MS001264 (gene) Bitter gourd (TR) v1

Overview


Name	MS001264
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	selenoprotein H
Location	scaffold36: 2753748 .. 2756814 (-)
RNA-Seq Expression	MS001264
Synteny	MS001264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGAAGAAGCGAACAGCGAAGCAAGAAGATGAGCCGGCGGCGGCGGCGGCAGCCAAGCCTGCTCCGACGTCATCGAGGGTAACCCGGAGTTCGGCCCGGCTGGCGGCGAACTCGAAGGCCGGTGGGCCTGTGCCGGAGTTGCCGGTGAGGAAGAAGCCGAAGCGTGCTCAGAAGGAAAATGGGAAGCCGGAGGCGGAGGAGGTCGAGACTGAGAAAGAGGAAGTGGAAGTTGGTGCTGCTTCGGAGAAACTTGGCGGCGAGGATGCGATGAACAGAACCGTTGTGATTGAACATTGGTGAGTTCCTTATTTTGTGTATTTTGATTGGTTTCTCGGAAATCGTCAGGAAAATTGAAAGTAGGTTAAGTTGATTTGAAGTTGAAGTTGAACACTTGAACTTTCAAGGGTTTGAGATGCTCGATTACTTTCTGGTTCGATATTCCCCGCCAAATGTGGTTTTCACATTTAGGGTTTCGCTGGATAATCGATCAGGGCCTCCAATCCGTAGGGTAAACATTTTGACCCATATTGCATTGTTCTTGTGCCGCTCTACCGTCTCCTATGGCTTCCTGTATTCTCAGTTCTCTTCATTCAAGTTAAATGTGTTTTTATAGAGTTCTCAAGTTACAGAGAACTACGAAATGAAGAAGAATGGAGAAGGATTATAAGAGAAGCAGCAATGGGAGATGGCGGGGGAAGATGGTGTAGGATTTAAGGAATATACATGAAATGGTGGAAGTTTTTGCATTCTTACTCATAATACTCTTGGAGGGTCGATTATTGTTTGCTTATTTCGTTGGCATACTTTTGAAGTTGAATACTCTTGCTGGGGTAGAGGGAAAAATTTTCATTAGAGGAGCCAACTTTGAGAGGCAAATTAGAGGAAAACTTTATTATCTTAGTTCCGTGTATGTATTTTTTGGTAATCCAAGACAATTTAAGGGGCACCTGCCCCTCCTTGGTTATTGTCTCTGTATTCTTCTGCCTTTTTCATGTCCTGCTCAGTGTTTATATTAAGACACTTTTCAGTTTTCCCCTTAATTTTGTTCTCTTGTAGCAAACAGTGCCAATCGTTCAAGAAAAGGGCCATCGAGGTGCAGAATGGTCTAGAGACTGGTGTTCCTGGCATCACTGTGCTGGTCAACCCTGATAAGGTATCCTTTTGACATCTTTAACTTTCATATGCTATTCTAAAGAGCAGAACTATTCATGGTTCTCTGTTCTCTTATCCCAGTATAATCACAATTTGTGCACGATAATGGTTAGTTGATTTGATTCTCTTTTGAGTTTGTTCTTTGTCTTCCATCTTGTGGAAGGTGGAGGTTATAGTTTCCAAGCATTTCCAGTTTAGTTTTCAAGCTCACATGTTCTCTGTAGGGGCAGAGTCACATTGAGACAGGGAAACCCCTGGTTCTTTAATTTCTGAACTTGCATTGAGTTATATATACACACACACAGTAGTATTAAAGGTCATAAGAGTTGTGATTGTTAGGAGAGTGTAAACAAAGTTTTACGCTAAAGAAGGGATGATCCATAGTATATATAGGTGAAGATAATTATCTCTGTACAAGATATTTTGGATGGAATCAAAAGCAAAGTTATGAGAATTATTTCTATAGTGGACAATATCATATCATTGTAGAGATACTTGGGGGACTCTTGTCTAAACCCAGTCATGTGGGGGAAATCCTCAAAGACAAAACAAAAATGATTTAGTGAGCCTTATAATCATTACAGACTTGTGGATGAACTCGAAGAGGTTCCTTTGTTCGAGGTAAAGAGATCCCAAGGGTATGACTTGTGGTCAACATCTTGTTCCTACATTGTTATTTGTGTAGCTGTGCTTTATCTAAACATTTTGGATAAGTGCAAGCTCTTGTTGTCAATTAGGAGTAGACGAGAGACCTTTGTTGTTAGTCAAGAGTTGACTCTCAGACTCTCATGTTGGGTAGGATTGTTAGAGTTGCAAAGAGTGCAAACAAGATTATTAGAGTAACAAAGAGTGAAAATAAAGTTCTGCATTGGCTATGAAAATGGGCGATCTATGGTATATAAGCAAGAACAATTCCATCCATTGGTATGAGGCACTCAAAGGAACATGTCATCGAAGAGTTTCCAACATTCATTCTCGAGCGAGGTGTGAGTTCAAGACCAAAGAAAGCCAGAGCATCTCTTCCTTTTCGCCTTGCCTCGAGGGCTTACGGGTTCGTGGGCACAGTTGAAAAAGATGTGTCTGTCAAGTTCGGTTCTTCTTAGTTGGGTTGGGCCGGTTCGACCAGAAATGCTATGTTTCTTTCCTCCCCACATCGATAGAAGTAGATAAACGGGGTATTAGGAGTCTTTGATTTGATATTTTCCTGTTGCTGCACGAGGAGGGACAACTTGAGTTTTCATTTTTAGGGCTCAGGTTTTGAACTTCGTACTACCTCAAAAAACGAAAACCAATGAAGGCATTAGAATTCTCACTTTGATTTTCTTAGTTAATAGTGGTAGTGGGGTATGTGAAAACAAGCAAGGGACTTTGGGGAAAAGAGCTGAAATCATACACTGGACACCTCCCTAAGGTATTACAATTCTAAGAATTTCTTTCTAAGATATTGAAATTTAGACTGCATATTTTGTATCTAATTGAAGTTTAGTTTTACTCACATGGATTTTATCATTTCATTGGAAGAGATTGCTATAAATCAGTGAATTTTGTGCCGTACACTGAAAAGTATATAGGTTTTTTTTTCTCCCTTCTGAATAAAGAAAACTGATATGTTTGTTTAATGAAATTATATATATATATTTCCTCCTCGTTTTGCTATTTTTTTTAATAATAATTATGCAGCCAAGAAGAGGATGCTTTGAAATACGGAGTGGAGATGGCGAGAAGTTTATCAGCCTTCTGGTAATTATTGGCTTGAGTCGAGTCCTACACTCCTCAAACGATCGATAAAGTGAAAGTTCACTTATAATTTCTTACCTTCCATTTACAGGACATGAAGCGACCGTTTACTCGTATGAAGGAGCTCGACATGGGGAAAGTAATTTCGGATATTGTTGAGAAGATAAAAGGA

mRNA sequence

ATGGCGCCGAAGAAGCGAACAGCGAAGCAAGAAGATGAGCCGGCGGCGGCGGCGGCAGCCAAGCCTGCTCCGACGTCATCGAGGGTAACCCGGAGTTCGGCCCGGCTGGCGGCGAACTCGAAGGCCGGTGGGCCTGTGCCGGAGTTGCCGGTGAGGAAGAAGCCGAAGCGTGCTCAGAAGGAAAATGGGAAGCCGGAGGCGGAGGAGGTCGAGACTGAGAAAGAGGAAGTGGAAGTTGGTGCTGCTTCGGAGAAACTTGGCGGCGAGGATGCGATGAACAGAACCGTTGTGATTGAACATTGCAAACAGTGCCAATCGTTCAAGAAAAGGGCCATCGAGGTGCAGAATGGTCTAGAGACTGGTGTTCCTGGCATCACTGTGCTGGTCAACCCTGATAAGCCAAGAAGAGGATGCTTTGAAATACGGAGTGGAGATGGCGAGAAGTTTATCAGCCTTCTGGACATGAAGCGACCGTTTACTCGTATGAAGGAGCTCGACATGGGGAAAGTAATTTCGGATATTGTTGAGAAGATAAAAGGA

Coding sequence (CDS)

ATGGCGCCGAAGAAGCGAACAGCGAAGCAAGAAGATGAGCCGGCGGCGGCGGCGGCAGCCAAGCCTGCTCCGACGTCATCGAGGGTAACCCGGAGTTCGGCCCGGCTGGCGGCGAACTCGAAGGCCGGTGGGCCTGTGCCGGAGTTGCCGGTGAGGAAGAAGCCGAAGCGTGCTCAGAAGGAAAATGGGAAGCCGGAGGCGGAGGAGGTCGAGACTGAGAAAGAGGAAGTGGAAGTTGGTGCTGCTTCGGAGAAACTTGGCGGCGAGGATGCGATGAACAGAACCGTTGTGATTGAACATTGCAAACAGTGCCAATCGTTCAAGAAAAGGGCCATCGAGGTGCAGAATGGTCTAGAGACTGGTGTTCCTGGCATCACTGTGCTGGTCAACCCTGATAAGCCAAGAAGAGGATGCTTTGAAATACGGAGTGGAGATGGCGAGAAGTTTATCAGCCTTCTGGACATGAAGCGACCGTTTACTCGTATGAAGGAGCTCGACATGGGGAAAGTAATTTCGGATATTGTTGAGAAGATAAAAGGA

Protein sequence

MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG

Homology

[Close]

BLAST of MS001264 vs. NCBI nr
Match: XP_022132303.1 (uncharacterized protein LOC111005187 [Momordica charantia])

HSP 1 Score: 330.9 bits (847), Expect = 7.0e-87
Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA 60
           MAPKKRTAKQEDEP  AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA
Sbjct: 1   MAPKKRTAKQEDEPAAAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA 60

Query: 61  QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL 120
           QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL
Sbjct: 61  QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL 120

Query: 121 ETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKI 180
           ETGVPGITVLVNPDKPRRGCFEIRSG GEKFISLLDMKRPFTRMKELDMGKVIS+IVEKI
Sbjct: 121 ETGVPGITVLVNPDKPRRGCFEIRSGGGEKFISLLDMKRPFTRMKELDMGKVISNIVEKI 180

[Close]

BLAST of MS001264 vs. NCBI nr
Match: XP_023536837.1 (selenoprotein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 8.1e-59
Identity = 142/184 (77.17%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPK 60
           MAPKKR+  QEDE    AAAKP P SSR TR S RLAANSKA      PV +LP RKK K
Sbjct: 1   MAPKKRSKIQEDE---TAAAKPVPASSRATRRSPRLAANSKADLTVEEPVVKLPKRKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           RA KENGK  AEEVE E E+++  AASEKLG E A NR VVIEHCKQCQSFKKRAIEVQN
Sbjct: 61  RAPKENGK--AEEVENEGEDLD--AASEKLGVE-AKNRAVVIEHCKQCQSFKKRAIEVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+E
Sbjct: 121 GLEKGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. NCBI nr
Match: XP_022950994.1 (selenoprotein H-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 5.8e-57
Identity = 139/184 (75.54%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPK 60
           MAPKKR+  QEDE    A AKP P SSRVTR S RLA NSKA   V E    LP RKK K
Sbjct: 1   MAPKKRSKIQEDE---TAVAKPVPASSRVTRRSPRLAGNSKADLTVEETVVKLPKRKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           R  KENGK  AEEVE E E+++  AASEKLG E A NR VVIEHCKQCQSFKKRA+EVQN
Sbjct: 61  RGPKENGK--AEEVENEGEDLD--AASEKLGVE-AKNRAVVIEHCKQCQSFKKRAMEVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+E
Sbjct: 121 GLEKGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. NCBI nr
Match: XP_023002520.1 (selenoprotein H-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 229.2 bits (583), Expect = 2.9e-56
Identity = 138/184 (75.00%), Postives = 149/184 (80.98%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPK 60
           MAPKKR+  QEDE    AAAKP P SSRVTR S RLAANSKA      PV +LP +KK K
Sbjct: 1   MAPKKRSKIQEDE---TAAAKPVPVSSRVTRRSPRLAANSKADLTVEEPVVKLPKKKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           RA KEN K  AEEVE E E+++  AASEKLG E A NR VVIEHCKQCQSFKKRA+EVQN
Sbjct: 61  RAPKENEK--AEEVENEGEDLD--AASEKLGVE-AKNRAVVIEHCKQCQSFKKRAMEVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITVL+NPDK RRGCFEIRS DGEKFISLLDMKRPFT+MKELDM +VISDI+E
Sbjct: 121 GLEKGVPGITVLLNPDKSRRGCFEIRSEDGEKFISLLDMKRPFTQMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. NCBI nr
Match: XP_038886764.1 (selenoprotein H [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 8.3e-56
Identity = 135/184 (73.37%), Postives = 144/184 (78.26%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVR----KKPK 60
           MAP+KR+  QEDEP   AA K AP SSRVTRSSARLAANSKA   V E        KK K
Sbjct: 1   MAPRKRSKNQEDEP---AAEKLAPASSRVTRSSARLAANSKADSAVDEAVTESAKSKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           RA KENGK +    E E E VEV AA EKL  +D  NRTVVIEHCKQCQSFKKRAI+VQN
Sbjct: 61  RAPKENGKVK----EVENEGVEVDAALEKL-DKDGKNRTVVIEHCKQCQSFKKRAIQVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITV++NPD PRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+E
Sbjct: 121 GLENGVPGITVMLNPDTPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. ExPASy Swiss-Prot
Match: Q8IZQ5 (Selenoprotein H OS=Homo sapiens OX=9606 GN=SELENOH PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06
Identity = 31/79 (39.24%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 65  PEAEEVETEKEEVEVGAASEKL--GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGV 124
           P   + + E   V V    EKL  GGE     TVVIEHC   + + + A  +   L    
Sbjct: 3   PRGRKRKAEAAVVAVAEKREKLANGGEGMEEATVVIEHCTSXRVYGRNAAALSQALRLEA 62

Query: 125 PGITVLVNPDKPRRGCFEI 142
           P + V VNP KPRRG FE+
Sbjct: 63  PELPVKVNPTKPRRGSFEV 81

[Close]

BLAST of MS001264 vs. ExPASy Swiss-Prot
Match: Q4R5Y4 (Selenoprotein H OS=Macaca fascicularis OX=9541 GN=SELENOH PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 74  KEEVEVGAASEKL-----GGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVL 133
           K E  + AA+EK       GE     TVVIEHC   + +   A  +   L    P + V 
Sbjct: 9   KAEAAMVAAAEKQERLANSGEGMEETTVVIEHCTSXRVYGXNAAALSQALRLEAPELPVK 68

Query: 134 VNPDKPRRGCFEI 142
           VNP KPRRG FE+
Sbjct: 69  VNPTKPRRGSFEV 81

[Close]

BLAST of MS001264 vs. ExPASy Swiss-Prot
Match: Q3UQA7 (Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05
Identity = 22/51 (43.14%), Postives = 29/51 (56.86%), Query Frame = 0


Query: 91  AMNRTVVIEHCKQCQSFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEI 142
           A   TVVIEHC   + + + A  +   L+   P + V VNP KPRRG FE+
Sbjct: 25  AEGATVVIEHCTSXRVYGRHAAALSQALQLEAPELPVQVNPSKPRRGSFEV 75

[Close]

BLAST of MS001264 vs. ExPASy TrEMBL
Match: A0A6J1BVW4 (uncharacterized protein LOC111005187 OS=Momordica charantia OX=3673 GN=LOC111005187 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.4e-87
Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEP--AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA 60
           MAPKKRTAKQEDEP  AAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA
Sbjct: 1   MAPKKRTAKQEDEPAAAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRA 60

Query: 61  QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL 120
           QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL
Sbjct: 61  QKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGL 120

Query: 121 ETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKI 180
           ETGVPGITVLVNPDKPRRGCFEIRSG GEKFISLLDMKRPFTRMKELDMGKVIS+IVEKI
Sbjct: 121 ETGVPGITVLVNPDKPRRGCFEIRSGGGEKFISLLDMKRPFTRMKELDMGKVISNIVEKI 180

[Close]

BLAST of MS001264 vs. ExPASy TrEMBL
Match: A0A6J1GHF7 (selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57
Identity = 139/184 (75.54%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPE----LPVRKKPK 60
           MAPKKR+  QEDE    A AKP P SSRVTR S RLA NSKA   V E    LP RKK K
Sbjct: 1   MAPKKRSKIQEDE---TAVAKPVPASSRVTRRSPRLAGNSKADLTVEETVVKLPKRKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           R  KENGK  AEEVE E E+++  AASEKLG E A NR VVIEHCKQCQSFKKRA+EVQN
Sbjct: 61  RGPKENGK--AEEVENEGEDLD--AASEKLGVE-AKNRAVVIEHCKQCQSFKKRAMEVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKELDM +VISDI+E
Sbjct: 121 GLEKGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. ExPASy TrEMBL
Match: A0A6J1KP64 (selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.4e-56
Identity = 138/184 (75.00%), Postives = 149/184 (80.98%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAG----GPVPELPVRKKPK 60
           MAPKKR+  QEDE    AAAKP P SSRVTR S RLAANSKA      PV +LP +KK K
Sbjct: 1   MAPKKRSKIQEDE---TAAAKPVPVSSRVTRRSPRLAANSKADLTVEEPVVKLPKKKKAK 60

Query: 61  RAQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQN 120
           RA KEN K  AEEVE E E+++  AASEKLG E A NR VVIEHCKQCQSFKKRA+EVQN
Sbjct: 61  RAPKENEK--AEEVENEGEDLD--AASEKLGVE-AKNRAVVIEHCKQCQSFKKRAMEVQN 120

Query: 121 GLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVE 180
           GLE GVPGITVL+NPDK RRGCFEIRS DGEKFISLLDMKRPFT+MKELDM +VISDI+E
Sbjct: 121 GLEKGVPGITVLLNPDKSRRGCFEIRSEDGEKFISLLDMKRPFTQMKELDMEEVISDIIE 176

[Close]

BLAST of MS001264 vs. ExPASy TrEMBL
Match: A0A1S3BBW1 (selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.0e-56
Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQK 60
           MAP+KR+  QE+E   +A  KPAP +SRVTRSSARLAANSKA   V ELP  KK KRA K
Sbjct: 1   MAPRKRSKNQEEE---SAMEKPAPATSRVTRSSARLAANSKADLTVTELPKSKKAKRAPK 60

Query: 61  ENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLET 120
           ENGK E    E E +EV+V    EK   +DA +RTVVIEHCKQCQSFKKRAI+VQ GLE 
Sbjct: 61  ENGKVE----EVENKEVKVDVGLEK-PDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN 120

Query: 121 GVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG 180
           GVPGITVL+NPDKPRRGCFEIRS DG+KFISLLDMKRPFTRMKELDM +VISDI+EKIKG
Sbjct: 121 GVPGITVLLNPDKPRRGCFEIRSEDGKKFISLLDMKRPFTRMKELDMDEVISDIIEKIKG 172

[Close]

BLAST of MS001264 vs. ExPASy TrEMBL
Match: A0A0A0LPC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.0e-55
Identity = 130/180 (72.22%), Postives = 146/180 (81.11%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKRAQK 60
           MAP+KRT  QE++       KPAP +SR+TRSSARLAANSKA   V ELP  KK KRA K
Sbjct: 1   MAPRKRTKNQEED---LVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPK 60

Query: 61  ENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIEVQNGLET 120
           ENGK   EEVE ++ +V+VG    KL  +DA +RTVVIEHCKQCQSFKKRAI+VQ GLE 
Sbjct: 61  ENGK--VEEVENKEVKVDVGLG--KL-DKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN 120

Query: 121 GVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISDIVEKIKG 180
           GVPGITVL+NPDKPRRGCFEIRS DGEKFISLLDMKRPFTRMKEL+M +VISDI+EKIKG
Sbjct: 121 GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG 172

[Close]

BLAST of MS001264 vs. TAIR 10
Match: AT2G24440.1 (selenium binding )

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33
Identity = 95/186 (51.08%), Postives = 115/186 (61.83%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPTSSRVTRSSARLAANSKAGGPVPELPVRKKPKR--- 60
           MA KK     E +  A A  +   +  R TRS  +   +S     + E P +KK K    
Sbjct: 1   MASKK--VDGEGKGKAIANTRMLRSMDRKTRSDTKRDGSSSKLMKI-ESPEKKKRKTTKA 60

Query: 61  ----AQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQSFKKRAIE 120
               A K+  K E   V+ EKEE E   A+EK   +D+  + +VIEHCKQC+SFK+RA E
Sbjct: 61  KNVGAAKKKVKKEEVAVKIEKEEEEDDDAAEKEEDDDSDKKKIVIEHCKQCKSFKERANE 120

Query: 121 VQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKELDMGKVISD 180
           V+ GLE  VPGI V VNPDKPRRGCFEIR   GE FISLL MKRPFT MKEL+M +VI+D
Sbjct: 121 VKEGLEEAVPGIIVTVNPDKPRRGCFEIREEGGETFISLLAMKRPFTPMKELNMEEVIAD 180

[Close]

BLAST of MS001264 vs. TAIR 10
Match: AT4G31360.1 (selenium binding )

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-32
Identity = 94/194 (48.45%), Postives = 115/194 (59.28%), Query Frame = 0


Query: 1   MAPKKRTAKQEDEPAAAAAAKPAPT--SSRVTRS------SARLAANSKAGGPVPELPVR 60
           M PKK  A  E++      AKP  T  SSRVTRS      S      +KA G   + P  
Sbjct: 1   MPPKKSKADGEEK------AKPLTTLASSRVTRSMDSRTRSQTQQNGAKAAGSATK-PAT 60

Query: 61  KKPKR-------AQKENGKPEAEEVETEKEEVEVGAASEKLGGEDAMNRTVVIEHCKQCQ 120
           KK KR        + + GK E EEVE  +E VE     E+   ED     +VIEHCKQC 
Sbjct: 61  KKAKRKNSAIETGRAKKGKKE-EEVEEPEEAVEEEVEKEEPEVEDPTRTKIVIEHCKQCN 120

Query: 121 SFKKRAIEVQNGLETGVPGITVLVNPDKPRRGCFEIRSGDGEKFISLLDMKRPFTRMKEL 180
           +FK RAI+V+  LE  VPG+TV +NP+KPRRGCFEIR   G+ FISLL+MKRPF  MK L
Sbjct: 121 AFKTRAIQVKEALEGAVPGVTVSLNPEKPRRGCFEIREEGGQTFISLLEMKRPFAPMKAL 180

The following BLAST results are available for this feature:

BLAST of MS001264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132303.1	7.0e-87	97.80	uncharacterized protein LOC111005187 [Momordica charantia]	[more]
XP_023536837.1	8.1e-59	77.17	selenoprotein H-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950994.1	5.8e-57	75.54	selenoprotein H-like isoform X1 [Cucurbita moschata]	[more]
XP_023002520.1	2.9e-56	75.00	selenoprotein H-like isoform X1 [Cucurbita maxima]	[more]
XP_038886764.1	8.3e-56	73.37	selenoprotein H [Benincasa hispida]	[more]

BLAST of MS001264 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8IZQ5	4.8e-06	39.24	Selenoprotein H OS=Homo sapiens OX=9606 GN=SELENOH PE=1 SV=2	[more]
Q4R5Y4	3.1e-05	39.73	Selenoprotein H OS=Macaca fascicularis OX=9541 GN=SELENOH PE=2 SV=2	[more]
Q3UQA7	3.1e-05	43.14	Selenoprotein H OS=Mus musculus OX=10090 GN=Selenoh PE=1 SV=2	[more]

BLAST of MS001264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVW4	3.4e-87	97.80	uncharacterized protein LOC111005187 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GHF7	2.8e-57	75.54	selenoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453972 PE...	[more]
A0A6J1KP64	1.4e-56	75.00	selenoprotein H-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496337 PE=4...	[more]
A0A1S3BBW1	4.0e-56	72.78	selenoprotein H OS=Cucumis melo OX=3656 GN=LOC103488240 PE=4 SV=1	[more]
A0A0A0LPC9	2.0e-55	72.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379100 PE=4 SV=1	[more]

BLAST of MS001264 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24440.1	6.2e-33	51.08	selenium binding	[more]
AT4G31360.1	3.1e-32	48.45	selenium binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011893	Selenoprotein, Rdx-type	TIGRFAM	TIGR02174	TIGR02174	coord: 96..147 e-value: 1.8E-9 score: 35.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 91..165 e-value: 7.2E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..83
None	No IPR available	PANTHER	PTHR33638	SELENOPROTEIN H	coord: 1..179
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 94..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001264.1	MS001264.1	mRNA