MS001233 (gene) Bitter gourd (TR) v1

Overview
NameMS001233
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain-containing protein
Locationscaffold36: 2535482 .. 2537778 (+)
RNA-Seq ExpressionMS001233
SyntenyMS001233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAGAAGAACAATATGGCAGAAGATCAAACATTATTGCCTCCAGGGTTTAGGTTTCATCCTTCTGATGAAGAGTTGATCACTTTTTATCTCTTGAATAAGATTTCAGATGCTAACTTTACTGGAAGGGCCATTACTGATGTTGATCTCAACAAATTTGAACCTTGGGAACTTCCAGGTGGGTTCGGGATTAATTAGGGTTTGTTCGTGAAACTGTTTCGTAACACCTGCGTTTTTAAGAATTTTGATCGAATGACTTGTAAATGTTGGCATTATTGTGCATAATATTCGAGTTAATATGCTTGTGATTATTTGTTTATCGTAAAAAAACAACTTTTGAACTATCATACCCTAATTTTATAGGGTATGGTTATTGCCTATATATTTTGCTTGAGCTTATTTACTCTTGGAAAGTAGATTAGGGTTTTTGTTAGGAAGCTATGTTTTAAAGTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNTTACACCAAAAAAAAAAGCATATGTATTTTCAAATATAGTATAAAATTTGAAATTTTACGAACTCAAACTCAAATATAGTAATAAAATACACTAAAGAAAAATCATACTCATACTATATTTGAAAGGAAAATAAAAAGTTGTGACATTTTTTAGAATACATATTAAACTTATACTGCGTCGTACTAGTGAGCGTAGTAATTTCTAACCCATGATTTTGGGGTGTTATTGACAACAAGTTGAGTTCGGTTCGGTGTTTTTGTTTGAAACAGGGAAGGCAAAAATGGGAGAAAAAGAGTGGTATTTCTTCAGCCTAAGAGACAGAAAATACCCTACTGGAGTGAGAACAAATAGAGCGACAAACACAGGGTATTGGAAAACCACTGGAAAAGACAAAGAAATTTTCAATAGCAATACTTCAGAGTTGGTTGGTATGAAGAAGACATTAGTGTTCTACAAAGGAAGAGCCCCAAGAGGAGAAAAAACTAATTGGGTTATGCATGAATATCGACTTCACTCTAAAACGGCCTTTCGAACTGCCAAGGTAACATTTCCTGCCATATTAAACATGCGTTTTATGTGAGATTATAGCGTTTTAAAGATCATCGTGTACAATTACTAGTTATCGAAGCTTCGATCATATTGTCATCTAGCCCCCTACATGAATATTATGAGTTATATGACTAAAGGGACGAACATAAATTCTTGAAGAATTTCGAGAGAATTGAGTTCAAATCATAATGATCACCTATCTAAGATTTAATATTTTATAAATTTTCTTGCCAAAGCACTCCTGAATATTAAAAAGATTTTTTTTTCCACAAAAATTAAAGTTGAAGATATTGATTATTAGATCTAATGCCTCCTCGTTGAATAAAAATGTTAATCACTCCCTAATGGAGTTCGTTTAATATATAGTTTTTAATATATGTAATTAATCTGTTAAATCACCATTGAACCCACAAGCTTAAAAGGATAGGTTGCGACAAATTTAATCATTTACAATAGTTTAACACTTCCCTCGTGGGCTGAAAATTTTGCTCAACGCCCAACAAATGATTATCACTATTAACTGAAAAATAAATTATATTATAGAGATTCGAACACAAAACCTCTTGTTCTGATATCATGTTAAACCACCACCGAACCTAAAAACTTAAGTTCGATTATGACAAATTTAATCACTCGTTTAATATGATCGCTTTTTATAGCTCCCTTTGGTTTGCATATTTGAACAGGACGAATGGGTGGTTTGCCGCGTATTTCAAAAGAGTGCTGGAGCCAAGAAGTATCCTCCAAACCAATCAAGAGCAGTGAATCCCTATGCCAACTTTGAAATAGCCCCCCCTATTCTTCAACCACCAATCATGCAGCTGGGAGATCCTGCTGCTCAATATGGCTACGGAAGAAACTACATCACCGGTGCAGAGCTCGCTGAGCTCAACCGAGTCCTGAGGGCCGGTGGTGGGGGCTGTGGCAGTGGAGGATCAACTACTCACGGTATCAACTTATCGATGCAGCCCCAGTTTAACTACCCACCTGCAGGAGGTTGCTTCACGATATCTGGGTTGAACTTGAACCTCGGAGGAGCTGCACCACAGCCAGTTTTGCGGTCGATGCCACCACCAGTGGTGGCAGCAACGACTATTGGCCAACAAGATATCGCTTCGTCTATGATTGCAAGTACGATGGCTCCTGAGACCGCCTATGGGACAGAGATCAACAACAATCCCAATGGATCTAGCAACAGATTTATGAACGTGGATCACTGCATGGACCTGGAGAATTACTGGCCTAACTTC

mRNA sequence

GAGAAGAAGAACAATATGGCAGAAGATCAAACATTATTGCCTCCAGGGTTTAGGTTTCATCCTTCTGATGAAGAGTTGATCACTTTTTATCTCTTGAATAAGATTTCAGATGCTAACTTTACTGGAAGGGCCATTACTGATGTTGATCTCAACAAATTTGAACCTTGGGAACTTCCAGGGAAGGCAAAAATGGGAGAAAAAGAGTGGTATTTCTTCAGCCTAAGAGACAGAAAATACCCTACTGGAGTGAGAACAAATAGAGCGACAAACACAGGGTATTGGAAAACCACTGGAAAAGACAAAGAAATTTTCAATAGCAATACTTCAGAGTTGGTTGGTATGAAGAAGACATTAGTGTTCTACAAAGGAAGAGCCCCAAGAGGAGAAAAAACTAATTGGGTTATGCATGAATATCGACTTCACTCTAAAACGGCCTTTCGAACTGCCAAGGACGAATGGGTGGTTTGCCGCGTATTTCAAAAGAGTGCTGGAGCCAAGAAGTATCCTCCAAACCAATCAAGAGCAGTGAATCCCTATGCCAACTTTGAAATAGCCCCCCCTATTCTTCAACCACCAATCATGCAGCTGGGAGATCCTGCTGCTCAATATGGCTACGGAAGAAACTACATCACCGGTGCAGAGCTCGCTGAGCTCAACCGAGTCCTGAGGGCCGGTGGTGGGGGCTGTGGCAGTGGAGGATCAACTACTCACGGTATCAACTTATCGATGCAGCCCCAGTTTAACTACCCACCTGCAGGAGGTTGCTTCACGATATCTGGGTTGAACTTGAACCTCGGAGGAGCTGCACCACAGCCAGTTTTGCGGTCGATGCCACCACCAGTGGTGGCAGCAACGACTATTGGCCAACAAGATATCGCTTCGTCTATGATTGCAAGTACGATGGCTCCTGAGACCGCCTATGGGACAGAGATCAACAACAATCCCAATGGATCTAGCAACAGATTTATGAACGTGGATCACTGCATGGACCTGGAGAATTACTGGCCTAACTTC

Coding sequence (CDS)

GAGAAGAAGAACAATATGGCAGAAGATCAAACATTATTGCCTCCAGGGTTTAGGTTTCATCCTTCTGATGAAGAGTTGATCACTTTTTATCTCTTGAATAAGATTTCAGATGCTAACTTTACTGGAAGGGCCATTACTGATGTTGATCTCAACAAATTTGAACCTTGGGAACTTCCAGGGAAGGCAAAAATGGGAGAAAAAGAGTGGTATTTCTTCAGCCTAAGAGACAGAAAATACCCTACTGGAGTGAGAACAAATAGAGCGACAAACACAGGGTATTGGAAAACCACTGGAAAAGACAAAGAAATTTTCAATAGCAATACTTCAGAGTTGGTTGGTATGAAGAAGACATTAGTGTTCTACAAAGGAAGAGCCCCAAGAGGAGAAAAAACTAATTGGGTTATGCATGAATATCGACTTCACTCTAAAACGGCCTTTCGAACTGCCAAGGACGAATGGGTGGTTTGCCGCGTATTTCAAAAGAGTGCTGGAGCCAAGAAGTATCCTCCAAACCAATCAAGAGCAGTGAATCCCTATGCCAACTTTGAAATAGCCCCCCCTATTCTTCAACCACCAATCATGCAGCTGGGAGATCCTGCTGCTCAATATGGCTACGGAAGAAACTACATCACCGGTGCAGAGCTCGCTGAGCTCAACCGAGTCCTGAGGGCCGGTGGTGGGGGCTGTGGCAGTGGAGGATCAACTACTCACGGTATCAACTTATCGATGCAGCCCCAGTTTAACTACCCACCTGCAGGAGGTTGCTTCACGATATCTGGGTTGAACTTGAACCTCGGAGGAGCTGCACCACAGCCAGTTTTGCGGTCGATGCCACCACCAGTGGTGGCAGCAACGACTATTGGCCAACAAGATATCGCTTCGTCTATGATTGCAAGTACGATGGCTCCTGAGACCGCCTATGGGACAGAGATCAACAACAATCCCAATGGATCTAGCAACAGATTTATGAACGTGGATCACTGCATGGACCTGGAGAATTACTGGCCTAACTTC

Protein sequence

EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIASTMAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF
Homology
[Close]
BLAST of MS001233 vs. NCBI nr
Match: XP_022131564.1 (protein CUP-SHAPED COTYLEDON 3 [Momordica charantia])

HSP 1 Score: 706.1 bits (1821), Expect = 1.5e-199
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 60
           EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG
Sbjct: 27  EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 86

Query: 61  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 120
           KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF
Sbjct: 87  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 146

Query: 121 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 180
           YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA
Sbjct: 147 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 206

Query: 181 NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN 240
           NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN
Sbjct: 207 NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN 266

Query: 241 LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST 300
           LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST
Sbjct: 267 LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST 326

Query: 301 MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF
Sbjct: 327 MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 364

[Close]
BLAST of MS001233 vs. NCBI nr
Match: XP_023537838.1 (protein CUP-SHAPED COTYLEDON 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 611.3 bits (1575), Expect = 5.0e-171
Identity = 300/359 (83.57%), Postives = 317/359 (88.30%), Query Frame = 0 

Query: 2   KKNNMAE------------DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVD 61
           KKNN+AE            DQT LPPGFRFHPSDEELIT+YLLNKISDANFTGRA+TDVD
Sbjct: 22  KKNNVAESDRNHQDHAQEQDQT-LPPGFRFHPSDEELITYYLLNKISDANFTGRAVTDVD 81

Query: 62  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTS 121
           LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN++TS
Sbjct: 82  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNTDTS 141

Query: 122 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYP 181
           ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAG KKYP
Sbjct: 142 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGPKKYP 201

Query: 182 PNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGC 241
           PNQ+RAVNPY N EIAPP+L PP+MQLGDPAAQYGYGRNYITGA+LAELNRVLRAGGGG 
Sbjct: 202 PNQTRAVNPYVNLEIAPPLLPPPLMQLGDPAAQYGYGRNYITGADLAELNRVLRAGGGGS 261

Query: 242 GSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQ 301
           GSGGS +HGINLSMQPQFNY PAGGCFTISGLNLNLGGA+ QPVLR MPPPV A   IGQ
Sbjct: 262 GSGGS-SHGINLSMQPQFNYQPAGGCFTISGLNLNLGGASSQPVLRPMPPPVAAPMKIGQ 321

Query: 302 QDIASSMIASTMA----------PETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           QDI SS++A+TMA          PETAYG EI+NN NG  NRFMN+DHCMDLENYW N+
Sbjct: 322 QDIGSSVMAATMANSSVIASAIGPETAYGAEISNNGNGPGNRFMNMDHCMDLENYWQNW 378

[Close]
BLAST of MS001233 vs. NCBI nr
Match: XP_023002385.1 (protein CUP-SHAPED COTYLEDON 3 [Cucurbita maxima])

HSP 1 Score: 610.5 bits (1573), Expect = 8.6e-171
Identity = 300/359 (83.57%), Postives = 316/359 (88.02%), Query Frame = 0 

Query: 2   KKNNMAE------------DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVD 61
           KKN +AE            DQT LPPGFRFHPSDEELIT+YLLNKISDANFTGRA+TDVD
Sbjct: 22  KKNTVAESDRNHQDHAQEQDQT-LPPGFRFHPSDEELITYYLLNKISDANFTGRAVTDVD 81

Query: 62  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTS 121
           LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN++TS
Sbjct: 82  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNTDTS 141

Query: 122 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYP 181
           ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAG KKYP
Sbjct: 142 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGPKKYP 201

Query: 182 PNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGC 241
           PNQ+RAVNPY N EIAPP+L PP+MQLGDPAAQYGYGRNYITGA+LAELNRVLRAGGGG 
Sbjct: 202 PNQTRAVNPYVNLEIAPPLLPPPLMQLGDPAAQYGYGRNYITGADLAELNRVLRAGGGGS 261

Query: 242 GSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQ 301
           GSGGS THGINLSMQPQFNY PAGGCFTISGLNLNLGGA+ QPVLR MPPPV A   IGQ
Sbjct: 262 GSGGS-THGINLSMQPQFNYQPAGGCFTISGLNLNLGGASSQPVLRPMPPPVAAPMKIGQ 321

Query: 302 QDIASSMIASTMA----------PETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           QDI SS++A+TMA          PETAYG EI+NN NG  NRFMN+DHCMDLENYW N+
Sbjct: 322 QDIGSSVMAATMANSSVIASAIGPETAYGAEISNNGNGPGNRFMNMDHCMDLENYWQNW 378

[Close]
BLAST of MS001233 vs. NCBI nr
Match: XP_022951842.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata])

HSP 1 Score: 610.5 bits (1573), Expect = 8.6e-171
Identity = 300/359 (83.57%), Postives = 316/359 (88.02%), Query Frame = 0 

Query: 2   KKNNMAE------------DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVD 61
           KKN +AE            DQT LPPGFRFHPSDEELIT+YLLNKISDANFTGRA+TDVD
Sbjct: 42  KKNTVAESDRNHQDHAQEQDQT-LPPGFRFHPSDEELITYYLLNKISDANFTGRAVTDVD 101

Query: 62  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTS 121
           LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN++TS
Sbjct: 102 LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNTDTS 161

Query: 122 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYP 181
           ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAG KKYP
Sbjct: 162 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGPKKYP 221

Query: 182 PNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGC 241
           PNQ+RAVNPY N EIAPP+L PP+MQLGDPAAQYGYGRNYITGA+LAELNRVLRAGGGG 
Sbjct: 222 PNQTRAVNPYVNLEIAPPLLPPPLMQLGDPAAQYGYGRNYITGADLAELNRVLRAGGGGS 281

Query: 242 GSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQ 301
           GSGGS THGINLSMQPQFNY PAGGCFTISGLNLNLGGA+ QPVLR MPPPV A   IGQ
Sbjct: 282 GSGGS-THGINLSMQPQFNYQPAGGCFTISGLNLNLGGASSQPVLRPMPPPVAAPMKIGQ 341

Query: 302 QDIASSMIASTMA----------PETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           QDI SS++A+TMA          PETAYG EI+NN NG  NRFMN+DHCMDLENYW N+
Sbjct: 342 QDIGSSVMAATMANSSVIASTIGPETAYGAEISNNGNGPGNRFMNMDHCMDLENYWQNW 398

[Close]
BLAST of MS001233 vs. NCBI nr
Match: XP_038885415.1 (NAC domain-containing protein 92 [Benincasa hispida])

HSP 1 Score: 605.5 bits (1560), Expect = 2.8e-169
Identity = 294/331 (88.82%), Postives = 303/331 (91.54%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           +DQT LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK
Sbjct: 53  KDQT-LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 112

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSEL+GMKKTLVFYKGRAPR
Sbjct: 113 EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELIGMKKTLVFYKGRAPR 172

Query: 128 GEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFEIAPP 187
           GEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKS GAKKYPPNQSRAVNPY N EIAP 
Sbjct: 173 GEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSPGAKKYPPNQSRAVNPYVNLEIAPS 232

Query: 188 ILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGINLSMQPQF 247
           +L P IMQLGDPAAQYGYGRN+IT  ELAELNRVLR  GGG GSGGS THGINLSMQPQF
Sbjct: 233 LLPPSIMQLGDPAAQYGYGRNHITSTELAELNRVLRTSGGGSGSGGS-THGINLSMQPQF 292

Query: 248 NYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIASTMAPETAY 307
           NYP  GGCFTISGLNLNLGGA  QPVLR MPPPV    TI   DIASS++AST+APETAY
Sbjct: 293 NYPTTGGCFTISGLNLNLGGAVSQPVLRPMPPPVATTMTI-SHDIASSVMASTIAPETAY 352

Query: 308 GTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           GTEINNN NG SNRFMN+DHCMDLENYWP +
Sbjct: 353 GTEINNNANGPSNRFMNMDHCMDLENYWPTW 380

[Close]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.5e-66
Identity = 116/158 (73.42%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 9   DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKE 68
           D   LPPGFRFHP+DEELIT YLL K+ D  F+ RAI +VDLNK EPW+LPG+AKMGEKE
Sbjct: 13  DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE 72

Query: 69  WYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPRG 128
           WYFFSLRDRKYPTG+RTNRAT  GYWK TGKD+EIF+S T  LVGMKKTLVFYKGRAP+G
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG 132

Query: 129 EKTNWVMHEYRLHSKTAF----RTAKDEWVVCRVFQKS 163
           EK+NWVMHEYRL  K ++    R++KDEWV+ RVFQK+
Sbjct: 133 EKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170

[Close]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.0e-65
Identity = 118/185 (63.78%), Postives = 140/185 (75.68%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           ++Q  LPPGFRFHP+DEELIT YL  K+ D  F+ +AI +VDLNK EPWELP KAK+GEK
Sbjct: 12  DEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEK 71

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFF +RDRKYPTG+RTNRAT  GYWK TGKDKEIF   +  LVGMKKTLVFY+GRAP+
Sbjct: 72  EWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPK 131

Query: 128 GEKTNWVMHEYRLHSKTAF----RTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFE 187
           G+KTNWVMHEYRL  K +     +TAK+EWV+CRVF K+AG KK P +    +  Y    
Sbjct: 132 GQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS 191

Query: 188 IAPPI 189
             PP+
Sbjct: 192 SLPPL 194

[Close]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.6e-65
Identity = 117/166 (70.48%), Postives = 135/166 (81.33%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           E+Q  LPPGFRFHP+DEELIT YL  K+ D +F+ +AI +VDLNK EPWELP  AKMGEK
Sbjct: 11  EEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEK 70

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFF +RDRKYPTG+RTNRAT  GYWK TGKDKEI+   +  LVGMKKTLVFY+GRAP+
Sbjct: 71  EWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYRGRAPK 130

Query: 128 GEKTNWVMHEYRLHSKTAF----RTAKDEWVVCRVFQKSAGAKKYP 170
           G+KTNWVMHEYRL  K +     +TAK+EWV+CRVFQKSAG KK P
Sbjct: 131 GQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIP 174

[Close]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.3e-64
Identity = 113/159 (71.07%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           ED++L+PPGFRFHP+DEELIT+YLL K+ D+NF+  AI+ VDLNK EPWELP KAKMGEK
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEK 74

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFF+LRDRKYPTG+RTNRAT  GYWK TGKD+EI +S T  L+GMKKTLVFYKGRAP+
Sbjct: 75  EWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPK 134

Query: 128 GEKTNWVMHEYRLHSKTAFR----TAKDEWVVCRVFQKS 163
           GEK+ WVMHEYRL  K ++     +AKDEWV+C+V  KS
Sbjct: 135 GEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKS 173

[Close]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 120/219 (54.79%), Postives = 147/219 (67.12%), Query Frame = 0 

Query: 13  LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKEWYFF 72
           LPPGFRFHP+DEELITFYL +KI     +G  I++VDLN+ EPWELP  AKMGE+EWYF+
Sbjct: 22  LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFY 81

Query: 73  SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPRGEKTN 132
           SLRDRKYPTG+RTNRAT  GYWK TGKDKE+F+    +LVGMKKTLVFYKGRAPRG KT 
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTK 141

Query: 133 WVMHEYRLHSKTAFR-TAKDEWVVCRVFQKSAGAK---------KYPPNQSRAVNPYANF 192
           WVMHEYRL +  + R T K+EWV+CRVF K+   K          Y  N S +   + + 
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLIHNQISYLHNHSLSTTHHHHH 201

Query: 193 EIAPPILQP--------PIMQLGDPAAQYGYGRNYITGA 214
           E  P +++P        P +   DP   Y    N++ G+
Sbjct: 202 EALPLLIEPSNKTLTNFPSLLYDDPHQNYN-NNNFLHGS 239

[Close]
BLAST of MS001233 vs. ExPASy TrEMBL
Match: A0A6J1BQL0 (protein CUP-SHAPED COTYLEDON 3 OS=Momordica charantia OX=3673 GN=LOC111004715 PE=4 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 7.3e-200
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0 

Query: 1   EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 60
           EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG
Sbjct: 27  EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 86

Query: 61  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 120
           KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF
Sbjct: 87  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 146

Query: 121 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 180
           YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA
Sbjct: 147 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 206

Query: 181 NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN 240
           NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN
Sbjct: 207 NFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGIN 266

Query: 241 LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST 300
           LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST
Sbjct: 267 LSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQDIASSMIAST 326

Query: 301 MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF
Sbjct: 327 MAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 364

[Close]
BLAST of MS001233 vs. ExPASy TrEMBL
Match: A0A6J1KNS7 (protein CUP-SHAPED COTYLEDON 3 OS=Cucurbita maxima OX=3661 GN=LOC111496242 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.2e-171
Identity = 300/359 (83.57%), Postives = 316/359 (88.02%), Query Frame = 0 

Query: 2   KKNNMAE------------DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVD 61
           KKN +AE            DQT LPPGFRFHPSDEELIT+YLLNKISDANFTGRA+TDVD
Sbjct: 22  KKNTVAESDRNHQDHAQEQDQT-LPPGFRFHPSDEELITYYLLNKISDANFTGRAVTDVD 81

Query: 62  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTS 121
           LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN++TS
Sbjct: 82  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNTDTS 141

Query: 122 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYP 181
           ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAG KKYP
Sbjct: 142 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGPKKYP 201

Query: 182 PNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGC 241
           PNQ+RAVNPY N EIAPP+L PP+MQLGDPAAQYGYGRNYITGA+LAELNRVLRAGGGG 
Sbjct: 202 PNQTRAVNPYVNLEIAPPLLPPPLMQLGDPAAQYGYGRNYITGADLAELNRVLRAGGGGS 261

Query: 242 GSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQ 301
           GSGGS THGINLSMQPQFNY PAGGCFTISGLNLNLGGA+ QPVLR MPPPV A   IGQ
Sbjct: 262 GSGGS-THGINLSMQPQFNYQPAGGCFTISGLNLNLGGASSQPVLRPMPPPVAAPMKIGQ 321

Query: 302 QDIASSMIASTMA----------PETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           QDI SS++A+TMA          PETAYG EI+NN NG  NRFMN+DHCMDLENYW N+
Sbjct: 322 QDIGSSVMAATMANSSVIASAIGPETAYGAEISNNGNGPGNRFMNMDHCMDLENYWQNW 378

[Close]
BLAST of MS001233 vs. ExPASy TrEMBL
Match: A0A6J1GIS6 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454573 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.2e-171
Identity = 300/359 (83.57%), Postives = 316/359 (88.02%), Query Frame = 0 

Query: 2   KKNNMAE------------DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVD 61
           KKN +AE            DQT LPPGFRFHPSDEELIT+YLLNKISDANFTGRA+TDVD
Sbjct: 42  KKNTVAESDRNHQDHAQEQDQT-LPPGFRFHPSDEELITYYLLNKISDANFTGRAVTDVD 101

Query: 62  LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTS 121
           LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFN++TS
Sbjct: 102 LNKFEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNTDTS 161

Query: 122 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYP 181
           ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAG KKYP
Sbjct: 162 ELVGMKKTLVFYKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGPKKYP 221

Query: 182 PNQSRAVNPYANFEIAPPILQPPIMQLGDPAAQYGYGRNYITGAELAELNRVLRAGGGGC 241
           PNQ+RAVNPY N EIAPP+L PP+MQLGDPAAQYGYGRNYITGA+LAELNRVLRAGGGG 
Sbjct: 222 PNQTRAVNPYVNLEIAPPLLPPPLMQLGDPAAQYGYGRNYITGADLAELNRVLRAGGGGS 281

Query: 242 GSGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQ 301
           GSGGS THGINLSMQPQFNY PAGGCFTISGLNLNLGGA+ QPVLR MPPPV A   IGQ
Sbjct: 282 GSGGS-THGINLSMQPQFNYQPAGGCFTISGLNLNLGGASSQPVLRPMPPPVAAPMKIGQ 341

Query: 302 QDIASSMIASTMA----------PETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           QDI SS++A+TMA          PETAYG EI+NN NG  NRFMN+DHCMDLENYW N+
Sbjct: 342 QDIGSSVMAATMANSSVIASTIGPETAYGAEISNNGNGPGNRFMNMDHCMDLENYWQNW 398

[Close]
BLAST of MS001233 vs. ExPASy TrEMBL
Match: A0A5A7VHQ8 (NAC domain-containing protein 92 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003440 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 293/342 (85.67%), Postives = 307/342 (89.77%), Query Frame = 0 

Query: 1   EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 60
           +++    +DQT LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG
Sbjct: 41  DQEQQQDKDQT-LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 100

Query: 61  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 120
           KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSEL+GMKKTLVF
Sbjct: 101 KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELIGMKKTLVF 160

Query: 121 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 180
           YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKS GAKKYPPNQSRAVNPY 
Sbjct: 161 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSPGAKKYPPNQSRAVNPYV 220

Query: 181 NFEIAPPILQPPIMQLGDPAA-QYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGI 240
           N EI   +L PPIMQLGDP+A QYGYGRNYIT  ELAELNRVLR GGGG GSGG +THGI
Sbjct: 221 NLEIPSSLLPPPIMQLGDPSATQYGYGRNYITSTELAELNRVLRTGGGGGGSGGGSTHGI 280

Query: 241 NLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSM---PPPVVAATTIGQQDIASSM 300
           NLSMQPQFNYP  GGCFTISGLNLNLGG   QPVLR +   PPPV    TIG QDIASS+
Sbjct: 281 NLSMQPQFNYPNTGGCFTISGLNLNLGGGISQPVLRQVPVPPPPVATTMTIG-QDIASSV 340

Query: 301 IASTMAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           +AST+ PETAYGTEINNN NG SNRFMN+DHCMDLENYWPN+
Sbjct: 341 MASTITPETAYGTEINNNANGPSNRFMNMDHCMDLENYWPNW 380

[Close]
BLAST of MS001233 vs. ExPASy TrEMBL
Match: A0A1S3BCI4 (NAC domain-containing protein 92 OS=Cucumis melo OX=3656 GN=LOC103488207 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 293/342 (85.67%), Postives = 307/342 (89.77%), Query Frame = 0 

Query: 1   EKKNNMAEDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 60
           +++    +DQT LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG
Sbjct: 50  DQEQQQDKDQT-LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPG 109

Query: 61  KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVF 120
           KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSEL+GMKKTLVF
Sbjct: 110 KAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELIGMKKTLVF 169

Query: 121 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYA 180
           YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKS GAKKYPPNQSRAVNPY 
Sbjct: 170 YKGRAPRGEKTNWVMHEYRLHSKTAFRTAKDEWVVCRVFQKSPGAKKYPPNQSRAVNPYV 229

Query: 181 NFEIAPPILQPPIMQLGDPAA-QYGYGRNYITGAELAELNRVLRAGGGGCGSGGSTTHGI 240
           N EI   +L PPIMQLGDP+A QYGYGRNYIT  ELAELNRVLR GGGG GSGG +THGI
Sbjct: 230 NLEIPSSLLPPPIMQLGDPSATQYGYGRNYITSTELAELNRVLRTGGGGGGSGGGSTHGI 289

Query: 241 NLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSM---PPPVVAATTIGQQDIASSM 300
           NLSMQPQFNYP  GGCFTISGLNLNLGG   QPVLR +   PPPV    TIG QDIASS+
Sbjct: 290 NLSMQPQFNYPNTGGCFTISGLNLNLGGGISQPVLRQVPVPPPPVATTMTIG-QDIASSV 349

Query: 301 IASTMAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           +AST+ PETAYGTEINNN NG SNRFMN+DHCMDLENYWPN+
Sbjct: 350 MASTITPETAYGTEINNNANGPSNRFMNMDHCMDLENYWPNW 389

[Close]
BLAST of MS001233 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-90
Identity = 187/348 (53.74%), Postives = 224/348 (64.37%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           +++  LPPGFRFHP+DEELI++YL+NKI+D NFTG+AI DVDLNK EPWELP KAKMG K
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGK 70

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNS TSELVGMKKTLVFY+GRAPR
Sbjct: 71  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPR 130

Query: 128 GEKTNWVMHEYRLHSKTAFRTAK-DEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFEIAP 187
           GEKT WVMHEYRLHSK+++RT+K DEWVVCRVF+K+   KKY    S + + + N     
Sbjct: 131 GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHTRA 190

Query: 188 PILQ---------------PPIMQLGDPAAQYGYGRNYITGA-ELAELNRVLRAGGGGCG 247
            IL                PP +Q   P       ++ +  A  LAEL+RV RA      
Sbjct: 191 SILSTNNNNPNYSSDLLQLPPHLQ---PHPSLNINQSLMANAVHLAELSRVFRA------ 250

Query: 248 SGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQ 307
              ST+  ++ S Q   NY        +SGLNLNLGGA  Q      PPPVV+      +
Sbjct: 251 ---STSTTMDSSHQQLMNYTH----MPVSGLNLNLGGALVQ------PPPVVSL-----E 310

Query: 308 DIASSMIASTMAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           D+A        A   +Y     N  NG  N  + +  CMDL+ YWP++
Sbjct: 311 DVA--------AVSASY-----NGENGFGN--VEMSQCMDLDGYWPSY 316

[Close]
BLAST of MS001233 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-90
Identity = 187/348 (53.74%), Postives = 224/348 (64.37%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           +++  LPPGFRFHP+DEELI++YL+NKI+D NFTG+AI DVDLNK EPWELP KAKMG K
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGK 70

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNS TSELVGMKKTLVFY+GRAPR
Sbjct: 71  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPR 130

Query: 128 GEKTNWVMHEYRLHSKTAFRTAK-DEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFEIAP 187
           GEKT WVMHEYRLHSK+++RT+K DEWVVCRVF+K+   KKY    S + + + N     
Sbjct: 131 GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNNHTRA 190

Query: 188 PILQ---------------PPIMQLGDPAAQYGYGRNYITGA-ELAELNRVLRAGGGGCG 247
            IL                PP +Q   P       ++ +  A  LAEL+RV RA      
Sbjct: 191 SILSTNNNNPNYSSDLLQLPPHLQ---PHPSLNINQSLMANAVHLAELSRVFRA------ 250

Query: 248 SGGSTTHGINLSMQPQFNYPPAGGCFTISGLNLNLGGAAPQPVLRSMPPPVVAATTIGQQ 307
              ST+  ++ S Q   NY        +SGLNLNLGGA  Q      PPPVV+      +
Sbjct: 251 ---STSTTMDSSHQQLMNYTH----MPVSGLNLNLGGALVQ------PPPVVSL-----E 310

Query: 308 DIASSMIASTMAPETAYGTEINNNPNGSSNRFMNVDHCMDLENYWPNF 339
           D+A        A   +Y     N  NG  N  + +  CMDL+ YWP++
Sbjct: 311 DVA--------AVSASY-----NGENGFGN--VEMSQCMDLDGYWPSY 316

[Close]
BLAST of MS001233 vs. TAIR 10
Match: AT3G18400.1 (NAC domain containing protein 58 )

HSP 1 Score: 259.2 bits (661), Expect = 4.5e-69
Identity = 122/167 (73.05%), Postives = 135/167 (80.84%), Query Frame = 0 

Query: 13  LPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKEWYFF 72
           LPPGFRFHP+DEELIT YL  K+SD  FTG+A+ DVDLNK EPW+LP KA MGEKEWYFF
Sbjct: 5   LPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYFF 64

Query: 73  SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPRGEKTN 132
           S RDRKYPTG+RTNRAT  GYWKTTGKDKEI+ S    LVGMKKTLVFYKGRAP+GEK+N
Sbjct: 65  SQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV--LVGMKKTLVFYKGRAPKGEKSN 124

Query: 133 WVMHEYRLHSKTAFR-TAKDEWVVCRVFQKSAGAKKYPPNQSRAVNP 179
           WVMHEYRL SK  F  T K+EWVVCRVF+KS  AKK    Q ++  P
Sbjct: 125 WVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQP 169

[Close]
BLAST of MS001233 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-67
Identity = 116/158 (73.42%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 9   DQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEKE 68
           D   LPPGFRFHP+DEELIT YLL K+ D  F+ RAI +VDLNK EPW+LPG+AKMGEKE
Sbjct: 13  DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE 72

Query: 69  WYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPRG 128
           WYFFSLRDRKYPTG+RTNRAT  GYWK TGKD+EIF+S T  LVGMKKTLVFYKGRAP+G
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG 132

Query: 129 EKTNWVMHEYRLHSKTAF----RTAKDEWVVCRVFQKS 163
           EK+NWVMHEYRL  K ++    R++KDEWV+ RVFQK+
Sbjct: 133 EKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170

[Close]
BLAST of MS001233 vs. TAIR 10
Match: AT5G07680.1 (NAC domain containing protein 80 )

HSP 1 Score: 249.6 bits (636), Expect = 3.6e-66
Identity = 118/185 (63.78%), Postives = 140/185 (75.68%), Query Frame = 0 

Query: 8   EDQTLLPPGFRFHPSDEELITFYLLNKISDANFTGRAITDVDLNKFEPWELPGKAKMGEK 67
           ++Q  LPPGFRFHP+DEELIT YL  K+ D  F+ +AI +VDLNK EPWELP KAK+GEK
Sbjct: 12  DEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEK 71

Query: 68  EWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSNTSELVGMKKTLVFYKGRAPR 127
           EWYFF +RDRKYPTG+RTNRAT  GYWK TGKDKEIF   +  LVGMKKTLVFY+GRAP+
Sbjct: 72  EWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPK 131

Query: 128 GEKTNWVMHEYRLHSKTAF----RTAKDEWVVCRVFQKSAGAKKYPPNQSRAVNPYANFE 187
           G+KTNWVMHEYRL  K +     +TAK+EWV+CRVF K+AG KK P +    +  Y    
Sbjct: 132 GQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS 191

Query: 188 IAPPI 189
             PP+
Sbjct: 192 SLPPL 194

The following BLAST results are available for this feature:
BLAST of MS001233 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022131564.11.5e-199100.00protein CUP-SHAPED COTYLEDON 3 [Momordica charantia][more]
XP_023537838.15.0e-17183.57protein CUP-SHAPED COTYLEDON 3 [Cucurbita pepo subsp. pepo][more]
XP_023002385.18.6e-17183.57protein CUP-SHAPED COTYLEDON 3 [Cucurbita maxima][more]
XP_022951842.18.6e-17183.57protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata][more]
XP_038885415.12.8e-16988.82NAC domain-containing protein 92 [Benincasa hispida][more]
BLAST of MS001233 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O040173.5e-6673.42Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV... [more]
Q9FLR35.0e-6563.78NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ... [more]
Q9FLJ26.6e-6570.48NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2... [more]
Q9FRV44.3e-6471.07Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV... [more]
Q9S8511.1e-6254.79Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV... [more]
BLAST of MS001233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BQL07.3e-200100.00protein CUP-SHAPED COTYLEDON 3 OS=Momordica charantia OX=3673 GN=LOC111004715 PE... [more]
A0A6J1KNS74.2e-17183.57protein CUP-SHAPED COTYLEDON 3 OS=Cucurbita maxima OX=3661 GN=LOC111496242 PE=4 ... [more]
A0A6J1GIS64.2e-17183.57protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145457... [more]
A0A5A7VHQ81.9e-16885.67NAC domain-containing protein 92 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BCI41.9e-16885.67NAC domain-containing protein 92 OS=Cucumis melo OX=3656 GN=LOC103488207 PE=4 SV... [more]
BLAST of MS001233 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24430.11.6e-9053.74NAC domain containing protein 38 [more]
AT2G24430.21.6e-9053.74NAC domain containing protein 38 [more]
AT3G18400.14.5e-6973.05NAC domain containing protein 58 [more]
AT5G53950.12.5e-6773.42NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [more]
AT5G07680.13.6e-6663.78NAC domain containing protein 80 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 14..140
e-value: 7.1E-40
score: 136.9
IPR003441NAC domainPROSITEPS51005NACcoord: 13..161
score: 61.115063
IPR036093NAC domain superfamilyGENE3D2.170.150.80NAC domaincoord: 22..165
e-value: 2.4E-58
score: 198.3
IPR036093NAC domain superfamilySUPERFAMILY101941NAC domaincoord: 6..161
NoneNo IPR availablePANTHERPTHR31744PROTEIN CUP-SHAPED COTYLEDON 2-RELATEDcoord: 8..334
NoneNo IPR availablePANTHERPTHR31744:SF84NAC TRANSCRIPTION FACTOR-LIKE PROTEINcoord: 8..334

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001233.1MS001233.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding