MS001114 (gene) Bitter gourd (TR) v1

Overview
NameMS001114
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-H2 finger protein ATL11-like
Locationscaffold36: 1537116 .. 1538219 (+)
RNA-Seq ExpressionMS001114
SyntenyMS001114
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCTCAAGCTCCGACTCTGCTTCCTCAATCATGTCGTCACGTGGTCTCTCATCAATTTCTTCCTTCTGGTCGACATGTCGTCCCTCGTCGCCGCCCAGGACCCCGGAGGGTTACCCAGCCCGCCGGACATGTACCCCTTCAGGCAGACCATCAGCAAACGAATGGCCATCGTTTTAATCGTCCTGGTTTGCTTCTTCATCGTCCTCGCCGTCCTCTCCGTCTACACGCGCCAGTGCACCGATCAGCGCTTCGGCGGCCGCCTCGTCCTCTCCGGTCCCGGAGTACAGAACAACAGCCGATCCAGGAGGGCGGCGCGTGGGCTCGACGCGGCGGTCATCGCCACGTTCCCCACCTTCGTGTACTCCAACGTGAAGGGCGTCAAAATCGGGAAGGGGTCGCTGGAGTGCGCGGTTTGCTTGTCGGAATTCGAAGACGAGGACACCCTCCGACTGTTGCCGAAATGCAGCCACGTGTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGTCGCGCCAGTCTGGTCCCCAAACCGGGGGACGTGTCGTTCGCCGCTCTCCTCAATTCGGAATCGAATGAGGGAAATCGCGTCGGTGGATCGGGAAATGGGGATGTCATTCTTGGAATTCCGGAGGAGAATCGGAATCAGGATCAGAATCAGAATCGGGGTTTATTAAGTCCGAATCAGAACGTTCCGTTGCGATCCCGATCTTCGGGATGGCGATTGAGCGGATTGTTCCCACGATCCCAATCGACGGGGCACTACGAGCGGTTTACACTGAGGTTGCCGGAGGAGGTACGGAGCGAGCTGGTGAATTCGAATTTGAATCGTGCGAGGAGCTGCGTGGCGTTGCCGAGGATGCAGAGTTCGAGGCAGGGGTACAGGGGTGAGAATGGAAAGAGCCTGTTCGTGAGTAGCCGGAGCCGGAGCCGGAGCGGGCGGTCGGAGCGGCGGACGTTGTTTCCGACGACGGCGTTTTTTAGAAGGGAGGATGGGACTGAGAACGGAGACGCCGGTGGACGGCCGTTCAATCGGTTGCGGGATGCTGAAGCTGAAGCTGATGGCGATGGTCAAAGTCAACGA

mRNA sequence

GCCCTCAAGCTCCGACTCTGCTTCCTCAATCATGTCGTCACGTGGTCTCTCATCAATTTCTTCCTTCTGGTCGACATGTCGTCCCTCGTCGCCGCCCAGGACCCCGGAGGGTTACCCAGCCCGCCGGACATGTACCCCTTCAGGCAGACCATCAGCAAACGAATGGCCATCGTTTTAATCGTCCTGGTTTGCTTCTTCATCGTCCTCGCCGTCCTCTCCGTCTACACGCGCCAGTGCACCGATCAGCGCTTCGGCGGCCGCCTCGTCCTCTCCGGTCCCGGAGTACAGAACAACAGCCGATCCAGGAGGGCGGCGCGTGGGCTCGACGCGGCGGTCATCGCCACGTTCCCCACCTTCGTGTACTCCAACGTGAAGGGCGTCAAAATCGGGAAGGGGTCGCTGGAGTGCGCGGTTTGCTTGTCGGAATTCGAAGACGAGGACACCCTCCGACTGTTGCCGAAATGCAGCCACGTGTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGTCGCGCCAGTCTGGTCCCCAAACCGGGGGACGTGTCGTTCGCCGCTCTCCTCAATTCGGAATCGAATGAGGGAAATCGCGTCGGTGGATCGGGAAATGGGGATGTCATTCTTGGAATTCCGGAGGAGAATCGGAATCAGGATCAGAATCAGAATCGGGGTTTATTAAGTCCGAATCAGAACGTTCCGTTGCGATCCCGATCTTCGGGATGGCGATTGAGCGGATTGTTCCCACGATCCCAATCGACGGGGCACTACGAGCGGTTTACACTGAGGTTGCCGGAGGAGGTACGGAGCGAGCTGGTGAATTCGAATTTGAATCGTGCGAGGAGCTGCGTGGCGTTGCCGAGGATGCAGAGTTCGAGGCAGGGGTACAGGGGTGAGAATGGAAAGAGCCTGTTCGTGAGTAGCCGGAGCCGGAGCCGGAGCGGGCGGTCGGAGCGGCGGACGTTGTTTCCGACGACGGCGTTTTTTAGAAGGGAGGATGGGACTGAGAACGGAGACGCCGGTGGACGGCCGTTCAATCGGTTGCGGGATGCTGAAGCTGAAGCTGATGGCGATGGTCAAAGTCAACGA

Coding sequence (CDS)

GCCCTCAAGCTCCGACTCTGCTTCCTCAATCATGTCGTCACGTGGTCTCTCATCAATTTCTTCCTTCTGGTCGACATGTCGTCCCTCGTCGCCGCCCAGGACCCCGGAGGGTTACCCAGCCCGCCGGACATGTACCCCTTCAGGCAGACCATCAGCAAACGAATGGCCATCGTTTTAATCGTCCTGGTTTGCTTCTTCATCGTCCTCGCCGTCCTCTCCGTCTACACGCGCCAGTGCACCGATCAGCGCTTCGGCGGCCGCCTCGTCCTCTCCGGTCCCGGAGTACAGAACAACAGCCGATCCAGGAGGGCGGCGCGTGGGCTCGACGCGGCGGTCATCGCCACGTTCCCCACCTTCGTGTACTCCAACGTGAAGGGCGTCAAAATCGGGAAGGGGTCGCTGGAGTGCGCGGTTTGCTTGTCGGAATTCGAAGACGAGGACACCCTCCGACTGTTGCCGAAATGCAGCCACGTGTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGTCGCGCCAGTCTGGTCCCCAAACCGGGGGACGTGTCGTTCGCCGCTCTCCTCAATTCGGAATCGAATGAGGGAAATCGCGTCGGTGGATCGGGAAATGGGGATGTCATTCTTGGAATTCCGGAGGAGAATCGGAATCAGGATCAGAATCAGAATCGGGGTTTATTAAGTCCGAATCAGAACGTTCCGTTGCGATCCCGATCTTCGGGATGGCGATTGAGCGGATTGTTCCCACGATCCCAATCGACGGGGCACTACGAGCGGTTTACACTGAGGTTGCCGGAGGAGGTACGGAGCGAGCTGGTGAATTCGAATTTGAATCGTGCGAGGAGCTGCGTGGCGTTGCCGAGGATGCAGAGTTCGAGGCAGGGGTACAGGGGTGAGAATGGAAAGAGCCTGTTCGTGAGTAGCCGGAGCCGGAGCCGGAGCGGGCGGTCGGAGCGGCGGACGTTGTTTCCGACGACGGCGTTTTTTAGAAGGGAGGATGGGACTGAGAACGGAGACGCCGGTGGACGGCCGTTCAATCGGTTGCGGGATGCTGAAGCTGAAGCTGATGGCGATGGTCAAAGTCAACGA

Protein sequence

ALKLRLCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNVPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAEAEADGDGQSQR
Homology
BLAST of MS001114 vs. NCBI nr
Match: XP_022131441.1 (RING-H2 finger protein ATL11-like [Momordica charantia])

HSP 1 Score: 703.7 bits (1815), Expect = 8.1e-199
Identity = 364/371 (98.11%), Postives = 365/371 (98.38%), Query Frame = 0

Query: 1   ALKLRLCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGL-PSPPDMYPFRQTISKRMAIVL 60
           ALKLRLCFLNHVVTWSLINFFL V+MSSLVAAQDPGG  PSPPDMYPFRQTISKRMAIVL
Sbjct: 2   ALKLRLCFLNHVVTWSLINFFLPVNMSSLVAAQDPGGTPPSPPDMYPFRQTISKRMAIVL 61

Query: 61  IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF 120
           IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF
Sbjct: 62  IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF 121

Query: 121 VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA 180
           VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA
Sbjct: 122 VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA 181

Query: 181 SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRN--QDQNQNRGLLSPNQN 240
           SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRN  QDQNQNRGLLSPNQN
Sbjct: 182 SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQDQNQNRGLLSPNQN 241

Query: 241 VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS 300
           VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS
Sbjct: 242 VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS 301

Query: 301 RQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE 360
           RQGYRGENGKSLFVSSRSRSRSG SERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE
Sbjct: 302 RQGYRGENGKSLFVSSRSRSRSGGSERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE 361

Query: 361 AEADGDGQSQR 369
           AEADGDGQSQR
Sbjct: 362 AEADGDGQSQR 372

BLAST of MS001114 vs. NCBI nr
Match: XP_038884270.1 (RING-H2 finger protein ATL11-like [Benincasa hispida])

HSP 1 Score: 472.6 bits (1215), Expect = 3.0e-129
Identity = 273/382 (71.47%), Postives = 301/382 (78.80%), Query Frame = 0

Query: 8   FLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFI 67
           FLNHV    LI+F LL  + SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCFFI
Sbjct: 8   FLNHV----LIHFILLSQI-SLSAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCFFI 67

Query: 68  VLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGV 127
           VLAVLSVYTRQCTDQRFGGRL+LS      N+RSRRAARGLDAAVIATFPTFVYSNVK +
Sbjct: 68  VLAVLSVYTRQCTDQRFGGRLLLSTTQDGTNARSRRAARGLDAAVIATFPTFVYSNVKDL 127

Query: 128 KIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGD 187
           KIGKGSLECA+CLSEFED+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKPGD
Sbjct: 128 KIGKGSLECAICLSEFEDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGD 187

Query: 188 VSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPNQN 247
           +SFAALLNS+S       +EGNRV GS    V++ IPE N+ QD +    N+GL   N+N
Sbjct: 188 ISFAALLNSDSVIDGVGRDEGNRVTGSEISQVVVRIPEGNQGQDVSLITPNQGL---NRN 247

Query: 248 VPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARSCV 307
            P+RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARSCV
Sbjct: 248 GPIRSRSSGWRLSGLFPRSHSTGHSLTQRGEDYERYTLRLPEEVRSELLNSNLNRARSCV 307

Query: 308 ALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFP-TTAFFRREDGTE--NGDAG 367
           A PR+QSSRQGYR E GK+ FV   +RSRSGRSE RTL P  T  FRRE   +  NGD G
Sbjct: 308 AFPRVQSSRQGYRSELGKTGFVG--NRSRSGRSEWRTLLPAATPLFRREGSRKDVNGDGG 367

Query: 368 GRPFNRLRDAEAEADGDGQSQR 369
           GRPF RLR      DGDGQSQ+
Sbjct: 368 GRPFARLR-----PDGDGQSQQ 370

BLAST of MS001114 vs. NCBI nr
Match: XP_008444873.1 (PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo] >KAA0065125.1 RING-H2 finger protein ATL11-like [Cucumis melo var. makuwa])

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-125
Identity = 265/383 (69.19%), Postives = 295/383 (77.02%), Query Frame = 0

Query: 6   LCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCF 65
           L FLNHV       +F+L+   SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCF
Sbjct: 6   LFFLNHVFV-----YFILLSHVSLAAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCF 65

Query: 66  FIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVK 125
           FIV+AVLSVYTRQCT+QRFGGRL+L       N+RSRRAARGLDAAVIATFPTFVYSNVK
Sbjct: 66  FIVVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVK 125

Query: 126 GVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKP 185
            +KIGKGSLECA+CLSEF D+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKP
Sbjct: 126 DLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKP 185

Query: 186 GDVSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPN 245
           GD+SFAALLNS+S       +EGNR  G+ N  VI+ IPEEN+ QD N    N+GL   N
Sbjct: 186 GDISFAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGL---N 245

Query: 246 QNVPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARS 305
           Q+  +RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARS
Sbjct: 246 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARS 305

Query: 306 CVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE--NGDA 365
           CVA  RMQSSRQGYR E GK+  V   +RSRSGRSE RTL P    F+RE   +  NGD 
Sbjct: 306 CVAFQRMQSSRQGYRNELGKNGLVG--NRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDD 365

Query: 366 GGRPFNRLRDAEAEADGDGQSQR 369
           GGRPF RLR     AD DGQSQ+
Sbjct: 366 GGRPFARLR-----ADCDGQSQQ 369

BLAST of MS001114 vs. NCBI nr
Match: XP_004152750.1 (RING-H2 finger protein ATL11 [Cucumis sativus] >KGN62719.1 hypothetical protein Csa_022057 [Cucumis sativus])

HSP 1 Score: 459.1 bits (1180), Expect = 3.5e-125
Identity = 262/383 (68.41%), Postives = 293/383 (76.50%), Query Frame = 0

Query: 6   LCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCF 65
           L F+NHV       +F+L+   SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCF
Sbjct: 6   LFFVNHVFI-----YFILLSHVSLTAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCF 65

Query: 66  FIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVK 125
           FIV+AVLSVYTRQCT+QRFGGRL+L  P    N+RSRRAARGLDAAVIATFPTFVYSNVK
Sbjct: 66  FIVVAVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYSNVK 125

Query: 126 GVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKP 185
            +KIGKGSLECA+CLSEF D+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKP
Sbjct: 126 DLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKP 185

Query: 186 GDVSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPN 245
           GD+SFAALLNS+S       +EGNR  GS N  V++ IPEEN+ QD N    N+GL   N
Sbjct: 186 GDISFAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGL---N 245

Query: 246 QNVPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARS 305
           Q+  +RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARS
Sbjct: 246 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARS 305

Query: 306 CVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE--NGDA 365
           CVA  RMQSSRQGYR E GK+  V   +RSRSGR E RTL       +RE   +  NGD 
Sbjct: 306 CVAFQRMQSSRQGYRNELGKNGSVG--NRSRSGRPEWRTLLAAAPLLKREGSRKGVNGDE 365

Query: 366 GGRPFNRLRDAEAEADGDGQSQR 369
           GGRPF RLR      DGDGQSQ+
Sbjct: 366 GGRPFARLR-----PDGDGQSQQ 369

BLAST of MS001114 vs. NCBI nr
Match: XP_022997189.1 (RING-H2 finger protein ATL34-like [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 5.0e-124
Identity = 264/384 (68.75%), Postives = 293/384 (76.30%), Query Frame = 0

Query: 4   LRLCFLNHVVTWSLINFFLLVDMSSLVAAQDPG-GLPSPPDMYPFRQTISKRMAIVLIVL 63
           LR C   HV+T  LI+  LL  + SL AAQ  G  +PSPP+MY F+QTISKRMA+VLIVL
Sbjct: 6   LRRC---HVLTGFLIHSILLSHI-SLAAAQSGGPAVPSPPEMYSFKQTISKRMAVVLIVL 65

Query: 64  VCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYS 123
           VCFFIVLA+LSVYTRQC DQRFGG L+L       N R RRAARGLDAAVIA+FPTFVYS
Sbjct: 66  VCFFIVLALLSVYTRQCNDQRFGGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYS 125

Query: 124 NVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 183
           NVKG+KIGKG+LECAVCLSEFED++TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLV
Sbjct: 126 NVKGLKIGKGALECAVCLSEFEDDNTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV 185

Query: 184 PKPGDVSFAALLNSES----NEGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNV 243
           PKPGD+SFAALL+S+S    ++GNRV G  N  V + IPE N      QN+GL   NQN 
Sbjct: 186 PKPGDISFAALLDSDSRIHGDDGNRVAGLENCQVGIRIPEGN-----PQNQGL---NQNG 245

Query: 244 PLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARSCVA 303
           P+RSRS+GWRL GLFPRS STGH        YERFTLRLP EVRSEL+NSNLNRARSCVA
Sbjct: 246 PIRSRSTGWRLIGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVA 305

Query: 304 LPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE------NGD 363
           LPR+QSSRQGYR E GK+ FV   +RSRSGRSE  T FP T  FRRE          NGD
Sbjct: 306 LPRVQSSRQGYRSELGKNGFVG--NRSRSGRSEWWTFFPATPLFRREGSRNDANVNVNGD 365

Query: 364 AGGRPFNRLRDAEAEADGDGQSQR 369
            GGRPF RLRD     DG GQSQ+
Sbjct: 366 GGGRPFVRLRD-----DGHGQSQQ 370

BLAST of MS001114 vs. ExPASy Swiss-Prot
Match: Q84W40 (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 3.7e-53
Identity = 133/306 (43.46%), Postives = 186/306 (60.78%), Query Frame = 0

Query: 55  MAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNN--SRSRRAARGLDAAV 114
           MAI++IVLV  F  L   SVY R+C ++  G  +    P    N  + +R+ ARGLDA++
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 115 IATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHS 174
           I TFPTF YS VK ++IGK +LEC+VCL+EFED++TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 175 TCPVCRASLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVI--LGIPEENRNQDQNQNRG 234
           TCP+CRA L+P PG+   +  +    N+    G   NGD I  LG P+    +       
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVND--PPGSDPNGDRIRSLGSPDARLIESV----- 242

Query: 235 LLSPNQNVPLRSRSSGWRLSGLFPRSQSTGHY----ERFTLRLPEEVRSELVNSNLNRAR 294
            L+ NQ++P RS S+GW L+G+F  S  TG +    +RFTLRLP+++ ++LVN NL++  
Sbjct: 243 ALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQHSENLDRFTLRLPQDIHNKLVNPNLSKVH 302

Query: 295 SCVALPRMQSSRQGYR-GENG--KSLFVSSRSRSRSGRSERRTL-----FPTTAFFRRED 345
             VALP++ SS +GYR G  G  ++ F   R   + GR +RR       + T++      
Sbjct: 303 --VALPQVMSSTRGYRTGSLGSERNYFYYERF-DQDGRLDRRPFSITPPYRTSSINHMSP 356

BLAST of MS001114 vs. ExPASy Swiss-Prot
Match: Q9SK92 (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.7e-47
Identity = 127/302 (42.05%), Postives = 176/302 (58.28%), Query Frame = 0

Query: 48  RQTISKRMAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAAR- 107
           R + S   AI++IVLV  F  L  +SVY R+C     G   + SG G  N    R+    
Sbjct: 32  RTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALG---MDSGGGPGNWLNVRQTTEP 91

Query: 108 GLDAAVIATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDA 167
           GLDA+VI TFPTF YS VK ++IGK +LEC VCL+EFED++TLRL+P+C HVFH  CIDA
Sbjct: 92  GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 151

Query: 168 WLVSHSTCPVCRASLVPKPGD---VSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQ 227
           WL S +TCP+CRA+LVP PG+        L         R     N   +L  P+E R  
Sbjct: 152 WLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLRTPIDDNRKRVLTSPDE-RLI 211

Query: 228 DQNQNRGLLSPNQNVPLRSRSSGWRLSGLFPRSQSTG----HYERFTLRLPEEVRSELVN 287
           D     G    NQ++P +S S+GW+L+ L+  + S G    + +R+TLRLP+E+  +LVN
Sbjct: 212 DSVAWTG----NQSMPRKSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVN 271

Query: 288 SNLNR--ARSCVALPRMQSSRQGYR-GENG--KSLFVSSRSRSRSGRSERRTLFPTTAFF 337
           S+L +  ++  +ALP+ +SS +G+R G  G  K+ F   R   + GR +RR    T  + 
Sbjct: 272 SSLGKQGSKGQLALPQERSSVRGFRTGSLGTEKNYFYFERF-DQDGRLDRRPFSITPPYH 324

BLAST of MS001114 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-43
Identity = 127/333 (38.14%), Postives = 179/333 (53.75%), Query Frame = 0

Query: 18  INFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFIVLAVLSVYTR 77
           I F L++  + L A+Q   G  + P  Y     +S  MA+++++L+     +   S+Y R
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNY---GRLSPAMAVIVVILIAALFFMGFFSIYFR 74

Query: 78  QCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGVKIGKGSLECA 137
            C+     G  V    G ++ +    AARGLD +V+ TFPTF+YS+VK  K+GKG LECA
Sbjct: 75  HCSGVPDAG--VSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECA 134

Query: 138 VCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALLNSE 197
           +CL+EFED++TLRLLPKC HVFH  CIDAWL +H TCPVCRA+L  +  +        +E
Sbjct: 135 ICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTE 194

Query: 198 SN-EGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNVPLRSRSSGWRLSGLFPRS 257
            + E  +V  +    V   +PE+    + +  R    P   V L+           F RS
Sbjct: 195 PDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRR---LPGVPVDLKRVK--------FSRS 254

Query: 258 QSTGH--------YERFTLRLPEEVRSELVNS-NLNRARSCVALPRMQSSRQGYRGENGK 317
            +TGH         ERFTLRLPE+VR  ++    LNR  S + LPR  SSR+      GK
Sbjct: 255 HTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRR------GK 314

Query: 318 SLFVSSRSRSRSGRSERRTLFPTTAFFRREDGT 341
            +    RSR+RS R   R   P+  +  R+DG+
Sbjct: 315 PI---DRSRARSDRWLFRKT-PSFLWRSRDDGS 321

BLAST of MS001114 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-42
Identity = 122/341 (35.78%), Postives = 169/341 (49.56%), Query Frame = 0

Query: 9   LNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFIV 68
           + H+    L+ F LL      V+A  PG      D Y +  ++S  MA+V++V++     
Sbjct: 4   IKHISLPVLVLFLLL-----SVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFF 63

Query: 69  LAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGVK 128
           +   +VY R CT    G   V    G +    +   ARGLDA  I TFPTFVYS VK  K
Sbjct: 64  MGFFTVYIRHCTGAVDGS--VTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQK 123

Query: 129 IGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDV 188
           IGKG+LECA+CL+EFED++TLRLLPKC HVFH  CI AWL  H TCPVCR +L  +  + 
Sbjct: 124 IGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEP 183

Query: 189 SFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNVPLRSRSSGWR 248
                 + E+ + + V        ++ +P                               
Sbjct: 184 EVVVETDLEAQQQSAVPVP-----VVELPRVK---------------------------- 243

Query: 249 LSGLFPRSQSTGH--------YERFTLRLPEEVRSELV-NSNLNRARSCVALPRMQSSRQ 308
               FPRS +TGH         +RFTLR+PEE+R +++ N  LNR+ S   LPR  SSR 
Sbjct: 244 ----FPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRS 290

Query: 309 GYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGT 341
           G + +         RSR++S R   R   P+  +  R+DG+
Sbjct: 304 GKQVD---------RSRAKSDRWLFRKT-PSFLWRNRDDGS 290

BLAST of MS001114 vs. ExPASy Swiss-Prot
Match: Q9M0R5 (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.9e-42
Identity = 138/333 (41.44%), Postives = 181/333 (54.35%), Query Frame = 0

Query: 48  RQTISKRMAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARG 107
           RQT     +I+ IV++  FI L ++S     C   R    +  +G  V ++    RA RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC-CLHCIFYR--EEIGAAGQDVLHS----RARRG 101

Query: 108 LDAAVIATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAW 167
           L+  VI +FPTF+YS VKG+KIGKG +ECA+CLSEFED++TLR +P CSH FHA+CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 168 LVSHSTCPVCRASLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQNQ 227
           L S STCPVCRA+L  KPG+ S+  L               N DV  G  ++  N+    
Sbjct: 162 LSSWSTCPVCRANLSLKPGE-SYPYL---------------NMDVETGGVQKLPNE---- 221

Query: 228 NRGLLSPNQNVPLRSRSSG----WRLSGLF-PRSQSTGH---------YERFTLRLPEEV 287
            R L     +V  RSRS+G    WR++ +F PRS STGH          +RFTL+LPEEV
Sbjct: 222 -RSL--TGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPEEV 281

Query: 288 RSELVNSNLNRARSCVALPRMQSSRQGYR-GENGKSLFVSSRSRSRSGRSERRTL---FP 347
           + +LV+ NL R RS + LP+  SSRQGYR G  G      S+ R    R+   +    F 
Sbjct: 282 QRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQGRQTHRRALSMSFSFSFQ 341

Query: 348 TTAFFRREDGTENGDA-----GGRPFNRLRDAE 358
           T +     D  +   A     G R F RL   E
Sbjct: 342 TASVRSIHDMNDQAQAKDKYFGERSFERLMPEE 343

BLAST of MS001114 vs. ExPASy TrEMBL
Match: A0A6J1BPI5 (RING-H2 finger protein ATL11-like OS=Momordica charantia OX=3673 GN=LOC111004653 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 3.9e-199
Identity = 364/371 (98.11%), Postives = 365/371 (98.38%), Query Frame = 0

Query: 1   ALKLRLCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGL-PSPPDMYPFRQTISKRMAIVL 60
           ALKLRLCFLNHVVTWSLINFFL V+MSSLVAAQDPGG  PSPPDMYPFRQTISKRMAIVL
Sbjct: 2   ALKLRLCFLNHVVTWSLINFFLPVNMSSLVAAQDPGGTPPSPPDMYPFRQTISKRMAIVL 61

Query: 61  IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF 120
           IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF
Sbjct: 62  IVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTF 121

Query: 121 VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA 180
           VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA
Sbjct: 122 VYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRA 181

Query: 181 SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRN--QDQNQNRGLLSPNQN 240
           SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRN  QDQNQNRGLLSPNQN
Sbjct: 182 SLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQDQNQNRGLLSPNQN 241

Query: 241 VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS 300
           VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS
Sbjct: 242 VPLRSRSSGWRLSGLFPRSQSTGHYERFTLRLPEEVRSELVNSNLNRARSCVALPRMQSS 301

Query: 301 RQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE 360
           RQGYRGENGKSLFVSSRSRSRSG SERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE
Sbjct: 302 RQGYRGENGKSLFVSSRSRSRSGGSERRTLFPTTAFFRREDGTENGDAGGRPFNRLRDAE 361

Query: 361 AEADGDGQSQR 369
           AEADGDGQSQR
Sbjct: 362 AEADGDGQSQR 372

BLAST of MS001114 vs. ExPASy TrEMBL
Match: A0A5A7VH05 (RING-H2 finger protein ATL11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004600 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 7.6e-126
Identity = 265/383 (69.19%), Postives = 295/383 (77.02%), Query Frame = 0

Query: 6   LCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCF 65
           L FLNHV       +F+L+   SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCF
Sbjct: 6   LFFLNHVFV-----YFILLSHVSLAAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCF 65

Query: 66  FIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVK 125
           FIV+AVLSVYTRQCT+QRFGGRL+L       N+RSRRAARGLDAAVIATFPTFVYSNVK
Sbjct: 66  FIVVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVK 125

Query: 126 GVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKP 185
            +KIGKGSLECA+CLSEF D+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKP
Sbjct: 126 DLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKP 185

Query: 186 GDVSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPN 245
           GD+SFAALLNS+S       +EGNR  G+ N  VI+ IPEEN+ QD N    N+GL   N
Sbjct: 186 GDISFAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGL---N 245

Query: 246 QNVPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARS 305
           Q+  +RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARS
Sbjct: 246 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARS 305

Query: 306 CVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE--NGDA 365
           CVA  RMQSSRQGYR E GK+  V   +RSRSGRSE RTL P    F+RE   +  NGD 
Sbjct: 306 CVAFQRMQSSRQGYRNELGKNGLVG--NRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDD 365

Query: 366 GGRPFNRLRDAEAEADGDGQSQR 369
           GGRPF RLR     AD DGQSQ+
Sbjct: 366 GGRPFARLR-----ADCDGQSQQ 369

BLAST of MS001114 vs. ExPASy TrEMBL
Match: A0A1S3BBD9 (RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 7.6e-126
Identity = 265/383 (69.19%), Postives = 295/383 (77.02%), Query Frame = 0

Query: 6   LCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCF 65
           L FLNHV       +F+L+   SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCF
Sbjct: 6   LFFLNHVFV-----YFILLSHVSLAAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCF 65

Query: 66  FIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVK 125
           FIV+AVLSVYTRQCT+QRFGGRL+L       N+RSRRAARGLDAAVIATFPTFVYSNVK
Sbjct: 66  FIVVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVK 125

Query: 126 GVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKP 185
            +KIGKGSLECA+CLSEF D+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKP
Sbjct: 126 DLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKP 185

Query: 186 GDVSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPN 245
           GD+SFAALLNS+S       +EGNR  G+ N  VI+ IPEEN+ QD N    N+GL   N
Sbjct: 186 GDISFAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGL---N 245

Query: 246 QNVPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARS 305
           Q+  +RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARS
Sbjct: 246 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARS 305

Query: 306 CVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE--NGDA 365
           CVA  RMQSSRQGYR E GK+  V   +RSRSGRSE RTL P    F+RE   +  NGD 
Sbjct: 306 CVAFQRMQSSRQGYRNELGKNGLVG--NRSRSGRSEWRTLLPGAPLFKREGSRKDVNGDD 365

Query: 366 GGRPFNRLRDAEAEADGDGQSQR 369
           GGRPF RLR     AD DGQSQ+
Sbjct: 366 GGRPFARLR-----ADCDGQSQQ 369

BLAST of MS001114 vs. ExPASy TrEMBL
Match: A0A0A0LNW5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.7e-125
Identity = 262/383 (68.41%), Postives = 293/383 (76.50%), Query Frame = 0

Query: 6   LCFLNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCF 65
           L F+NHV       +F+L+   SL AAQ      +PPDMYPF+QTISKRMA+VLIVLVCF
Sbjct: 6   LFFVNHVFI-----YFILLSHVSLTAAQS----GAPPDMYPFKQTISKRMAVVLIVLVCF 65

Query: 66  FIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVK 125
           FIV+AVLSVYTRQCT+QRFGGRL+L  P    N+RSRRAARGLDAAVIATFPTFVYSNVK
Sbjct: 66  FIVVAVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYSNVK 125

Query: 126 GVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKP 185
            +KIGKGSLECA+CLSEF D+DTLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKP
Sbjct: 126 DLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKP 185

Query: 186 GDVSFAALLNSES-------NEGNRVGGSGNGDVILGIPEENRNQDQN---QNRGLLSPN 245
           GD+SFAALLNS+S       +EGNR  GS N  V++ IPEEN+ QD N    N+GL   N
Sbjct: 186 GDISFAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGL---N 245

Query: 246 QNVPLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARS 305
           Q+  +RSRSSGWRLSGLFPRS STGH        YER+TLRLPEEVRSEL+NSNLNRARS
Sbjct: 246 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARS 305

Query: 306 CVALPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE--NGDA 365
           CVA  RMQSSRQGYR E GK+  V   +RSRSGR E RTL       +RE   +  NGD 
Sbjct: 306 CVAFQRMQSSRQGYRNELGKNGSVG--NRSRSGRPEWRTLLAAAPLLKREGSRKGVNGDE 365

Query: 366 GGRPFNRLRDAEAEADGDGQSQR 369
           GGRPF RLR      DGDGQSQ+
Sbjct: 366 GGRPFARLR-----PDGDGQSQQ 369

BLAST of MS001114 vs. ExPASy TrEMBL
Match: A0A6J1KAR8 (RING-H2 finger protein ATL34-like OS=Cucurbita maxima OX=3661 GN=LOC111492163 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.4e-124
Identity = 264/384 (68.75%), Postives = 293/384 (76.30%), Query Frame = 0

Query: 4   LRLCFLNHVVTWSLINFFLLVDMSSLVAAQDPG-GLPSPPDMYPFRQTISKRMAIVLIVL 63
           LR C   HV+T  LI+  LL  + SL AAQ  G  +PSPP+MY F+QTISKRMA+VLIVL
Sbjct: 6   LRRC---HVLTGFLIHSILLSHI-SLAAAQSGGPAVPSPPEMYSFKQTISKRMAVVLIVL 65

Query: 64  VCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYS 123
           VCFFIVLA+LSVYTRQC DQRFGG L+L       N R RRAARGLDAAVIA+FPTFVYS
Sbjct: 66  VCFFIVLALLSVYTRQCNDQRFGGHLLLPTAAEGINGRPRRAARGLDAAVIASFPTFVYS 125

Query: 124 NVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 183
           NVKG+KIGKG+LECAVCLSEFED++TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLV
Sbjct: 126 NVKGLKIGKGALECAVCLSEFEDDNTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV 185

Query: 184 PKPGDVSFAALLNSES----NEGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNV 243
           PKPGD+SFAALL+S+S    ++GNRV G  N  V + IPE N      QN+GL   NQN 
Sbjct: 186 PKPGDISFAALLDSDSRIHGDDGNRVAGLENCQVGIRIPEGN-----PQNQGL---NQNG 245

Query: 244 PLRSRSSGWRLSGLFPRSQSTGH--------YERFTLRLPEEVRSELVNSNLNRARSCVA 303
           P+RSRS+GWRL GLFPRS STGH        YERFTLRLP EVRSEL+NSNLNRARSCVA
Sbjct: 246 PIRSRSTGWRLIGLFPRSHSTGHSLVQIGADYERFTLRLPTEVRSELLNSNLNRARSCVA 305

Query: 304 LPRMQSSRQGYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGTE------NGD 363
           LPR+QSSRQGYR E GK+ FV   +RSRSGRSE  T FP T  FRRE          NGD
Sbjct: 306 LPRVQSSRQGYRSELGKNGFVG--NRSRSGRSEWWTFFPATPLFRREGSRNDANVNVNGD 365

Query: 364 AGGRPFNRLRDAEAEADGDGQSQR 369
            GGRPF RLRD     DG GQSQ+
Sbjct: 366 GGGRPFVRLRD-----DGHGQSQQ 370

BLAST of MS001114 vs. TAIR 10
Match: AT1G72200.1 (RING/U-box superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-54
Identity = 133/306 (43.46%), Postives = 186/306 (60.78%), Query Frame = 0

Query: 55  MAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNN--SRSRRAARGLDAAV 114
           MAI++IVLV  F  L   SVY R+C ++  G  +    P    N  + +R+ ARGLDA++
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 115 IATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHS 174
           I TFPTF YS VK ++IGK +LEC+VCL+EFED++TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 175 TCPVCRASLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVI--LGIPEENRNQDQNQNRG 234
           TCP+CRA L+P PG+   +  +    N+    G   NGD I  LG P+    +       
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVND--PPGSDPNGDRIRSLGSPDARLIESV----- 242

Query: 235 LLSPNQNVPLRSRSSGWRLSGLFPRSQSTGHY----ERFTLRLPEEVRSELVNSNLNRAR 294
            L+ NQ++P RS S+GW L+G+F  S  TG +    +RFTLRLP+++ ++LVN NL++  
Sbjct: 243 ALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQHSENLDRFTLRLPQDIHNKLVNPNLSKVH 302

Query: 295 SCVALPRMQSSRQGYR-GENG--KSLFVSSRSRSRSGRSERRTL-----FPTTAFFRRED 345
             VALP++ SS +GYR G  G  ++ F   R   + GR +RR       + T++      
Sbjct: 303 --VALPQVMSSTRGYRTGSLGSERNYFYYERF-DQDGRLDRRPFSITPPYRTSSINHMSP 356

BLAST of MS001114 vs. TAIR 10
Match: AT1G22500.1 (RING/U-box superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 4.8e-48
Identity = 127/302 (42.05%), Postives = 176/302 (58.28%), Query Frame = 0

Query: 48  RQTISKRMAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAAR- 107
           R + S   AI++IVLV  F  L  +SVY R+C     G   + SG G  N    R+    
Sbjct: 32  RTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALG---MDSGGGPGNWLNVRQTTEP 91

Query: 108 GLDAAVIATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDA 167
           GLDA+VI TFPTF YS VK ++IGK +LEC VCL+EFED++TLRL+P+C HVFH  CIDA
Sbjct: 92  GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDA 151

Query: 168 WLVSHSTCPVCRASLVPKPGD---VSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQ 227
           WL S +TCP+CRA+LVP PG+        L         R     N   +L  P+E R  
Sbjct: 152 WLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLRTPIDDNRKRVLTSPDE-RLI 211

Query: 228 DQNQNRGLLSPNQNVPLRSRSSGWRLSGLFPRSQSTG----HYERFTLRLPEEVRSELVN 287
           D     G    NQ++P +S S+GW+L+ L+  + S G    + +R+TLRLP+E+  +LVN
Sbjct: 212 DSVAWTG----NQSMPRKSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVN 271

Query: 288 SNLNR--ARSCVALPRMQSSRQGYR-GENG--KSLFVSSRSRSRSGRSERRTLFPTTAFF 337
           S+L +  ++  +ALP+ +SS +G+R G  G  K+ F   R   + GR +RR    T  + 
Sbjct: 272 SSLGKQGSKGQLALPQERSSVRGFRTGSLGTEKNYFYFERF-DQDGRLDRRPFSITPPYH 324

BLAST of MS001114 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-44
Identity = 127/333 (38.14%), Postives = 179/333 (53.75%), Query Frame = 0

Query: 18  INFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFIVLAVLSVYTR 77
           I F L++  + L A+Q   G  + P  Y     +S  MA+++++L+     +   S+Y R
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNY---GRLSPAMAVIVVILIAALFFMGFFSIYFR 74

Query: 78  QCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGVKIGKGSLECA 137
            C+     G  V    G ++ +    AARGLD +V+ TFPTF+YS+VK  K+GKG LECA
Sbjct: 75  HCSGVPDAG--VSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECA 134

Query: 138 VCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALLNSE 197
           +CL+EFED++TLRLLPKC HVFH  CIDAWL +H TCPVCRA+L  +  +        +E
Sbjct: 135 ICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTE 194

Query: 198 SN-EGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNVPLRSRSSGWRLSGLFPRS 257
            + E  +V  +    V   +PE+    + +  R    P   V L+           F RS
Sbjct: 195 PDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRR---LPGVPVDLKRVK--------FSRS 254

Query: 258 QSTGH--------YERFTLRLPEEVRSELVNS-NLNRARSCVALPRMQSSRQGYRGENGK 317
            +TGH         ERFTLRLPE+VR  ++    LNR  S + LPR  SSR+      GK
Sbjct: 255 HTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRR------GK 314

Query: 318 SLFVSSRSRSRSGRSERRTLFPTTAFFRREDGT 341
            +    RSR+RS R   R   P+  +  R+DG+
Sbjct: 315 PI---DRSRARSDRWLFRKT-PSFLWRSRDDGS 321

BLAST of MS001114 vs. TAIR 10
Match: AT4G09120.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-43
Identity = 138/333 (41.44%), Postives = 181/333 (54.35%), Query Frame = 0

Query: 48  RQTISKRMAIVLIVLVCFFIVLAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARG 107
           RQT     +I+ IV++  FI L ++S     C   R    +  +G  V ++    RA RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC-CLHCIFYR--EEIGAAGQDVLHS----RARRG 101

Query: 108 LDAAVIATFPTFVYSNVKGVKIGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAW 167
           L+  VI +FPTF+YS VKG+KIGKG +ECA+CLSEFED++TLR +P CSH FHA+CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 168 LVSHSTCPVCRASLVPKPGDVSFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQNQ 227
           L S STCPVCRA+L  KPG+ S+  L               N DV  G  ++  N+    
Sbjct: 162 LSSWSTCPVCRANLSLKPGE-SYPYL---------------NMDVETGGVQKLPNE---- 221

Query: 228 NRGLLSPNQNVPLRSRSSG----WRLSGLF-PRSQSTGH---------YERFTLRLPEEV 287
            R L     +V  RSRS+G    WR++ +F PRS STGH          +RFTL+LPEEV
Sbjct: 222 -RSL--TGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPEEV 281

Query: 288 RSELVNSNLNRARSCVALPRMQSSRQGYR-GENGKSLFVSSRSRSRSGRSERRTL---FP 347
           + +LV+ NL R RS + LP+  SSRQGYR G  G      S+ R    R+   +    F 
Sbjct: 282 QRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQGRQTHRRALSMSFSFSFQ 341

Query: 348 TTAFFRREDGTENGDA-----GGRPFNRLRDAE 358
           T +     D  +   A     G R F RL   E
Sbjct: 342 TASVRSIHDMNDQAQAKDKYFGERSFERLMPEE 343

BLAST of MS001114 vs. TAIR 10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1 )

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-43
Identity = 122/341 (35.78%), Postives = 169/341 (49.56%), Query Frame = 0

Query: 9   LNHVVTWSLINFFLLVDMSSLVAAQDPGGLPSPPDMYPFRQTISKRMAIVLIVLVCFFIV 68
           + H+    L+ F LL      V+A  PG      D Y +  ++S  MA+V++V++     
Sbjct: 4   IKHISLPVLVLFLLL-----SVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFF 63

Query: 69  LAVLSVYTRQCTDQRFGGRLVLSGPGVQNNSRSRRAARGLDAAVIATFPTFVYSNVKGVK 128
           +   +VY R CT    G   V    G +    +   ARGLDA  I TFPTFVYS VK  K
Sbjct: 64  MGFFTVYIRHCTGAVDGS--VTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQK 123

Query: 129 IGKGSLECAVCLSEFEDEDTLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDV 188
           IGKG+LECA+CL+EFED++TLRLLPKC HVFH  CI AWL  H TCPVCR +L  +  + 
Sbjct: 124 IGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEP 183

Query: 189 SFAALLNSESNEGNRVGGSGNGDVILGIPEENRNQDQNQNRGLLSPNQNVPLRSRSSGWR 248
                 + E+ + + V        ++ +P                               
Sbjct: 184 EVVVETDLEAQQQSAVPVP-----VVELPRVK---------------------------- 243

Query: 249 LSGLFPRSQSTGH--------YERFTLRLPEEVRSELV-NSNLNRARSCVALPRMQSSRQ 308
               FPRS +TGH         +RFTLR+PEE+R +++ N  LNR+ S   LPR  SSR 
Sbjct: 244 ----FPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRS 290

Query: 309 GYRGENGKSLFVSSRSRSRSGRSERRTLFPTTAFFRREDGT 341
           G + +         RSR++S R   R   P+  +  R+DG+
Sbjct: 304 GKQVD---------RSRAKSDRWLFRKT-PSFLWRNRDDGS 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131441.18.1e-19998.11RING-H2 finger protein ATL11-like [Momordica charantia][more]
XP_038884270.13.0e-12971.47RING-H2 finger protein ATL11-like [Benincasa hispida][more]
XP_008444873.11.6e-12569.19PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo] >KAA0065125.1 RING-H... [more]
XP_004152750.13.5e-12568.41RING-H2 finger protein ATL11 [Cucumis sativus] >KGN62719.1 hypothetical protein ... [more]
XP_022997189.15.0e-12468.75RING-H2 finger protein ATL34-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q84W403.7e-5343.46RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2[more]
Q9SK926.7e-4742.05E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ... [more]
Q8RXX91.6e-4338.14E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
Q8LGA52.9e-4235.78E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ... [more]
Q9M0R52.9e-4241.44Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 P... [more]
Match NameE-valueIdentityDescription
A0A6J1BPI53.9e-19998.11RING-H2 finger protein ATL11-like OS=Momordica charantia OX=3673 GN=LOC111004653... [more]
A0A5A7VH057.6e-12669.19RING-H2 finger protein ATL11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A1S3BBD97.6e-12669.19RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 S... [more]
A0A0A0LNW51.7e-12568.41RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 P... [more]
A0A6J1KAR82.4e-12468.75RING-H2 finger protein ATL34-like OS=Cucurbita maxima OX=3661 GN=LOC111492163 PE... [more]
Match NameE-valueIdentityDescription
AT1G72200.12.6e-5443.46RING/U-box superfamily protein [more]
AT1G22500.14.8e-4842.05RING/U-box superfamily protein [more]
AT3G05200.11.1e-4438.14RING/U-box superfamily protein [more]
AT4G09120.12.1e-4341.44RING/U-box superfamily protein [more]
AT5G27420.12.1e-4335.78carbon/nitrogen insensitive 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 136..177
e-value: 2.1E-7
score: 40.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 135..178
e-value: 8.1E-15
score: 54.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 136..178
score: 12.917115
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 94..183
e-value: 3.6E-22
score: 79.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..362
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..368
NoneNo IPR availablePANTHERPTHR14155:SF583RING-H2 FINGER PROTEIN ATL11coord: 15..295
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 15..295
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 135..178
e-value: 8.68926E-22
score: 85.0461
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 132..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001114.1MS001114.1mRNA