Homology
BLAST of MS001168 vs. NCBI nr
Match:
XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 620/622 (99.68%), Postives = 620/622 (99.68%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MDVTLPAKHYTDGFCLFQRQSTRNRGRK RAGGRVTSEANSLRLYVGGKGKARFLVVPPS
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622
BLAST of MS001168 vs. NCBI nr
Match:
XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 573/623 (91.97%), Postives = 593/623 (95.18%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TLPAKHYTDGFCLF R+ ++NRGRK RA GRV+SE NSLRLYVG KGK RFLV+ PS
Sbjct: 1 MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVI-PS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
DCS + +VRA+ RVDTFSSNGRLQ GEKNLH HLNG S+SSSS+SNHS
Sbjct: 61 DCS------------EEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
NAITYNSIMLGLCKVRQT RAIDFLAYMVA+GCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELL 600
Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNTF 610
BLAST of MS001168 vs. NCBI nr
Match:
XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TLPAKHYTDGFCLF R +T+NR R+ A GRV+SE NSLRL+VG KGK RF V+P
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
YG +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61 ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
QS EEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600
Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
+EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610
BLAST of MS001168 vs. NCBI nr
Match:
XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])
HSP 1 Score: 1089.7 bits (2817), Expect = 0.0e+00
Identity = 547/623 (87.80%), Postives = 578/623 (92.78%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TLPAKHYTDGFCLF R + +NR R+ A GRV+SE NSLRL+ G KG RF V+P
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPS- 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSA-SNHS 120
YG + +VRA+ RVDTFSSNGRL HGEKNLH HLNGS+SSSS+ SNHS
Sbjct: 61 ----YGSEE--------QLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
QS EE ENNNHLRRLVRNGELEEGFKF+E+MVC GDIPDIIACTSLIRGLCKTGKT KAT
Sbjct: 121 QSSEEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKAT 180
Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILEDSGAVPDVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
GKLK+AMEVLDRQ+QRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAI+FLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH CK+KKM+R
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 420
Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKT+DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTE SYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 600
Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNTF 608
BLAST of MS001168 vs. NCBI nr
Match:
XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1051.6 bits (2718), Expect = 2.7e-303
Identity = 530/622 (85.21%), Postives = 560/622 (90.03%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TL AKHYTDGFCLFQR+ST+NRGRK RA R T E NS+ +VGGKGK RFLV+ PS
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVI-PS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
DCS + S VRA+ + + Q GEKNLH HLNGS+SSS +SNHSQ
Sbjct: 61 DCS------------EESFVRAVLKNPS-------QQGEKNLHTHLNGSSSSSFSSNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKF+E MV GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300
Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSK GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602
BLAST of MS001168 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 881.7 bits (2277), Expect = 4.8e-255
Identity = 447/621 (71.98%), Postives = 511/621 (82.29%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQR-QSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPP 60
MD+ + +GFCL Q+ RG K R TS + S ++ +G + + R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR-TSGSISSKIPLGSRKRNR------ 60
Query: 61 SDCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGS-NSSSSASNH 120
L +V A S+V++ NGR Q E G+ N + N S+ N
Sbjct: 61 -----------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNS 120
Query: 121 SQSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKA 180
S + E+ E+NNHLR++VR GELEEGFKF+ENMV HG++PDII CT+LIRG C+ GKTRKA
Sbjct: 121 SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 180
Query: 181 TRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCD 240
+++EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCD
Sbjct: 181 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD 240
Query: 241 SGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVT 300
SGKLKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEM+++GC PDVVT
Sbjct: 241 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 300
Query: 301 FNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMV 360
+NVL+NGICKEGRLDEAIKFLN+MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+
Sbjct: 301 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 360
Query: 361 RKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMD 420
RKG SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMD
Sbjct: 361 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 420
Query: 421 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVI 480
RAIEYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLS+KGCSPVLITYNTVI
Sbjct: 421 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 480
Query: 481 DGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVR 540
DGL+K GKT AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+R
Sbjct: 481 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 540
Query: 541 PNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALEL 600
PNA+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALEL
Sbjct: 541 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 597
Query: 601 LNELCSRGVVKKSSAEQVVVK 620
LNELC++G++KKSSAEQV K
Sbjct: 601 LNELCNKGLMKKSSAEQVAGK 597
BLAST of MS001168 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 448.7 bits (1153), Expect = 1.0e-124
Identity = 238/562 (42.35%), Postives = 340/562 (60.50%), Query Frame = 0
Query: 65 YGEKSHD-LISKQLSIVRAISRVDTFSSNGR--LQHGEKNLH--GHLNGSNSSSSASNHS 124
Y SH L+S S + S + + NGR G +NL + + + HS
Sbjct: 23 YSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHS 82
Query: 125 QS--FEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRK 184
QS F + + R R+G E +E MV G PD+I CT LI+G K
Sbjct: 83 QSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPK 142
Query: 185 ATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILR 244
A RVMEILE G PDV YN LI+G+CK I A ++LDRM SPD VTYN ++
Sbjct: 143 AVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 202
Query: 245 TLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKP 304
+LC GKL A++VL++ L C P VITYTILIEAT E GV +A+KL+DEM ++G KP
Sbjct: 203 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 262
Query: 305 DVVTFNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 364
D+ T+N +I G+CKEG +D A + + N+ GC+P+VI++NI+LR++ + G+W + EKL+
Sbjct: 263 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 322
Query: 365 AEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKE 424
+M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+ FC+E
Sbjct: 323 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 382
Query: 425 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITY 484
++D AIE+L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L GCSP +Y
Sbjct: 383 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 442
Query: 485 NTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEE 544
NT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA D+
Sbjct: 443 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 502
Query: 545 MGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKE 604
P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +LIEG+ + G E
Sbjct: 503 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 562
Query: 605 ALELLNELCSRGVVKKSSAEQV 617
A+EL N+L + + S +++
Sbjct: 563 AMELANDLVRIDAISEYSFKRL 583
BLAST of MS001168 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 5.6e-94
Identity = 186/486 (38.27%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 140 LEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 199
L + F +E++V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 200 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 259
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 260 CYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEGRLDEAI 319
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V++NVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 320 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 379
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 380 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 439
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 440 DIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 499
+ TYN + + + KV A I+ LS K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 500 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 559
EM G PD TYS+L+ GL EG A+ +EE +P +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 560 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 619
+R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of MS001168 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 343.2 bits (879), Expect = 6.2e-93
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0
Query: 123 EEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVM 182
+E NN L L NG+L + K VE M H +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 183 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 242
++ SG VPD ITYN++I CK G I +AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 243 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 302
G +QA+ QLQ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VT+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 303 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 362
N L+N C+ G L+E + ++ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 363 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 422
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 423 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 482
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 483 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 542
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 543 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 602
TY ++ GLCK ++ AI+ + M+ GCKP E Y +++G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of MS001168 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.2e-88
Identity = 167/488 (34.22%), Postives = 277/488 (56.76%), Query Frame = 0
Query: 135 VRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 194
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 195 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 254
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 255 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEG 314
+ + R+C P+ +TY LI CKE+ V +A +L + +KG PDV TFN LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 315 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 374
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 375 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 434
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 435 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDA 494
G PD TYN+LLT C+ G + A +I+ +++ GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 495 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 554
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 555 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 614
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 615 KKSSAEQV 617
+ V
Sbjct: 715 SEEEVSMV 722
BLAST of MS001168 vs. ExPASy TrEMBL
Match:
A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 620/622 (99.68%), Postives = 620/622 (99.68%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MDVTLPAKHYTDGFCLFQRQSTRNRGRK RAGGRVTSEANSLRLYVGGKGKARFLVVPPS
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622
BLAST of MS001168 vs. ExPASy TrEMBL
Match:
A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)
HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TLPAKHYTDGFCLF R +T+NR R+ A GRV+SE NSLRL+VG KGK RF V+P
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
YG +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61 ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
QS EEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600
Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
+EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610
BLAST of MS001168 vs. ExPASy TrEMBL
Match:
A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)
HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TLPAKHYTDGFCLF R +T+NR R+ A GRV+SE NSLRL+VG KGK RF V+P
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
YG +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61 ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120
Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
QS EEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180
Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300
Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360
Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480
Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600
Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
+EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610
BLAST of MS001168 vs. ExPASy TrEMBL
Match:
A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)
HSP 1 Score: 1049.3 bits (2712), Expect = 6.4e-303
Identity = 529/622 (85.05%), Postives = 559/622 (89.87%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TL AKHYTDGFCLFQR+ST+NRGR RA R T E NS+ +VGGKGK RFLVV PS
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVV-PS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
DCS + S VRA+ + + Q GEKN+H HLNGS+SSS +SNHSQ
Sbjct: 61 DCS------------EESFVRAVLKNPS-------QQGEKNVHTHLNGSSSSSFSSNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKF+E MV GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300
Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSK GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602
BLAST of MS001168 vs. ExPASy TrEMBL
Match:
A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)
HSP 1 Score: 1042.7 bits (2695), Expect = 6.0e-301
Identity = 526/622 (84.57%), Postives = 555/622 (89.23%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
MD+TL AKHYTDGFCLFQR+ST+N R RA R T E NS+ VGGKGK RFLV+ PS
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVI-PS 60
Query: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
DCS + S VRA+ + LQ GEKNLH HLNGS+SSS +SNHSQ
Sbjct: 61 DCS------------EESFVRAVLK-------NPLQQGEKNLHTHLNGSSSSSFSSNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKF+E MV GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300
Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL K CSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSK GKTEDA+KLLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602
BLAST of MS001168 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 881.7 bits (2277), Expect = 3.4e-256
Identity = 447/621 (71.98%), Postives = 511/621 (82.29%), Query Frame = 0
Query: 1 MDVTLPAKHYTDGFCLFQR-QSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPP 60
MD+ + +GFCL Q+ RG K R TS + S ++ +G + + R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR-TSGSISSKIPLGSRKRNR------ 60
Query: 61 SDCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGS-NSSSSASNH 120
L +V A S+V++ NGR Q E G+ N + N S+ N
Sbjct: 61 -----------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNS 120
Query: 121 SQSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKA 180
S + E+ E+NNHLR++VR GELEEGFKF+ENMV HG++PDII CT+LIRG C+ GKTRKA
Sbjct: 121 SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 180
Query: 181 TRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCD 240
+++EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCD
Sbjct: 181 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD 240
Query: 241 SGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVT 300
SGKLKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEM+++GC PDVVT
Sbjct: 241 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 300
Query: 301 FNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMV 360
+NVL+NGICKEGRLDEAIKFLN+MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+
Sbjct: 301 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 360
Query: 361 RKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMD 420
RKG SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMD
Sbjct: 361 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 420
Query: 421 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVI 480
RAIEYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLS+KGCSPVLITYNTVI
Sbjct: 421 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 480
Query: 481 DGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVR 540
DGL+K GKT AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+R
Sbjct: 481 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 540
Query: 541 PNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALEL 600
PNA+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALEL
Sbjct: 541 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 597
Query: 601 LNELCSRGVVKKSSAEQVVVK 620
LNELC++G++KKSSAEQV K
Sbjct: 601 LNELCNKGLMKKSSAEQVAGK 597
BLAST of MS001168 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 448.7 bits (1153), Expect = 7.4e-126
Identity = 238/562 (42.35%), Postives = 340/562 (60.50%), Query Frame = 0
Query: 65 YGEKSHD-LISKQLSIVRAISRVDTFSSNGR--LQHGEKNLH--GHLNGSNSSSSASNHS 124
Y SH L+S S + S + + NGR G +NL + + + HS
Sbjct: 23 YSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHS 82
Query: 125 QS--FEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRK 184
QS F + + R R+G E +E MV G PD+I CT LI+G K
Sbjct: 83 QSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPK 142
Query: 185 ATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILR 244
A RVMEILE G PDV YN LI+G+CK I A ++LDRM SPD VTYN ++
Sbjct: 143 AVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 202
Query: 245 TLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKP 304
+LC GKL A++VL++ L C P VITYTILIEAT E GV +A+KL+DEM ++G KP
Sbjct: 203 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 262
Query: 305 DVVTFNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 364
D+ T+N +I G+CKEG +D A + + N+ GC+P+VI++NI+LR++ + G+W + EKL+
Sbjct: 263 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 322
Query: 365 AEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKE 424
+M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+ FC+E
Sbjct: 323 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 382
Query: 425 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITY 484
++D AIE+L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L GCSP +Y
Sbjct: 383 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 442
Query: 485 NTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEE 544
NT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA D+
Sbjct: 443 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 502
Query: 545 MGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKE 604
P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +LIEG+ + G E
Sbjct: 503 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 562
Query: 605 ALELLNELCSRGVVKKSSAEQV 617
A+EL N+L + + S +++
Sbjct: 563 AMELANDLVRIDAISEYSFKRL 583
BLAST of MS001168 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 346.7 bits (888), Expect = 4.0e-95
Identity = 186/486 (38.27%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 140 LEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 199
L + F +E++V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 200 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 259
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 260 CYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEGRLDEAI 319
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V++NVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 320 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 379
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 380 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 439
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 440 DIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 499
+ TYN + + + KV A I+ LS K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 500 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 559
EM G PD TYS+L+ GL EG A+ +EE +P +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 560 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 619
+R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of MS001168 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 343.2 bits (879), Expect = 4.4e-94
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0
Query: 123 EEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVM 182
+E NN L L NG+L + K VE M H +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 183 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 242
++ SG VPD ITYN++I CK G I +AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 243 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 302
G +QA+ QLQ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VT+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 303 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 362
N L+N C+ G L+E + ++ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 363 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 422
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 423 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 482
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 483 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 542
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 543 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 602
TY ++ GLCK ++ AI+ + M+ GCKP E Y +++G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of MS001168 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 328.9 bits (842), Expect = 8.5e-90
Identity = 167/488 (34.22%), Postives = 277/488 (56.76%), Query Frame = 0
Query: 135 VRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 194
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 195 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 254
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 255 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEG 314
+ + R+C P+ +TY LI CKE+ V +A +L + +KG PDV TFN LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 315 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 374
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 375 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 434
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 435 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDA 494
G PD TYN+LLT C+ G + A +I+ +++ GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 495 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 554
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 555 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 614
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 615 KKSSAEQV 617
+ V
Sbjct: 715 SEEEVSMV 722
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022132179.1 | 0.0e+00 | 99.68 | pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia] | [more] |
XP_038886112.1 | 0.0e+00 | 91.97 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] | [more] |
XP_008444958.1 | 0.0e+00 | 89.25 | PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... | [more] |
XP_011649703.1 | 0.0e+00 | 87.80 | pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... | [more] |
XP_023546483.1 | 2.7e-303 | 85.21 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
Q3EDF8 | 4.8e-255 | 71.98 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 1.0e-124 | 42.35 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
A3KPF8 | 5.6e-94 | 38.27 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9FRS4 | 6.2e-93 | 37.89 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 1.2e-88 | 34.22 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BSC2 | 0.0e+00 | 99.68 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A5A7VFH1 | 0.0e+00 | 89.25 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BB35 | 0.0e+00 | 89.25 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1HFE3 | 6.4e-303 | 85.05 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1K404 | 6.0e-301 | 84.57 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09900.1 | 3.4e-256 | 71.98 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 7.4e-126 | 42.35 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G79080.1 | 4.0e-95 | 38.27 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08610.1 | 4.4e-94 | 37.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 8.5e-90 | 34.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |