MS001079 (gene) Bitter gourd (TR) v1

Overview
NameMS001079
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNDR1/HIN1-like protein 13
Locationscaffold36: 1324407 .. 1325123 (-)
RNA-Seq ExpressionMS001079
SyntenyMS001079
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCCATGGCGGAGCGGGTCCCTTCTCCTTCTCCTCCTCCTCCTCCAGCTGATTTTTTTTTCTCCTCCGGTACCTACGTCGTTCAGGTCCCCAAAGACCAAATCTACCGCATCCCTCCCCCGGAAAACGCCCTCATTGTTGAGCGCCACCGCAACCCCTCGTCCACCTCCAACCGCCGCCCTTGCTCCTCTTGTTGTTTTCGTTTCATGCTCCCGCTCGTTGTCGTGATCCTCCTTGTTGTCCTCCTCGTCATCCTCATCCCTCATCTCCGCAAACCCAAAGCCCCCATCTTCAAAATCTCAAAATTCTCCGCTCCCAGCTCCCGCCAATTCAACATCAAACTCAAACTCAAAAACCCAAATGGAAGTGGCGCCATTTCGTTTAAACAAGGTGGCCGGGCTTCCGTGTCGTTTAAAGATCAGGACGTCGCCACTGGGAAGTTCCCGGCCGTCCGGCAGCCGCATGATTCCTCCCAAGACGTGGCCTTGGCTCTCCCAACGGCCAAATCCTTGCCCAAGGAGATCCAAAAGAGCTTCAAAAACAACAAAACTAAACGCCACGTGTCACTCACTTTATACATGAAATTATCGGCGGAAACAAAGGCTGCCCAAACGGCAACTCGGAACGACAAATTTGTTGTCGTTTGCACATTCACTGTCGACTCCTTGGCCAAGGCCTCTCGGATATTGTCTCAAGAATGTGACACACAAAGACAA

mRNA sequence

CTCTCCATGGCGGAGCGGGTCCCTTCTCCTTCTCCTCCTCCTCCTCCAGCTGATTTTTTTTTCTCCTCCGGTACCTACGTCGTTCAGGTCCCCAAAGACCAAATCTACCGCATCCCTCCCCCGGAAAACGCCCTCATTGTTGAGCGCCACCGCAACCCCTCGTCCACCTCCAACCGCCGCCCTTGCTCCTCTTGTTGTTTTCGTTTCATGCTCCCGCTCGTTGTCGTGATCCTCCTTGTTGTCCTCCTCGTCATCCTCATCCCTCATCTCCGCAAACCCAAAGCCCCCATCTTCAAAATCTCAAAATTCTCCGCTCCCAGCTCCCGCCAATTCAACATCAAACTCAAACTCAAAAACCCAAATGGAAGTGGCGCCATTTCGTTTAAACAAGGTGGCCGGGCTTCCGTGTCGTTTAAAGATCAGGACGTCGCCACTGGGAAGTTCCCGGCCGTCCGGCAGCCGCATGATTCCTCCCAAGACGTGGCCTTGGCTCTCCCAACGGCCAAATCCTTGCCCAAGGAGATCCAAAAGAGCTTCAAAAACAACAAAACTAAACGCCACGTGTCACTCACTTTATACATGAAATTATCGGCGGAAACAAAGGCTGCCCAAACGGCAACTCGGAACGACAAATTTGTTGTCGTTTGCACATTCACTGTCGACTCCTTGGCCAAGGCCTCTCGGATATTGTCTCAAGAATGTGACACACAAAGACAA

Coding sequence (CDS)

CTCTCCATGGCGGAGCGGGTCCCTTCTCCTTCTCCTCCTCCTCCTCCAGCTGATTTTTTTTTCTCCTCCGGTACCTACGTCGTTCAGGTCCCCAAAGACCAAATCTACCGCATCCCTCCCCCGGAAAACGCCCTCATTGTTGAGCGCCACCGCAACCCCTCGTCCACCTCCAACCGCCGCCCTTGCTCCTCTTGTTGTTTTCGTTTCATGCTCCCGCTCGTTGTCGTGATCCTCCTTGTTGTCCTCCTCGTCATCCTCATCCCTCATCTCCGCAAACCCAAAGCCCCCATCTTCAAAATCTCAAAATTCTCCGCTCCCAGCTCCCGCCAATTCAACATCAAACTCAAACTCAAAAACCCAAATGGAAGTGGCGCCATTTCGTTTAAACAAGGTGGCCGGGCTTCCGTGTCGTTTAAAGATCAGGACGTCGCCACTGGGAAGTTCCCGGCCGTCCGGCAGCCGCATGATTCCTCCCAAGACGTGGCCTTGGCTCTCCCAACGGCCAAATCCTTGCCCAAGGAGATCCAAAAGAGCTTCAAAAACAACAAAACTAAACGCCACGTGTCACTCACTTTATACATGAAATTATCGGCGGAAACAAAGGCTGCCCAAACGGCAACTCGGAACGACAAATTTGTTGTCGTTTGCACATTCACTGTCGACTCCTTGGCCAAGGCCTCTCGGATATTGTCTCAAGAATGTGACACACAAAGACAA

Protein sequence

LSMAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPCSSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ
Homology
BLAST of MS001079 vs. NCBI nr
Match: XP_022132124.1 (NDR1/HIN1-like protein 13 [Momordica charantia])

HSP 1 Score: 455.7 bits (1171), Expect = 2.5e-124
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0

Query: 3   MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC 62
           MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC
Sbjct: 1   MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC 60

Query: 63  SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG 122
           SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG
Sbjct: 61  SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG 120

Query: 123 SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN 182
           SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN
Sbjct: 121 SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN 180

Query: 183 KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ
Sbjct: 181 KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 237

BLAST of MS001079 vs. NCBI nr
Match: XP_008445591.1 (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 5.5e-63
Identity = 137/238 (57.56%), Postives = 175/238 (73.53%), Query Frame = 0

Query: 5   ERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNRRPCS 64
           E  P   PPPPP   FFSSGTYVVQ+PKDQIYRIPPPENALIV+RHRNPS  TS+RR   
Sbjct: 5   ELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRR--R 64

Query: 65  SCCFRFMLPLVVVILLVVLLVILIPHL-RKPKAPIFKISKFS-APSSRQFNIKLKLKNPN 124
           SCCFR  LP+ +V+LL+++L +LIP L   PK P+FK++KF   PS+R FNI L + NPN
Sbjct: 65  SCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPN 124

Query: 125 GSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKN 184
            +G+ISFK   R S+SF+   +AT KFP +RQ H S ++VAL+L    + PKE+Q+  K+
Sbjct: 125 SAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRMKS 184

Query: 185 NKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           +KTK H SL+L M L AETK   +  RN KFVV C+FTV++L K SRILSQ+C+++RQ
Sbjct: 185 SKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of MS001079 vs. NCBI nr
Match: XP_004150661.1 (NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein Csa_017751 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 6.7e-61
Identity = 136/242 (56.20%), Postives = 173/242 (71.49%), Query Frame = 0

Query: 3   MAERVPSP--SPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNR 62
           MAE  P P   PPPPP   FFSSGTYVVQ+PKDQIYRIPPPENALIVERHRNPS  TS+R
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 63  RPCSSCCFRFMLPLVVVILLVVLLVILIPH-LRKPKAPIFKISKFS-APSSRQFNIKLKL 122
           R   SCCFR  LP+ V++LL+++L +L+P  L  PK P+ ++ KF   PS+R F I L +
Sbjct: 61  R--RSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDI 120

Query: 123 KNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQK 182
            NPN  G+ISFK   R S+SF+   +AT KFP +RQ H S + VAL+L    + PKE+++
Sbjct: 121 LNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKR 180

Query: 183 SFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQ 240
             KNNKTK H SL+L M L+A+T    +  RN KFVV C+FTV++L K SRILSQ+C+++
Sbjct: 181 RMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESE 240

BLAST of MS001079 vs. NCBI nr
Match: XP_038885823.1 (NDR1/HIN1-like protein 13, partial [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 135/242 (55.79%), Postives = 173/242 (71.49%), Query Frame = 0

Query: 1   LSMAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNR 60
           LSMAE     SPPPPP    FS+GTYVVQ+PKDQIYRIPPPENALIVERHRNPS +TS+R
Sbjct: 14  LSMAEPERVYSPPPPPDPSLFSAGTYVVQIPKDQIYRIPPPENALIVERHRNPSITTSSR 73

Query: 61  RPCSSCCFRFMLPLVVVILLVVLLVILIPH-LRKPKAPIFKISKFS-APSSRQFNIKLKL 120
           R   SCC R  LP+  V +L++LL +L+P  L  PK P+F + KF   PS+ +F+I L +
Sbjct: 74  R--RSCCLRIFLPIFFVFVLILLLALLLPPLLTPPKPPVFDLIKFKLTPSTHKFHINLDI 133

Query: 121 KNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQK 180
            NPN +G+ISFK   RAS+SF+ Q +AT KFP +R  H S + VAL+L    S PKE+Q+
Sbjct: 134 LNPNSAGSISFKSPSRASLSFRKQKLATAKFPLIRTEHGSQRHVALSLHAKSSFPKELQR 193

Query: 181 SFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQ 240
             K NK+K H+S++L M L AET +  +  R  KFVVVC+FTV++L K SRILSQ+C ++
Sbjct: 194 RMK-NKSKLHISMSLKMDLPAETTSRLSTRREVKFVVVCSFTVNTLGKNSRILSQDCQSE 252

BLAST of MS001079 vs. NCBI nr
Match: KAG6598677.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-52
Identity = 126/239 (52.72%), Postives = 163/239 (68.20%), Query Frame = 0

Query: 5   ERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNRRPCS 64
           ER+ S   P  P    FS GTYV+Q+PKDQIYRIPPPENA IVE HRNPS STS RR   
Sbjct: 5   ERIHSNLLPVHPG---FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSKRR--R 64

Query: 65  SCCFRFMLPLVVVILLVVLLVILIPH-LRKPKAPIFKISKFS-APSSRQFNIKLKLKNPN 124
           SCCFR  LP+ +V+L +++L +++P  L  PK P+FK++KF   PS+R F+I L + NPN
Sbjct: 65  SCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPN 124

Query: 125 GSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPT-AKSLPKEIQKSFK 184
            SG I  K    AS+SF+   VA  KFP ++Q H S + VALAL T + S PKE+++  K
Sbjct: 125 PSGFIELKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 184

Query: 185 NNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           NNK+K   S++L M L A TK   +  RN KFVVVC+FTV++L K S ILSQ+C ++RQ
Sbjct: 185 NNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238

BLAST of MS001079 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.9e-21
Identity = 83/255 (32.55%), Postives = 122/255 (47.84%), Query Frame = 0

Query: 3   MAERVPSPSPPPPPADFF--FSSG-----------TYVVQVPKDQIYRIPPPENALIVER 62
           MAERV     PP    F   FSSG           TYV+QVPKDQIYRIPPPENA   E+
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 63  HRNPSSTSNRRPCSSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFS----- 122
                  +NR  C  C   F+  + ++I+L  +   ++  + +P+AP + I  FS     
Sbjct: 61  LSR--KKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGIN 120

Query: 123 ----APSSRQFNIKLKLKNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQD 182
               +P S  FN+ ++ +N NG   + +++     V + D D++ G  P   QP  +   
Sbjct: 121 LNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTV 180

Query: 183 VALALPTAK-SLPKEIQKSFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFT 235
           V L L  +K  L   ++K  +N  +K+ V   L +K   + K     T      V C  T
Sbjct: 181 VKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVT 240

BLAST of MS001079 vs. ExPASy TrEMBL
Match: A0A6J1BS66 (NDR1/HIN1-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111005068 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0

Query: 3   MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC 62
           MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC
Sbjct: 1   MAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPC 60

Query: 63  SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG 122
           SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG
Sbjct: 61  SSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNG 120

Query: 123 SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN 182
           SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN
Sbjct: 121 SGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKNN 180

Query: 183 KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ
Sbjct: 181 KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 237

BLAST of MS001079 vs. ExPASy TrEMBL
Match: A0A5A7VCB9 (NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001420 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 137/238 (57.56%), Postives = 175/238 (73.53%), Query Frame = 0

Query: 5   ERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNRRPCS 64
           E  P   PPPPP   FFSSGTYVVQ+PKDQIYRIPPPENALIV+RHRNPS  TS+RR   
Sbjct: 5   ELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRR--R 64

Query: 65  SCCFRFMLPLVVVILLVVLLVILIPHL-RKPKAPIFKISKFS-APSSRQFNIKLKLKNPN 124
           SCCFR  LP+ +V+LL+++L +LIP L   PK P+FK++KF   PS+R FNI L + NPN
Sbjct: 65  SCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPN 124

Query: 125 GSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKN 184
            +G+ISFK   R S+SF+   +AT KFP +RQ H S ++VAL+L    + PKE+Q+  K+
Sbjct: 125 SAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRMKS 184

Query: 185 NKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           +KTK H SL+L M L AETK   +  RN KFVV C+FTV++L K SRILSQ+C+++RQ
Sbjct: 185 SKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of MS001079 vs. ExPASy TrEMBL
Match: A0A1S3BD32 (uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 137/238 (57.56%), Postives = 175/238 (73.53%), Query Frame = 0

Query: 5   ERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNRRPCS 64
           E  P   PPPPP   FFSSGTYVVQ+PKDQIYRIPPPENALIV+RHRNPS  TS+RR   
Sbjct: 5   ELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRR--R 64

Query: 65  SCCFRFMLPLVVVILLVVLLVILIPHL-RKPKAPIFKISKFS-APSSRQFNIKLKLKNPN 124
           SCCFR  LP+ +V+LL+++L +LIP L   PK P+FK++KF   PS+R FNI L + NPN
Sbjct: 65  SCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPN 124

Query: 125 GSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKSFKN 184
            +G+ISFK   R S+SF+   +AT KFP +RQ H S ++VAL+L    + PKE+Q+  K+
Sbjct: 125 SAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRMKS 184

Query: 185 NKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           +KTK H SL+L M L AETK   +  RN KFVV C+FTV++L K SRILSQ+C+++RQ
Sbjct: 185 SKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of MS001079 vs. ExPASy TrEMBL
Match: A0A0A0LK43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.2e-61
Identity = 136/242 (56.20%), Postives = 173/242 (71.49%), Query Frame = 0

Query: 3   MAERVPSP--SPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNR 62
           MAE  P P   PPPPP   FFSSGTYVVQ+PKDQIYRIPPPENALIVERHRNPS  TS+R
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 63  RPCSSCCFRFMLPLVVVILLVVLLVILIPH-LRKPKAPIFKISKFS-APSSRQFNIKLKL 122
           R   SCCFR  LP+ V++LL+++L +L+P  L  PK P+ ++ KF   PS+R F I L +
Sbjct: 61  R--RSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDI 120

Query: 123 KNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQK 182
            NPN  G+ISFK   R S+SF+   +AT KFP +RQ H S + VAL+L    + PKE+++
Sbjct: 121 LNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKR 180

Query: 183 SFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQ 240
             KNNKTK H SL+L M L+A+T    +  RN KFVV C+FTV++L K SRILSQ+C+++
Sbjct: 181 RMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESE 240

BLAST of MS001079 vs. ExPASy TrEMBL
Match: A0A6J1KBM3 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 123/239 (51.46%), Postives = 160/239 (66.95%), Query Frame = 0

Query: 5   ERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPS-STSNRRPCS 64
           ER  S   P  P    FS GTYV+Q+PKDQIYRIPPPENA IVE HRNPS STSNRR   
Sbjct: 5   ERTHSNLLPVHPG---FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSVSTSNRR--R 64

Query: 65  SCCFRFMLPLVVVILLVVLLVILIPH-LRKPKAPIFKISKFS-APSSRQFNIKLKLKNPN 124
           SCCFR  +P+ +V+L +++L +++P  L  PK PIFK++KF   PS+R F+I L + NPN
Sbjct: 65  SCCFRIFVPIFIVLLFILILALVLPPLLTPPKPPIFKLTKFRFTPSTRNFHIDLNILNPN 124

Query: 125 GSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPT-AKSLPKEIQKSFK 184
            SG I FK     S+ F+   VA  KFP ++Q H S + VALAL T + S PKE+++  K
Sbjct: 125 PSGFIEFKSPSHVSLFFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 184

Query: 185 NNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDTQRQ 240
           NNK+K   S++L M L A TK   +  R+ KFVV+C+FTV++  K S ILSQ+C  +RQ
Sbjct: 185 NNKSKLKTSMSLMMDLPAHTKGRLSTRRDVKFVVICSFTVNTFGKHSHILSQDCQIERQ 238

BLAST of MS001079 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 83/255 (32.55%), Postives = 122/255 (47.84%), Query Frame = 0

Query: 3   MAERVPSPSPPPPPADFF--FSSG-----------TYVVQVPKDQIYRIPPPENALIVER 62
           MAERV     PP    F   FSSG           TYV+QVPKDQIYRIPPPENA   E+
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 63  HRNPSSTSNRRPCSSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFS----- 122
                  +NR  C  C   F+  + ++I+L  +   ++  + +P+AP + I  FS     
Sbjct: 61  LSR--KKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGIN 120

Query: 123 ----APSSRQFNIKLKLKNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQD 182
               +P S  FN+ ++ +N NG   + +++     V + D D++ G  P   QP  +   
Sbjct: 121 LNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTV 180

Query: 183 VALALPTAK-SLPKEIQKSFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFT 235
           V L L  +K  L   ++K  +N  +K+ V   L +K   + K     T      V C  T
Sbjct: 181 VKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVT 240

BLAST of MS001079 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22
Identity = 83/255 (32.55%), Postives = 122/255 (47.84%), Query Frame = 0

Query: 3   MAERVPSPSPPPPPADFF--FSSG-----------TYVVQVPKDQIYRIPPPENALIVER 62
           MAERV     PP    F   FSSG           TYV+QVPKDQIYRIPPPENA   E+
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 63  HRNPSSTSNRRPCSSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFS----- 122
                  +NR  C  C   F+  + ++I+L  +   ++  + +P+AP + I  FS     
Sbjct: 61  LSR--KKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGIN 120

Query: 123 ----APSSRQFNIKLKLKNPNGSGAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQD 182
               +P S  FN+ ++ +N NG   + +++     V + D D++ G  P   QP  +   
Sbjct: 121 LNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTV 180

Query: 183 VALALPTAK-SLPKEIQKSFKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFT 235
           V L L  +K  L   ++K  +N  +K+ V   L +K   + K     T      V C  T
Sbjct: 181 VKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVT 240

BLAST of MS001079 vs. TAIR 10
Match: AT2G22180.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-19
Identity = 70/241 (29.05%), Postives = 122/241 (50.62%), Query Frame = 0

Query: 1   LSMAERVPSPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRR 60
           L+++    + SPP PP D      TYVVQVP+DQ+Y  PPPE+A  VE+       + ++
Sbjct: 55  LNLSPLPTTSSPPLPPPDSIPELETYVVQVPRDQVYWTPPPEHAKYVEKRSKNPEKNKKK 114

Query: 61  PCSSCCFRFMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNP 120
            CS     F + LV+   L+  +++++     P  P+F + + +   S  F + L+ +NP
Sbjct: 115 GCSKRLLWFFIILVIFGFLLGAIILILHFAFNPTLPVFAVERLTVNPS-NFEVTLRAENP 174

Query: 121 NGSGAISF--KQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALPTAKSLPKEIQKS 180
             +  + +  ++ G  S+++K++ + +GKFP + Q    S  V + L  +          
Sbjct: 175 TSNMGVRYMMEKNGVVSLTYKNKSLGSGKFPGLSQAASGSDKVNVKLNGSTK-----NAV 234

Query: 181 FKNNKTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSL--AKASRILSQECDT 238
            +   +K+ V L L M+L AE +A     RN + VV C   V  L  AK   I+S+ C++
Sbjct: 235 VQPRGSKQPVVLMLNMELKAEYEAG-PVKRNKEVVVTCDVKVKGLLDAKKVEIVSENCES 288

BLAST of MS001079 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-16
Identity = 66/234 (28.21%), Postives = 106/234 (45.30%), Query Frame = 0

Query: 14  PPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPCSSCCFRFML-P 73
           PPP       GTYV+++PKDQIYR+PPPENA    R+   S     + C   C  + L  
Sbjct: 53  PPP-------GTYVIKLPKDQIYRVPPPENA---HRYEYLSRRKTNKSCCRRCLCYSLSA 112

Query: 74  LVVVILLVVLLVILIPHLRKPKAPIFKIS---------KFSAPSSRQFNIKLKLKNPNGS 133
           L+++I+L  +       + +P  P F +S           S+P S    IKL+ +N  G 
Sbjct: 113 LLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGK 172

Query: 134 GAISFKQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALP-TAKSLPKEIQKSFKNN 193
             + +++G  A V F    +  G+F A +QP  +   +   L  ++  L    +K    +
Sbjct: 173 LGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTES 232

Query: 194 KTKRHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASRILSQECDT 237
           + K  V   L +K   + K     T      V C  TVD L  ++ + ++ C+T
Sbjct: 233 QKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCET 276

BLAST of MS001079 vs. TAIR 10
Match: AT4G39745.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.8e-11
Identity = 68/234 (29.06%), Postives = 100/234 (42.74%), Query Frame = 0

Query: 9   SPSPPPPPADFFFSSGTYVVQVPKDQIYRIPPPENALIVERHRNPSSTSNRRPCSSCCFR 68
           SPS PPPP D      TYVV VP+DQ+Y IPPP+NA          S+ +          
Sbjct: 67  SPSSPPPP-DPIPEIETYVVHVPRDQVYWIPPPDNA---------GSSKDAG-------- 126

Query: 69  FMLPLVVVILLVVLLVILIPHLRKPKAPIFKISKFSAPSSRQFNIKLKLKNPNGSGAISF 128
                          + +   + KP+ P+F + K     SR F I L  KNP  +  +++
Sbjct: 127 ---------------IAIRGEIIKPEPPVFNVKKLE--KSRHFEIMLTSKNPTSTMWVTY 186

Query: 129 KQGGRASVSFKDQDVATGKFPAVRQPHDSSQDVALALP---TAKSLPKEIQKSFKNNKTK 188
           K  G  S+++K++++  G FP +      S  V L L     A  LP E+          
Sbjct: 187 K--GLVSLTYKNKNLGQGNFPELSLAVSGSHTVNLKLDRSMNAAVLPPEV---------- 246

Query: 189 RHVSLTLYMKLSAETKAAQTATRNDKFVVVCTFTVDSLAKASR--ILSQECDTQ 238
             VSL L M L A         R  +  V C   V+ L  A +  I+S+ C+++
Sbjct: 247 --VSLVLTMGLDAGF-GTGLVKRAKEVAVTCDIKVNGLLDAHKVEIVSESCESE 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132124.12.5e-124100.00NDR1/HIN1-like protein 13 [Momordica charantia][more]
XP_008445591.15.5e-6357.56PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR... [more]
XP_004150661.16.7e-6156.20NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein C... [more]
XP_038885823.11.1e-5855.79NDR1/HIN1-like protein 13, partial [Benincasa hispida][more]
KAG6598677.15.7e-5252.72NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q9ZVD21.9e-2132.55NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1BS661.2e-124100.00NDR1/HIN1-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111005068 PE=4 SV... [more]
A0A5A7VCB92.7e-6357.56NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BD322.7e-6357.56uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=... [more]
A0A0A0LK433.2e-6156.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1[more]
A0A6J1KBM31.2e-5051.46NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111492422 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G27080.11.3e-2232.55Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G27080.21.3e-2232.55Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G22180.11.8e-1929.05hydroxyproline-rich glycoprotein family protein [more]
AT5G21130.14.1e-1628.21Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G39745.16.8e-1129.06hydroxyproline-rich glycoprotein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852:SF159HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 7..237
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 7..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001079.1MS001079.1mRNA