MS001110 (gene) Bitter gourd (TR) v1

Overview
NameMS001110
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSpindle pole body component 110
Locationscaffold36: 1509433 .. 1510860 (-)
RNA-Seq ExpressionMS001110
SyntenyMS001110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAACATTCCCCAAGAAATCGACGATTACATCAAAGAATCAATCTACCATTCTCTCGGCCTTCCCGTCTCCAAACACACACTGGAATTGAAACTCGTCGCCTCCGAAGCGGCACAGCAACACCTTCGCGTTCAATGCCTCTCCTTGCAATCTAAATTAAACCACCAAATCCTCGCAGCCCAAAGTTCCAAGGTTTTTAATCTTTTCTTTTCAATTTCTTGACACCATTAATTGGCATTGCCAATAATAATGTCGTTTTTTAGGCGGAGGCCAAGTTGAGTGCGCAGGCGTTGAAGAAGGCAATTGAGAAAAACGGAGACCTCTCAGAGGAGAATTCGGCTCTGACTCTGCAATGCAAGAAACTGAAAGCCTTTGCCAACAAATTGAAGATGGCCGTCGATCGCGCCAACGAAGAAACGGCTCGTGTGCGTGAATTGGAACAGGAGATGAACGAATTAACGGACGATTTGTATTTCTTCCAGAATCAATACCAAACGCGAAAGGTAAAAATCAATCAACCAAATTGTTCTCCAATTTCGGCCTCCGTAATGTGTGTGATTTCTTGCAGTTTCATTCATCTTCCATGGAGGAGGATTTGGTTGACTCTGTTTTGGCCGCTTTTATTGGGGAAACAGAGGTTCCTGCTGCAGAGTTCTTGTTACACAACGCAGGCTACAGTTCGTGTCGAAGATTGCTCTACTTGTCCAACAGGTAATTACAAACTAAAAATCGCTACTCTTTTCGGATTTAATTATTAATTCTTGATCTTCTTTCTCAAGCCCTTGCGATGGAATTGAAAATCAAGATTAATCATTTACTGTAGCTTAAGCCCTGCAACTCAGAAAGCTCTGTCTCTGGCTGCTAAAATTAAGGAACTTGAGAAAAACAAGGAAGAACTTCAGCTCCTCCTCCGTACAGCTCAAGAAGAGGTCAGATTTCTTTCAGCACAATCTTGTCAACCAAAAGAAATTTATGAACATTAAAAAAGATCATTAATTAACTCTACTCTTTATAATCAATAAATGTTCAAAAACGGACTCATAATGATATATGAAATAATAATATTTTTAACTGGCGATTGGAAATTCTCACGAGACCTAATAAGTGTAGTGTAAATGAATATAAATTGAGAGGAAATGAAGAATACAATACAGAACCTACTCCTCTAATGTCATATTAAACACCATTAATCAACCCAAAAATTTAAAATTTAATTCAATTTACATATAAACTTCTGAACAATAGTATTTATCTTTCTTTTTTCTTAATTTTTTTAAGGTAAAATTCTTAAACGAACAAATCGATTATCTGATGGAAGATCAAACGTCGACGTCCCATGAAGAAGGAAGCCAACGACGTTGTGGAGGGAAACCACCAGCCAGTAGTGACTATGCCTCTGTGAAGGTTAAGAAAAATAAATACACAAAC

mRNA sequence

AGTAACATTCCCCAAGAAATCGACGATTACATCAAAGAATCAATCTACCATTCTCTCGGCCTTCCCGTCTCCAAACACACACTGGAATTGAAACTCGTCGCCTCCGAAGCGGCACAGCAACACCTTCGCGTTCAATGCCTCTCCTTGCAATCTAAATTAAACCACCAAATCCTCGCAGCCCAAAGTTCCAAGGCGGAGGCCAAGTTGAGTGCGCAGGCGTTGAAGAAGGCAATTGAGAAAAACGGAGACCTCTCAGAGGAGAATTCGGCTCTGACTCTGCAATGCAAGAAACTGAAAGCCTTTGCCAACAAATTGAAGATGGCCGTCGATCGCGCCAACGAAGAAACGGCTCGTGTGCGTGAATTGGAACAGGAGATGAACGAATTAACGGACGATTTGTATTTCTTCCAGAATCAATACCAAACGCGAAAGTTTCATTCATCTTCCATGGAGGAGGATTTGGTTGACTCTGTTTTGGCCGCTTTTATTGGGGAAACAGAGGTTCCTGCTGCAGAGTTCTTGTTACACAACGCAGGCTACAGTTCGTGTCGAAGATTGCTCTACTTGTCCAACAGCTTAAGCCCTGCAACTCAGAAAGCTCTGTCTCTGGCTGCTAAAATTAAGGAACTTGAGAAAAACAAGGAAGAACTTCAGCTCCTCCTCCGTACAGCTCAAGAAGAGGTAAAATTCTTAAACGAACAAATCGATTATCTGATGGAAGATCAAACGTCGACGTCCCATGAAGAAGGAAGCCAACGACGTTGTGGAGGGAAACCACCAGCCAGTAGTGACTATGCCTCTGTGAAGGTTAAGAAAAATAAATACACAAAC

Coding sequence (CDS)

AGTAACATTCCCCAAGAAATCGACGATTACATCAAAGAATCAATCTACCATTCTCTCGGCCTTCCCGTCTCCAAACACACACTGGAATTGAAACTCGTCGCCTCCGAAGCGGCACAGCAACACCTTCGCGTTCAATGCCTCTCCTTGCAATCTAAATTAAACCACCAAATCCTCGCAGCCCAAAGTTCCAAGGCGGAGGCCAAGTTGAGTGCGCAGGCGTTGAAGAAGGCAATTGAGAAAAACGGAGACCTCTCAGAGGAGAATTCGGCTCTGACTCTGCAATGCAAGAAACTGAAAGCCTTTGCCAACAAATTGAAGATGGCCGTCGATCGCGCCAACGAAGAAACGGCTCGTGTGCGTGAATTGGAACAGGAGATGAACGAATTAACGGACGATTTGTATTTCTTCCAGAATCAATACCAAACGCGAAAGTTTCATTCATCTTCCATGGAGGAGGATTTGGTTGACTCTGTTTTGGCCGCTTTTATTGGGGAAACAGAGGTTCCTGCTGCAGAGTTCTTGTTACACAACGCAGGCTACAGTTCGTGTCGAAGATTGCTCTACTTGTCCAACAGCTTAAGCCCTGCAACTCAGAAAGCTCTGTCTCTGGCTGCTAAAATTAAGGAACTTGAGAAAAACAAGGAAGAACTTCAGCTCCTCCTCCGTACAGCTCAAGAAGAGGTAAAATTCTTAAACGAACAAATCGATTATCTGATGGAAGATCAAACGTCGACGTCCCATGAAGAAGGAAGCCAACGACGTTGTGGAGGGAAACCACCAGCCAGTAGTGACTATGCCTCTGTGAAGGTTAAGAAAAATAAATACACAAAC

Protein sequence

SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEVPAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLMEDQTSTSHEEGSQRRCGGKPPASSDYASVKVKKNKYTN
Homology
BLAST of MS001110 vs. NCBI nr
Match: XP_022131622.1 (uncharacterized protein LOC111004753 [Momordica charantia])

HSP 1 Score: 498.4 bits (1282), Expect = 3.9e-137
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0

Query: 1   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 60
           SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA
Sbjct: 2   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 61

Query: 61  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR 120
           QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR
Sbjct: 62  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR 121

Query: 121 ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEVPAAEFLLHNAGY 180
           ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETE PAAEFLLHNAGY
Sbjct: 122 ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEAPAAEFLLHNAGY 181

Query: 181 SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME 240
           SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME
Sbjct: 182 SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME 241

Query: 241 DQTSTSHEEGSQRRCGGKPPASSDYASVKV 271
           DQTSTSHEEGSQRRCGGKPPASSDYASVK+
Sbjct: 242 DQTSTSHEEGSQRRCGGKPPASSDYASVKL 271

BLAST of MS001110 vs. NCBI nr
Match: KAG6585310.1 (hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-58
Identity = 146/274 (53.28%), Postives = 192/274 (70.07%), Query Frame = 0

Query: 3   IPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQS 62
           IPQE+D YIKESI H+LGLPVS  TL LKL ASEA Q+ L  QCLSLQSKLN  I + ++
Sbjct: 2   IPQEMDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKA 61

Query: 63  SKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVREL 122
           ++AEA +SAQ LKKAIE+N  LS+ENS L  Q K++K  A++ KMA+  A E   R R+L
Sbjct: 62  AQAEAMMSAQGLKKAIERNERLSKENSRLEDQLKRMKVIASRGKMAIHGAKEAEDRARKL 121

Query: 123 EQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFI-GETEVPAAEFLLHNAGYS 182
             E  +LT+DL FF+ QYQ RKF  +SMEE LV++ L   + G+T +   +FL+ N    
Sbjct: 122 NDEATKLTEDLNFFKEQYQMRKFSFASMEEVLVETTLNDLVPGDTGLTVGQFLVANMNND 181

Query: 183 SCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLMED 242
           SCRRLL+LS SL P+TQ+ALSLAA+IK LE+N  +LQ+ L  AQ EV  L+++I  L+ED
Sbjct: 182 SCRRLLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLED 241

Query: 243 QTSTSHEEGSQRRCGGKPPASSDYASVKVKKNKY 276
           +  +S +    R    KPPASS  +SVKV+KN++
Sbjct: 242 KEDSSPDPDFAR----KPPASS--SSVKVEKNEW 269

BLAST of MS001110 vs. NCBI nr
Match: KAG7020228.1 (hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-55
Identity = 142/270 (52.59%), Postives = 187/270 (69.26%), Query Frame = 0

Query: 7   IDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQSSKAE 66
           +D YIKESI H+LGLPVS  TL LKL ASEA Q+ L  QCLSLQSKLN  I + ++++AE
Sbjct: 1   MDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAE 60

Query: 67  AKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVRELEQEM 126
           A +SAQ LKKAIE+N  LS+ENS L  Q K++K  A++ KMA+  A E   R R+L  E 
Sbjct: 61  AMMSAQGLKKAIERNERLSKENSRLEDQLKRMKVIASRGKMAIHGAKEAEDRARKLNDEA 120

Query: 127 NELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFI-GETEVPAAEFLLHNAGYSSCRR 186
            +LT+DL FF+ QYQ RKF  +SMEE LV++ L   + G+T     +FL+ N    SCRR
Sbjct: 121 TKLTEDLNFFKEQYQMRKFSFASMEEVLVETALNDLVPGDTGSTVGQFLVANMNNDSCRR 180

Query: 187 LLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLMEDQTST 246
           LL+LS SL P+TQ+ALSLAA+IK LE+N  +LQ+ L  AQ EV  L+++I  L+ED+  +
Sbjct: 181 LLHLSQSLRPSTQRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDS 240

Query: 247 SHEEGSQRRCGGKPPASSDYASVKVKKNKY 276
           S +    R    KPPASS  +SVKV+KN++
Sbjct: 241 SPDPDFAR----KPPASS--SSVKVEKNEW 264

BLAST of MS001110 vs. NCBI nr
Match: XP_038885825.1 (uncharacterized protein LOC120076121 [Benincasa hispida])

HSP 1 Score: 194.9 bits (494), Expect = 9.2e-46
Identity = 118/207 (57.00%), Postives = 146/207 (70.53%), Query Frame = 0

Query: 66  EAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVRELEQE 125
           EAKL+AQ LKKAIEKN  LSEENS L  QCKK+KAF N+ K+A+DRA E   RV ELE E
Sbjct: 31  EAKLNAQGLKKAIEKNQQLSEENSRLVEQCKKMKAFMNRGKLALDRAKETQVRVHELEDE 90

Query: 126 MNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEVPAAEFLLHNAGYSSCRR 185
           + EL  DL FF++Q+Q  KF  +SMEE LV+S L+  IGE E  A+EFLL N    SCRR
Sbjct: 91  VEELKLDLKFFKDQHQMNKFQFTSMEEILVESALSQLIGEAESSASEFLLANIENDSCRR 150

Query: 186 LLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLMEDQTST 245
           LL+LS SL P +++ L+LAAKIK LEK+ E+LQLLL TAQ E K L++QI YL+E+QT++
Sbjct: 151 LLHLSRSLGPLSRRTLALAAKIKSLEKDNEQLQLLLCTAQGEAKLLSDQIGYLLEEQTTS 210

Query: 246 SHEEGSQRRCGGKPPASSDYASVKVKK 273
              +G      GKPPA S    V  +K
Sbjct: 211 ---DGGNGGGIGKPPAGSSSPKVHERK 234

BLAST of MS001110 vs. NCBI nr
Match: EXB86655.1 (28 kDa ribonucleoprotein [Morus notabilis])

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-40
Identity = 128/294 (43.54%), Postives = 178/294 (60.54%), Query Frame = 0

Query: 3   IPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQS 62
           +PQEIDDYIKESI H+LGLPVS+ TLELKL ASE AQ  LR QCL L S+L  +  A + 
Sbjct: 3   LPQEIDDYIKESIQHTLGLPVSRSTLELKLQASEEAQSRLRDQCLLLHSRLKEKDQAIER 62

Query: 63  SKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLK----AFANKLKMAVD-------R 122
           ++AE+ +SA ALKK +E+N  L+ E + L  QC KL+     + N  +  +D       R
Sbjct: 63  ARAESSMSALALKKFVEENQKLASECAHLLNQCNKLEKECSLYDNDREALMDFGNEADQR 122

Query: 123 ANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSS----SMEEDLVDSVLAAFI-GET 182
           A E   RV+ELE+E+  L+D+L F++ Q +     SS    + ++ L++SVLA  I G+ 
Sbjct: 123 AKEAELRVQELEEEVRGLSDELQFYKRQCEACMVDSSLQGVTTQDSLLESVLATLISGDD 182

Query: 183 EVPAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQE 242
            VP   FL  N+ + SC RLL + N L P+TQK LSLAA+ K LEK+KE L+  L  A+E
Sbjct: 183 AVPGHAFLEANSSHESCLRLLEMWNFLKPSTQKVLSLAAEFKALEKDKEHLRTNLYRAEE 242

Query: 243 EVKFLNEQIDYLMEDQTS---TSHEEGSQRRCGGKPPASSDYASVKVKKNKYTN 278
           EVK L E+ + L E+        ++E +Q    GK  +S+   S K K +  T+
Sbjct: 243 EVKLLFEENNMLDEENKKLLMKFNKERNQHGSSGKHASSAPAKSNKRKSSSKTS 296

BLAST of MS001110 vs. ExPASy TrEMBL
Match: A0A6J1BRI9 (uncharacterized protein LOC111004753 OS=Momordica charantia OX=3673 GN=LOC111004753 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 1.9e-137
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0

Query: 1   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 60
           SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA
Sbjct: 2   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 61

Query: 61  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR 120
           QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR
Sbjct: 62  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLKAFANKLKMAVDRANEETARVR 121

Query: 121 ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEVPAAEFLLHNAGY 180
           ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETE PAAEFLLHNAGY
Sbjct: 122 ELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETEAPAAEFLLHNAGY 181

Query: 181 SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME 240
           SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME
Sbjct: 182 SSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQEEVKFLNEQIDYLME 241

Query: 241 DQTSTSHEEGSQRRCGGKPPASSDYASVKV 271
           DQTSTSHEEGSQRRCGGKPPASSDYASVK+
Sbjct: 242 DQTSTSHEEGSQRRCGGKPPASSDYASVKL 271

BLAST of MS001110 vs. ExPASy TrEMBL
Match: W9REI7 (28 kDa ribonucleoprotein OS=Morus notabilis OX=981085 GN=L484_013185 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 128/294 (43.54%), Postives = 178/294 (60.54%), Query Frame = 0

Query: 3   IPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQS 62
           +PQEIDDYIKESI H+LGLPVS+ TLELKL ASE AQ  LR QCL L S+L  +  A + 
Sbjct: 3   LPQEIDDYIKESIQHTLGLPVSRSTLELKLQASEEAQSRLRDQCLLLHSRLKEKDQAIER 62

Query: 63  SKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLK----AFANKLKMAVD-------R 122
           ++AE+ +SA ALKK +E+N  L+ E + L  QC KL+     + N  +  +D       R
Sbjct: 63  ARAESSMSALALKKFVEENQKLASECAHLLNQCNKLEKECSLYDNDREALMDFGNEADQR 122

Query: 123 ANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSS----SMEEDLVDSVLAAFI-GET 182
           A E   RV+ELE+E+  L+D+L F++ Q +     SS    + ++ L++SVLA  I G+ 
Sbjct: 123 AKEAELRVQELEEEVRGLSDELQFYKRQCEACMVDSSLQGVTTQDSLLESVLATLISGDD 182

Query: 183 EVPAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTAQE 242
            VP   FL  N+ + SC RLL + N L P+TQK LSLAA+ K LEK+KE L+  L  A+E
Sbjct: 183 AVPGHAFLEANSSHESCLRLLEMWNFLKPSTQKVLSLAAEFKALEKDKEHLRTNLYRAEE 242

Query: 243 EVKFLNEQIDYLMEDQTS---TSHEEGSQRRCGGKPPASSDYASVKVKKNKYTN 278
           EVK L E+ + L E+        ++E +Q    GK  +S+   S K K +  T+
Sbjct: 243 EVKLLFEENNMLDEENKKLLMKFNKERNQHGSSGKHASSAPAKSNKRKSSSKTS 296

BLAST of MS001110 vs. ExPASy TrEMBL
Match: A0A5N6RMD9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017898 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.1e-40
Identity = 125/292 (42.81%), Postives = 171/292 (58.56%), Query Frame = 0

Query: 2   NIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQ 61
           +IP EIDDY+KESI HSLGLPVS HTLELKL ASE AQ+ L  +CL LQ+KL  +    +
Sbjct: 2   DIPSEIDDYVKESIDHSLGLPVSTHTLELKLRASEDAQRRLHNRCLYLQAKLQEKENLLE 61

Query: 62  SSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKK--------------LKAFANKLKM 121
             +AEA ++AQALKK +E+N  L+ E + L  QC K              L  F N+   
Sbjct: 62  RVRAEASMNAQALKKFVEENQKLATECATLLSQCSKWERECSLYDHDREALMDFGNE--- 121

Query: 122 AVDRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSS----SMEEDLVDSVLAAFI 181
           A  RA E   RV ELE+++  L+D+L F++++Y       S    S E  L+DSVLA  I
Sbjct: 122 ADQRAKEAEIRVHELEEDVRRLSDELQFYKHEYNMHAVSLSAEKRSTENTLLDSVLATLI 181

Query: 182 GETEVPAAE-FLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLR 241
            + +V +   FL  N+ + SC+RLL + N L P+TQK LSLAA++K LEK+KE L++ L 
Sbjct: 182 CKDDVASTHAFLEANSRHESCQRLLKMWNCLMPSTQKVLSLAAEVKSLEKDKEHLRINLN 241

Query: 242 TAQEEVKFLNEQIDYLMEDQTSTSHEEGSQRRCGGKPPASSDYASVKVKKNK 275
            A+EEVK L ++ + L E+      +   +R   G     +  AS K  K K
Sbjct: 242 RAEEEVKLLFKENNVLDEENKRLLRQYQKERSRHGSSGKQTGSASAKSNKRK 290

BLAST of MS001110 vs. ExPASy TrEMBL
Match: A0A2I4GQJ3 (intracellular protein transport protein USO1-like OS=Juglans regia OX=51240 GN=LOC109009952 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.8e-40
Identity = 126/290 (43.45%), Postives = 172/290 (59.31%), Query Frame = 0

Query: 4   PQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQSS 63
           PQE+DDYIKESI HSLGLPVSK TL LKL A E  Q+ LR +CLSLQ+KL  +    +  
Sbjct: 4   PQELDDYIKESIDHSLGLPVSKRTLLLKLSAFEDTQRRLRNRCLSLQNKLQEKEDVIERI 63

Query: 64  KAEAKLSAQALKKAIEKNGDLSEENSALTLQCKK--------------LKAFANKLKMAV 123
           +AE+ ++AQALKK +E+N  L+ E   L  QCKK              L  F N+   A 
Sbjct: 64  RAESSMNAQALKKFVEENQKLAVECGNLLSQCKKWERECSLYDQDREALMDFGNE---AD 123

Query: 124 DRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSSS----MEEDLVDSVLAAFIGE 183
           +RA E   RV ELE+E+  L+D+L F++++Y  R   SSS    +E +L++SVL   I +
Sbjct: 124 ERAKEAEIRVHELEEEVRRLSDELQFYKHEYDMRAVDSSSEETIIENNLLESVLTTLISK 183

Query: 184 TEV-PAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTA 243
            +V PA  FL  N+ + SC+ LL + N L P+TQKALSLAA++  LEK+KE L++ L  A
Sbjct: 184 DDVAPAHAFLEANSRHESCQILLKMWNCLRPSTQKALSLAAEVNTLEKDKERLKVNLNRA 243

Query: 244 QEEVKFLNEQIDYLMEDQTSTSHEEGSQRRCGGKPPASSDYASVKVKKNK 275
           +EEVK L E+ + L  +      +   +R   G     +  AS K  K K
Sbjct: 244 EEEVKMLFEENNILDAENKRLLRQFQKERNNHGSGGKHTGSASAKSNKRK 290

BLAST of MS001110 vs. ExPASy TrEMBL
Match: A0A5N5HQC1 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_033688 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.2e-40
Identity = 130/295 (44.07%), Postives = 172/295 (58.31%), Query Frame = 0

Query: 2   NIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQ 61
           N+PQE+DDYIKESI HSLGLPVS HTLELK   SE A++ L+ Q   L SKL  + L  +
Sbjct: 2   NLPQEVDDYIKESIDHSLGLPVSTHTLELKFRCSEEAKRRLQNQYSLLLSKLKKKELVLE 61

Query: 62  SSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKK--------------LKAFANKLKM 121
            +KAEA ++AQAL+K +E+N  L+ E + L  QC K              L  F N+   
Sbjct: 62  RAKAEASMNAQALRKFVEENQRLASECAHLVTQCNKWERECSLYDHDREALMDFGNE--- 121

Query: 122 AVDRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSS----SMEEDLVDSVLAAFI 181
           A  RA E   RV+ELE E+ EL D+L  ++ + +     SS    ++E+ L+DSVLA  I
Sbjct: 122 ADQRAKEAEIRVQELEDEVRELRDELGLYKYKMEMHSVDSSAEDTAIEDKLLDSVLATLI 181

Query: 182 GETE-VPAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLR 241
            + E V A  FL  N G  SC RLL + N L P++QK LSL A +K LEK+KE L++ LR
Sbjct: 182 NKDEAVSARAFLEANKGNESCARLLKMWNCLKPSSQKVLSLVAVVKTLEKDKEHLRINLR 241

Query: 242 TAQEEVKFL---NEQIDYLMEDQTSTSHEEGSQRRCGGKPPASSDYASVKVKKNK 275
           TA+EEVK L   N+ +D   +       +EG+    GGK    +D AS K  K K
Sbjct: 242 TAEEEVKLLFEENKVLDVENKRLLRLYQKEGNHSASGGK---HTDSASAKSNKRK 290

BLAST of MS001110 vs. TAIR 10
Match: AT4G09060.1 (unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-30
Identity = 96/256 (37.50%), Postives = 149/256 (58.20%), Query Frame = 0

Query: 1   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 60
           +N+ QE+++YIK++I HSLGLP+S  +L+ KL  +E +Q+ LR Q   L S+L  +    
Sbjct: 17  TNLSQEVEEYIKDTIDHSLGLPISMESLQKKLYTAEESQRRLREQYQGLISRLKEKDHVI 76

Query: 61  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLK--------------AFANKLK 120
              ++EA ++AQALKK +E+N  L+ E   L  QCKKL+               F N+  
Sbjct: 77  DRVRSEASMNAQALKKFVEENQKLASECGNLLSQCKKLEKECLLYHQDRDALMEFGNE-- 136

Query: 121 MAVDRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFH--SSSMEEDLVDSVLAAFIG 180
            + +RA E  ARVRELE E+  +++++  F+ Q    +    ++ +EEDL+DSVL + I 
Sbjct: 137 -SDERAREAEARVRELEDEIGRMSEEMQRFKRQIGDGEVENCTTPLEEDLLDSVLGSLIS 196

Query: 181 ETE-VPAAEFLLHNAGYSSCRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRT 237
           + E +    FL  N    SC+ LL   + L P+TQK LSL +K K+ EK KE + + L  
Sbjct: 197 KDETIMGRLFLEANIHDQSCQALLSKWDHLKPSTQKVLSLVSKAKKFEKEKECIIMNLAK 256

BLAST of MS001110 vs. TAIR 10
Match: AT1G14680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 91/250 (36.40%), Postives = 139/250 (55.60%), Query Frame = 0

Query: 2   NIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAAQ 61
           ++ +E+DD+IKE+I HSLGLP+S   L+ KL  +E +Q+ LR Q LSL S+L  +     
Sbjct: 2   DLSREVDDFIKETIDHSLGLPISMDVLQKKLYTAEESQRRLREQYLSLVSRLKEKEKVID 61

Query: 62  SSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKK--------------LKAFANKLKM 121
             ++EA ++AQ+LKK +E+N  L  E   L  QCKK              L  F N+   
Sbjct: 62  LVRSEASMNAQSLKKFVEENQKLGSEREDLVNQCKKWEKECFLYHQDRESLMEFGNETD- 121

Query: 122 AVDRANEETARVRELEQEMNELTDDLYFFQNQYQTRKFHSSSMEEDLVDSVLAAFIGETE 181
             +RA E  +RVRELE+E+ +++D++          K    S E+ LVDS+LA+F+ + E
Sbjct: 122 --ERAREAESRVRELEEEVRKMSDEI----------KSRIESEEDCLVDSILASFVSKDE 181

Query: 182 VPAAEFLLHNAGYSS---CRRLLYLSNSLSPATQKALSLAAKIKELEKNKEELQLLLRTA 235
             +   +   A       C  LL   + L P TQK +SL + +K +EK KE L + L  A
Sbjct: 182 SISLGRIFLEANSEEDKCCETLLRKWDQLKPTTQKFVSLVSMVKRIEKEKECLIMNLAKA 238

BLAST of MS001110 vs. TAIR 10
Match: AT4G09060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1). )

HSP 1 Score: 121.7 bits (304), Expect = 9.2e-28
Identity = 97/282 (34.40%), Postives = 152/282 (53.90%), Query Frame = 0

Query: 1   SNIPQEIDDYIKESIYHSLGLPVSKHTLELKLVASEAAQQHLRVQCLSLQSKLNHQILAA 60
           +N+ QE+++YIK++I HSLGLP+S  +L+ KL  +E +Q+ LR Q   L S+L  +    
Sbjct: 17  TNLSQEVEEYIKDTIDHSLGLPISMESLQKKLYTAEESQRRLREQYQGLISRLKEKDHVI 76

Query: 61  QSSKAEAKLSAQALKKAIEKNGDLSEENSALTLQCKKLK--------------AFANKLK 120
              ++EA ++AQALKK +E+N  L+ E   L  QCKKL+               F N+  
Sbjct: 77  DRVRSEASMNAQALKKFVEENQKLASECGNLLSQCKKLEKECLLYHQDRDALMEFGNE-- 136

Query: 121 MAVDRANEETARVRELEQEMNELTDDLYFFQNQYQ-------------TRKFH------- 180
            + +RA E  ARVRELE E+  +++++  F+ Q               ++K +       
Sbjct: 137 -SDERAREAEARVRELEDEIGRMSEEMQRFKRQIGDGEKLERSVRVNISKKMYLLAATYN 196

Query: 181 --------SSSMEEDLVDSVLAAFIGETE-VPAAEFLLHNAGYSSCRRLLYLSNSLSPAT 237
                   ++ +EEDL+DSVL + I + E +    FL  N    SC+ LL   + L P+T
Sbjct: 197 HFNIVENCTTPLEEDLLDSVLGSLISKDETIMGRLFLEANIHDQSCQALLSKWDHLKPST 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131622.13.9e-13799.26uncharacterized protein LOC111004753 [Momordica charantia][more]
KAG6585310.16.2e-5853.28hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7020228.13.7e-5552.59hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038885825.19.2e-4657.00uncharacterized protein LOC120076121 [Benincasa hispida][more]
EXB86655.12.6e-4043.5428 kDa ribonucleoprotein [Morus notabilis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BRI91.9e-13799.26uncharacterized protein LOC111004753 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
W9REI71.3e-4043.5428 kDa ribonucleoprotein OS=Morus notabilis OX=981085 GN=L484_013185 PE=4 SV=1[more]
A0A5N6RMD92.1e-4042.81Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017898 PE=4 SV=1[more]
A0A2I4GQJ34.8e-4043.45intracellular protein transport protein USO1-like OS=Juglans regia OX=51240 GN=L... [more]
A0A5N5HQC16.2e-4044.07Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
Match NameE-valueIdentityDescription
AT4G09060.11.5e-3037.50unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thal... [more]
AT1G14680.11.4e-2836.40unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G09060.29.2e-2834.40unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..241
NoneNo IPR availableCOILSCoilCoilcoord: 74..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..277
NoneNo IPR availablePANTHERPTHR35689EARLY ENDOSOME ANTIGENcoord: 2..272

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001110.1MS001110.1mRNA