MS001121 (gene) Bitter gourd (TR) v1

Overview
NameMS001121
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold36: 1606746 .. 1608157 (+)
RNA-Seq ExpressionMS001121
SyntenyMS001121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGTTCACTTCCTTCTCGAAGCATGGAGGCCTATATCATCACTTATTTCGCCATCGCCAGTCAACTCTTTCTGCACCATTTCTGCGGTATCTCCCAAAACCCTAAAATACGGAGGCGACGATGACAACTTCAAGCGGGAATCTAAGAAAATCAAATTACCTCGGAGTAGTGTAACCACCGTGCTTCAGAGTGGCAACCGTGAGACTCAAAGGATTTCAATCACTAAGCTCCGGAAGGTCACCAAAAAGCTTTGCAAATCGAAGCGCTTTGCGTCAGCGCTAGAGGTTGGCAACTAGCAGTTTGGAAATTGAAATTTCTTACCTCGTTTTCATTTCAATGGAAGAATACATCAAGATCACAGAATATTTCATCTCACTATATATGATTCATAGATCGTGATAACAGGTAGAATTCAATATATTCTTATATCCAGGTACTAATGTTGATGGAAACTCGAAATAAATTGCGTATGTCACCGGCTGATCATGCTCTCAGATTGGAATTGACTATCAAACTGCACGGTTTACTGGAAGCTGAAGAGTACTTCAGTAAATTGCCCAACATAGCCTCTCAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGACAGGAACACCGAGAAAGCTGAGGCTTTCATGATGAAGCTTAAGGACTTGGGACTGGTTGTGGAGCCGCATCTTTACAATGAGATGATGAAACTGTATGTGGCGACATCTCAAAATGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAAATGTATGGGGTTGGGTCAGTGGAGTGGGTGCACAAAGAAATGCTGAAAGACGAAAACGTTCAAGTGGGATGGAGCACTCTATCTACTCTGGCTAAAGTTTACATAGAGGCAGGCGTTGTTGAGAAAGCGTTTTCAGCTTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTGATCACATTATATGCTTCTCTGAACAATAAAGAGGGAGTTCTTCGACTTTGGAGAGCTAGCAAAGCTGTAATTGGCAGACCCACTTGTGCTAATTATATGTGTCTGCTTCTATGTTTGGTGAAGCTAGGAGAGATTGAAGAGGCTGAGAAAAAATTTAAGGAATGGGAACTCAGTTGTCGTAATTACGACATTAGAGTTTCCAATGTTCTTCTGGGTGCATATGTGAGGAATGGATTGTTAGAAAAAGCCGAGTCGTTGCATCTGCGCACATTGGAGAGAGGTGGGAGTCCAAATTATAAGACATGGGAGATTCTCATGGAGGGATGGATGAAGAGGCAAAACATGGATAGAGCTATTGATTCTCTCAAGAAAGATTATGATTTGTTGAAACAC

mRNA sequence

AGAGTTCACTTCCTTCTCGAAGCATGGAGGCCTATATCATCACTTATTTCGCCATCGCCAGTCAACTCTTTCTGCACCATTTCTGCGGTATCTCCCAAAACCCTAAAATACGGAGGCGACGATGACAACTTCAAGCGGGAATCTAAGAAAATCAAATTACCTCGGAGTAGTGTAACCACCGTGCTTCAGAGTGGCAACCGTGAGACTCAAAGGATTTCAATCACTAAGCTCCGGAAGGTCACCAAAAAGCTTTGCAAATCGAAGCGCTTTGCGTCAGCGCTAGAGGTACTAATGTTGATGGAAACTCGAAATAAATTGCGTATGTCACCGGCTGATCATGCTCTCAGATTGGAATTGACTATCAAACTGCACGGTTTACTGGAAGCTGAAGAGTACTTCAGTAAATTGCCCAACATAGCCTCTCAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGACAGGAACACCGAGAAAGCTGAGGCTTTCATGATGAAGCTTAAGGACTTGGGACTGGTTGTGGAGCCGCATCTTTACAATGAGATGATGAAACTGTATGTGGCGACATCTCAAAATGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAAATGTATGGGGTTGGGTCAGTGGAGTGGGTGCACAAAGAAATGCTGAAAGACGAAAACGTTCAAGTGGGATGGAGCACTCTATCTACTCTGGCTAAAGTTTACATAGAGGCAGGCGTTGTTGAGAAAGCGTTTTCAGCTTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTGATCACATTATATGCTTCTCTGAACAATAAAGAGGGAGTTCTTCGACTTTGGAGAGCTAGCAAAGCTGTAATTGGCAGACCCACTTGTGCTAATTATATGTGTCTGCTTCTATGTTTGGTGAAGCTAGGAGAGATTGAAGAGGCTGAGAAAAAATTTAAGGAATGGGAACTCAGTTGTCGTAATTACGACATTAGAGTTTCCAATGTTCTTCTGGGTGCATATGTGAGGAATGGATTGTTAGAAAAAGCCGAGTCGTTGCATCTGCGCACATTGGAGAGAGGTGGGAGTCCAAATTATAAGACATGGGAGATTCTCATGGAGGGATGGATGAAGAGGCAAAACATGGATAGAGCTATTGATTCTCTCAAGAAAGATTATGATTTGTTGAAACAC

Coding sequence (CDS)

AGAGTTCACTTCCTTCTCGAAGCATGGAGGCCTATATCATCACTTATTTCGCCATCGCCAGTCAACTCTTTCTGCACCATTTCTGCGGTATCTCCCAAAACCCTAAAATACGGAGGCGACGATGACAACTTCAAGCGGGAATCTAAGAAAATCAAATTACCTCGGAGTAGTGTAACCACCGTGCTTCAGAGTGGCAACCGTGAGACTCAAAGGATTTCAATCACTAAGCTCCGGAAGGTCACCAAAAAGCTTTGCAAATCGAAGCGCTTTGCGTCAGCGCTAGAGGTACTAATGTTGATGGAAACTCGAAATAAATTGCGTATGTCACCGGCTGATCATGCTCTCAGATTGGAATTGACTATCAAACTGCACGGTTTACTGGAAGCTGAAGAGTACTTCAGTAAATTGCCCAACATAGCCTCTCAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGACAGGAACACCGAGAAAGCTGAGGCTTTCATGATGAAGCTTAAGGACTTGGGACTGGTTGTGGAGCCGCATCTTTACAATGAGATGATGAAACTGTATGTGGCGACATCTCAAAATGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAAATGTATGGGGTTGGGTCAGTGGAGTGGGTGCACAAAGAAATGCTGAAAGACGAAAACGTTCAAGTGGGATGGAGCACTCTATCTACTCTGGCTAAAGTTTACATAGAGGCAGGCGTTGTTGAGAAAGCGTTTTCAGCTTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTGATCACATTATATGCTTCTCTGAACAATAAAGAGGGAGTTCTTCGACTTTGGAGAGCTAGCAAAGCTGTAATTGGCAGACCCACTTGTGCTAATTATATGTGTCTGCTTCTATGTTTGGTGAAGCTAGGAGAGATTGAAGAGGCTGAGAAAAAATTTAAGGAATGGGAACTCAGTTGTCGTAATTACGACATTAGAGTTTCCAATGTTCTTCTGGGTGCATATGTGAGGAATGGATTGTTAGAAAAAGCCGAGTCGTTGCATCTGCGCACATTGGAGAGAGGTGGGAGTCCAAATTATAAGACATGGGAGATTCTCATGGAGGGATGGATGAAGAGGCAAAACATGGATAGAGCTATTGATTCTCTCAAGAAAGATTATGATTTGTTGAAACAC

Protein sequence

RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLKH
Homology
BLAST of MS001121 vs. NCBI nr
Match: XP_022132148.1 (pentatricopeptide repeat-containing protein At5g27460-like [Momordica charantia])

HSP 1 Score: 833.6 bits (2152), Expect = 7.8e-238
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT
Sbjct: 12  RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 71

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT
Sbjct: 72  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 131

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL
Sbjct: 132 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 191

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML
Sbjct: 192 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 251

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
           KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK
Sbjct: 252 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 311

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL
Sbjct: 312 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 371

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLLEKAE LHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK
Sbjct: 372 LGAYVRNGLLEKAELLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 431

Query: 421 H 422
           H
Sbjct: 432 H 432

BLAST of MS001121 vs. NCBI nr
Match: XP_022997144.1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxima])

HSP 1 Score: 661.4 bits (1705), Expect = 5.3e-186
Identity = 334/420 (79.52%), Postives = 377/420 (89.76%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R+HFLL AWRPISS    SPV+S   ISAVSPKTL+ GGD+ NFK++  K+K PRSSVTT
Sbjct: 28  RIHFLLRAWRPISS--HTSPVDSSDIISAVSPKTLQKGGDNGNFKQDFMKLKQPRSSVTT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR+V KKLCKSKRF  ALEVLMLMET+NK+RMSPADHALRLELT
Sbjct: 88  VLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALEVLMLMETQNKIRMSPADHALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK+HGLL+AEE+F++LPNIASQKASSL LLHGYVK++NTEKAEAFM KLK LGLVV+PHL
Sbjct: 148 IKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVKEQNTEKAEAFMAKLKGLGLVVDPHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVI+DMKQNQI+RNVLSYNLWMNACSE+YGVGSVE V++EML
Sbjct: 208 YNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLSYNLWMNACSELYGVGSVELVYEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVY +AG+V KAF+AL++AEKKLS  NRLGYFFLITLYA+LN+K
Sbjct: 268 SDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREAEKKLSSGNRLGYFFLITLYATLNDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+W ASKAV  RPTCANYMC+LLCLVKLG+I EAEK FKEWEL CRNYDIRVSNVL
Sbjct: 328 EGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDINEAEKIFKEWELDCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLL++AESLH+ TLERGG+PNYKTWEILMEG ++ QN+DR I+ L  D+  LK
Sbjct: 388 LGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEILMEGCVRSQNLDRGINFLNNDFAGLK 445

BLAST of MS001121 vs. NCBI nr
Match: XP_023545813.1 (pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 658.7 bits (1698), Expect = 3.4e-185
Identity = 336/420 (80.00%), Postives = 374/420 (89.05%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R+HFLL AWRPISS    SPV+S   ISAVSPKTL+ GGD+ NFK++  K+K PRSSVTT
Sbjct: 28  RIHFLLRAWRPISS--HTSPVDSSDIISAVSPKTLQKGGDNGNFKQDFMKLKSPRSSVTT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR+V KKLCKSKRF  ALEVLMLMET+NK+RMSPADHALRLELT
Sbjct: 88  VLQSGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMLMETQNKIRMSPADHALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IKLHGLL+AEE F++LPNIASQKASSL LLHGYVK++NTEKAEAFM KLK LGLVV+PHL
Sbjct: 148 IKLHGLLKAEELFNQLPNIASQKASSLLLLHGYVKEKNTEKAEAFMAKLKGLGLVVDPHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVI+DMKQN I+RNVLSYNLWMNACSE+YGV SVE V++EML
Sbjct: 208 YNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLSYNLWMNACSELYGVRSVELVYEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVY +AG+V KAF+ALK AEKKLS  NRLGYFFLITLYA+LN+K
Sbjct: 268 SDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAAEKKLSSGNRLGYFFLITLYATLNDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+W ASKAV  RPTCANYMC+LLCLVKLG+I EAEK F+EWEL CRNYDIRVSNVL
Sbjct: 328 EGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDIHEAEKIFQEWELDCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLLEKAESLH+ TLERGG+PNYKTWEILMEG ++ QN+DR I+ LK D+  LK
Sbjct: 388 LGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEILMEGCVRSQNLDRGINFLKNDFAGLK 445

BLAST of MS001121 vs. NCBI nr
Match: KAG6598713.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 656.0 bits (1691), Expect = 2.2e-184
Identity = 333/420 (79.29%), Postives = 374/420 (89.05%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R+HFLL AWRPISS    SPV+S   ISAVSPKTL+ GGD+ NFK++  K+K PRSSVTT
Sbjct: 28  RIHFLLRAWRPISS--HTSPVDSSDIISAVSPKTLQKGGDNGNFKQDFMKLKQPRSSVTT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR+V KKLCKSKRF  ALE LMLMET+NK+RMSPADHALRLELT
Sbjct: 88  VLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALEALMLMETQNKIRMSPADHALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK+HGLL+AEE+F++LPNIASQKASSL LLHGYVK++NTEKAEAFM KLK LGLVV+PHL
Sbjct: 148 IKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVKEKNTEKAEAFMAKLKGLGLVVDPHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVI+DMKQN I+RNVLSYNLWMNACSE+YGV SVE V++EML
Sbjct: 208 YNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLSYNLWMNACSELYGVRSVELVYEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVY +AG+V KAF+ALK AEKKLS  NRLGYFFLITLYA+LN+K
Sbjct: 268 SDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAAEKKLSSGNRLGYFFLITLYATLNDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+W ASKAV  RPTCANYMC+LLCLVKLG+I EAEK FKEWEL CRNYDIRVSNVL
Sbjct: 328 EGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDINEAEKIFKEWELDCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLLEKAESLH+ TLERGG+PNYKTWEILMEG ++ QN+DR I+ L+ ++  LK
Sbjct: 388 LGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEILMEGCVRSQNLDRGINFLENNFAGLK 445

BLAST of MS001121 vs. NCBI nr
Match: XP_038885083.1 (pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida])

HSP 1 Score: 654.1 bits (1686), Expect = 8.4e-184
Identity = 333/415 (80.24%), Postives = 371/415 (89.40%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R+HFL +AW+PISSL   SPV+S   ISAVSPKTL+   DD N K+E  K+KLPRSSV+T
Sbjct: 41  RIHFLFQAWKPISSL--TSPVDSLSNISAVSPKTLQNSVDDGNSKQEFMKLKLPRSSVST 100

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSG  E QR SITKLR+V KKL  SKRF  ALEVLMLMETR+ LRMSPA+HALRLELT
Sbjct: 101 VLQSGKCEAQRTSITKLRRVVKKLYTSKRFERALEVLMLMETRDNLRMSPAEHALRLELT 160

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK+HG+L+AEEYF++LP IASQKASSLPLLHGYVK RNTEKAEAFM+KL+DLGLVV  HL
Sbjct: 161 IKVHGVLKAEEYFNQLPTIASQKASSLPLLHGYVKGRNTEKAEAFMVKLRDLGLVVNHHL 220

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVIRDMKQNQI RNVLSYNLWMNACSE+YGVGSVE V +EML
Sbjct: 221 YNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACSEVYGVGSVELVFEEML 280

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVYI+  +V+KAF+ALKDAEKKLSPCNRLGYFFLITLYASL +K
Sbjct: 281 TDKNVQVGWSTLSTLAKVYIQEDLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDK 340

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           +GV R+WRASKAV GRPTCANYMC+LLCLVK+G+I+EAEK FKEWEL+CRNYDIRVSNVL
Sbjct: 341 KGVSRVWRASKAVSGRPTCANYMCILLCLVKVGDIDEAEKVFKEWELNCRNYDIRVSNVL 400

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMK-RQNMDRAIDSLKK 415
           LGAYVRNGLLEKAESLH+ TL RGGSPNYKTWEILMEGW + +QN+DRAI  L+K
Sbjct: 401 LGAYVRNGLLEKAESLHMHTLGRGGSPNYKTWEILMEGWARNQQNVDRAISFLRK 453

BLAST of MS001121 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 9.6e-114
Identity = 211/371 (56.87%), Postives = 276/371 (74.39%), Query Frame = 0

Query: 54  PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADH 113
           PR SVT++LQ        +S+++LR ++K+L +S R+  AL+++  ME +  +  S  D 
Sbjct: 50  PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDI 109

Query: 114 ALRLELTIKLHGLLEAEEYFSKL----PNIASQKASSLPLLHGYVKDRNTEKAEAFMMKL 173
           ALRL+L IK HGL + EEYF KL     ++   K++ LPLL  YVK++  ++AEA M KL
Sbjct: 110 ALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKL 169

Query: 174 KDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGV 233
             LG +V PH +NEMMKLY A+ Q EKV +V+  MK N+I RNVLSYNLWMNAC E+ GV
Sbjct: 170 NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGV 229

Query: 234 GSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFF 293
            +VE V+KEM+ D++V+VGWS+L TLA VYI++G  EKA   L+DAEK L+  NRLGYFF
Sbjct: 230 AAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFF 289

Query: 294 LITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSC 353
           LITLYASL NKEGV+RLW  SK+V GR +C NY+C+L  LVK G++EEAE+ F EWE  C
Sbjct: 290 LITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQC 349

Query: 354 RNYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAI 413
            NYD+RVSNVLLGAYVRNG + KAESLH   LERGG+PNYKTWEILMEGW+K +NM++AI
Sbjct: 350 FNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAI 409

Query: 414 DSLKKDYDLLK 421
           D++ + + L++
Sbjct: 410 DAMHQVFVLMR 420

BLAST of MS001121 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-62
Identity = 145/426 (34.04%), Postives = 238/426 (55.87%), Query Frame = 0

Query: 5   LLEAWRPISSL--ISPSPVNSFCTISAVSPKTLKYGGDDDNFKRES--------KKIKL- 64
           LL    P+ S+  +S       C+IS V      YG    +++R          KKI L 
Sbjct: 23  LLRCRSPVVSVAALSKKTAAIVCSISQV------YGYGTVDYERRPIVQWNAIYKKISLM 82

Query: 65  --PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETR-NKLRMSP 124
             P     +VL    +  ++++  +L +V K+L K KR   ALEV   M  R  + R+S 
Sbjct: 83  EKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSA 142

Query: 125 ADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLK 184
           +D A++L+L  K+ G+ +AEE+F +LP     +     LL+ YV+ ++ EKAEA +  ++
Sbjct: 143 SDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMR 202

Query: 185 DLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVG 244
           D G  + P  +N MM LY+   + +KV  ++ +MKQ  I  ++ SYN+W+++C  +  V 
Sbjct: 203 DKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVE 262

Query: 245 SVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFL 304
            +E V+++M  D ++   W+T ST+A +YI+ G  EKA  AL+  E +++  NR+ Y +L
Sbjct: 263 KMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYL 322

Query: 305 ITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCR 364
           ++LY SL NK+ + R+W   K+V+       Y  L+  LV++G+IE AEK ++EW     
Sbjct: 323 LSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKS 382

Query: 365 NYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAID 417
           +YD R+ N+L+ AYV+N  LE AE L    +E GG P+  TWEIL  G  +++ +  A+ 
Sbjct: 383 SYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALT 442

BLAST of MS001121 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-59
Identity = 123/333 (36.94%), Postives = 192/333 (57.66%), Query Frame = 0

Query: 82  KKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELTIKLHGLLEAEEYFSKLPNIAS 141
           KKL     +  AL++  +ME R  +  + +D A+ L+L  K   +   E YF  LP  + 
Sbjct: 63  KKLRNRGLYYPALKLSEVMEERG-MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 142 QKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHLYNEMMKLYVATSQNEKVPLVI 201
            + +   LL+ Y K+  TEKAE  + K+K+L +      YN +M LY  T + EKVP +I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 202 RDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEMLKDENVQVGWSTLSTLAKVYIE 261
           +++K   +M +  +YN+WM A +    +  VE V +EM +D  V   W+T S +A +Y++
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 262 AGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRASKAVIGRPTCAN 321
           AG+ +KA  AL++ E K +  +   Y FLITLY  L     V R+WR+ +  I + +   
Sbjct: 243 AGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVA 302

Query: 322 YMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVLLGAYVRNGLLEKAESLHLRTL 381
           Y+ ++  LVKL ++  AE  FKEW+ +C  YDIR+ NVL+GAY + GL++KA  L  +  
Sbjct: 303 YLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAP 362

Query: 382 ERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKK 415
            RGG  N KTWEI M+ ++K  +M RA++ + K
Sbjct: 363 RRGGKLNAKTWEIFMDYYVKSGDMARALECMSK 394

BLAST of MS001121 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-55
Identity = 126/392 (32.14%), Postives = 219/392 (55.87%), Query Frame = 0

Query: 29  AVSPKTLKYGGDDDNFKRESKKIKLPRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSK 88
           + + K    GG D    R    +   RS+V T+ +    E   +   +L ++ ++L K K
Sbjct: 49  SANKKETVVGGRDTLGGRLLSLVYTKRSAVVTI-RKWKEEGHSVRKYELNRIVRELRKIK 108

Query: 89  RFASALEVLMLMETRNKLRMSPADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLP 148
           R+  ALE+   M  +  +++   D+A+ L+L  K+ GL  AE++F  +P+     A+   
Sbjct: 109 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 168

Query: 149 LLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQ 208
           LLH YV+++ ++KAEA   K+ + G +     YN M+ +Y++  Q EKVP++I+++K  +
Sbjct: 169 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IR 228

Query: 209 IMRNVLSYNLWMNACSEMYGVGSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKA 268
              ++++YNLW+ A +    V   E V+ +  K+E +   W T S L  +Y +   VEKA
Sbjct: 229 TSPDIVTYNLWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKA 288

Query: 269 FSALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLC 328
             ALK+ EK +S  NR+ Y  LI+L+A+L +K+GV   W+  K+   +   A Y+ ++  
Sbjct: 289 RLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISA 348

Query: 329 LVKLGEIEEAEKKFKEWELSCRNYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPN 388
           +VKLGE E+A+  + EWE      D R+ N++L  Y+    +   E  + R +E+G +P+
Sbjct: 349 VVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS 408

Query: 389 YKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 421
           Y TWEIL   ++KR++M++ +D   K  D +K
Sbjct: 409 YSTWEILTWAYLKRKDMEKVLDCFGKAIDSVK 437

BLAST of MS001121 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-51
Identity = 118/360 (32.78%), Postives = 194/360 (53.89%), Query Frame = 0

Query: 54  PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADH 113
           P+SSV   LQ+  +  +++S+ +L ++   L + KRF  ALEV   M        SP +H
Sbjct: 37  PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96

Query: 114 ALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLG 173
           A+ L+L  +++G + AEEYF  L        +   LL+ YV+ +N EK+     K+K++G
Sbjct: 97  AVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMG 156

Query: 174 LVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVE 233
            V     YN +M LY    Q+EKVP V+ +MK+  +  +  SY + +NA   MY +  + 
Sbjct: 157 FVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIG 216

Query: 234 WVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITL 293
              ++M + +++ + W+T +  AK YI+ G  ++A   LK +E +L   +  GY  LITL
Sbjct: 217 GTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITL 276

Query: 294 YASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYD 353
           YA L  K  VLRLW   K V  R    +Y+ +L  LVK+  + EAE+   EW+ S   YD
Sbjct: 277 YARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYD 336

Query: 354 IRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLK 413
            RV N ++  Y+   + EKAE++      RG +   ++WE++   + ++  ++ A   +K
Sbjct: 337 FRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMK 396

BLAST of MS001121 vs. ExPASy TrEMBL
Match: A0A6J1BVG4 (pentatricopeptide repeat-containing protein At5g27460-like OS=Momordica charantia OX=3673 GN=LOC111005082 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 3.8e-238
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT
Sbjct: 12  RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 71

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT
Sbjct: 72  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 131

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL
Sbjct: 132 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 191

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML
Sbjct: 192 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 251

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
           KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK
Sbjct: 252 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 311

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL
Sbjct: 312 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 371

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLLEKAE LHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK
Sbjct: 372 LGAYVRNGLLEKAELLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 431

Query: 421 H 422
           H
Sbjct: 432 H 432

BLAST of MS001121 vs. ExPASy TrEMBL
Match: A0A6J1KAM1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492138 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.6e-186
Identity = 334/420 (79.52%), Postives = 377/420 (89.76%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R+HFLL AWRPISS    SPV+S   ISAVSPKTL+ GGD+ NFK++  K+K PRSSVTT
Sbjct: 28  RIHFLLRAWRPISS--HTSPVDSSDIISAVSPKTLQKGGDNGNFKQDFMKLKQPRSSVTT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR+V KKLCKSKRF  ALEVLMLMET+NK+RMSPADHALRLELT
Sbjct: 88  VLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALEVLMLMETQNKIRMSPADHALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK+HGLL+AEE+F++LPNIASQKASSL LLHGYVK++NTEKAEAFM KLK LGLVV+PHL
Sbjct: 148 IKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVKEQNTEKAEAFMAKLKGLGLVVDPHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVI+DMKQNQI+RNVLSYNLWMNACSE+YGVGSVE V++EML
Sbjct: 208 YNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLSYNLWMNACSELYGVGSVELVYEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVY +AG+V KAF+AL++AEKKLS  NRLGYFFLITLYA+LN+K
Sbjct: 268 SDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREAEKKLSSGNRLGYFFLITLYATLNDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+W ASKAV  RPTCANYMC+LLCLVKLG+I EAEK FKEWEL CRNYDIRVSNVL
Sbjct: 328 EGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDINEAEKIFKEWELDCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLL++AESLH+ TLERGG+PNYKTWEILMEG ++ QN+DR I+ L  D+  LK
Sbjct: 388 LGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEILMEGCVRSQNLDRGINFLNNDFAGLK 445

BLAST of MS001121 vs. ExPASy TrEMBL
Match: A0A6J1HF62 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462481 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.9e-183
Identity = 330/420 (78.57%), Postives = 373/420 (88.81%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R++FLL AWRPISS    SPV+S   ISAVSPKTL+ GGD+ NFK++  K+K PRSSVTT
Sbjct: 28  RINFLLRAWRPISS--HTSPVDSSDIISAVSPKTLQKGGDNGNFKQDFMKLKQPRSSVTT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR+V KKLCK KRF  ALEVLMLMET+NK+RMSPADHALRLELT
Sbjct: 88  VLQSGNSEAQRTSITKLRRVVKKLCKPKRFERALEVLMLMETQNKIRMSPADHALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK+HGLL+AEE+F++LPNIASQKASSL LLHGYVK++NTEKAEAFM KLK LGLVV+PHL
Sbjct: 148 IKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVKEKNTEKAEAFMAKLKGLGLVVDPHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVATSQNEKVPLVI+DMKQN I+RNVLSYNLWMNACSE+YG  SVE V++EML
Sbjct: 208 YNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLSYNLWMNACSELYGFRSVELVYEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWSTLSTLAKVY +AG+V KAF+ALK AEKKLS  NRLGYFFLITLYA+LN+K
Sbjct: 268 SDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAAEKKLSSGNRLGYFFLITLYATLNDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+W ASKAV  RPTCANYMC+LLCLVKLG++ EAEK FKEWEL CRNYDIRVSNVL
Sbjct: 328 EGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDLNEAEKIFKEWELDCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 420
           LGAYVRNGLLEKAESLH+ TLERGG+PNYKTWEILMEG ++ QN+DR I+ L+ ++  LK
Sbjct: 388 LGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEILMEGCVRSQNLDRGINFLENNFAGLK 445

BLAST of MS001121 vs. ExPASy TrEMBL
Match: A0A5A7VI21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004540 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.4e-178
Identity = 321/413 (77.72%), Postives = 363/413 (87.89%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R++FLL+AWR ISSL   SPV+S  T S VS K L+ GGDD NFK+E +K+KLPR SV T
Sbjct: 28  RIYFLLQAWRSISSL--TSPVDSLATNSVVSSKILQNGGDDGNFKQEFRKLKLPRRSVNT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR V KK CK+KRF  AL+ LMLMETR+  RM PA++ALRLELT
Sbjct: 88  VLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALKALMLMETRDNFRMYPAEYALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK HGLL+AEEYF++LP IASQKASSLPLLHGYVK+RNTEKAEAFM+KL+DLGLVV  HL
Sbjct: 148 IKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLSYNLWMNACS++YGV S+E V +EML
Sbjct: 208 YNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSQVYGVRSIELVFEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWST+ TLAKVYI+ G+VEKAF+ALK+AEKKLSPC RLGYFFLITLYASL +K
Sbjct: 268 TDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+WRASKAV G PTCANYMC+LLCLVKLGE+++AEK FKEWE +CRNYDIRVSNVL
Sbjct: 328 EGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEMDKAEKVFKEWEFNCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMK-RQNMDRAIDSL 413
           LGAYVRNGLLEKAESLH  TL RGGSPNYKTWEILMEGW++ +QN+DRAI+ L
Sbjct: 388 LGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEILMEGWVRSQQNVDRAINFL 438

BLAST of MS001121 vs. ExPASy TrEMBL
Match: A0A1S3BBE1 (pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN=LOC103488093 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.4e-178
Identity = 321/413 (77.72%), Postives = 363/413 (87.89%), Query Frame = 0

Query: 1   RVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESKKIKLPRSSVTT 60
           R++FLL+AWR ISSL   SPV+S  T S VS K L+ GGDD NFK+E +K+KLPR SV T
Sbjct: 28  RIYFLLQAWRSISSL--TSPVDSLATNSVVSSKILQNGGDDGNFKQEFRKLKLPRRSVNT 87

Query: 61  VLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELT 120
           VLQSGN E QR SITKLR V KK CK+KRF  AL+ LMLMETR+  RM PA++ALRLELT
Sbjct: 88  VLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALKALMLMETRDNFRMYPAEYALRLELT 147

Query: 121 IKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHL 180
           IK HGLL+AEEYF++LP IASQKASSLPLLHGYVK+RNTEKAEAFM+KL+DLGLVV  HL
Sbjct: 148 IKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHL 207

Query: 181 YNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEML 240
           YNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLSYNLWMNACS++YGV S+E V +EML
Sbjct: 208 YNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNLWMNACSQVYGVRSIELVFEEML 267

Query: 241 KDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNK 300
            D+NVQVGWST+ TLAKVYI+ G+VEKAF+ALK+AEKKLSPC RLGYFFLITLYASL +K
Sbjct: 268 TDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDK 327

Query: 301 EGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVL 360
           EGVLR+WRASKAV G PTCANYMC+LLCLVKLGE+++AEK FKEWE +CRNYDIRVSNVL
Sbjct: 328 EGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEMDKAEKVFKEWEFNCRNYDIRVSNVL 387

Query: 361 LGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMK-RQNMDRAIDSL 413
           LGAYVRNGLLEKAESLH  TL RGGSPNYKTWEILMEGW++ +QN+DRAI+ L
Sbjct: 388 LGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEILMEGWVRSQQNVDRAINFL 438

BLAST of MS001121 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 411.8 bits (1057), Expect = 6.8e-115
Identity = 211/371 (56.87%), Postives = 276/371 (74.39%), Query Frame = 0

Query: 54  PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADH 113
           PR SVT++LQ        +S+++LR ++K+L +S R+  AL+++  ME +  +  S  D 
Sbjct: 50  PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDI 109

Query: 114 ALRLELTIKLHGLLEAEEYFSKL----PNIASQKASSLPLLHGYVKDRNTEKAEAFMMKL 173
           ALRL+L IK HGL + EEYF KL     ++   K++ LPLL  YVK++  ++AEA M KL
Sbjct: 110 ALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKL 169

Query: 174 KDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGV 233
             LG +V PH +NEMMKLY A+ Q EKV +V+  MK N+I RNVLSYNLWMNAC E+ GV
Sbjct: 170 NGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGV 229

Query: 234 GSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFF 293
            +VE V+KEM+ D++V+VGWS+L TLA VYI++G  EKA   L+DAEK L+  NRLGYFF
Sbjct: 230 AAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFF 289

Query: 294 LITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSC 353
           LITLYASL NKEGV+RLW  SK+V GR +C NY+C+L  LVK G++EEAE+ F EWE  C
Sbjct: 290 LITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQC 349

Query: 354 RNYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAI 413
            NYD+RVSNVLLGAYVRNG + KAESLH   LERGG+PNYKTWEILMEGW+K +NM++AI
Sbjct: 350 FNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAI 409

Query: 414 DSLKKDYDLLK 421
           D++ + + L++
Sbjct: 410 DAMHQVFVLMR 420

BLAST of MS001121 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.6e-63
Identity = 145/426 (34.04%), Postives = 238/426 (55.87%), Query Frame = 0

Query: 5   LLEAWRPISSL--ISPSPVNSFCTISAVSPKTLKYGGDDDNFKRES--------KKIKL- 64
           LL    P+ S+  +S       C+IS V      YG    +++R          KKI L 
Sbjct: 23  LLRCRSPVVSVAALSKKTAAIVCSISQV------YGYGTVDYERRPIVQWNAIYKKISLM 82

Query: 65  --PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETR-NKLRMSP 124
             P     +VL    +  ++++  +L +V K+L K KR   ALEV   M  R  + R+S 
Sbjct: 83  EKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSA 142

Query: 125 ADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLK 184
           +D A++L+L  K+ G+ +AEE+F +LP     +     LL+ YV+ ++ EKAEA +  ++
Sbjct: 143 SDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMR 202

Query: 185 DLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVG 244
           D G  + P  +N MM LY+   + +KV  ++ +MKQ  I  ++ SYN+W+++C  +  V 
Sbjct: 203 DKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVE 262

Query: 245 SVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFL 304
            +E V+++M  D ++   W+T ST+A +YI+ G  EKA  AL+  E +++  NR+ Y +L
Sbjct: 263 KMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYL 322

Query: 305 ITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCR 364
           ++LY SL NK+ + R+W   K+V+       Y  L+  LV++G+IE AEK ++EW     
Sbjct: 323 LSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKS 382

Query: 365 NYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAID 417
           +YD R+ N+L+ AYV+N  LE AE L    +E GG P+  TWEIL  G  +++ +  A+ 
Sbjct: 383 SYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALT 442

BLAST of MS001121 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 2.8e-60
Identity = 123/333 (36.94%), Postives = 192/333 (57.66%), Query Frame = 0

Query: 82  KKLCKSKRFASALEVLMLMETRNKLRMSPADHALRLELTIKLHGLLEAEEYFSKLPNIAS 141
           KKL     +  AL++  +ME R  +  + +D A+ L+L  K   +   E YF  LP  + 
Sbjct: 63  KKLRNRGLYYPALKLSEVMEERG-MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 142 QKASSLPLLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHLYNEMMKLYVATSQNEKVPLVI 201
            + +   LL+ Y K+  TEKAE  + K+K+L +      YN +M LY  T + EKVP +I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 202 RDMKQNQIMRNVLSYNLWMNACSEMYGVGSVEWVHKEMLKDENVQVGWSTLSTLAKVYIE 261
           +++K   +M +  +YN+WM A +    +  VE V +EM +D  V   W+T S +A +Y++
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 262 AGVVEKAFSALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRASKAVIGRPTCAN 321
           AG+ +KA  AL++ E K +  +   Y FLITLY  L     V R+WR+ +  I + +   
Sbjct: 243 AGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVA 302

Query: 322 YMCLLLCLVKLGEIEEAEKKFKEWELSCRNYDIRVSNVLLGAYVRNGLLEKAESLHLRTL 381
           Y+ ++  LVKL ++  AE  FKEW+ +C  YDIR+ NVL+GAY + GL++KA  L  +  
Sbjct: 303 YLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAP 362

Query: 382 ERGGSPNYKTWEILMEGWMKRQNMDRAIDSLKK 415
            RGG  N KTWEI M+ ++K  +M RA++ + K
Sbjct: 363 RRGGKLNAKTWEIFMDYYVKSGDMARALECMSK 394

BLAST of MS001121 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56
Identity = 126/392 (32.14%), Postives = 219/392 (55.87%), Query Frame = 0

Query: 29  AVSPKTLKYGGDDDNFKRESKKIKLPRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSK 88
           + + K    GG D    R    +   RS+V T+ +    E   +   +L ++ ++L K K
Sbjct: 49  SANKKETVVGGRDTLGGRLLSLVYTKRSAVVTI-RKWKEEGHSVRKYELNRIVRELRKIK 108

Query: 89  RFASALEVLMLMETRNKLRMSPADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLP 148
           R+  ALE+   M  +  +++   D+A+ L+L  K+ GL  AE++F  +P+     A+   
Sbjct: 109 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 168

Query: 149 LLHGYVKDRNTEKAEAFMMKLKDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQ 208
           LLH YV+++ ++KAEA   K+ + G +     YN M+ +Y++  Q EKVP++I+++K  +
Sbjct: 169 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IR 228

Query: 209 IMRNVLSYNLWMNACSEMYGVGSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKA 268
              ++++YNLW+ A +    V   E V+ +  K+E +   W T S L  +Y +   VEKA
Sbjct: 229 TSPDIVTYNLWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKA 288

Query: 269 FSALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLC 328
             ALK+ EK +S  NR+ Y  LI+L+A+L +K+GV   W+  K+   +   A Y+ ++  
Sbjct: 289 RLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISA 348

Query: 329 LVKLGEIEEAEKKFKEWELSCRNYDIRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPN 388
           +VKLGE E+A+  + EWE      D R+ N++L  Y+    +   E  + R +E+G +P+
Sbjct: 349 VVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPS 408

Query: 389 YKTWEILMEGWMKRQNMDRAIDSLKKDYDLLK 421
           Y TWEIL   ++KR++M++ +D   K  D +K
Sbjct: 409 YSTWEILTWAYLKRKDMEKVLDCFGKAIDSVK 437

BLAST of MS001121 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-52
Identity = 118/360 (32.78%), Postives = 194/360 (53.89%), Query Frame = 0

Query: 54  PRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMSPADH 113
           P+SSV   LQ+  +  +++S+ +L ++   L + KRF  ALEV   M        SP +H
Sbjct: 37  PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96

Query: 114 ALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKLKDLG 173
           A+ L+L  +++G + AEEYF  L        +   LL+ YV+ +N EK+     K+K++G
Sbjct: 97  AVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMG 156

Query: 174 LVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGVGSVE 233
            V     YN +M LY    Q+EKVP V+ +MK+  +  +  SY + +NA   MY +  + 
Sbjct: 157 FVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIG 216

Query: 234 WVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFFLITL 293
              ++M + +++ + W+T +  AK YI+ G  ++A   LK +E +L   +  GY  LITL
Sbjct: 217 GTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITL 276

Query: 294 YASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSCRNYD 353
           YA L  K  VLRLW   K V  R    +Y+ +L  LVK+  + EAE+   EW+ S   YD
Sbjct: 277 YARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYD 336

Query: 354 IRVSNVLLGAYVRNGLLEKAESLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAIDSLK 413
            RV N ++  Y+   + EKAE++      RG +   ++WE++   + ++  ++ A   +K
Sbjct: 337 FRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMK 396

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132148.17.8e-23899.76pentatricopeptide repeat-containing protein At5g27460-like [Momordica charantia][more]
XP_022997144.15.3e-18679.52pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxi... [more]
XP_023545813.13.4e-18580.00pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pep... [more]
KAG6598713.12.2e-18479.29Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_038885083.18.4e-18480.24pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q3E9119.6e-11456.87Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
Q8LPS62.2e-6234.04Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
O227143.9e-5936.94Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
Q9SY072.0e-5532.14Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q84JR31.8e-5132.78Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1BVG43.8e-23899.76pentatricopeptide repeat-containing protein At5g27460-like OS=Momordica charanti... [more]
A0A6J1KAM12.6e-18679.52pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita ma... [more]
A0A6J1HF625.9e-18378.57pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita mo... [more]
A0A5A7VI214.4e-17877.72Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BBE14.4e-17877.72pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN... [more]
Match NameE-valueIdentityDescription
AT5G27460.16.8e-11556.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G02150.11.6e-6334.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.12.8e-6036.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.11.4e-5632.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21705.11.3e-5232.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 402..421
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availablePANTHERPTHR45717:SF13OS02G0796400 PROTEINcoord: 23..421
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 23..421
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 254..414
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 171..225
e-value: 0.002
score: 18.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 322..345
e-value: 0.82
score: 10.1
coord: 358..384
e-value: 0.0032
score: 17.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 353..387
score: 9.448698
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 257..419
e-value: 6.1E-20
score: 73.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 44..230
e-value: 4.5E-10
score: 41.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001121.1MS001121.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding