNALIDM
Sbjct: 214 VALFREMQMAEVFPDEITMVSVLSACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDM 273
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVA 300
FAKCGDI KALKLF+ MSEKTIVSWTSVIVGMAMHGRGQ+AICLFEEMIG SGVAPDDVA
Sbjct: 274 FAKCGDIGKALKLFRVMSEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIGSSGVAPDDVA 333
Query: 301 FIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSM 360
FIGLLSACSHSG+VERGREYFSSM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+M
Sbjct: 334 FIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNM 393
Query: 361 PIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKT 420
PIEPN VILRTLVSACRGHGEF+LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKK
Sbjct: 394 PIEPNTVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKA 453
Query: 421 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRP 480
KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRP
Sbjct: 454 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRP 513
Query: 481 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 540
STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVC+DCHSASKFIS
Sbjct: 514 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFIS 573
Query: 541 KIYDREIIMRDRNRFHHFKAGICSCGDFW 569
KIYDREIIMRDRNRFHHFKAG+CSCGDFW
Sbjct: 574 KIYDREIIMRDRNRFHHFKAGLCSCGDFW 602
BLAST of MS001308 vs. ExPASy TrEMBL
Match:
A0A6J1GHH7 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata OX=3662 GN=LOC111454235 PE=3 SV=1)
HSP 1 Score: 1068.1 bits (2761), Expect = 1.2e-308
Identity = 523/569 (91.92%), Postives = 546/569 (95.96%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CN+LPKL QIHAHI KLGL NNPLVLTKFASISSVINATDYAASFLFSA ADTRLYDAFL
Sbjct: 34 CNSLPKLTQIHAHIFKLGLRNNPLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFL 93
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRA+AQTGHSK +AL+LYG+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSV
Sbjct: 94 FNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSV 153
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD DVHV+NTMVHMYSCC+GGI FARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 154 VKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 213
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVSVLSACTDLGALELGKW+EAYIERQGIQKP EVSNALIDM
Sbjct: 214 VALFREMQMAEVCPDEITMVSVLSACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDM 273
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVA 300
FAKCGDI KALKLF+ MS+KTIVSWTSVIVGMAMHGRG +AICLFEEMIG S VAPDDVA
Sbjct: 274 FAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGLEAICLFEEMIGSSSVAPDDVA 333
Query: 301 FIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSM 360
FIGLLSACSHSG+VERGREYF+SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+M
Sbjct: 334 FIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNM 393
Query: 361 PIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKT 420
P EPN VILRTLVSACRGHGEF+LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKKT
Sbjct: 394 PFEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKT 453
Query: 421 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRP 480
KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRP
Sbjct: 454 KIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRP 513
Query: 481 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFIS 540
STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVC+DCHSASKFIS
Sbjct: 514 STSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFIS 573
Query: 541 KIYDREIIMRDRNRFHHFKAGICSCGDFW 569
KIYDREIIMRDRNRFHHFK G+CSCGDFW
Sbjct: 574 KIYDREIIMRDRNRFHHFKGGLCSCGDFW 602
BLAST of MS001308 vs. ExPASy TrEMBL
Match:
A0A5A7V9A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002500 PE=3 SV=1)
HSP 1 Score: 1067.4 bits (2759), Expect = 2.1e-308
Identity = 522/568 (91.90%), Postives = 545/568 (95.95%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CNALPKL QIH HILKLGLHNNPLVLTKFASISS+I+ATDYAASFLFSA ADTRLYDAFL
Sbjct: 39 CNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFL 98
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRAYAQTGHSK KALALYG+ML DGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 158
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD D+HV+NTMVHMYSCCAGGIN ARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVS+LSACTDLGALELGKW+EAYIER GI KP EVSNALIDM
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHGIHKPVEVSNALIDM 278
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 300
FAKCGDISKALKLF+ M+EKTIVSWTSVIVGMAMHGRG++A CLFEEMI SGVAPDDVAF
Sbjct: 279 FAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGREATCLFEEMITSGVAPDDVAF 338
Query: 301 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 360
IGLLSACSHSG+VERGREYF SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFV +MP
Sbjct: 339 IGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMP 398
Query: 361 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 420
IEPN VILRTLV+ACRGHGEF+LGEKITK LM+HEP+HESNYVLLSNIYAK LSWEKKTK
Sbjct: 399 IEPNPVILRTLVTACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTK 458
Query: 421 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 480
IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQ KEIYEMVDEMGREMKKSGYRPS
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPS 518
Query: 481 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 540
TSEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVCSDCHSASKFISK
Sbjct: 519 TSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISK 578
Query: 541 IYDREIIMRDRNRFHHFKAGICSCGDFW 569
IYDREIIMRDRNRFHHFK+G CSCGDFW
Sbjct: 579 IYDREIIMRDRNRFHHFKSGQCSCGDFW 606
BLAST of MS001308 vs. ExPASy TrEMBL
Match:
A0A1S3BC37 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=3656 GN=LOC103488302 PE=3 SV=1)
HSP 1 Score: 1066.2 bits (2756), Expect = 4.6e-308
Identity = 521/568 (91.73%), Postives = 545/568 (95.95%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
CNALPKL QIH HI+KLGLHNNPLVLTKFASISS+I+ATDYAASFLFSA ADTRLYDAFL
Sbjct: 39 CNALPKLTQIHTHIVKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFL 98
Query: 61 FNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 120
FNTLIRAYAQTGHSK KALALYG+ML DGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV
Sbjct: 99 FNTLIRAYAQTGHSKDKALALYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSV 158
Query: 121 VKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEA 180
VKFGFD D+HV+NTMVHMYSCCAGGIN ARK+FDEMPKSDSVTWSAMIGGYARVGR TEA
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218
Query: 181 VSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDM 240
V+LFREMQ+AEVCPDEITMVS+LSACTDLGALELGKW+EAYIER GI KP EVSNALIDM
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHGIHKPVEVSNALIDM 278
Query: 241 FAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAF 300
FAKCGDISKALKLF+ M+EKTIVSWTSVIVGMAMHGRG++A CLFEEMI SGVAPDDVAF
Sbjct: 279 FAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGREATCLFEEMITSGVAPDDVAF 338
Query: 301 IGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMP 360
IGLLSACSHSG+VERGREYF SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFV +MP
Sbjct: 339 IGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMP 398
Query: 361 IEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTK 420
IEPN VILRTLV+ACRGHGEF+LGEKITK LM+HEP+HESNYVLLSNIYAK LSWEKKTK
Sbjct: 399 IEPNPVILRTLVTACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTK 458
Query: 421 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPS 480
IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQ KEIYEMVDEMGREMKKSGYRPS
Sbjct: 459 IREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPS 518
Query: 481 TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISK 540
TSEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVCSDCHSASKFISK
Sbjct: 519 TSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISK 578
Query: 541 IYDREIIMRDRNRFHHFKAGICSCGDFW 569
IYDREIIMRDRNRFHHFK+G CSCGDFW
Sbjct: 579 IYDREIIMRDRNRFHHFKSGQCSCGDFW 606
BLAST of MS001308 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 505.8 bits (1301), Expect = 4.7e-143
Identity = 252/570 (44.21%), Postives = 379/570 (66.49%), Query Frame = 0
Query: 2 NALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGAD-TRLYDAFL 61
+++ KL QIHA ++ G+ + L K V + S+ + + + F+
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 62 FNTLIRAYAQTGHSKPKALALYGLMLRDGIL-PNKFTYPFVLKACAGLEVLNLGQSVHGS 121
+NTLIR YA+ G+S A +LY M G++ P+ TYPF++KA + + LG+++H
Sbjct: 88 WNTLIRGYAEIGNS-ISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 122 VVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTE 181
V++ GF ++V+N+++H+Y+ C G + A K+FD+MP+ D V W+++I G+A G+P E
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 207
Query: 182 AVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALID 241
A++L+ EM + PD T+VS+LSAC +GAL LGK + Y+ + G+ + SN L+D
Sbjct: 208 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 267
Query: 242 MFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGS-GVAPDDV 301
++A+CG + +A LF M +K VSWTS+IVG+A++G G++AI LF+ M + G+ P ++
Sbjct: 268 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 327
Query: 302 AFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHS 361
F+G+L ACSH GMV+ G EYF M ++YK+ P+IEH+GCMVD+ R G VK+A E++ S
Sbjct: 328 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 387
Query: 362 MPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKK 421
MP++PN VI RTL+ AC HG+ L E Q+++ EP H +YVLLSN+YA W
Sbjct: 388 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 447
Query: 422 TKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYR 481
KIR+ M G+KKVPG +++E+ N ++EF+ GDKSH Q IY + EM ++ GY
Sbjct: 448 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 507
Query: 482 PSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFI 541
P S V +D+ EE+KE+ + HSEK+AIAF L++TP +PI +VKNLRVC+DCH A K +
Sbjct: 508 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 567
Query: 542 SKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
SK+Y+REI++RDR+RFHHFK G CSC D+W
Sbjct: 568 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of MS001308 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 497.3 bits (1279), Expect = 1.7e-140
Identity = 253/589 (42.95%), Postives = 372/589 (63.16%), Query Frame = 0
Query: 9 QIHAHILKLGLHNNPLVLTKFASI----------SSVINATDYAASFLFSA---GADTRL 68
QIH H+LKLG + V T S+ V + + + ++A G +R
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 69 Y--------------DAFLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVL 128
Y D +N +I YA+TG+ K +AL L+ M++ + P++ T V+
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK-EALELFKDMMKTNVRPDESTMVTVV 274
Query: 129 KACAGLEVLNLGQSVHGSVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDS 188
ACA + LG+ VH + GF ++ + N ++ +YS C G + A +F+ +P D
Sbjct: 275 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGLFERLPYKDV 334
Query: 189 VTWSAMIGGYARVGRPTEAVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAY 248
++W+ +IGGY + EA+ LF+EM + P+++TM+S+L AC LGA+++G+W+ Y
Sbjct: 335 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 394
Query: 249 IER--QGIQKPEEVSNALIDMFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQ 308
I++ +G+ + +LIDM+AKCGDI A ++F ++ K++ SW ++I G AMHGR
Sbjct: 395 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 454
Query: 309 DAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCM 368
+ LF M G+ PDD+ F+GLLSACSHSGM++ GR F +MT+ YK+ PK+EHYGCM
Sbjct: 455 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 514
Query: 369 VDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHE 428
+D+ +GL KEA E ++ M +EP+ VI +L+ AC+ HG +LGE + L++ EP +
Sbjct: 515 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 574
Query: 429 SNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFK 488
+YVLLSNIYA W + K R ++ KGMKKVPG + IEID+ ++EF+ GDK H + +
Sbjct: 575 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 634
Query: 489 EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPI 548
EIY M++EM ++K+G+ P TSEVL ++ EE KE L HSEKLAIAFGL++T PGT +
Sbjct: 635 EIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 694
Query: 549 RIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
IVKNLRVC +CH A+K ISKIY REII RDR RFHHF+ G+CSC D+W
Sbjct: 695 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of MS001308 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 496.9 bits (1278), Expect = 2.2e-140
Identity = 250/571 (43.78%), Postives = 378/571 (66.20%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLV--LTKFASISSVINATDYAASFLFSAGADTRLYDA 60
CN+L +L QI A+ +K + + V L F + S ++ Y A LF A ++ D
Sbjct: 39 CNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY-ARHLFEAMSEP---DI 98
Query: 61 FLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHG 120
+FN++ R Y++ + + +L+ +L DGILP+ +T+P +LKACA + L G+ +H
Sbjct: 99 VIFNSMARGYSRFTNPL-EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 158
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPT 180
+K G D +V+V T+++MY+ C ++ AR +FD + + V ++AMI GYAR RP
Sbjct: 159 LSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 218
Query: 181 EAVSLFREMQLAEVCPDEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALI 240
EA+SLFREMQ + P+EIT++SVLS+C LG+L+LGKW+ Y ++ K +V+ ALI
Sbjct: 219 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 278
Query: 241 DMFAKCGDISKALKLFKTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDV 300
DMFAKCG + A+ +F+ M K +W+++IV A HG+ + ++ +FE M V PD++
Sbjct: 279 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 338
Query: 301 AFIGLLSACSHSGMVERGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHS 360
F+GLL+ACSH+G VE GR+YFS M K+ +VP I+HYG MVD+ R G +++A EF+
Sbjct: 339 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 398
Query: 361 MPIEPNAVILRTLVSACRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKK 420
+PI P ++ R L++AC H L EK+++++ + H +YV+LSN+YA+ WE
Sbjct: 399 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYV 458
Query: 421 TKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYR 480
+R+VM+ + KVPG + IE++N ++EF +GD +++ +DEM +E+K SGY
Sbjct: 459 DSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYV 518
Query: 481 PSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKF 540
P TS V+ ++N+++KE TL HSEKLAI FGLLNTPPGT IR+VKNLRVC DCH+A+K
Sbjct: 519 PDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKL 578
Query: 541 ISKIYDREIIMRDRNRFHHFKAGICSCGDFW 569
IS I+ R++++RD RFHHF+ G CSCGDFW
Sbjct: 579 ISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of MS001308 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 476.1 bits (1224), Expect = 4.0e-134
Identity = 239/602 (39.70%), Postives = 369/602 (61.30%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYA--ASFLFSAGADTRLYDA 60
C+ +L QIHA +LK GL + +TKF S ++D+ A +F G D D
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD-GFDRP--DT 83
Query: 61 FLFNTLIRAYAQTGHSKPKALALYGLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHG 120
FL+N +IR ++ + + ++L LY ML N +T+P +LKAC+ L +H
Sbjct: 84 FLWNLMIRGFSCSDEPE-RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 143
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCAGGINFARKMFDEMPKSDSVTWSAMIGGYARVGR-- 180
+ K G++ DV+ N++++ Y+ G A +FD +P+ D V+W+++I GY + G+
Sbjct: 144 QITKLGYENDVYAVNSLINSYA-VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 203
Query: 181 -----------------------------PTEAVSLFREMQLAEVCPDEITMVSVLSACT 240
EA+ LF EMQ ++V PD +++ + LSAC
Sbjct: 204 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 263
Query: 241 DLGALELGKWLEAYIERQGIQKPEEVSNALIDMFAKCGDISKALKLFKTMSEKTIVSWTS 300
LGALE GKW+ +Y+ + I+ + LIDM+AKCG++ +AL++FK + +K++ +WT+
Sbjct: 264 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 323
Query: 301 VIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVERGREYFSSMTKKY 360
+I G A HG G++AI F EM G+ P+ + F +L+ACS++G+VE G+ F SM + Y
Sbjct: 324 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 383
Query: 361 KLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSACRGHGEFQLGEKI 420
L P IEHYGC+VD+ R GL+ EA F+ MP++PNAVI L+ ACR H +LGE+I
Sbjct: 384 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 443
Query: 421 TKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYE 480
+ L+ +P H YV +NI+A W+K + R +M+ +G+ KVPG + I ++ +E
Sbjct: 444 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 503
Query: 481 FVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLD-INEEDKEDTLNRHSEKLAI 540
F+AGD+SH + ++I M R+++++GY P E+LLD ++++++E +++HSEKLAI
Sbjct: 504 FLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAI 563
Query: 541 AFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKAGICSCGD 569
+GL+ T PGT IRI+KNLRVC DCH +K ISKIY R+I+MRDR RFHHF+ G CSCGD
Sbjct: 564 TYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD 620
BLAST of MS001308 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 476.1 bits (1224), Expect = 4.0e-134
Identity = 247/614 (40.23%), Postives = 368/614 (59.93%), Query Frame = 0
Query: 1 CNALPKLAQIHAHILKLGLHNNPLVLTKFASISSVINATDYAASFLFSAGADTRLYDAFL 60
C + L+QIHA +K G + L + + + + + F
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 61 FNTLIRAYAQTGHSKPK-ALALYGLMLRDGIL-PNKFTYPFVLKACAGLEVLNLGQSVHG 120
+NT+IR ++++ K A+ L+ M+ D + PN+FT+P VLKACA + G+ +HG
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 121 SVVKFGFDRDVHVRNTMVHMYSCCA----------------------------------- 180
+K+GF D V + +V MY C
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 181 ---------GGINFARKMFDEMPKSDSVTWSAMIGGYARVGRPTEAVSLFREMQLAEVCP 240
G AR +FD+M + V+W+ MI GY+ G +AV +FREM+ ++ P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 241 DEITMVSVLSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDMFAKCGDISKALKLF 300
+ +T+VSVL A + LG+LELG+WL Y E GI+ + + +ALIDM++KCG I KA+ +F
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 301 KTMSEKTIVSWTSVIVGMAMHGRGQDAICLFEEMIGSGVAPDDVAFIGLLSACSHSGMVE 360
+ + + +++W+++I G A+HG+ DAI F +M +GV P DVA+I LL+ACSH G+VE
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 361 RGREYFSSMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSA 420
GR YFS M L P+IEHYGCMVD+ R+GL+ EA EF+ +MPI+P+ VI + L+ A
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Query: 421 CRGHGEFQLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVP 480
CR G ++G+++ LM P YV LSN+YA +W + +++R M+ K ++K P
Sbjct: 453 CRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDP 512
Query: 481 GSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKE 540
G ++I+ID ++EFV D SH + KEI M+ E+ +++ +GYRP T++VLL++ EEDKE
Sbjct: 513 GCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKE 572
Query: 541 DTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRF 569
+ L+ HSEK+A AFGL++T PG PIRIVKNLR+C DCHS+ K ISK+Y R+I +RDR RF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022131416.1 | 0.0e+00 | 99.30 | pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia]... | [more] |
| XP_023537014.1 | 0.0e+00 | 92.62 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
| XP_038884201.1 | 0.0e+00 | 91.37 | pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida] | [more] |
| XP_023002279.1 | 1.7e-309 | 92.62 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >X... | [more] |
| XP_022951399.1 | 2.5e-308 | 91.92 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A8MQA3 | 6.6e-142 | 44.21 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
| Q9LN01 | 2.3e-139 | 42.95 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Q8LK93 | 3.0e-139 | 43.78 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
| Q9FI80 | 5.6e-133 | 40.23 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
| Q9FJY7 | 5.6e-133 | 39.70 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1BQ70 | 0.0e+00 | 99.30 | pentatricopeptide repeat-containing protein At4g21065-like OS=Momordica charanti... | [more] |
| A0A6J1KQ01 | 8.4e-310 | 92.62 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... | [more] |
| A0A6J1GHH7 | 1.2e-308 | 91.92 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata... | [more] |
| A0A5A7V9A4 | 2.1e-308 | 91.90 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3BC37 | 4.6e-308 | 91.73 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=36... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G21065.1 | 4.7e-143 | 44.21 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 1.7e-140 | 42.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G02980.1 | 2.2e-140 | 43.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G66520.1 | 4.0e-134 | 39.70 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G48910.1 | 4.0e-134 | 40.23 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
