MS001173 (gene) Bitter gourd (TR) v1

Overview


Name	MS001173
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor bHLH93-like
Location	scaffold36: 2014405 .. 2015466 (+)
RNA-Seq Expression	MS001173
Synteny	MS001173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCGACGAACACGTCTTCATGGAGGAGTTGCTGGCTCTACGAAGAGAAGCAAATTGGGATGCCATTCCAACCGAAATCAGCGATCTCTGCTCAACTGCTTGGAGTTTCGATTACTGTTTCGATCAGAGCACTGCCAATTTCCACCAAAATTCTTCATCGGAGGCTCTGTCCGCTCAGAACCTCGACGAATTCTACCATCCTCTGGCCAGTGAGTTCTCAGTTCCACAAGTGGCCGATTCCGCCTATGCCGCCATGGAAGTAGCCGCGCCTCTGCCGTTCCAAGCAGACCGTCCGAGTGCGGAGCGAGAAGGGGAAGGAGAAGTAGAGGAAGAGGAATTAGGTTTTCTTGCGGATGAGATTCAGAATATGGAGGTTCAAGTTCAATCGGCCTGCAAAATGGAGCCGAATCTATCTCCAGAAATCCCCGTTTTCAACATCGGAACGTGCTCCCTCGAACGGAAGAACAGACCGAAGAAATTGCAGGGGCAGCCATCGAAGAACCTCATGGCGGAGAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCGATGCTCAGATCCATCGTCCCGAAGATCAGCAAGGTATAAATCGAACACCGTATCTCTGAGTCACAATTCTGGAAATGCTGGAAATTAATCTGGAAATCGTCTCGAACAGATGGACAGAACTGCGATTCTGGCGGATGCAATCGAGTACATGAAAGAACTGCTGGAGAAGATCGGGAATCTGCAGAGAGAAGTGGATCGGTCGAATCAGACGAATTCATTCAACGACACAAAACCGAGCGAATTCGTAGTGAGGAATTCACCAAAAGTAATCGAACCTTTTTGTTTTTCCCTGTTTTTCAAACACGCAGTGGATTGATTTTGAGAAATTTGGGCGTACAGTTTGAGGTGGAAAGTGGAAACGGGAACACGAGGATCGAGATTTGCTGCGCAGCGAAACCAGGATTGCTATTATCCACGGTGAATACGATTGAAGCATTGGGGCTTGAGATTCAACAGTGCGTAATTAGCTGCTTCAATGACTTCGCATTGCAGGCCACTTGTTCTGAG

mRNA sequence

ATGGAGCTCGACGAACACGTCTTCATGGAGGAGTTGCTGGCTCTACGAAGAGAAGCAAATTGGGATGCCATTCCAACCGAAATCAGCGATCTCTGCTCAACTGCTTGGAGTTTCGATTACTGTTTCGATCAGAGCACTGCCAATTTCCACCAAAATTCTTCATCGGAGGCTCTGTCCGCTCAGAACCTCGACGAATTCTACCATCCTCTGGCCAGTGAGTTCTCAGTTCCACAAGTGGCCGATTCCGCCTATGCCGCCATGGAAGTAGCCGCGCCTCTGCCGTTCCAAGCAGACCGTCCGAGTGCGGAGCGAGAAGGGGAAGGAGAAGTAGAGGAAGAGGAATTAGGTTTTCTTGCGGATGAGATTCAGAATATGGAGGTTCAAGTTCAATCGGCCTGCAAAATGGAGCCGAATCTATCTCCAGAAATCCCCGTTTTCAACATCGGAACGTGCTCCCTCGAACGGAAGAACAGACCGAAGAAATTGCAGGGGCAGCCATCGAAGAACCTCATGGCGGAGAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCGATGCTCAGATCCATCGTCCCGAAGATCAGCAAGATGGACAGAACTGCGATTCTGGCGGATGCAATCGAGTACATGAAAGAACTGCTGGAGAAGATCGGGAATCTGCAGAGAGAAGTGGATCGGTCGAATCAGACGAATTCATTCAACGACACAAAACCGAGCGAATTCGTAGTGAGGAATTCACCAAAAGTAATCGAACCTTTTTGTTTTTCCCTGTTTTTCAAACACGCAGTGTTGATTTTGAGAAATTTGGGCGTACAGTTTGAGGTGGAAAGTGGAAACGGGAACACGAGGATCGAGATTTGCTGCGCAGCGAAACCAGGATTGCTATTATCCACGGTGAATACGATTGAAGCATTGGGGCTTGAGATTCAACAGTGCGTAATTAGCTGCTTCAATGACTTCGCATTGCAGGCCACTTGTTCTGAG

Coding sequence (CDS)

ATGGAGCTCGACGAACACGTCTTCATGGAGGAGTTGCTGGCTCTACGAAGAGAAGCAAATTGGGATGCCATTCCAACCGAAATCAGCGATCTCTGCTCAACTGCTTGGAGTTTCGATTACTGTTTCGATCAGAGCACTGCCAATTTCCACCAAAATTCTTCATCGGAGGCTCTGTCCGCTCAGAACCTCGACGAATTCTACCATCCTCTGGCCAGTGAGTTCTCAGTTCCACAAGTGGCCGATTCCGCCTATGCCGCCATGGAAGTAGCCGCGCCTCTGCCGTTCCAAGCAGACCGTCCGAGTGCGGAGCGAGAAGGGGAAGGAGAAGTAGAGGAAGAGGAATTAGGTTTTCTTGCGGATGAGATTCAGAATATGGAGGTTCAAGTTCAATCGGCCTGCAAAATGGAGCCGAATCTATCTCCAGAAATCCCCGTTTTCAACATCGGAACGTGCTCCCTCGAACGGAAGAACAGACCGAAGAAATTGCAGGGGCAGCCATCGAAGAACCTCATGGCGGAGAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCGATGCTCAGATCCATCGTCCCGAAGATCAGCAAGATGGACAGAACTGCGATTCTGGCGGATGCAATCGAGTACATGAAAGAACTGCTGGAGAAGATCGGGAATCTGCAGAGAGAAGTGGATCGGTCGAATCAGACGAATTCATTCAACGACACAAAACCGAGCGAATTCGTAGTGAGGAATTCACCAAAAGTAATCGAACCTTTTTGTTTTTCCCTGTTTTTCAAACACGCAGTGTTGATTTTGAGAAATTTGGGCGTACAGTTTGAGGTGGAAAGTGGAAACGGGAACACGAGGATCGAGATTTGCTGCGCAGCGAAACCAGGATTGCTATTATCCACGGTGAATACGATTGAAGCATTGGGGCTTGAGATTCAACAGTGCGTAATTAGCTGCTTCAATGACTTCGCATTGCAGGCCACTTGTTCTGAG

Protein sequence

MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSAQNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLADEIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE

Homology

[Close]

BLAST of MS001173 vs. NCBI nr
Match: XP_022131289.1 (transcription factor bHLH93-like [Momordica charantia])

HSP 1 Score: 575.9 bits (1483), Expect = 2.3e-160
Identity = 303/328 (92.38%), Postives = 304/328 (92.68%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA
Sbjct: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD
Sbjct: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120

Query: 121 EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL 180
           EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL
Sbjct: 121 EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL 180

Query: 181 NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE 240
           NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE
Sbjct: 181 NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE 240

Query: 241 FVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLSTVN 300
           FVVRNSPK                        FEVESGNG+TRIEICCAAKPGLLLSTVN
Sbjct: 241 FVVRNSPK------------------------FEVESGNGSTRIEICCAAKPGLLLSTVN 300

Query: 301 TIEALGLEIQQCVISCFNDFALQATCSE 329
           TIEALGLEIQQCVISCFNDFALQATCSE
Sbjct: 301 TIEALGLEIQQCVISCFNDFALQATCSE 304

[Close]

BLAST of MS001173 vs. NCBI nr
Match: KAG7020231.1 (Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-138
Identity = 274/339 (80.83%), Postives = 298/339 (87.91%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH F+EEL+ALRREANWDAIPTEI+DL   AW+FDYCFDQ+ +NF+ NSSSE LS 
Sbjct: 24  MELDEHGFLEELMALRREANWDAIPTEITDL--NAWAFDYCFDQNISNFNPNSSSEPLST 83

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLA+EFSVP++ADSAYAAMEVAAPLPFQA+RP+     EGE EEEELGFLA+
Sbjct: 84  QNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNV----EGEEEEEELGFLAN 143

Query: 121 EIQNME-VQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKR 180
           EIQNME VQVQSACK EPN SPE+PVFNIGTC+LERKN PKKLQGQPSKNLMAERRRRKR
Sbjct: 144 EIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKR 203

Query: 181 LNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQT--NSFNDTK 240
           LNDRLSMLRSIVPKISKMDRTAILADAI+YMKELLEKIGNLQRE+DR+NQT  NSF+DTK
Sbjct: 204 LNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTK 263

Query: 241 PSEFVVRNSPKVIEPFCFSLFFKHAV--------LILRNLGVQFEVESGNGNTRIEICCA 300
           PSEFVVRNSPKV E F F   F+ +         LI + +GVQFEVES NGNTRIEI CA
Sbjct: 264 PSEFVVRNSPKVTELF-FGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCA 323

Query: 301 AKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           AKPGLLLSTVNTIEALGLEIQ CVISCFNDFALQATCS+
Sbjct: 324 AKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQ 355

[Close]

BLAST of MS001173 vs. NCBI nr
Match: XP_022997202.1 (transcription factor bHLH93-like [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 3.1e-133
Identity = 266/332 (80.12%), Postives = 283/332 (85.24%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH+F+EEL+ALRR++NWDAIP EISD C  AW+FDYCFDQS+ NFH NSSSE LSA
Sbjct: 14  MELDEHIFLEELMALRRDSNWDAIPNEISDFCWNAWAFDYCFDQSSMNFHPNSSSEPLSA 73

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEV-AAPLPFQADRPSAEREGEGE-VEEEELGFL 120
           QNLDEFYHPL +EFSVP +ADSAYAAMEV AAPLPFQA+RP+AEREGEGE  EEEELGFL
Sbjct: 74  QNLDEFYHPLGNEFSVPGMADSAYAAMEVEAAPLPFQAERPNAEREGEGEGEEEEELGFL 133

Query: 121 ADEIQNME-VQVQSACKMEPNLSPEIPVFNIGTC-SLERKNRPKKLQGQPSKNLMAERRR 180
           ADEIQNME VQVQSACKMEPN SP++PVFNIGTC S+ERKNR KKLQGQPSKNLMAERRR
Sbjct: 134 ADEIQNMEVVQVQSACKMEPNQSPDLPVFNIGTCSSIERKNRSKKLQGQPSKNLMAERRR 193

Query: 181 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSN-QTNSFND 240
           RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVD SN +TNS N+
Sbjct: 194 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDGSNPRTNSLNN 253

Query: 241 TKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLL 300
           TKPSE V RNSPK                        FEVES  G TRIEICCAAKPGL+
Sbjct: 254 TKPSELVARNSPK------------------------FEVESRMGKTRIEICCAAKPGLI 313

Query: 301 LSTVNTIEALGLEIQQCVISCFNDFALQATCS 328
           LSTVNTIEALGLEIQQCVIS FNDFALQATCS
Sbjct: 314 LSTVNTIEALGLEIQQCVISSFNDFALQATCS 321

[Close]

BLAST of MS001173 vs. NCBI nr
Match: XP_023546197.1 (transcription factor bHLH93-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.8 bits (1244), Expect = 1.2e-132
Identity = 267/332 (80.42%), Postives = 282/332 (84.94%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEHVF+EEL+ALRR++NWDAIP E+SDLC  AW+FDYCFDQS  NFH NSSSE LSA
Sbjct: 1   MELDEHVFLEELMALRRDSNWDAIPNELSDLCWNAWAFDYCFDQSGMNFHPNSSSEPLSA 60

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEV-AAPLPFQADRPSAEREGEGE-VEEEELGFL 120
           QNLDEFYHPL +EFSV  +ADSAYAAMEV AAPLPFQA+RP+AEREGEGE  EEEELGFL
Sbjct: 61  QNLDEFYHPLGNEFSVTGMADSAYAAMEVAAAPLPFQAERPNAEREGEGEGEEEEELGFL 120

Query: 121 ADEIQNME-VQVQSACKMEPNLSPEIPVFNIGTC-SLERKNRPKKLQGQPSKNLMAERRR 180
           ADEIQNME VQVQSACKMEPN SPE+PVFNIGTC S+ERKNR KKLQGQPSKNLMAERRR
Sbjct: 121 ADEIQNMEVVQVQSACKMEPNQSPELPVFNIGTCSSIERKNRSKKLQGQPSKNLMAERRR 180

Query: 181 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSN-QTNSFND 240
           RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVD SN +TNS N+
Sbjct: 181 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDGSNPRTNSLNN 240

Query: 241 TKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLL 300
           TKPSE V RNSPK                        FEVES  G TRIEICCAAKPGL+
Sbjct: 241 TKPSELVARNSPK------------------------FEVESRMGKTRIEICCAAKPGLI 300

Query: 301 LSTVNTIEALGLEIQQCVISCFNDFALQATCS 328
           LSTVNTIEALGLEIQQCVIS FNDFALQATCS
Sbjct: 301 LSTVNTIEALGLEIQQCVISSFNDFALQATCS 308

[Close]

BLAST of MS001173 vs. NCBI nr
Match: KAG6585313.1 (Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.4 bits (1243), Expect = 1.5e-132
Identity = 263/331 (79.46%), Postives = 283/331 (85.50%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH F+EEL+ALRREANWDAIPTEI+DL   AW+FDYCFDQ+ +N + NSSSE LS 
Sbjct: 24  MELDEHGFLEELMALRREANWDAIPTEITDL--NAWAFDYCFDQNISNVNPNSSSEPLST 83

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLA+EFSVP++ADSAYAAMEVAAPLPFQA+RP+     EGE EEEELGFLA+
Sbjct: 84  QNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNV----EGEEEEEELGFLAN 143

Query: 121 EIQNME-VQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKR 180
           EIQNME VQVQSACK EPN SPE+PVFNIGTC+LERKN PKKLQGQPSKNLMAERRRRKR
Sbjct: 144 EIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKR 203

Query: 181 LNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQT--NSFNDTK 240
           LNDRLSMLRSIVPKISKMDRTAILADAI+YMKELLEKIGNLQRE+DR+NQT  NSF+DTK
Sbjct: 204 LNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTK 263

Query: 241 PSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLS 300
           PSEFVVRNSPK                        FEVES NGNTRIEI CAAKPGLLLS
Sbjct: 264 PSEFVVRNSPK------------------------FEVESRNGNTRIEIYCAAKPGLLLS 323

Query: 301 TVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           TVNTIEALGLEIQ CVISCFNDFALQATCS+
Sbjct: 324 TVNTIEALGLEIQHCVISCFNDFALQATCSQ 324

[Close]

BLAST of MS001173 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.1e-48
Identity = 111/193 (57.51%), Postives = 133/193 (68.91%), Query Frame = 0


Query: 146 FNIGTCSLE-RKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILA 205
           F++G C  E  K + KKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL 
Sbjct: 155 FSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILG 214

Query: 206 DAIEYMKELLEKIGNLQ-REVDRSNQTNS--------FNDTKPSEFVVRNSPKVIEPFCF 265
           DAI+YMKELL+KI  LQ  E +  N  NS          D   +E +VRNSPK       
Sbjct: 215 DAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK------- 274

Query: 266 SLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVIS 325
                            FE++  + +TR++ICC+ KPGLLLSTVNT+E LGLEI+QCVIS
Sbjct: 275 -----------------FEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVIS 323

Query: 326 CFNDFALQATCSE 329
           CF+DF+LQA+CSE
Sbjct: 335 CFSDFSLQASCSE 323

[Close]

BLAST of MS001173 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.9e-42
Identity = 121/294 (41.16%), Postives = 157/294 (53.40%), Query Frame = 0


Query: 36  WSFDY-CFDQSTANFHQNSSSEALSAQNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLP 95
           W+FDY CF+             + S  NL     PL  +   PQ +   Y     + PL 
Sbjct: 34  WNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQ--PPQPSSPLYD----SPPLS 93

Query: 96  FQADRPSAEREGEGEVEEEELGFLADEIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLE 155
              D P  E           L   A +        ++     P +       +IG  + +
Sbjct: 94  SAFDYPFLEDIIHSSYSPPPLILPASQ--------ENTNNYSPLMEESKSFISIGETNKK 153

Query: 156 RKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELL 215
           R N  KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAI+YMKELL
Sbjct: 154 RSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELL 213

Query: 216 EKIGNLQREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFE 275
           +KI  LQ +       +  +    +E +VRNS                        ++FE
Sbjct: 214 DKINKLQEDEQELGSNSHLSTLITNESMVRNS------------------------LKFE 273

Query: 276 VESGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           V+    NT I+ICC  KPGL++STV+T+E LGLEI+QCVISCF+DF+LQA+C E
Sbjct: 274 VDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFE 287

[Close]

BLAST of MS001173 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-38
Identity = 138/358 (38.55%), Postives = 178/358 (49.72%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRRE--ANWDAIP------------TEISDLC---STAWSFDYCFD 60
           MELDE  F++EL++LRR+  A W A P              +SDL        S +    
Sbjct: 1   MELDEESFLDELMSLRRDGSAPWQAPPYPGGGGGGGGGGMMMSDLLFYGGDGGSAEARGG 60

Query: 61  QSTANFHQNSSSEALSAQN-LDEFYHPLASEFSVPQVADSAY-----AAMEVAAPLPFQA 120
              + F + +S  A   Q+  +EF     SE   P  +  A      AA +    L    
Sbjct: 61  MDASPFQELASMAAPPPQHPHEEFNFDCLSEVCNPYRSCGAQLVPSEAASQTQTQLTPLR 120

Query: 121 DRPSAEREGEGEVEEEELGFLADEIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKN 180
           D   AE E  G+            + +      S   M    + E      G   +    
Sbjct: 121 DAMVAEEETSGD----------KALLHGGGGSSSPTFMFGGGAGESSEMMAGIRGVGGGV 180

Query: 181 RPK-KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEK 240
            P+ KL G PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D I+Y+KEL E+
Sbjct: 181 HPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTER 240

Query: 241 IGNLQREV-------DRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNL 300
           I  L+ E+       D  N     +    +E +VRNS K                     
Sbjct: 241 IKTLEEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTK--------------------- 300

Query: 301 GVQFEVES-GNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATC 327
              F+VE+ G+GNTRIEICC A PG+LLSTV+ +E LGLEI+QCV+SCF+DF +QA+C
Sbjct: 301 ---FDVENRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASC 324

[Close]

BLAST of MS001173 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.0e-35
Identity = 96/173 (55.49%), Postives = 124/173 (71.68%), Query Frame = 0


Query: 155 RKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELL 214
           R  RP +  G PSKNLMAERRRRKRLNDRLSMLRS+VP+ISKMDRT+IL D I Y+KEL+
Sbjct: 184 RSCRPPQ-PGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELM 243

Query: 215 EKIGNLQREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFE 274
           ++I NLQ  V+ +   +S + T+    +  N+   ++P   S   +   LI RN   +FE
Sbjct: 244 DRIKNLQ--VEAATGDSSSSSTENLSMLKLNT---LKPPPSSSSGEETPLI-RN-STRFE 303

Query: 275 VE-SGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATC 327
           VE   NG+TRIE+ CAA P LL ST+  +EALG+EI+QCVISCF+DFA+QA+C
Sbjct: 304 VERRENGSTRIEMACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASC 348

[Close]

BLAST of MS001173 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-28
Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 161 KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNL 220
           K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAI+Y+KELL++I +L
Sbjct: 300 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359

Query: 221 QREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNG 280
             E++ S    S   T  S   +  +P+ +           ++   +    + EV    G
Sbjct: 360 HNELE-STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREG 419

Query: 281 N-TRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
               I + C  +PGLLL+T+  ++ LGL++QQ VISCFN FAL    +E
Sbjct: 420 RAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAE 467

[Close]

BLAST of MS001173 vs. ExPASy TrEMBL
Match: A0A6J1BPT9 (transcription factor bHLH93-like OS=Momordica charantia OX=3673 GN=LOC111004555 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 303/328 (92.38%), Postives = 304/328 (92.68%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA
Sbjct: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD
Sbjct: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120

Query: 121 EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL 180
           EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL
Sbjct: 121 EIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKRL 180

Query: 181 NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE 240
           NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE
Sbjct: 181 NDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQTNSFNDTKPSE 240

Query: 241 FVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLSTVN 300
           FVVRNSPK                        FEVESGNG+TRIEICCAAKPGLLLSTVN
Sbjct: 241 FVVRNSPK------------------------FEVESGNGSTRIEICCAAKPGLLLSTVN 300

Query: 301 TIEALGLEIQQCVISCFNDFALQATCSE 329
           TIEALGLEIQQCVISCFNDFALQATCSE
Sbjct: 301 TIEALGLEIQQCVISCFNDFALQATCSE 304

[Close]

BLAST of MS001173 vs. ExPASy TrEMBL
Match: A0A6J1K4D0 (transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111492174 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.5e-133
Identity = 266/332 (80.12%), Postives = 283/332 (85.24%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH+F+EEL+ALRR++NWDAIP EISD C  AW+FDYCFDQS+ NFH NSSSE LSA
Sbjct: 14  MELDEHIFLEELMALRRDSNWDAIPNEISDFCWNAWAFDYCFDQSSMNFHPNSSSEPLSA 73

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEV-AAPLPFQADRPSAEREGEGE-VEEEELGFL 120
           QNLDEFYHPL +EFSVP +ADSAYAAMEV AAPLPFQA+RP+AEREGEGE  EEEELGFL
Sbjct: 74  QNLDEFYHPLGNEFSVPGMADSAYAAMEVEAAPLPFQAERPNAEREGEGEGEEEEELGFL 133

Query: 121 ADEIQNME-VQVQSACKMEPNLSPEIPVFNIGTC-SLERKNRPKKLQGQPSKNLMAERRR 180
           ADEIQNME VQVQSACKMEPN SP++PVFNIGTC S+ERKNR KKLQGQPSKNLMAERRR
Sbjct: 134 ADEIQNMEVVQVQSACKMEPNQSPDLPVFNIGTCSSIERKNRSKKLQGQPSKNLMAERRR 193

Query: 181 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSN-QTNSFND 240
           RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVD SN +TNS N+
Sbjct: 194 RKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDGSNPRTNSLNN 253

Query: 241 TKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLL 300
           TKPSE V RNSPK                        FEVES  G TRIEICCAAKPGL+
Sbjct: 254 TKPSELVARNSPK------------------------FEVESRMGKTRIEICCAAKPGLI 313

Query: 301 LSTVNTIEALGLEIQQCVISCFNDFALQATCS 328
           LSTVNTIEALGLEIQQCVIS FNDFALQATCS
Sbjct: 314 LSTVNTIEALGLEIQQCVISSFNDFALQATCS 321

[Close]

BLAST of MS001173 vs. ExPASy TrEMBL
Match: A0A6J1GH95 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453960 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.8e-132
Identity = 262/331 (79.15%), Postives = 282/331 (85.20%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH F+EEL+ALRREANWDAIPTEI+DL   AW+FDYCFDQ+ +N + NSSSE LS 
Sbjct: 24  MELDEHGFLEELMALRREANWDAIPTEITDL--NAWAFDYCFDQNISNVNPNSSSEPLST 83

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLA+EFSVP++ADSAYAAMEVAAPLPFQA+RP+     EGE EEEELGFLA+
Sbjct: 84  QNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNV----EGEEEEEELGFLAN 143

Query: 121 EIQNME-VQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKR 180
           EIQNME V VQSACK EPN SPE+PVFNIGTC+LERKN PKKLQGQPSKNLMAERRRRKR
Sbjct: 144 EIQNMEAVHVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKR 203

Query: 181 LNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQT--NSFNDTK 240
           LNDRLSMLRSIVPKISKMDRTAILADAI+YMKELLEKIGNLQRE+DR+NQT  NSF+DTK
Sbjct: 204 LNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTK 263

Query: 241 PSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLS 300
           PSEFVVRNSPK                        FEVES NGNTRIEI CAAKPGLLLS
Sbjct: 264 PSEFVVRNSPK------------------------FEVESRNGNTRIEIYCAAKPGLLLS 323

Query: 301 TVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           TVNTIEALGLEIQ CVISCFNDFALQATCS+
Sbjct: 324 TVNTIEALGLEIQHCVISCFNDFALQATCSQ 324

[Close]

BLAST of MS001173 vs. ExPASy TrEMBL
Match: A0A6J1HDL3 (transcription factor bHLH93-like OS=Cucurbita moschata OX=3662 GN=LOC111462550 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131
Identity = 263/331 (79.46%), Postives = 279/331 (84.29%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEHVF+EEL+ALRR++NWDAIP E+SDLC  AW+FDYCFDQS  NFH NSSSE LSA
Sbjct: 1   MELDEHVFLEELMALRRDSNWDAIPNELSDLCWNAWAFDYCFDQSGMNFHPNSSSEPLSA 60

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAA-PLPFQADRPSAEREGEGEVEEEELGFLA 120
           QNLDEFYHPL +EFSVP +  SAYAAMEVAA PLPFQ +RP+AEREGEGE EEEELGFLA
Sbjct: 61  QNLDEFYHPLGNEFSVPGMDGSAYAAMEVAATPLPFQGERPNAEREGEGE-EEEELGFLA 120

Query: 121 DEIQNME-VQVQSACKMEPNLSPEIPVFNIGTC-SLERKNRPKKLQGQPSKNLMAERRRR 180
           DEIQNME VQVQSACKMEPN SPE+PVFNIGTC S+E+KNR KKLQGQPSKNLMAERRRR
Sbjct: 121 DEIQNMEVVQVQSACKMEPNQSPELPVFNIGTCSSIEQKNRSKKLQGQPSKNLMAERRRR 180

Query: 181 KRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSN-QTNSFNDT 240
           KRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVD SN  TNS N+T
Sbjct: 181 KRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDGSNPSTNSLNNT 240

Query: 241 KPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLL 300
           KPSE + RNSPK                        FEVES  G TRIEICCAAKPGL+L
Sbjct: 241 KPSELIARNSPK------------------------FEVESRMGKTRIEICCAAKPGLIL 300

Query: 301 STVNTIEALGLEIQQCVISCFNDFALQATCS 328
           STVNTIEALGLEIQQCVIS FNDFALQATCS
Sbjct: 301 STVNTIEALGLEIQQCVISSFNDFALQATCS 306

[Close]

BLAST of MS001173 vs. ExPASy TrEMBL
Match: A0A6J1KUM9 (transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496559 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.2e-130
Identity = 260/331 (78.55%), Postives = 280/331 (84.59%), Query Frame = 0


Query: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60
           MELDEH F+EEL+ALRREANWDAIPTE++DL   AW+FDYCFD + +NF+ NSSSE LS 
Sbjct: 1   MELDEHGFLEELMALRREANWDAIPTEMADL--NAWAFDYCFDHNISNFNPNSSSEPLST 60

Query: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120
           QNLDEFYHPLA+EFS PQ+ADSAYAAMEVAAPLPFQA+RP+     EGE EEEELGFLA+
Sbjct: 61  QNLDEFYHPLANEFSAPQMADSAYAAMEVAAPLPFQAERPNV----EGEEEEEELGFLAN 120

Query: 121 EIQNME-VQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKR 180
           EIQNME VQVQSACK EP  SPE+PVFNIGTCSLERKN PKKLQGQPSKNLMAERRRRKR
Sbjct: 121 EIQNMEAVQVQSACKAEPIQSPELPVFNIGTCSLERKNGPKKLQGQPSKNLMAERRRRKR 180

Query: 181 LNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQT--NSFNDTK 240
           LNDRLSMLRSIVPKISKMDRTAILADAI+YMKELLEKIG+LQRE+DR+NQT  NSF+DTK
Sbjct: 181 LNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGSLQREMDRTNQTTRNSFHDTK 240

Query: 241 PSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLS 300
           PSE VVRNSPK                        FEVES NGNTRIEI CAAKPGLLLS
Sbjct: 241 PSELVVRNSPK------------------------FEVESRNGNTRIEIYCAAKPGLLLS 300

Query: 301 TVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           TVNTIEALGLEIQ CVISCFNDFALQATCS+
Sbjct: 301 TVNTIEALGLEIQHCVISCFNDFALQATCSQ 301

[Close]

BLAST of MS001173 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 192.6 bits (488), Expect = 5.0e-49
Identity = 111/193 (57.51%), Postives = 133/193 (68.91%), Query Frame = 0


Query: 146 FNIGTCSLE-RKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILA 205
           F++G C  E  K + KKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL 
Sbjct: 155 FSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILG 214

Query: 206 DAIEYMKELLEKIGNLQ-REVDRSNQTNS--------FNDTKPSEFVVRNSPKVIEPFCF 265
           DAI+YMKELL+KI  LQ  E +  N  NS          D   +E +VRNSPK       
Sbjct: 215 DAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK------- 274

Query: 266 SLFFKHAVLILRNLGVQFEVESGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVIS 325
                            FE++  + +TR++ICC+ KPGLLLSTVNT+E LGLEI+QCVIS
Sbjct: 275 -----------------FEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVIS 323

Query: 326 CFNDFALQATCSE 329
           CF+DF+LQA+CSE
Sbjct: 335 CFSDFSLQASCSE 323

[Close]

BLAST of MS001173 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 7.1e-43
Identity = 121/294 (41.16%), Postives = 157/294 (53.40%), Query Frame = 0


Query: 36  WSFDY-CFDQSTANFHQNSSSEALSAQNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLP 95
           W+FDY CF+             + S  NL     PL  +   PQ +   Y     + PL 
Sbjct: 34  WNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQ--PPQPSSPLYD----SPPLS 93

Query: 96  FQADRPSAEREGEGEVEEEELGFLADEIQNMEVQVQSACKMEPNLSPEIPVFNIGTCSLE 155
              D P  E           L   A +        ++     P +       +IG  + +
Sbjct: 94  SAFDYPFLEDIIHSSYSPPPLILPASQ--------ENTNNYSPLMEESKSFISIGETNKK 153

Query: 156 RKNRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELL 215
           R N  KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAI+YMKELL
Sbjct: 154 RSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELL 213

Query: 216 EKIGNLQREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFE 275
           +KI  LQ +       +  +    +E +VRNS                        ++FE
Sbjct: 214 DKINKLQEDEQELGSNSHLSTLITNESMVRNS------------------------LKFE 273

Query: 276 VESGNGNTRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
           V+    NT I+ICC  KPGL++STV+T+E LGLEI+QCVISCF+DF+LQA+C E
Sbjct: 274 VDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFE 287

[Close]

BLAST of MS001173 vs. TAIR 10
Match: AT1G12860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-29
Identity = 80/174 (45.98%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 157 NRPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEK 216
           N   K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAI+Y+KELL++
Sbjct: 256 NNKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 315

Query: 217 IGNLQREVDRS-NQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEV 276
           I +L  E++ +   ++S +   P+   +  S +V E  C S     ++   +    + EV
Sbjct: 316 INDLHTELESTPPSSSSLHPLTPTPQTL--SYRVKEELCPS----SSLPSPKGQQPRVEV 375

Query: 277 ESGNGN-TRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
               G    I + C  +PGLLLST+  ++ LGL++QQ VISCFN FAL    +E
Sbjct: 376 RLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAE 423

[Close]

BLAST of MS001173 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-29
Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 161 KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNL 220
           K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAI+Y+KELL++I +L
Sbjct: 300 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359

Query: 221 QREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNG 280
             E++ S    S   T  S   +  +P+ +           ++   +    + EV    G
Sbjct: 360 HNELE-STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREG 419

Query: 281 N-TRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
               I + C  +PGLLL+T+  ++ LGL++QQ VISCFN FAL    +E
Sbjct: 420 RAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAE 467

[Close]

BLAST of MS001173 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-29
Identity = 76/169 (44.97%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 161 KLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNL 220
           K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAI+Y+KELL++I +L
Sbjct: 300 KKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDL 359

Query: 221 QREVDRSNQTNSFNDTKPSEFVVRNSPKVIEPFCFSLFFKHAVLILRNLGVQFEVESGNG 280
             E++ S    S   T  S   +  +P+ +           ++   +    + EV    G
Sbjct: 360 HNELE-STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREG 419

Query: 281 N-TRIEICCAAKPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSE 329
               I + C  +PGLLL+T+  ++ LGL++QQ VISCFN FAL    +E
Sbjct: 420 RAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAE 467

The following BLAST results are available for this feature:

BLAST of MS001173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131289.1	2.3e-160	92.38	transcription factor bHLH93-like [Momordica charantia]	[more]
KAG7020231.1	1.1e-138	80.83	Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997202.1	3.1e-133	80.12	transcription factor bHLH93-like [Cucurbita maxima]	[more]
XP_023546197.1	1.2e-132	80.42	transcription factor bHLH93-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585313.1	1.5e-132	79.46	Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma ...	[more]

BLAST of MS001173 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	7.1e-48	57.51	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q9LXA9	9.9e-42	41.16	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q10S44	3.0e-38	38.55	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q336V8	4.0e-35	55.49	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LSE2	2.1e-28	44.97	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]

BLAST of MS001173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BPT9	1.1e-160	92.38	transcription factor bHLH93-like OS=Momordica charantia OX=3673 GN=LOC111004555 ...	[more]
A0A6J1K4D0	1.5e-133	80.12	transcription factor bHLH93-like OS=Cucurbita maxima OX=3661 GN=LOC111492174 PE=...	[more]
A0A6J1GH95	2.8e-132	79.15	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HDL3	1.8e-131	79.46	transcription factor bHLH93-like OS=Cucurbita moschata OX=3662 GN=LOC111462550 P...	[more]
A0A6J1KUM9	1.2e-130	78.55	transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MS001173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	5.0e-49	57.51	beta HLH protein 93	[more]
AT5G10570.1	7.1e-43	41.16	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12860.1	1.5e-29	45.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	1.5e-29	44.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	1.5e-29	44.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 203..230
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 3..328
None	No IPR available	PANTHER	PTHR31945:SF72	DNA BINDING PROTEIN	coord: 3..328
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 282..323 e-value: 7.47278E-4 score: 35.6017
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 170..219 e-value: 1.3E-11 score: 54.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 170..213 e-value: 5.9E-10 score: 39.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 164..213 score: 15.154443
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 155..231 e-value: 7.6E-14 score: 53.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 168..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001173.1	MS001173.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity