MS001279 (gene) Bitter gourd (TR) v1

Overview


Name	MS001279
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	coiled-coil domain-containing protein 93 isoform X1
Location	scaffold36: 2900881 .. 2906158 (-)
RNA-Seq Expression	MS001279
Synteny	MS001279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCTTTCTTGTCATTTCCGGCATTAAGAACCAGAAGAAAGTTACAGTTGTGAAAGATTTGCAACTTTTACGAGAAAGATTCATTAAGGCTGATGCTGATCATGTGGTGCAGAATTTGATGTCATGCTCGAAGACTTTGGAGGTCTGCATCTTTGTTTTCTTCTTACAGTCTCATTTTATTGTTGAATTGTATTTGTCTCTCCAAACAATTCTTAACTGGTTTTCTATTCTAGGGGACTGAAGATTTTGTTATTTTCTCTATTTTAGTTGAATAGTGGTGGAAACTGAAGGACCATCTCTTTGGAAAAAATATGTTGAACATTTTCTGGATTCTTTGAAGTATATTTCTTCATTTAAATCAAAACAACTTTTTTCTGTTTAATAATAATCCTGGACAAATTCTCATTTATAAGATATAGTTCACCAATTTATTTTCTTTTTGCTTCATCAGATTTGTGCTTCGAAGCTTGTAACTATGTAAAGTATATAGCTTTTATTTCCAAAACATTTGTCATACTTGAAAATGAAATGGAACAACAGTCAGTACAGATTCTTTCTCGTCCATATCTTTTTACTTGGATATGGGGTTCTCTGATCACCAATTTACCACTTTGGCTCACCTAGGGTAAAATTTTTAAAAATTTTCTGATGGAGGCGTGGGCAAGCTTTCGTTTGCAAAATAATGATGCCAAACTTCTATTCAACTAAATATGTCTCATAAATTGATGCTGTAAGGGGTTTGGCTTGAAATTGTTATCATATAGATATGTTTCTTTTCATTTGTATTCTACAAAATAGTGTTTAATTGCATAATCACATGGTTAGCTGCAAACAAAATCAACTCGTGAATCATGTATCTTTTTTTTTTTCTTTTTTATTTTTGTATAATGGTTAAGATTGTTTAACCAATTTTCCTTTGTGTATAATAATGTTCTTTCAGTTTGAGAATTTTCAACCATTTTTACTTTCAACTTATCATTTTGTGTTTCTGATAAAAGAAAGTCTTTTGGCCTATTATCTGTTGGGTTTTGAATGCACCTGGGTTTGTTTCAGGATCTTGAAAAGCAGGAATCTAAATTCCTACATACCTGTAATGCGAAGCGTTATAAATTGCAAGATGAGATTATTGAGCTGGAGGGAAGACTAACAGAAGACCATGATTGCTCAAGTCTCTTAGATAGCTTAGATCATTTGATTAGTGAATCTCAGGAGGAATTGAATTCAGTAAAGAAGGTAAACTTTTTTTTTCTTTTTTTCTTTTTATTTTTTGGCTTAAAGCAGTTTTTATTTGTGTTCTTTTTTATGCATGAAAAATTCAAAATCAAGGCTTGAAGCCATTCCTCATGTTATGATTGATAACAATGCAAAAAATTGTCCACCACCCAACATTTCCTTGTTGGATCTGCATTATCTGTTTCGCATGAGATTTTGTCAACTCATTGATCAATTTATCTTGGATGTAACTGTGTATTTTGTCTTTTTGTAGGAACTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTTTGTTGTTCTCTTATTAGCCTTCTGTTTTTCCTTTAAAAATTATTTGGTTTCTCCATTGCATGATTGCATCATCTTCACTTTTTCTTGGTGATAATTGCATCATCTTCACTTCTTCTCAGTGATGGTTTTATTGTCTTCCCTTTTTCTTAGTTATAATTTTGAATTATTTGGCAAGTCCCAGCATAGCTTAGTATAAGGCACTTATTGCCATCAGTTCATGGTTCTAACCCTCACTCCTTGATTGTTGAACTAAAAAGAAAAGTTTGTAGTCCTTGGTGAACTTGGACACTTGCCCAGTTTTCTGCTAGCAGCTGATGTTTTCTTAAAAGTTTTAGCTCCAAAAAGGTAAAAATTAATAAAGTTTTTATGTGAAAATCATGATTGCTTTCCTGGTTAAATGGTTATGGCGGTTCTTCCACGAGCCTAATGCCTTGTGGCGAAAGATTATAGTAAGTATGGGCTACATCCGTTTGATTGGGTATCGACAGGTGGGGCTAGAGTAAGCAACTACAATCCCTGGAAGACTATTACTTTGGGTTTCCCTATTTTCTCTCATTCTTTACGTGTCTCTGTGGGGGAAGGTCTTAATACGTACTTCTGGGAGGATACTTGGATAGGCGACAAACCCTTCTGTCTTGCTTTCCCTCGGATCTACTTTCTATCTGATAAGAAACTCTTTTCAGTGGCCGAGGTTTTAAGTTCTGGAGAAGAGGGTTTGCCCATCTCTTTGGGGCTCACCCGTTCCTTGACTGATTGGGAATCGTCAGAGGTTTCCGATTTACTGGATCTGCTGTCTAGAGTTTCCTTATTTGATGGGAGGGAAGATGTGAGGGTGTGGACCCTCCATCATTCGAAAGGTTTTTCTTGTAGTTCTTTTTTCCATGTCTTGAATTCCTCGTCGTCCTCTTCTTCTTCTCCGCCCCTGTTGACCCCTTGGTTCACCTCTCTTTGGAAGATTAAAATTCCTAAGAAGATTAAGTTCTTTGGGTGGCAAGTCTTACTTGGAAAAGTTAATATTTTGGATTGGATCCAGAGGATGACCTCCCTTTGTTTGGGCCGCAGTGGTGTGTTATGTGTAGGAATGCTTCGGAGTATCTTGAGCATTTGTTGTGGTCTTGTCAGTTCGCGCAGGAGATATGGCTTTGTTTCTTTAGATGTTTTAGGATTGTTTGGGCCCGTTCCAGAGATTGTAGGGCGATGATGGAGGAAGTGTTGTTATCCCCCCCATTTCGTGACAAAGGGCGTTTTCTTTGGCAAGCGTGTTTTCTGGCTACTCTTTGAGGTATTTGGTAGGAGAGAAATAATAGAATTTTTAGGGGAGTGGAGAGATCTGTGGATTATGTGTGGGACCCCATTAACACTTCTCTATGGGGATCGGTCACTAAGGCTTTTTGTAATTATCAGTTAGGTGTCATTCTTTTGGATTGGAGCCCGTTTCTTTAGGGGTTTTCTGTTGCTGGGCTTTTTTTATATGCCCTCTTTTGTAGTTTTTTTTTCTTTTATCTCAATGAAAGTGCATTTTCTTATCCAAAAAAAAAAAAAAACGTGAAAATCATGATTTGAACCCAGGAATTTAAAGACAGATGAGTTTACATCTTGTCTCTTTGACCATTGGGGTAATGGCCATTCCATCACATGCCTTTGCAAGAGCTATGCGTTTTTTTTTCTCTCTCTCTTTTTTTCCCCTATTCTTTTTCCAACACTCATGGATTGCATAATGTTAAAGAAATTAAGTTCTTCATTGCACGTGGTAGTGTGGACACATTGTACTCGTTTGTTTATTTATTCCTCAACTCTGGCTTTTGAATTTCTAATTGTCTCTTCTATCGACCCAGAGATCTCTGAAATTCTTTTTTCTTCTTTCATGTTCACACGGGCACTTTGAAATACTTCTAAATATTTTGCATTTAGCTGAAAGTCATCCTCTTCTGATTCAATCTCAGTTTGCAGGTATGAGCGCCGTTTTTCGGAGCTATATATTAACATTCAGGTTCAAGAATTTTTATTCATGAATAATTGGTTCTTGTTGATTCATGTTATTTGTTAAACTTTTTACTGATAACGATATTTTACTCTTAAGCTAACGACGCACTATCATGCAGGATAAACTTAGACAAACACGCAGATACTATGCTACCTATAATGCACTTTTGGAGATTAAGGATCTGATGTTAAAGGAGACATCCTTATTGAAATCCATAAGTTCTCAGGTATATGACAGCTAAAAGGATACACATTGTCATTTGATTCTGTATCTATATGTTAAGAAACTATTTCCACGACTGCTTATGTGATGATGTCTCCAGTAGCGAAGGTATGTGGCATTTTCTTTTGATGAAGGGTGTAATAGGGATAATCCATCTTTCCGCTGCATGTTACTTTCTGTCTTTTTTTAGCTTTCAATTTGTTGCTTGACTTCATGCACATATATATGTATTCTCGCCTGGAGATATGGGAGGATATTTAGTCCTGAATCCTTTCATCGTTGGTAACCTTGTCAAAACTACTGTCATTGACTTGGTTACTATCACCCTCCCGTGCAAAAAATCGTGCTCCCACCTTACTCCAGTGTGGGTGTGAGGTTGGTCTTGCATTTACCCATATGCTACTCCCGTTTCATTTTAATTTTGAGTTGAGTGGGGAGTGAGGGGGGAGCTTTAATGTTCAAAACTTTCTGATAGCTTCAGTCTTTGTTATTATTTTCCTGCGCTAATTCATTGGTTTACCTTCACTTATGGCCACGTAGGATATGTATTGCGTTATGTTAGACATGATTACTGTGGATATAACTGAGATGTCATCAATAATTTTGCCTTTCTCTAGGCATTTGATAACATGTTTGGTGGCTAAGTTAGTAACTATGTTACTGATGTTCTTTTATAACTTTTGTAGTTTCAAGATGCCATAACCAGCCCCACAAGTCAAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAGGTAATTGTTTTTAAGATGGTTGAGCTTATGATATAAAAGGATGGTCTGACTTAAATGTTCAAAAGCCACGCTACCTAGGTTGATAATTCAAAGTGTCCTTCAAAATATTCTCTTATCTAGTTATTTATTTTGGAAATTTAAGGCAATTACCCCACCCACCCAAGCAAAGAATACCCGCATAATTCAAAGTGTTAATCTGCTCGGGTTGCAGTATTTTTATTTTGATACTAATGAAAATATTATTTTCTGTAGAAACTAGATAAGGTGGATCTCTCTCATCAAGCAGAGCAGCAGGCCTGCAATGCTTTGAAAGAGAAATATTCAGCAGCAACTTCAGAACAAAGACGTTGCTACACTCTCTTAAAAGCTTTTCAGGTGAGCAGCGTAGTGTTGTGAATGATATTATAGTTGCTATTTCTATAAGACTAGCTCAGGACTTACAATCTGTACTTTCTGTTGTGAATGATATTATAGTTGCTATTTCTATAAGACTAGCTCAGGACTTACAATCTGTACTTTCTTAAAAGGACGGTTCTTAGAAATGGACCCTCCTCCCCGGTGAGTCAGTTTGTTGAATAAGCAGAAACATTTAATTTGGCCGATCAGTTTCGATACATTGAGGTCCCCATAGAAGTATAACCCCTCTGGAACCACTGCTGTCCTTGCTTAATTTCTTCATTTTCCAGGAGGAATGTGCAAAGAACGAGAGGCTTCGGACCGAAAATTCCACA

mRNA sequence

ATGAATTTCTTTCTTGTCATTTCCGGCATTAAGAACCAGAAGAAAGTTACAGTTGTGAAAGATTTGCAACTTTTACGAGAAAGATTCATTAAGGCTGATGCTGATCATGTGGTGCAGAATTTGATGTCATGCTCGAAGACTTTGGAGGATCTTGAAAAGCAGGAATCTAAATTCCTACATACCTGTAATGCGAAGCGTTATAAATTGCAAGATGAGATTATTGAGCTGGAGGGAAGACTAACAGAAGACCATGATTGCTCAAGTCTCTTAGATAGCTTAGATCATTTGATTAGTGAATCTCAGGAGGAATTGAATTCAGTAAAGAAGGAACTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTATGAGCGCCGTTTTTCGGAGCTATATATTAACATTCAGGATAAACTTAGACAAACACGCAGATACTATGCTACCTATAATGCACTTTTGGAGATTAAGGATCTGATGTTAAAGGAGACATCCTTATTGAAATCCATAAGTTCTCAGTTTCAAGATGCCATAACCAGCCCCACAAGTCAAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAGAAACTAGATAAGGTGGATCTCTCTCATCAAGCAGAGCAGCAGGCCTGCAATGCTTTGAAAGAGAAATATTCAGCAGCAACTTCAGAACAAAGACGTTGCTACACTCTCTTAAAAGCTTTTCAGGAGGAATGTGCAAAGAACGAGAGGCTTCGGACCGAAAATTCCACA

Coding sequence (CDS)

ATGAATTTCTTTCTTGTCATTTCCGGCATTAAGAACCAGAAGAAAGTTACAGTTGTGAAAGATTTGCAACTTTTACGAGAAAGATTCATTAAGGCTGATGCTGATCATGTGGTGCAGAATTTGATGTCATGCTCGAAGACTTTGGAGGATCTTGAAAAGCAGGAATCTAAATTCCTACATACCTGTAATGCGAAGCGTTATAAATTGCAAGATGAGATTATTGAGCTGGAGGGAAGACTAACAGAAGACCATGATTGCTCAAGTCTCTTAGATAGCTTAGATCATTTGATTAGTGAATCTCAGGAGGAATTGAATTCAGTAAAGAAGGAACTCGCATCTAGATTGAGGGAAACACTAGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTATGAGCGCCGTTTTTCGGAGCTATATATTAACATTCAGGATAAACTTAGACAAACACGCAGATACTATGCTACCTATAATGCACTTTTGGAGATTAAGGATCTGATGTTAAAGGAGACATCCTTATTGAAATCCATAAGTTCTCAGTTTCAAGATGCCATAACCAGCCCCACAAGTCAAATGAAACTTATTGATTCCATGGAGGGAATTCTGAAAGGCATTCAACAGAAACTAGATAAGGTGGATCTCTCTCATCAAGCAGAGCAGCAGGCCTGCAATGCTTTGAAAGAGAAATATTCAGCAGCAACTTCAGAACAAAGACGTTGCTACACTCTCTTAAAAGCTTTTCAGGAGGAATGTGCAAAGAACGAGAGGCTTCGGACCGAAAATTCCACA

Protein sequence

MNFFLVISGIKNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQEECAKNERLRTENST

Homology

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BLAST of MS001279 vs. NCBI nr
Match: XP_022131907.1 (coiled-coil domain-containing protein 93 isoform X1 [Momordica charantia] >XP_022131908.1 coiled-coil domain-containing protein 93 isoform X1 [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 47  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 106

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 107 EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 166

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 167 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 226

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 227 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 286

Query: 252 FQEECAKNERLRTENST 269
           FQEEC KNERLRTENST
Sbjct: 287 FQEECVKNERLRTENST 303

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BLAST of MS001279 vs. NCBI nr
Match: XP_022131911.1 (coiled-coil domain-containing protein 93 isoform X3 [Momordica charantia] >XP_022131912.1 coiled-coil domain-containing protein 93 isoform X3 [Momordica charantia])

HSP 1 Score: 471.1 bits (1211), Expect = 6.4e-129
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 191

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 192 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 251

Query: 252 FQEECAKNERLRTENST 269
           FQEEC KNERLRTENST
Sbjct: 252 FQEECVKNERLRTENST 268

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BLAST of MS001279 vs. NCBI nr
Match: XP_022131909.1 (coiled-coil domain-containing protein 93 isoform X2 [Momordica charantia] >XP_022131910.1 coiled-coil domain-containing protein 93 isoform X2 [Momordica charantia])

HSP 1 Score: 444.9 bits (1143), Expect = 4.9e-121
Identity = 238/243 (97.94%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 47  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 106

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 107 EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 166

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 167 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 226

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 227 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 286

Query: 252 FQE 255
           FQ+
Sbjct: 287 FQD 289

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BLAST of MS001279 vs. NCBI nr
Match: XP_038885587.1 (coiled-coil domain-containing protein 93 isoform X3 [Benincasa hispida])

HSP 1 Score: 410.6 bits (1054), Expect = 1.0e-110
Identity = 224/268 (83.58%), Postives = 241/268 (89.93%), Query Frame = 0


Query: 1   MNFFLVISGIKNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLH 60
           MNF L+ISGIKNQKKV++VKDLQLL++R  K DA +VVQNL+SC KTLEDL KQES+FL 
Sbjct: 9   MNFSLIISGIKNQKKVSIVKDLQLLQDRVNKVDA-NVVQNLISCLKTLEDLGKQESEFLS 68

Query: 61  TCNAKRYKLQDEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLA 120
           TCN+KR KLQDEIIELEGRLT  H+CS+ LDSLD LI ES+EELNSVKK L S LRETLA
Sbjct: 69  TCNSKRSKLQDEIIELEGRLTGYHECSNFLDSLDDLIRESEEELNSVKKALTSSLRETLA 128

Query: 121 LKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLK 180
           LKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRR+YATYNALLEIKDLMLKETSLL 
Sbjct: 129 LKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRFYATYNALLEIKDLMLKETSLLN 188

Query: 181 SISSQFQDAITSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATS 240
           SISSQFQDAI S TSQ KLIDSMEGILKGIQ KLDKV LSHQ EQQ CNALKEKY+ AT+
Sbjct: 189 SISSQFQDAIASSTSQTKLIDSMEGILKGIQLKLDKVHLSHQEEQQVCNALKEKYAVATA 248

Query: 241 EQRRCYTLLKAFQEECAKNERLRTENST 269
           EQRRCYTLLKAFQEECAKNE+LRT+N T
Sbjct: 249 EQRRCYTLLKAFQEECAKNEKLRTQNFT 275

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BLAST of MS001279 vs. NCBI nr
Match: KGN63142.2 (hypothetical protein Csa_022052 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 3.7e-108
Identity = 220/266 (82.71%), Postives = 238/266 (89.47%), Query Frame = 0


Query: 1   MNFFLVISGIKNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLH 60
           MNFFLV+S IKNQKKV VVKDLQLLR+R  KADA +VVQNLMSC KT EDL KQES+F+ 
Sbjct: 1   MNFFLVLSVIKNQKKVAVVKDLQLLRDRVDKADA-NVVQNLMSCLKTWEDLGKQESEFMS 60

Query: 61  TCNAKRYKLQDEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLA 120
           TCN+KR +LQDEIIEL GRLTEDH+C +  DSLD LIS S+EEL+SVKK LA  +RETLA
Sbjct: 61  TCNSKRSELQDEIIELGGRLTEDHECLNFFDSLDDLISASEEELDSVKKALALSVRETLA 120

Query: 121 LKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLK 180
           LKRLLDDVPTQTELIQYERRFSELY NIQDKLRQTRRYYATYNALLEIKDLMLKETSLL 
Sbjct: 121 LKRLLDDVPTQTELIQYERRFSELYTNIQDKLRQTRRYYATYNALLEIKDLMLKETSLLN 180

Query: 181 SISSQFQDAITSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATS 240
           SISSQFQDAI S  S+MKLIDSM GILKGIQQKL+KV LSHQ EQQ CNALKEKY+AAT+
Sbjct: 181 SISSQFQDAIASSASKMKLIDSMVGILKGIQQKLNKVHLSHQEEQQVCNALKEKYAAATA 240

Query: 241 EQRRCYTLLKAFQEECAKNERLRTEN 267
           EQRRCYTLLKAFQEECAKNE+LRT+N
Sbjct: 241 EQRRCYTLLKAFQEECAKNEKLRTQN 265

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BLAST of MS001279 vs. ExPASy Swiss-Prot
Match: Q640U7 (Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis OX=8364 GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.1e-26
Identity = 78/243 (32.10%), Postives = 130/243 (53.50%), Query Frame = 0


Query: 20  KDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIELEGR 79
           ++L +L     KAD   V+Q L       E L+ QE +F   C  +  +LQ  I  L+  
Sbjct: 360 QELSVLENMESKADPS-VLQKLRDLVAQNESLKAQEQQFRSKCREEMSRLQQNIDGLKAA 419

Query: 80  LTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTELIQYER 139
            TE  +      + +      +E+L  ++  LA R RE   L+R +D+VP++ EL QY++
Sbjct: 420 ATEHGEEKEQTQAFEQQYKAEREKLQKIRLLLARRNREIAILQRKIDEVPSRAELTQYQK 479

Query: 140 RFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSPTSQMKL 199
           RF ELY  +    ++T++++  YN L + K  + KE +LL SI   FQ A+ SP+++ + 
Sbjct: 480 RFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSIHDNFQQAMASPSARDQF 539

Query: 200 IDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQEECAKN 259
           +  ME I+ GI+Q  +K++   Q  +   + L ++Y     +QR  +  +K F+EEC KN
Sbjct: 540 LRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQRLYFKTVKEFKEECRKN 599

Query: 260 ERL 263
           E L
Sbjct: 600 ETL 601

[Close]

BLAST of MS001279 vs. ExPASy Swiss-Prot
Match: Q5ZKI4 (Coiled-coil domain-containing protein 93 OS=Gallus gallus OX=9031 GN=CCDC93 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.9e-25
Identity = 78/243 (32.10%), Postives = 130/243 (53.50%), Query Frame = 0


Query: 21  DLQLLRERFIKADAD-HVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIELEGR 80
           D +L     I++ AD  V+QNL       E+L+ QE +F   C  +  +LQ +I  L+  
Sbjct: 366 DKELAALETIESQADSSVLQNLRMLVAINENLKSQEQEFKAHCREEMERLQQDIENLKAE 425

Query: 81  LTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTELIQYER 140
             E+ +       +D      +E+L  ++  LA R RE   L+R +D+VP++ EL QY++
Sbjct: 426 AAENGEEEEPNKLIDQQYQTEKEKLQKIRLLLARRNREIAILQRKIDEVPSRAELTQYQK 485

Query: 141 RFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSPTSQMKL 200
           RF ELY  +    ++T++++  YN L + K  + KE +LL SI   F  A+ S  S+ + 
Sbjct: 486 RFIELYSQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSIHDNFHQAMASSGSREQF 545

Query: 201 IDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQEECAKN 260
           +  ME I++GI+Q   K++   Q  +   + L ++Y     +QR  +  +K F+EEC KN
Sbjct: 546 LRQMEQIVEGIKQNRMKMEKKKQENKMRRDQLNDEYLELLEKQRLYFKTVKEFKEECRKN 605

Query: 261 ERL 263
           E L
Sbjct: 606 EML 608

[Close]

BLAST of MS001279 vs. ExPASy Swiss-Prot
Match: Q6GQI5 (Coiled-coil domain-containing protein 93 OS=Xenopus laevis OX=8355 GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.0e-25
Identity = 77/246 (31.30%), Postives = 131/246 (53.25%), Query Frame = 0


Query: 20  KDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIELEGR 79
           ++L +L +   KAD   V+Q L       E L+ QE +F   C  +  +LQ  I  L+  
Sbjct: 359 QELLVLEKVESKADPS-VLQKLRDLVAQNESLKLQEQQFRSKCREEMSRLQQNIDSLKAA 418

Query: 80  LTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTELIQYER 139
            TE  +      + +      +E+L  ++  LA R RE   L R +D+VP++ EL QY++
Sbjct: 419 ATEHGEEKEQSQAFEQQYKAEKEKLQKIRLLLARRNREIAILHRKIDEVPSRAELTQYQK 478

Query: 140 RFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSPTSQMKL 199
           RF ELY  +    ++T++++  YN L + K  + KE +LL S+   FQ A+ SP+ + + 
Sbjct: 479 RFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSVHDNFQQAMASPSVRDQF 538

Query: 200 IDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQEECAKN 259
           +  ME I+ GI+Q  +K++   Q  +   + L ++Y     +QR  +  +K F+EEC +N
Sbjct: 539 LRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQRLYFKTVKEFREECRRN 598

Query: 260 ERLRTE 266
           E L T+
Sbjct: 599 ETLLTK 603

[Close]

BLAST of MS001279 vs. ExPASy Swiss-Prot
Match: Q54CV3 (Coiled-coil domain-containing protein 93 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292680 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 75/228 (32.89%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 38  VQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIEL---EGRLTEDHDCSSLLDSLD 97
           +Q L S     E L  QE  F  +C  +  + + +I +L   +    ED   S     + 
Sbjct: 404 LQALRSLVLLNETLIAQEELFKQSCKRQMVEYKQKIEQLLSQDASTQEDLQDSDRQQQIQ 463

Query: 98  HLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQ 157
                   +L  +K  L  + R+   ++R LD++P++ EL+QY+R+F EL      KL +
Sbjct: 464 QAFDSDIGKLKKLKLLLNKKNRDISLIQRYLDELPSRAELLQYQRQFVELSEQSSSKLTE 523

Query: 158 TRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSPTSQMKLIDSMEGILKGIQQKL 217
           TR+YY TYN   + K L+  E S+L SI S++  A++S  ++   I SM+ I+ GIQQ L
Sbjct: 524 TRQYYTTYNTFEDKKTLLENELSILNSIQSKYSIAMSSTNNKELFIKSMDQIIDGIQQVL 583

Query: 218 DKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQEECAKNERL 263
           DK +     E+   + L ++Y     ++R  Y L K F+EEC KNE L
Sbjct: 584 DKSENKWNVEKVRHDTLSDQYMTLLDQERNYYKLTKDFEEECRKNELL 631

[Close]

BLAST of MS001279 vs. ExPASy Swiss-Prot
Match: Q567U6 (Coiled-coil domain-containing protein 93 OS=Homo sapiens OX=9606 GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 5.5e-22
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 0


Query: 30  IKADAD-HVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQDEIIELEGRLTEDHDCSS 89
           I++ AD  ++QNL +     E+L+ QE +F   C  +  +LQ EI  L+       D  +
Sbjct: 374 IESKADPSILQNLRALVAMNENLKSQEQEFKAHCREEMTRLQQEIENLKAERAPRGDEKT 433

Query: 90  LL---------------DSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQTE 149
           L                + LD   +  +E+L  ++   A R RE   L R +D+VP++ E
Sbjct: 434 LSSGEPPGTLTSAMTHDEDLDRRYNMEKEKLYKIRLLQARRNREIAILHRKIDEVPSRAE 493

Query: 150 LIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAITSP 209
           LIQY++RF ELY  I    ++T++++  YN L + K  + KE SLL SI   F  A+ SP
Sbjct: 494 LIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASP 553

Query: 210 TSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKAFQ 263
            ++ + +  ME I++GI+Q   K++   Q  +   + L ++Y     +QR  +  +K F+
Sbjct: 554 AARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFK 613

[Close]

BLAST of MS001279 vs. ExPASy TrEMBL
Match: A0A6J1BQS7 (coiled-coil domain-containing protein 93 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111004933 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 191

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 192 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 251

Query: 252 FQEECAKNERLRTENST 269
           FQEEC KNERLRTENST
Sbjct: 252 FQEECVKNERLRTENST 268

[Close]

BLAST of MS001279 vs. ExPASy TrEMBL
Match: A0A6J1BSB1 (coiled-coil domain-containing protein 93 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004933 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 47  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 106

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 107 EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 166

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 167 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 226

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 227 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 286

Query: 252 FQEECAKNERLRTENST 269
           FQEEC KNERLRTENST
Sbjct: 287 FQEECVKNERLRTENST 303

[Close]

BLAST of MS001279 vs. ExPASy TrEMBL
Match: A0A6J1BQZ9 (coiled-coil domain-containing protein 93 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004933 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.4e-121
Identity = 238/243 (97.94%), Postives = 240/243 (98.77%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD
Sbjct: 47  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 106

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ
Sbjct: 107 EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 166

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDKLRQTRRYYATYNA LEIKDLMLKETSLLKSISSQFQDAIT
Sbjct: 167 TELIQYERRFSELYINIQDKLRQTRRYYATYNAHLEIKDLMLKETSLLKSISSQFQDAIT 226

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           SPTSQMKLIDSMEGILKGI QKLDKVDLS +AEQQACNALKEKYSAATSEQRRCYTLLKA
Sbjct: 227 SPTSQMKLIDSMEGILKGILQKLDKVDLSREAEQQACNALKEKYSAATSEQRRCYTLLKA 286

Query: 252 FQE 255
           FQ+
Sbjct: 287 FQD 289

[Close]

BLAST of MS001279 vs. ExPASy TrEMBL
Match: A0A6J1EPR3 (coiled-coil domain-containing protein 93 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436260 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.8e-106
Identity = 214/258 (82.95%), Postives = 232/258 (89.92%), Query Frame = 0


Query: 11  KNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQ 70
           +NQKKV VVKDLQ L++R  KA+A+HVVQNLMSC KTLEDL KQES+ L  C+A+R KLQ
Sbjct: 8   QNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQ 67

Query: 71  DEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPT 130
            EI ELEGRLT DH+ S+ LDSLD+ ISES+EELNSVKK LASRLRETLALKRLLDDVPT
Sbjct: 68  AEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPT 127

Query: 131 QTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAI 190
           QTELIQYERRFSELYINIQDK RQTRRYYATYNALLEIKDLMLKETSLL SISSQFQDAI
Sbjct: 128 QTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAI 187

Query: 191 TSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLK 250
            +  SQMKLI+SMEGILKGIQQKLDKV LSHQ EQQ CNALKEKY+AAT+EQRRCY LLK
Sbjct: 188 ANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLK 247

Query: 251 AFQEECAKNERLRTENST 269
           AFQEECAKNE+LRT+NST
Sbjct: 248 AFQEECAKNEKLRTQNST 265

[Close]

BLAST of MS001279 vs. ExPASy TrEMBL
Match: A0A6J1EP31 (coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436260 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.3e-106
Identity = 214/257 (83.27%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 12  NQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQD 71
           NQKKV VVKDLQ L++R  KA+A+HVVQNLMSC KTLEDL KQES+ L  C+A+R KLQ 
Sbjct: 46  NQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQA 105

Query: 72  EIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPTQ 131
           EI ELEGRLT DH+ S+ LDSLD+ ISES+EELNSVKK LASRLRETLALKRLLDDVPTQ
Sbjct: 106 EIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPTQ 165

Query: 132 TELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAIT 191
           TELIQYERRFSELYINIQDK RQTRRYYATYNALLEIKDLMLKETSLL SISSQFQDAI 
Sbjct: 166 TELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA 225

Query: 192 SPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLKA 251
           +  SQMKLI+SMEGILKGIQQKLDKV LSHQ EQQ CNALKEKY+AAT+EQRRCY LLKA
Sbjct: 226 NSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLKA 285

Query: 252 FQEECAKNERLRTENST 269
           FQEECAKNE+LRT+NST
Sbjct: 286 FQEECAKNEKLRTQNST 302

[Close]

BLAST of MS001279 vs. TAIR 10
Match: AT4G32560.1 (paramyosin-related )

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 142/257 (55.25%), Postives = 183/257 (71.21%), Query Frame = 0


Query: 11  KNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQ 70
           +NQ+K      LQ LRER  K   D  VQ L+   ++L++  K+ES+    CN KR  L+
Sbjct: 44  QNQRKCDAKDKLQQLRERISKEVVDVSVQELIPLLRSLKEFVKEESEVRSRCNVKRSALE 103

Query: 71  DEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPT 130
           D + +LE R  +  D     + LD L+  S + L S KKEL + LRE ++LKR +DDVP 
Sbjct: 104 DAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLTSAKKELGATLREIVSLKRQIDDVPC 163

Query: 131 QTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAI 190
           Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNALLEIKDLMLKETSLL SI SQFQD I
Sbjct: 164 QSELLQYERRFSELNVCIQEKLQQTRKLYATYNALLEIKDLMLKETSLLNSIGSQFQDVI 223

Query: 191 TSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLK 250
            +P  ++KLIDSMEG++KGIQQK+ K+ L  Q EQ+  +A KEKY AA +EQR+CYT+L+
Sbjct: 224 GTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQRLRDASKEKYIAAAAEQRKCYTVLR 283

Query: 251 AFQEECAKNERLRTENS 268
           A+QEEC KNERLR+  S
Sbjct: 284 AYQEECTKNERLRSHIS 300

[Close]

BLAST of MS001279 vs. TAIR 10
Match: AT4G32560.2 (paramyosin-related )

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 142/257 (55.25%), Postives = 183/257 (71.21%), Query Frame = 0


Query: 11  KNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKLQ 70
           +NQ+K      LQ LRER  K   D  VQ L+   ++L++  K+ES+    CN KR  L+
Sbjct: 44  QNQRKCDAKDKLQQLRERISKEVVDVSVQELIPLLRSLKEFVKEESEVRSRCNVKRSALE 103

Query: 71  DEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVPT 130
           D + +LE R  +  D     + LD L+  S + L S KKEL + LRE ++LKR +DDVP 
Sbjct: 104 DAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLTSAKKELGATLREIVSLKRQIDDVPC 163

Query: 131 QTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDAI 190
           Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNALLEIKDLMLKETSLL SI SQFQD I
Sbjct: 164 QSELLQYERRFSELNVCIQEKLQQTRKLYATYNALLEIKDLMLKETSLLNSIGSQFQDVI 223

Query: 191 TSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLLK 250
            +P  ++KLIDSMEG++KGIQQK+ K+ L  Q EQ+  +A KEKY AA +EQR+CYT+L+
Sbjct: 224 GTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQRLRDASKEKYIAAAAEQRKCYTVLR 283

Query: 251 AFQEECAKNERLRTENS 268
           A+QEEC KNERLR+  S
Sbjct: 284 AYQEECTKNERLRSHIS 300

[Close]

BLAST of MS001279 vs. TAIR 10
Match: AT4G32560.3 (paramyosin-related )

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 142/258 (55.04%), Postives = 183/258 (70.93%), Query Frame = 0


Query: 10  IKNQKKVTVVKDLQLLRERFIKADADHVVQNLMSCSKTLEDLEKQESKFLHTCNAKRYKL 69
           +K Q+K      LQ LRER  K   D  VQ L+   ++L++  K+ES+    CN KR  L
Sbjct: 41  VKEQRKCDAKDKLQQLRERISKEVVDVSVQELIPLLRSLKEFVKEESEVRSRCNVKRSAL 100

Query: 70  QDEIIELEGRLTEDHDCSSLLDSLDHLISESQEELNSVKKELASRLRETLALKRLLDDVP 129
           +D + +LE R  +  D     + LD L+  S + L S KKEL + LRE ++LKR +DDVP
Sbjct: 101 EDAVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLTSAKKELGATLREIVSLKRQIDDVP 160

Query: 130 TQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLKSISSQFQDA 189
            Q+EL+QYERRFSEL + IQ+KL+QTR+ YATYNALLEIKDLMLKETSLL SI SQFQD 
Sbjct: 161 CQSELLQYERRFSELNVCIQEKLQQTRKLYATYNALLEIKDLMLKETSLLNSIGSQFQDV 220

Query: 190 ITSPTSQMKLIDSMEGILKGIQQKLDKVDLSHQAEQQACNALKEKYSAATSEQRRCYTLL 249
           I +P  ++KLIDSMEG++KGIQQK+ K+ L  Q EQ+  +A KEKY AA +EQR+CYT+L
Sbjct: 221 IGTPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQRLRDASKEKYIAAAAEQRKCYTVL 280

Query: 250 KAFQEECAKNERLRTENS 268
           +A+QEEC KNERLR+  S
Sbjct: 281 RAYQEECTKNERLRSHIS 298

The following BLAST results are available for this feature:

BLAST of MS001279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131907.1	6.4e-129	98.05	coiled-coil domain-containing protein 93 isoform X1 [Momordica charantia] >XP_02...	[more]
XP_022131911.1	6.4e-129	98.05	coiled-coil domain-containing protein 93 isoform X3 [Momordica charantia] >XP_02...	[more]
XP_022131909.1	4.9e-121	97.94	coiled-coil domain-containing protein 93 isoform X2 [Momordica charantia] >XP_02...	[more]
XP_038885587.1	1.0e-110	83.58	coiled-coil domain-containing protein 93 isoform X3 [Benincasa hispida]	[more]
KGN63142.2	3.7e-108	82.71	hypothetical protein Csa_022052 [Cucumis sativus]	[more]

BLAST of MS001279 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q640U7	8.1e-26	32.10	Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis OX=8364 GN=ccdc93...	[more]
Q5ZKI4	6.9e-25	32.10	Coiled-coil domain-containing protein 93 OS=Gallus gallus OX=9031 GN=CCDC93 PE=2...	[more]
Q6GQI5	9.0e-25	31.30	Coiled-coil domain-containing protein 93 OS=Xenopus laevis OX=8355 GN=ccdc93 PE=...	[more]
Q54CV3	1.9e-22	32.89	Coiled-coil domain-containing protein 93 homolog OS=Dictyostelium discoideum OX=...	[more]
Q567U6	5.5e-22	31.73	Coiled-coil domain-containing protein 93 OS=Homo sapiens OX=9606 GN=CCDC93 PE=1 ...	[more]

BLAST of MS001279 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQS7	3.1e-129	98.05	coiled-coil domain-containing protein 93 isoform X3 OS=Momordica charantia OX=36...	[more]
A0A6J1BSB1	3.1e-129	98.05	coiled-coil domain-containing protein 93 isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1BQZ9	2.4e-121	97.94	coiled-coil domain-containing protein 93 isoform X2 OS=Momordica charantia OX=36...	[more]
A0A6J1EPR3	4.8e-106	82.95	coiled-coil domain-containing protein 93 isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EP31	6.3e-106	83.27	coiled-coil domain-containing protein 93 isoform X1 OS=Cucurbita moschata OX=366...	[more]

BLAST of MS001279 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32560.1	1.7e-66	55.25	paramyosin-related	[more]
AT4G32560.2	1.7e-66	55.25	paramyosin-related	[more]
AT4G32560.3	1.7e-66	55.04	paramyosin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	COILS	Coil	Coil	coord: 90..117
None	No IPR available	PANTHER	PTHR16441:SF0	COILED-COIL DOMAIN-CONTAINING PROTEIN 93	coord: 12..267
IPR039116	Coiled-coil domain-containing protein 93	PANTHER	PTHR16441	FIDIPIDINE	coord: 12..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001279.1	MS001279.1	mRNA