MS001202 (gene) Bitter gourd (TR) v1

Overview
NameMS001202
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlachrymatory-factor synthase
Locationscaffold36: 2248762 .. 2249256 (-)
RNA-Seq ExpressionMS001202
SyntenyMS001202
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

mRNA sequence

ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

Coding sequence (CDS)

ATGGCGGAAAACTCTCCGGCGAAGTGGGAAGGCCGAGTTTCCGAGGCGCTAACAGTGGCCAGCGCCGACCAGATATGGCCGATGCTCAAGGATTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCACCTGCTACGGAATCGCCGGCACCAATGGCGAGGTCGGCTGCGTCCGATTCTGCTCCGGCTTCTCAATTCCGTCACTCGACGGCGCCGATCGCGTCGTTAGCTGGTCCAAGGAACGGCTGCTAGCCGTCGATGACGACAGCCGCCGTATACGCTACGAGATCGTGGATAGCAACATCGGATTCAAGTCGTACGTGGCCACGATCGAGATTGCGCCGGGAGGAGGCGGCGGCGGCGACGGCGTGATCGAATGGAGGTTCGCGGTGGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTACCAAGAGGGATTGCGGTCCATGGTTAAGCGAATGGAGGCTGCCCTAGAACTAGAAGAA

Protein sequence

MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE
Homology
BLAST of MS001202 vs. NCBI nr
Match: XP_022131917.1 (lachrymatory-factor synthase [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAE SPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF
Sbjct: 1   MAETSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP   GG
Sbjct: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP---GG 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 166
           GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE
Sbjct: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 162

BLAST of MS001202 vs. NCBI nr
Match: XP_023537781.1 (lachrymatory-factor synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-68
Identity = 128/162 (79.01%), Postives = 143/162 (88.27%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAEN+ AKWEGRVSEAL  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENTAAKWEGRVSEALQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

BLAST of MS001202 vs. NCBI nr
Match: KAG6585381.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020297.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.5 bits (685), Expect = 3.9e-68
Identity = 128/162 (79.01%), Postives = 142/162 (87.65%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

BLAST of MS001202 vs. NCBI nr
Match: XP_023002531.1 (lachrymatory-factor synthase-like [Cucurbita maxima])

HSP 1 Score: 267.7 bits (683), Expect = 6.7e-68
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSE L  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSETLQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+ VDD+ RRIRYEIVDSNIGFKSYV+TI++  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVTVDDERRRIRYEIVDSNIGFKSYVSTIKVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM KRME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFERGLKSMAKRMEVAVQ 159

BLAST of MS001202 vs. NCBI nr
Match: XP_022951556.1 (lachrymatory-factor synthase [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 2.5e-67
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+  VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSGSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

BLAST of MS001202 vs. ExPASy Swiss-Prot
Match: P59082 (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.1e-16
Identity = 44/134 (32.84%), Postives = 67/134 (50.00%), Query Frame = 0

Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           N   KW G+V   L     +Q W +LKDF N HK  P+L+ C  + G    VGCVR+  G
Sbjct: 16  NGARKWSGKVHALLPNTKPEQAWTLLKDFINLHKVMPSLSVCELVEGEANVVGCVRYVKG 75

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
              P  +       W+KE+L+A+D+ +    Y   +   G++ Y AT++I  G    G  
Sbjct: 76  IMHPIEE-----EFWAKEKLVALDNKNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSR 135

Query: 124 VIEWRFAVEPVEGL 138
             +W F  + +EG+
Sbjct: 136 -FDWSFQCKYIEGM 143

BLAST of MS001202 vs. ExPASy TrEMBL
Match: A0A6J1BSC0 (lachrymatory-factor synthase OS=Momordica charantia OX=3673 GN=LOC111004938 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 161/165 (97.58%), Postives = 161/165 (97.58%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAE SPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF
Sbjct: 1   MAETSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP   GG
Sbjct: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAP---GG 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 166
           GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE
Sbjct: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALELEE 162

BLAST of MS001202 vs. ExPASy TrEMBL
Match: A0A6J1KLK1 (lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111496344 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-68
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSE L  A+ADQIWPMLKDFFNFHKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSETLQGATADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+D VVSWSKERL+ VDD+ RRIRYEIVDSNIGFKSYV+TI++  GG G 
Sbjct: 61  CSGFSIPSTDGSDSVVSWSKERLVTVDDERRRIRYEIVDSNIGFKSYVSTIKVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM KRME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFERGLKSMAKRMEVAVQ 159

BLAST of MS001202 vs. ExPASy TrEMBL
Match: A0A6J1GHW7 (lachrymatory-factor synthase OS=Cucurbita moschata OX=3662 GN=LOC111454336 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 127/162 (78.40%), Postives = 141/162 (87.04%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRF 60
           MAENS AKWEGRVSEAL  A+ADQIWPMLKDFFN HKWFPTLA CYG++GTNGEVGCVRF
Sbjct: 1   MAENSAAKWEGRVSEALQGATADQIWPMLKDFFNLHKWFPTLANCYGLSGTNGEVGCVRF 60

Query: 61  CSGFSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGG 120
           CSGFSIPS DG+  VVSWSKERL+AVDD+ RRIRYEIVDSNIGFKSYV+TIE+  GG G 
Sbjct: 61  CSGFSIPSTDGSGSVVSWSKERLVAVDDERRRIRYEIVDSNIGFKSYVSTIEVVEGGDG- 120

Query: 121 GDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAALE 163
             GVIEW F VE VEGLKLEDLVKK++ GL+SM +RME A++
Sbjct: 121 --GVIEWSFVVEAVEGLKLEDLVKKFETGLKSMARRMEVAVQ 159

BLAST of MS001202 vs. ExPASy TrEMBL
Match: A0A5A7VFE2 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003740 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62
Identity = 122/163 (74.85%), Postives = 139/163 (85.28%), Query Frame = 0

Query: 1   MAENSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGT-NGEVGCVR 60
           MAEN  +KWEGRV++ LT+A+ DQIWPM+KDFFNFHKWFPTLA CYG++GT N EVG VR
Sbjct: 17  MAENPASKWEGRVTQTLTLATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNNAEVGSVR 76

Query: 61  FCSGFSIP-SLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGG 120
           FCSGFSIP S DG+D VVSWSKERL+ VD++ RRI YE+VDSNIGFKSYVAT+E+  GGG
Sbjct: 77  FCSGFSIPSSSDGSDGVVSWSKERLVGVDEEHRRICYEMVDSNIGFKSYVATMEVGEGGG 136

Query: 121 GGGDGVIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
           GG   VIEWRF VE VEGLKLEDLVKKY+ GLRSM  RMEAA+
Sbjct: 137 GG--CVIEWRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 177

BLAST of MS001202 vs. ExPASy TrEMBL
Match: A0A0A0LPR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.5e-62
Identity = 119/155 (76.77%), Postives = 133/155 (85.81%), Query Frame = 0

Query: 7   AKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSI 66
           AKWEGRV+E LTVA+ DQIWPM+KDFFNFHKWFPTLA CYG++GTN EVG VRFCSGFSI
Sbjct: 19  AKWEGRVTETLTVATPDQIWPMIKDFFNFHKWFPTLANCYGLSGTNAEVGSVRFCSGFSI 78

Query: 67  PSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIE 126
           PS DG+D VVSWSKERL+ VD++ RRI YEIVDSNIGFKSYVAT+E+  G   GG  +IE
Sbjct: 79  PSSDGSDGVVSWSKERLVGVDEEHRRICYEIVDSNIGFKSYVATMEV--GSVSGGGCMIE 138

Query: 127 WRFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
           WRF VE VEGLKLEDLVKKY+ GLRSM  RMEAA+
Sbjct: 139 WRFEVEAVEGLKLEDLVKKYEVGLRSMANRMEAAV 171

BLAST of MS001202 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-48
Identity = 90/155 (58.06%), Postives = 112/155 (72.26%), Query Frame = 0

Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           +SP KW  +VS  LT A  D+IWP+  DFFN HKW PTLATC+G+ G NGE GC+RFCSG
Sbjct: 5   SSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSG 64

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
           FSI S +G D    WSKE+L+AV+   R +RYEIV+SN GF+SYV+T++I P G  G   
Sbjct: 65  FSIGS-NGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDG--C 124

Query: 124 VIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRME 159
           VIEW F V+PV GL LE+LVKKY++ L  + K ME
Sbjct: 125 VIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156

BLAST of MS001202 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.8e-48
Identity = 90/155 (58.06%), Postives = 112/155 (72.26%), Query Frame = 0

Query: 4   NSPAKWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSG 63
           +SP KW  +VS  LT A  D+IWP+  DFFN HKW PTLATC+G+ G NGE GC+RFCSG
Sbjct: 5   SSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSG 64

Query: 64  FSIPSLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDG 123
           FSI S +G D    WSKE+L+AV+   R +RYEIV+SN GF+SYV+T++I P G  G   
Sbjct: 65  FSIGS-NGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDG--C 124

Query: 124 VIEWRFAVEPVEGLKLEDLVKKYQEGLRSMVKRME 159
           VIEW F V+PV GL LE+LVKKY++ L  + K ME
Sbjct: 125 VIEWSFTVDPVRGLSLENLVKKYEKALEIITKNME 156

BLAST of MS001202 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 0

Query: 8   KWEGRVSEALTVASADQIWPMLKDFFNFHKWFPTLATCYGIAGTNGEVGCVRFCSGFSIP 67
           KWEG+    +   +A+++W +  DF N  +WFP++ TCY + GT+G  G +R+CS     
Sbjct: 9   KWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCS----- 68

Query: 68  SLDGADRVVSWSKERLLAVDDDSRRIRYEIVDSNIGFKSYVATIEIAPGGGGGGDGVIEW 127
           +    +    W+KE+L+ +D   R + YEI+++N+GF+SYVAT+++ P  G      IEW
Sbjct: 69  TTKTKEEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEW 128

Query: 128 RFAVEPVEGLKLEDLVKKYQEGLRSMVKRMEAAL 162
            F  +PV+G K EDL       L+ M  +ME  L
Sbjct: 129 SFVADPVDGWKKEDLESYVDFCLQHMANKMELNL 157

BLAST of MS001202 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 70  DGADRVVSWSKERLLAVDDDSRRIRYEIVDSNI--GFKSYVATIEIAPGGGGGGDGVIEW 129
           DG  +V   +KER+ AVD +   I + +++ ++   +KS+V TI++ P  GG G  V+ W
Sbjct: 225 DGEAKV---AKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSG-SVVHW 284

Query: 130 RFAVEPV 135
            F  E +
Sbjct: 285 HFEYEKI 287

BLAST of MS001202 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 70  DGADRVVSWSKERLLAVDDDSRRIRYEIVDSNI--GFKSYVATIEIAPGGGGGGDGVIEW 129
           DG  +V   +KER+ AVD +   I + +++ ++   +KS+V TI++ P  GG G  V+ W
Sbjct: 225 DGEAKV---AKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSG-SVVHW 284

Query: 130 RFAVEPV 135
            F  E +
Sbjct: 285 HFEYEKI 287

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131917.13.5e-8597.58lachrymatory-factor synthase [Momordica charantia][more]
XP_023537781.11.8e-6879.01lachrymatory-factor synthase [Cucurbita pepo subsp. pepo][more]
KAG6585381.13.9e-6879.01Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
XP_023002531.16.7e-6878.40lachrymatory-factor synthase-like [Cucurbita maxima][more]
XP_022951556.12.5e-6778.40lachrymatory-factor synthase [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
P590822.1e-1632.84Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1BSC01.7e-8597.58lachrymatory-factor synthase OS=Momordica charantia OX=3673 GN=LOC111004938 PE=3... [more]
A0A6J1KLK13.2e-6878.40lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111496344 PE... [more]
A0A6J1GHW71.2e-6778.40lachrymatory-factor synthase OS=Cucurbita moschata OX=3662 GN=LOC111454336 PE=3 ... [more]
A0A5A7VFE24.5e-6274.85Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A0A0LPR84.5e-6276.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G25770.14.8e-4858.06Polyketide cyclase/dehydrase and lipid transport superfamily protein [more]
AT2G25770.24.8e-4858.06Polyketide cyclase/dehydrase and lipid transport superfamily protein [more]
AT4G32870.12.5e-2837.01Polyketide cyclase/dehydrase and lipid transport superfamily protein [more]
AT1G70850.12.5e-0434.33MLP-like protein 34 [more]
AT1G70850.32.5e-0434.33MLP-like protein 34 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 20..158
e-value: 1.0E-24
score: 87.5
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..165
e-value: 5.3E-51
score: 175.2
NoneNo IPR availablePANTHERPTHR31213:SF18POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTERcoord: 6..162
NoneNo IPR availablePANTHERPTHR31213FAMILY NOT NAMEDcoord: 6..162
NoneNo IPR availableCDDcd07821PYR_PYL_RCAR_likecoord: 12..158
e-value: 6.74042E-30
score: 104.328
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 18..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001202.1MS001202.1mRNA