MS001168 (gene) Bitter gourd (TR) v1

Overview
NameMS001168
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold36: 1974965 .. 1976830 (-)
RNA-Seq ExpressionMS001168
SyntenyMS001168
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAACGTTACCAGCAAAGCATTATACAGATGGGTTCTGTTTGTTTCAGCGTCAGAGCACAAGAAATCGCGGCCGTAAAGCGAGGGCCGGGGGGAGGGTTACTTCGGAGGCCAATTCTTTAAGGCTTTATGTCGGAGGAAAGGGGAAAGCTCGGTTTCTCGTTGTTCCTCCTTCTGATTGTTCTGTCTATGGAGAAAAATCCCATGATTTGATTAGTAAACAGCTGAGCATTGTTCGTGCGATTTCGAGGGTCGATACGTTTAGTTCCAATGGTAGATTGCAGCACGGGGAGAAGAATCTCCATGGCCATTTGAATGGCTCCAATTCGTCGTCGTCTGCTTCGAATCACTCGCAAAGTTTCGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTGTCGAGAATATGGTTTGCCACGGAGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGCGGTTTGTGTAAAACGGGGAAGACTAGGAAGGCAACTCGGGTTATGGAAATTTTGGAAGATTCGGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTGATTAGTGGTTACTGTAAATCTGGTGAAATTGGGAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGAACTCTGTGTGACAGTGGAAAGTTGAAGCAGGCCATGGAAGTTCTTGATAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACCTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAAGAACAAAGGATGTAAGCCTGATGTTGTCACTTTCAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTCTTGAACAACATGCCTTCCTATGGCTGCCAACCGAATGTGATCACTCATAATATAATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCTATCGACGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCAAATTCCTTGAGCTACAACCCATTGCTTCATGGATTCTGCAAAGAGAAAAAGATGGACCGTGCAATCGAGTATTTGGATATCATGGTTTCAAGAGGCTGTTACCCTGATATAGTGACCTATAACACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTCAGTGCCAAAGGTTGCTCTCCTGTATTGATCACATACAACACAGTCATTGATGGGCTTTCAAAGGTGGGAAAAACAGAAGATGCCATAAAACTCCTAGATGAGATGAAGGGAAAAGGCCTCAAACCGGATATAATTACGTACTCGTCACTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTCGACGAAGCGATTGCATTTTTTCACGACTTGGAAGAAATGGGTGTAAGGCCTAATGCCATCACGTACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCAGAGGGTGTAAACCGACCGAGGCTTCGTACATGATTCTGATTGAAGGATTGGCGTATGAAGGTTTGGCCAAGGAGGCATTGGAGTTGCTCAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCGGAGCAGGTGGTGGTCAAAAACTCTTTT

mRNA sequence

ATGGATGTAACGTTACCAGCAAAGCATTATACAGATGGGTTCTGTTTGTTTCAGCGTCAGAGCACAAGAAATCGCGGCCGTAAAGCGAGGGCCGGGGGGAGGGTTACTTCGGAGGCCAATTCTTTAAGGCTTTATGTCGGAGGAAAGGGGAAAGCTCGGTTTCTCGTTGTTCCTCCTTCTGATTGTTCTGTCTATGGAGAAAAATCCCATGATTTGATTAGTAAACAGCTGAGCATTGTTCGTGCGATTTCGAGGGTCGATACGTTTAGTTCCAATGGTAGATTGCAGCACGGGGAGAAGAATCTCCATGGCCATTTGAATGGCTCCAATTCGTCGTCGTCTGCTTCGAATCACTCGCAAAGTTTCGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTGTCGAGAATATGGTTTGCCACGGAGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGCGGTTTGTGTAAAACGGGGAAGACTAGGAAGGCAACTCGGGTTATGGAAATTTTGGAAGATTCGGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTGATTAGTGGTTACTGTAAATCTGGTGAAATTGGGAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGAACTCTGTGTGACAGTGGAAAGTTGAAGCAGGCCATGGAAGTTCTTGATAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACCTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAAGAACAAAGGATGTAAGCCTGATGTTGTCACTTTCAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTCTTGAACAACATGCCTTCCTATGGCTGCCAACCGAATGTGATCACTCATAATATAATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCTATCGACGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCAAATTCCTTGAGCTACAACCCATTGCTTCATGGATTCTGCAAAGAGAAAAAGATGGACCGTGCAATCGAGTATTTGGATATCATGGTTTCAAGAGGCTGTTACCCTGATATAGTGACCTATAACACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTCAGTGCCAAAGGTTGCTCTCCTGTATTGATCACATACAACACAGTCATTGATGGGCTTTCAAAGGTGGGAAAAACAGAAGATGCCATAAAACTCCTAGATGAGATGAAGGGAAAAGGCCTCAAACCGGATATAATTACGTACTCGTCACTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTCGACGAAGCGATTGCATTTTTTCACGACTTGGAAGAAATGGGTGTAAGGCCTAATGCCATCACGTACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCAGAGGGTGTAAACCGACCGAGGCTTCGTACATGATTCTGATTGAAGGATTGGCGTATGAAGGTTTGGCCAAGGAGGCATTGGAGTTGCTCAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCGGAGCAGGTGGTGGTCAAAAACTCTTTT

Coding sequence (CDS)

ATGGATGTAACGTTACCAGCAAAGCATTATACAGATGGGTTCTGTTTGTTTCAGCGTCAGAGCACAAGAAATCGCGGCCGTAAAGCGAGGGCCGGGGGGAGGGTTACTTCGGAGGCCAATTCTTTAAGGCTTTATGTCGGAGGAAAGGGGAAAGCTCGGTTTCTCGTTGTTCCTCCTTCTGATTGTTCTGTCTATGGAGAAAAATCCCATGATTTGATTAGTAAACAGCTGAGCATTGTTCGTGCGATTTCGAGGGTCGATACGTTTAGTTCCAATGGTAGATTGCAGCACGGGGAGAAGAATCTCCATGGCCATTTGAATGGCTCCAATTCGTCGTCGTCTGCTTCGAATCACTCGCAAAGTTTCGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTGTCGAGAATATGGTTTGCCACGGAGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGCGGTTTGTGTAAAACGGGGAAGACTAGGAAGGCAACTCGGGTTATGGAAATTTTGGAAGATTCGGGGGCTGTTCCTGATGTGATAACTTACAATGTTCTGATTAGTGGTTACTGTAAATCTGGTGAAATTGGGAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATACAATACAATCTTGCGAACTCTGTGTGACAGTGGAAAGTTGAAGCAGGCCATGGAAGTTCTTGATAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACCTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAAGAACAAAGGATGTAAGCCTGATGTTGTCACTTTCAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTCTTGAACAACATGCCTTCCTATGGCTGCCAACCGAATGTGATCACTCATAATATAATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCTAGTGTTGTCACTTTCAATATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCTATCGACGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCAAATTCCTTGAGCTACAACCCATTGCTTCATGGATTCTGCAAAGAGAAAAAGATGGACCGTGCAATCGAGTATTTGGATATCATGGTTTCAAGAGGCTGTTACCCTGATATAGTGACCTATAACACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTCAGTGCCAAAGGTTGCTCTCCTGTATTGATCACATACAACACAGTCATTGATGGGCTTTCAAAGGTGGGAAAAACAGAAGATGCCATAAAACTCCTAGATGAGATGAAGGGAAAAGGCCTCAAACCGGATATAATTACGTACTCGTCACTCGTCGGAGGACTGAGCAGGGAAGGAAAAGTCGACGAAGCGATTGCATTTTTTCACGACTTGGAAGAAATGGGTGTAAGGCCTAATGCCATCACGTACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCAGAGGGTGTAAACCGACCGAGGCTTCGTACATGATTCTGATTGAAGGATTGGCGTATGAAGGTTTGGCCAAGGAGGCATTGGAGTTGCTCAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCGGAGCAGGTGGTGGTCAAAAACTCTTTT

Protein sequence

MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPSDCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKNSF
Homology
BLAST of MS001168 vs. NCBI nr
Match: XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 620/622 (99.68%), Postives = 620/622 (99.68%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MDVTLPAKHYTDGFCLFQRQSTRNRGRK RAGGRVTSEANSLRLYVGGKGKARFLVVPPS
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
           DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
           KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300

Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
           IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
           AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
           ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622

BLAST of MS001168 vs. NCBI nr
Match: XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])

HSP 1 Score: 1134.8 bits (2934), Expect = 0.0e+00
Identity = 573/623 (91.97%), Postives = 593/623 (95.18%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TLPAKHYTDGFCLF R+ ++NRGRK RA GRV+SE NSLRLYVG KGK RFLV+ PS
Sbjct: 1   MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVI-PS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
           DCS            +  +VRA+ RVDTFSSNGRLQ GEKNLH HLNG S+SSSS+SNHS
Sbjct: 61  DCS------------EEPLVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QSFEEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
           NAITYNSIMLGLCKVRQT RAIDFLAYMVA+GCKPTEASYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELL 600

Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
           NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNTF 610

BLAST of MS001168 vs. NCBI nr
Match: XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TLPAKHYTDGFCLF R +T+NR R+  A GRV+SE NSLRL+VG KGK RF V+P  
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
               YG            +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61  ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QS EEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
           NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600

Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
           +EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610

BLAST of MS001168 vs. NCBI nr
Match: XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])

HSP 1 Score: 1089.7 bits (2817), Expect = 0.0e+00
Identity = 547/623 (87.80%), Postives = 578/623 (92.78%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TLPAKHYTDGFCLF R + +NR R+  A GRV+SE NSLRL+ G KG  RF V+P  
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPS- 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSA-SNHS 120
               YG +          +VRA+ RVDTFSSNGRL HGEKNLH HLNGS+SSSS+ SNHS
Sbjct: 61  ----YGSEE--------QLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QS EE ENNNHLRRLVRNGELEEGFKF+E+MVC GDIPDIIACTSLIRGLCKTGKT KAT
Sbjct: 121 QSSEEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKAT 180

Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILEDSGAVPDVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
           GKLK+AMEVLDRQ+QRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAI+FLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH  CK+KKM+R
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 420

Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKT+DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+P
Sbjct: 481 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
           NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTE SYMILIEGLAYEGLAKEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 600

Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
           NELCSRGVVKKSSAEQVVVKN+F
Sbjct: 601 NELCSRGVVKKSSAEQVVVKNTF 608

BLAST of MS001168 vs. NCBI nr
Match: XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1051.6 bits (2718), Expect = 2.7e-303
Identity = 530/622 (85.21%), Postives = 560/622 (90.03%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TL AKHYTDGFCLFQR+ST+NRGRK RA  R T E NS+  +VGGKGK RFLV+ PS
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVI-PS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
           DCS            + S VRA+ +  +       Q GEKNLH HLNGS+SSS +SNHSQ
Sbjct: 61  DCS------------EESFVRAVLKNPS-------QQGEKNLHTHLNGSSSSSFSSNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKF+E MV  GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
           KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300

Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
           IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL  KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSK GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
            ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
           ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602

BLAST of MS001168 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 4.8e-255
Identity = 447/621 (71.98%), Postives = 511/621 (82.29%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQR-QSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPP 60
           MD+ +      +GFCL Q+      RG K     R TS + S ++ +G + + R      
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR-TSGSISSKIPLGSRKRNR------ 60

Query: 61  SDCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGS-NSSSSASNH 120
                            L +V A S+V++   NGR Q  E    G+ N + N   S+ N 
Sbjct: 61  -----------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNS 120

Query: 121 SQSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKA 180
           S + E+ E+NNHLR++VR GELEEGFKF+ENMV HG++PDII CT+LIRG C+ GKTRKA
Sbjct: 121 SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 180

Query: 181 TRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCD 240
            +++EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCD
Sbjct: 181 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD 240

Query: 241 SGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVT 300
           SGKLKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEM+++GC PDVVT
Sbjct: 241 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 300

Query: 301 FNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMV 360
           +NVL+NGICKEGRLDEAIKFLN+MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+
Sbjct: 301 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 360

Query: 361 RKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMD 420
           RKG SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMD
Sbjct: 361 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 420

Query: 421 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVI 480
           RAIEYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLS+KGCSPVLITYNTVI
Sbjct: 421 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 480

Query: 481 DGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVR 540
           DGL+K GKT  AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+R
Sbjct: 481 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 540

Query: 541 PNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALEL 600
           PNA+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALEL
Sbjct: 541 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 597

Query: 601 LNELCSRGVVKKSSAEQVVVK 620
           LNELC++G++KKSSAEQV  K
Sbjct: 601 LNELCNKGLMKKSSAEQVAGK 597

BLAST of MS001168 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.0e-124
Identity = 238/562 (42.35%), Postives = 340/562 (60.50%), Query Frame = 0

Query: 65  YGEKSHD-LISKQLSIVRAISRVDTFSSNGR--LQHGEKNLH--GHLNGSNSSSSASNHS 124
           Y   SH  L+S   S +   S  +  + NGR     G +NL      + +  +     HS
Sbjct: 23  YSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHS 82

Query: 125 QS--FEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRK 184
           QS  F + +      R  R+G   E    +E MV  G  PD+I CT LI+G        K
Sbjct: 83  QSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPK 142

Query: 185 ATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILR 244
           A RVMEILE  G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTYN ++ 
Sbjct: 143 AVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 202

Query: 245 TLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKP 304
           +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM ++G KP
Sbjct: 203 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 262

Query: 305 DVVTFNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 364
           D+ T+N +I G+CKEG +D A + + N+   GC+P+VI++NI+LR++ + G+W + EKL+
Sbjct: 263 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 322

Query: 365 AEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKE 424
            +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+  FC+E
Sbjct: 323 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 382

Query: 425 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITY 484
            ++D AIE+L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L   GCSP   +Y
Sbjct: 383 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 442

Query: 485 NTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEE 544
           NT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA     D+  
Sbjct: 443 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 502

Query: 545 MGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKE 604
               P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +LIEG+ + G   E
Sbjct: 503 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 562

Query: 605 ALELLNELCSRGVVKKSSAEQV 617
           A+EL N+L     + + S +++
Sbjct: 563 AMELANDLVRIDAISEYSFKRL 583

BLAST of MS001168 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.6e-94
Identity = 186/486 (38.27%), Postives = 291/486 (59.88%), Query Frame = 0

Query: 140 LEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 199
           L + F  +E++V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 200 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 259
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 260 CYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEGRLDEAI 319
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V++NVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 320 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 379
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 380 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 439
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 440 DIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 499
           +  TYN + +    + KV  A  I+  LS K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 500 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 559
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 560 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 619
           +R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of MS001168 vs. ExPASy Swiss-Prot
Match: Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.2e-93
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0

Query: 123 EEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVM 182
           +E  NN  L  L  NG+L +  K VE M  H  +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 183 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 242
            ++  SG VPD ITYN++I   CK G I +AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 243 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 302
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VT+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 303 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 362
           N L+N  C+ G L+E    + ++ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 363 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 422
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 423 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 482
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L    C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 483 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 542
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 543 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 602
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +++G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of MS001168 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-88
Identity = 167/488 (34.22%), Postives = 277/488 (56.76%), Query Frame = 0

Query: 135 VRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 194
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 195 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 254
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 255 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEG 314
           + + R+C P+ +TY  LI   CKE+ V +A +L   + +KG  PDV TFN LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 315 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 374
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 375 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 434
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 435 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDA 494
           G  PD  TYN+LLT  C+ G +  A +I+  +++ GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 495 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 554
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 555 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 614
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 615 KKSSAEQV 617
            +     V
Sbjct: 715 SEEEVSMV 722

BLAST of MS001168 vs. ExPASy TrEMBL
Match: A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)

HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 620/622 (99.68%), Postives = 620/622 (99.68%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MDVTLPAKHYTDGFCLFQRQSTRNRGRK RAGGRVTSEANSLRLYVGGKGKARFLVVPPS
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
           DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
           KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300

Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
           IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
           AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
           ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622

BLAST of MS001168 vs. ExPASy TrEMBL
Match: A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TLPAKHYTDGFCLF R +T+NR R+  A GRV+SE NSLRL+VG KGK RF V+P  
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
               YG            +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61  ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QS EEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
           NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600

Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
           +EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610

BLAST of MS001168 vs. ExPASy TrEMBL
Match: A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 556/623 (89.25%), Postives = 582/623 (93.42%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TLPAKHYTDGFCLF R +T+NR R+  A GRV+SE NSLRL+VG KGK RF V+P  
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPS- 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNG-SNSSSSASNHS 120
               YG            +VRA+ RVDTFSSNGRL HGEKNLH HLNG S+SSSS+SN+S
Sbjct: 61  ----YGSDE--------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYS 120

Query: 121 QSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKAT 180
           QS EEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKAT
Sbjct: 121 QSSEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKAT 180

Query: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240
           RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS
Sbjct: 181 RVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDS 240

Query: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 300
           GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+
Sbjct: 241 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 300

Query: 301 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 360
           NVLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+R
Sbjct: 301 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIR 360

Query: 361 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420
           KGCSPSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR
Sbjct: 361 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 420

Query: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 480
           AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL +KGCSPVLITYNTVID
Sbjct: 421 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVID 480

Query: 481 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 540
           GLSKVGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRP
Sbjct: 481 GLSKVGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRP 540

Query: 541 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 600
           NAITYNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL
Sbjct: 541 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELL 600

Query: 601 NELCSRGVVKKSSAEQVVVKNSF 623
           +EL SRGVV+KSSAEQVVVKN+F
Sbjct: 601 DELYSRGVVRKSSAEQVVVKNTF 610

BLAST of MS001168 vs. ExPASy TrEMBL
Match: A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 6.4e-303
Identity = 529/622 (85.05%), Postives = 559/622 (89.87%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TL AKHYTDGFCLFQR+ST+NRGR  RA  R T E NS+  +VGGKGK RFLVV PS
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVV-PS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
           DCS            + S VRA+ +  +       Q GEKN+H HLNGS+SSS +SNHSQ
Sbjct: 61  DCS------------EESFVRAVLKNPS-------QQGEKNVHTHLNGSSSSSFSSNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKF+E MV  GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
           KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300

Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
           IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL  KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSK GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
            ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
           ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602

BLAST of MS001168 vs. ExPASy TrEMBL
Match: A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 6.0e-301
Identity = 526/622 (84.57%), Postives = 555/622 (89.23%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
           MD+TL AKHYTDGFCLFQR+ST+N  R  RA  R T E NS+   VGGKGK RFLV+ PS
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVI-PS 60

Query: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
           DCS            + S VRA+ +         LQ GEKNLH HLNGS+SSS +SNHSQ
Sbjct: 61  DCS------------EESFVRAVLK-------NPLQQGEKNLHTHLNGSSSSSFSSNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKF+E MV  GDIPD I CTSLIRGLCKTGKTRKA R
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAAR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
           KLK+AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM+ KGCKPDVVT+N
Sbjct: 241 KLKEAMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYN 300

Query: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
           IEYLDIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL  K CSPVLITYNTVIDG
Sbjct: 421 IEYLDIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSK GKTEDA+KLLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN
Sbjct: 481 LSKAGKTEDAVKLLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
            ITYNSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+
Sbjct: 541 VITYNSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLD 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 623
           ELCSRGV+KKSSAE+VV+KNSF
Sbjct: 601 ELCSRGVMKKSSAERVVIKNSF 602

BLAST of MS001168 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 881.7 bits (2277), Expect = 3.4e-256
Identity = 447/621 (71.98%), Postives = 511/621 (82.29%), Query Frame = 0

Query: 1   MDVTLPAKHYTDGFCLFQR-QSTRNRGRKARAGGRVTSEANSLRLYVGGKGKARFLVVPP 60
           MD+ +      +GFCL Q+      RG K     R TS + S ++ +G + + R      
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCR-TSGSISSKIPLGSRKRNR------ 60

Query: 61  SDCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGS-NSSSSASNH 120
                            L +V A S+V++   NGR Q  E    G+ N + N   S+ N 
Sbjct: 61  -----------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNS 120

Query: 121 SQSFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKA 180
           S + E+ E+NNHLR++VR GELEEGFKF+ENMV HG++PDII CT+LIRG C+ GKTRKA
Sbjct: 121 SFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA 180

Query: 181 TRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCD 240
            +++EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCD
Sbjct: 181 AKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCD 240

Query: 241 SGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVT 300
           SGKLKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEM+++GC PDVVT
Sbjct: 241 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 300

Query: 301 FNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMV 360
           +NVL+NGICKEGRLDEAIKFLN+MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+
Sbjct: 301 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 360

Query: 361 RKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMD 420
           RKG SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMD
Sbjct: 361 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 420

Query: 421 RAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVI 480
           RAIEYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLS+KGCSPVLITYNTVI
Sbjct: 421 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 480

Query: 481 DGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVR 540
           DGL+K GKT  AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+R
Sbjct: 481 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 540

Query: 541 PNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALEL 600
           PNA+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALEL
Sbjct: 541 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 597

Query: 601 LNELCSRGVVKKSSAEQVVVK 620
           LNELC++G++KKSSAEQV  K
Sbjct: 601 LNELCNKGLMKKSSAEQVAGK 597

BLAST of MS001168 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 448.7 bits (1153), Expect = 7.4e-126
Identity = 238/562 (42.35%), Postives = 340/562 (60.50%), Query Frame = 0

Query: 65  YGEKSHD-LISKQLSIVRAISRVDTFSSNGR--LQHGEKNLH--GHLNGSNSSSSASNHS 124
           Y   SH  L+S   S +   S  +  + NGR     G +NL      + +  +     HS
Sbjct: 23  YSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHS 82

Query: 125 QS--FEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRK 184
           QS  F + +      R  R+G   E    +E MV  G  PD+I CT LI+G        K
Sbjct: 83  QSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPK 142

Query: 185 ATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILR 244
           A RVMEILE  G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTYN ++ 
Sbjct: 143 AVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 202

Query: 245 TLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKP 304
           +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM ++G KP
Sbjct: 203 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 262

Query: 305 DVVTFNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 364
           D+ T+N +I G+CKEG +D A + + N+   GC+P+VI++NI+LR++ + G+W + EKL+
Sbjct: 263 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 322

Query: 365 AEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKE 424
            +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+  FC+E
Sbjct: 323 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 382

Query: 425 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITY 484
            ++D AIE+L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L   GCSP   +Y
Sbjct: 383 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 442

Query: 485 NTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEE 544
           NT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA     D+  
Sbjct: 443 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 502

Query: 545 MGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKE 604
               P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +LIEG+ + G   E
Sbjct: 503 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 562

Query: 605 ALELLNELCSRGVVKKSSAEQV 617
           A+EL N+L     + + S +++
Sbjct: 563 AMELANDLVRIDAISEYSFKRL 583

BLAST of MS001168 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 346.7 bits (888), Expect = 4.0e-95
Identity = 186/486 (38.27%), Postives = 291/486 (59.88%), Query Frame = 0

Query: 140 LEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 199
           L + F  +E++V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 200 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 259
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 260 CYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEGRLDEAI 319
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V++NVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 320 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 379
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 380 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 439
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 440 DIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 499
           +  TYN + +    + KV  A  I+  LS K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 500 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 559
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 560 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 619
           +R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of MS001168 vs. TAIR 10
Match: AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 4.4e-94
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0

Query: 123 EEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATRVM 182
           +E  NN  L  L  NG+L +  K VE M  H  +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 183 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 242
            ++  SG VPD ITYN++I   CK G I +AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 243 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTF 302
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VT+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 303 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 362
           N L+N  C+ G L+E    + ++ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 363 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 422
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 423 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVID 482
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L    C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 483 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 542
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 543 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 602
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +++G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of MS001168 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 328.9 bits (842), Expect = 8.5e-90
Identity = 167/488 (34.22%), Postives = 277/488 (56.76%), Query Frame = 0

Query: 135 VRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 194
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 195 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 254
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 255 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFNVLINGICKEG 314
           + + R+C P+ +TY  LI   CKE+ V +A +L   + +KG  PDV TFN LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 315 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 374
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 375 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 434
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 435 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDGLSKVGKTEDA 494
           G  PD  TYN+LLT  C+ G +  A +I+  +++ GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 495 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 554
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 555 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 614
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 615 KKSSAEQV 617
            +     V
Sbjct: 715 SEEEVSMV 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132179.10.0e+0099.68pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia][more]
XP_038886112.10.0e+0091.97pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida][more]
XP_008444958.10.0e+0089.25PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... [more]
XP_011649703.10.0e+0087.80pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... [more]
XP_023546483.12.7e-30385.21pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
Q3EDF84.8e-25571.98Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR001.0e-12442.35Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
A3KPF85.6e-9438.27Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q9FRS46.2e-9337.89Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... [more]
Q9LFF11.2e-8834.22Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1BSC20.0e+0099.68pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... [more]
A0A5A7VFH10.0e+0089.25Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BB350.0e+0089.25pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1HFE36.4e-30385.05pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1K4046.0e-30184.57pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
AT1G09900.13.4e-25671.98Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G04760.17.4e-12642.35Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G79080.14.0e-9538.27Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08610.14.4e-9437.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.18.5e-9034.22Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 539..587
e-value: 2.6E-12
score: 46.8
coord: 472..517
e-value: 1.7E-15
score: 57.0
coord: 294..343
e-value: 1.4E-17
score: 63.6
coord: 399..448
e-value: 1.3E-15
score: 57.3
coord: 224..273
e-value: 4.6E-14
score: 52.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 227..261
e-value: 2.7E-6
score: 25.2
coord: 403..436
e-value: 4.8E-9
score: 33.8
coord: 297..331
e-value: 1.0E-9
score: 35.9
coord: 161..194
e-value: 6.3E-5
score: 20.9
coord: 195..221
e-value: 1.9E-7
score: 28.8
coord: 542..576
e-value: 4.0E-7
score: 27.8
coord: 332..366
e-value: 6.5E-9
score: 33.4
coord: 262..296
e-value: 8.9E-7
score: 26.7
coord: 437..469
e-value: 2.3E-8
score: 31.7
coord: 507..541
e-value: 9.0E-8
score: 29.8
coord: 472..506
e-value: 6.2E-11
score: 39.8
coord: 367..400
e-value: 5.3E-8
score: 30.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 360..392
e-value: 1.6E-12
score: 46.9
coord: 189..221
e-value: 1.0E-12
score: 47.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 400..434
score: 12.24383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 470..504
score: 12.83574
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 330..364
score: 12.572669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..223
score: 11.257313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 12.342482
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 158..192
score: 10.775016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 575..609
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 540..574
score: 11.597113
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 365..399
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 435..469
score: 13.098811
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 13.844179
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 505..539
score: 12.92343
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 71..253
e-value: 5.5E-33
score: 116.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 324..394
e-value: 2.3E-21
score: 78.2
coord: 254..323
e-value: 1.1E-25
score: 92.2
coord: 535..605
e-value: 8.3E-17
score: 63.3
coord: 464..534
e-value: 1.5E-22
score: 82.1
coord: 395..463
e-value: 3.7E-22
score: 80.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..124
NoneNo IPR availablePANTHERPTHR47932:SF45OS02G0565400 PROTEINcoord: 75..619
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 75..619
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 370..501

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001168.1MS001168.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding