MS001057 (gene) Bitter gourd (TR) v1

Overview


Name	MS001057
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	3'-5' exoribonuclease 1-like
Location	scaffold36: 1170009 .. 1174170 (+)
RNA-Seq Expression	MS001057
Synteny	MS001057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTTAATCTGCAACACAGTGGAAACTCTATTGATGGTTACCAAGAACTTACAGATGAAATCAGTAGTCATGGCAGCAATGATGTTCCTGAAACAAACCACCCATTAGTTAACAATTTCATTGAACGTCCAAATGAATTTCACCACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCATTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAATGCTTCTGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCATCCAATATGTTCCTTTCAAAATATTTGAACAGAATTACCCTTGTGAATTTCGGTTGCAAGAGTTCCAATATTTTGTGGTTATAGACTTTGAAGCAACCTGTGATAAGGAAAGAAATCCCCATCCACAGGAGATAATTGAATTCCCATCTGTCATTGTAAGTAGTTTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCTTTTGAGTGATTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTTTGTTGGCACCTTAGCTTAAAATATATATATATTTTTTAAAAGCAATTACTCTTGGAGGTTGCATGTTGTTGGGATGGAACAAACTTGGTGTGTTGTTTATTATTGGCAAACCTATAAGTTCCTTGTGAATTTCCTTATTCTGGCCTAGATTTTATTTTTGAAATTATTTGAACCTTCTCTGTTTGTCTTTCCATTCTCCTCCACAGTTTTAGTTCGGTACATAATTTGCTTTTGATGGTTCAATAATTTTCTTATGTCGTGAGATGCATTTGAAGTTTTGTTCAACCATGTGGCCTGTCACTCCCTAATCCCTACCTAGAATATTAAGAAGCTAAATTTGGAAGCTAAGTTTTATTGGCTCTTGTGTAAATTGTCCCCTATTTTCCATTACCCTTTTGTCCAATTGGGTTTTTGTAATTCCCTTGGATTGAGGTCTTTTCTCCCCCTTTAAGTGAAATTGTTTCTCATTTAAAAAAAAAAGGTTGGAAGCTAAGTTAAAACATTCTTCTATTTTAAAAAATAAGAAGCCTTTCTTTGATGCAATTTAGCAAGGTCCTCTTTTTATTTTATTTCATTTTTTTATTTTTTTAAGTTTAGACAAAATAACACAAATAGTATTTAGCTGTTTTCATGCTTTTTCATTGTTGTTATGTTAATTAATTGTTCATATAATCACACATAGCAAAGTAAAACACAAAAGAATAAAAAATATATTTTCTGATATATATTATTAGAAAAACAATAGAAAATATATTTGGGAGCTAGTTAGATTTAATACCTCTGCGTGGATGTCGGTTTCTAAGGCTTTTTGTAATTACTAGATAGGTGTAATTCTTTTGAGTTGAGGTCCCTTATTATAGATTGGTTTCCTTTGACGGACTNNNNNNATTTCATTTTCTTAATTTTTTTTTTTTTAAAGAAAAACCATAGAAAATAGTTTGAGGAAGTTAGTTCATCAAACAAACTTACACCTAAATAGCCTCAAGTATAATAAGTATTGTTTTTATCAGTATTTCAGGTTCTCATAAGATTATTTTTAAGGTGCATACTTGCTCGAACACCTATAGCTATGTGAAAATTCTTTAAATTGTTGACACGTCCACATCTTTCTAGATATTGGACATTAAGAGAGTGTTTGAAGCTAAGTTGTTTGGCACGATTATTGTTAGAAAGGATTCTTTGAGTAGAAAACTTGTTTGGCACGATTATTGTTAGAAATTGTTTTCAAAAGGAAAAAATAGAAATAAGTATCAATATTTTGATGTTTTTATAATATTTAAGAGGTTGTTTGATTCAAATTTAATATCATTTAAATTATAATATTAAAATATAAATGGAAGCTATTTCTAGGAGCTTCCCTTGATTTCTCAATAATGTTAAATTTATTGTAGGGGTGGGGGGAGCTCATTCACTTTTAGGAGAATCATTGGATTGACAATGCATCTTTTAGTGTGAGCTTTCTTGCGTTTTTAATTTAGTCCTTGTACTGCAAGCTTTGGAAGGTCAGTATTCCAAAGCATGTTGGTTTTTCTTTTGGGTTGTTTCCTTGGGGAGGATTAACGCTATTGATTTCATCTGGAGATCTTCTTCCTTGGCGCTCGGTCTGCATTGGCGTGTGCTTTGCAAGCATGTGTTTTAGGATATTAATCGTATTTTTCGGAGGTGTGCATTCACTGTAAATATTTGGTCCTTTGGGTTGTCTTAGGTTCCTCAAAGGGGTTGTAGTTGAATATTCCCATTGGGAAGGGGAAGCATTTGTGGTAGTGCATTTCCCTTGCAAGCCTTTGCAATCTGTGGGTTGCTAGGACCAAGAAAGTGTTTCATGGTGTCAATGTTTCGTGGGAGGAGGTTTGGAGCATTACGCACTTCATTGCCTCCCCGTGGGTCTATGTTAATAGTACTTTTTGTGATTTCCATTATTTTTGTTGTTAATTATTGGAGTAAATTATAGTGACTGATTACCTTAATGTTGGAACGGGAAGACTCTAACTCCCTTCTCATGTGACATTAATTCCCTTATACACACTTCGCTTCCCTTAATGTTGGAATGGGAAGACTCTAATTCTCAATAATATTTACTTGGATGGAATATTTAGGGGATGTATCTGGTTTCATGAAAACCTTTTGAGTGTTGGAGTCTCATTCTGTTTCCTTTAAAATCGTATTTGGTTGCTGCTTATCTAGTTTAAGATCTTCTGATTTTCATTTGACCTCATTTCGTTTTTATAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGATAAATGGCTTGAAAATAAAGGGATAAAGAATACTCATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGTGTCATGTTAGAGTCAGAATGCCGATTCAAGAAGATTCGAAAGCCTCCATATTTTAACCGGTAAATGATCGTCATAGAAATTGTGTTTACATAGTGTACAAATAATAACAACACTATACACCTACACAATCATGAATTCGGAAGTGCACTGGAAGAACTCAAGTTCCCGGGAACAAAATCATTTTAGAATCTTAGATGCTCTCGATTGTGCTTTGCTGTAAGTAATTAGACGAGGTAGGAGCATCCCACATTTGGAGTCTAAAACATCGCAGGAAAACAAATCAATCAGTTAATCATGGATACCTTCATCCCCTAGCAATTTTCCAGTCAACTTCTGACAACTTTAGCTTCCTGTGCAAATTTCTCCTAGATGGCAATCACGTGTTCAGTCTTTTTATTTATCTAATACTACAGTTTAAAACTTTTAGCGAGAAAATGTTCCAACATTCTGAGGGAAAACGCTATCTTTTAGGCTTTTAGCCTTTTAACGGACTTCTATAGCCGCACATCTTCTTGTAGACCAATAGTTCCTTTGCATTGTTCGTGGACAGGCAGTTCCACGTTCTTCGAGTTAAAAACATCACAATAAGAAATGATGTATGCATTCTCACATACTCTATGAATGAAGCACAAAATGTTACCACCATATGTTTGTGCAATAAAGTTTCACTTGTAAAAAAACATTGGCGTAATTGCAAAAGAACTATATTTATATTTAGTACTACAATTTAGTTCTTACTTCTCTCTTCTGATGTGATAGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTTGGTGGAGCGCGATGCAATCTGAAGGAAGCTGTTGAGATGGCAGGCTTGGCATGGCAAGGTCGTCCTCACTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCTCCGTTCTTATGCACAGAGGCTTCAGATTTTCCATCACCAATTCATTGATGTGGCAGACTTATGACTGCCCATTGCCATGGAAACAATCCCCAGATGCACTGACCCTCCCTCCGCATCCGCCAATAAAACCGAAGCCCATGCAAGTTCCCATTGTCCAGTACTACCCGTACTGTTTCTGTGGGGTTAGGAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAACTGGACTGCAACTAAGGGGGCACGTTGCCATTACTTTGAATGGGCCTCTCCC

mRNA sequence

TTTGCAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTTAATCTGCAACACAGTGGAAACTCTATTGATGGTTACCAAGAACTTACAGATGAAATCAGTAGTCATGGCAGCAATGATGTTCCTGAAACAAACCACCCATTAGTTAACAATTTCATTGAACGTCCAAATGAATTTCACCACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCATTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAATGCTTCTGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCATCCAATATGTTCCTTTCAAAATATTTGAACAGAATTACCCTTGTGAATTTCGGTTGCAAGAGTTCCAATATTTTGTGGTTATAGACTTTGAAGCAACCTGTGATAAGGAAAGAAATCCCCATCCACAGGAGATAATTGAATTCCCATCTGTCATTGTAAGTAGTTTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCTTTTGAGTGATTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGATAAATGGCTTGAAAATAAAGGGATAAAGAATACTCATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGTGTCATGTTAGAGTCAGAATGCCGATTCAAGAAGATTCGAAAGCCTCCATATTTTAACCGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTTGGTGGAGCGCGATGCAATCTGAAGGAAGCTGTTGAGATGGCAGGCTTGGCATGGCAAGGTCGTCCTCACTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCTCCGTTCTTATGCACAGAGGCTTCAGATTTTCCATCACCAATTCATTGATGTGGCAGACTTATGACTGCCCATTGCCATGGAAACAATCCCCAGATGCACTGACCCTCCCTCCGCATCCGCCAATAAAACCGAAGCCCATGCAAGTTCCCATTGTCCAGTACTACCCGTACTGTTTCTGTGGGGTTAGGAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAACTGGACTGCAACTAAGGGGGCACGTTGCCATTACTTTGAATGGGCCTCTCCC

Coding sequence (CDS)

TTTGCAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTTAATCTGCAACACAGTGGAAACTCTATTGATGGTTACCAAGAACTTACAGATGAAATCAGTAGTCATGGCAGCAATGATGTTCCTGAAACAAACCACCCATTAGTTAACAATTTCATTGAACGTCCAAATGAATTTCACCACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCAGCATTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAATGCTTCTGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCATCCAATATGTTCCTTTCAAAATATTTGAACAGAATTACCCTTGTGAATTTCGGTTGCAAGAGTTCCAATATTTTGTGGTTATAGACTTTGAAGCAACCTGTGATAAGGAAAGAAATCCCCATCCACAGGAGATAATTGAATTCCCATCTGTCATTGTAAGTAGTTTGACTGGCCAACTGGAAGCTTGCTTTCAGACATATGTGCGCCCAACTTGCAATCAGCTTTTGAGTGATTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGATAAATGGCTTGAAAATAAAGGGATAAAGAATACTCATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGTGTCATGTTAGAGTCAGAATGCCGATTCAAGAAGATTCGAAAGCCTCCATATTTTAACCGATGGATCAACTTAAAAATTCCATTTCGTGAGGTTTTTGGTGGAGCGCGATGCAATCTGAAGGAAGCTGTTGAGATGGCAGGCTTGGCATGGCAAGGTCGTCCTCACTGTGGTCTTGATGATGCCAAGAACACTGCTCGTTTACTCTCCGTTCTTATGCACAGAGGCTTCAGATTTTCCATCACCAATTCATTGATGTGGCAGACTTATGACTGCCCATTGCCATGGAAACAATCCCCAGATGCACTGACCCTCCCTCCGCATCCGCCAATAAAACCGAAGCCCATGCAAGTTCCCATTGTCCAGTACTACCCGTACTGTTTCTGTGGGGTTAGGAGCAGCAGAGGTATGGTTCGCAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAACTGGACTGCAACTAAGGGGGCACGTTGCCATTACTTTGAATGGGCCTCTCCC

Protein sequence

FAESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFIERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQNYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAKNTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQYYPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP

Homology

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BLAST of MS001057 vs. NCBI nr
Match: XP_022132029.1 (uncharacterized protein LOC111005001 [Momordica charantia] >XP_022132030.1 uncharacterized protein LOC111005001 [Momordica charantia])

HSP 1 Score: 879.8 bits (2272), Expect = 9.2e-252
Identity = 406/408 (99.51%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ
Sbjct: 68  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT
Sbjct: 128 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNL+EAVEMAGLAWQGRPHCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLREAVEMAGLAWQGRPHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKP+QVPIVQY
Sbjct: 308 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPVQVPIVQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. NCBI nr
Match: XP_022997162.1 (3'-5' exoribonuclease 1-like [Cucurbita maxima])

HSP 1 Score: 810.8 bits (2093), Expect = 5.2e-231
Identity = 371/408 (90.93%), Postives = 391/408 (95.83%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNG+PF+LQHSGNS DG+QELTDEIS HGSND+PETNH L NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSW AFHFDSQKVQQCQM+ASECQFYSLPVENR QY PFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYFPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCP  WKQSP+A+TLPP PP+KPKP+ VPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPEAMTLPPQPPMKPKPVHVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. NCBI nr
Match: XP_023546233.1 (uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806.2 bits (2081), Expect = 1.3e-229
Identity = 369/408 (90.44%), Postives = 390/408 (95.59%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNG+PF+LQHSGNS DG+QE++DEIS HGSND+PETNH L NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQEISDEISCHGSNDIPETNHLLANNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSW AFHFDSQKVQQCQM+ASECQFYSLPVENR QYVPFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYVPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCP  WKQSP A+TL P PP+KPKP+ VPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. NCBI nr
Match: XP_038885029.1 (3'-5' exonuclease eri1-like [Benincasa hispida])

HSP 1 Score: 805.1 bits (2078), Expect = 2.9e-229
Identity = 366/408 (89.71%), Postives = 390/408 (95.59%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNGMPF+LQHSGNS DG+QELTDEIS   +ND+PETNHPL+NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCRANNDIPETNHPLLNNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSWPAFHFDSQKVQQCQMN S+CQ YSLPVENR+QYVPFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMNTSDCQLYSLPVENRVQYVPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY CE RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCEVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE +GIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL+W+GR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLSWEGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCPL WKQ P+ +TLP  PP+KPKP+QVPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTTDCPLQWKQFPETVTLPLQPPMKPKPLQVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           +PYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARC YFEWASP
Sbjct: 368 FPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCQYFEWASP 415

[Close]

BLAST of MS001057 vs. NCBI nr
Match: XP_022962079.1 (uncharacterized protein LOC111462643 [Cucurbita moschata])

HSP 1 Score: 803.9 bits (2075), Expect = 6.4e-229
Identity = 369/408 (90.44%), Postives = 388/408 (95.10%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNG+PF+LQHSGNS DG+QELTDEIS HGSND+PETNH L NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSW A HFDSQKVQQCQM+ASECQFYSLPVENR QY PFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQMSASECQFYSLPVENRFQYFPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCP  WKQSP A+TL P PP+KPKP+ VPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. ExPASy Swiss-Prot
Match: A8K979 (ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-39
Identity = 86/211 (40.76%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 131 QEFQYFVVIDFEATC-DKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLLSD 190
           Q F Y +VIDFE+TC +  ++ H QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+
Sbjct: 32  QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91

Query: 191 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEN-KGIKNTHFAV---------------VT 250
           FC +LTGI+Q QVD GV L   L +  KW+   +  KN  FA                VT
Sbjct: 92  FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151

Query: 251 WSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGR 310
           WS+WD  V LE EC+ K++ KP + N WI+L+  ++  +      L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211

Query: 311 PHCGLDDAKNTARLLSVLMHRGFRFSITNSL 325
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242

[Close]

BLAST of MS001057 vs. ExPASy Swiss-Prot
Match: Q5HZL1 (ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-39
Identity = 85/210 (40.48%), Postives = 125/210 (59.52%), Query Frame = 0


Query: 131 QEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLLSDF 190
           Q F+Y ++IDFE+TC K+     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDF
Sbjct: 33  QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDF 92

Query: 191 CRDLTGIQQIQVDRGVTLNEALLRHDKWLE----NKGI------------KNTHFAVVTW 250
           C +LTGI Q QVD GV L   L + + W++     KGI            ++   A VTW
Sbjct: 93  CTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTW 152

Query: 251 SNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRP 310
           S+WD  V L  ECR K+++KP   N WI+L+  ++  +      L  A++  G+ + GR 
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212

Query: 311 HCGLDDAKNTARLLSVLMHRGFRFSITNSL 325
           H GLDD++NTA+L S ++  G    IT SL
Sbjct: 213 HSGLDDSRNTAKLASRMICDGCVMKITKSL 242

[Close]

BLAST of MS001057 vs. ExPASy Swiss-Prot
Match: Q5BKS4 (ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-37
Identity = 82/211 (38.86%), Postives = 121/211 (57.35%), Query Frame = 0


Query: 131 QEFQYFVVIDFEATCDKERNPHPQ-EIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLLSD 190
           Q + Y +V+DFE+TC  +   H   EIIEFP+V++++ TG++E+ F  YV+P  + +LS+
Sbjct: 32  QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91

Query: 191 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNT----------------HFAVVT 250
           FC +LTGI+Q+QVD GV L   L +  KW+     + T                  A VT
Sbjct: 92  FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151

Query: 251 WSNWDCRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGR 310
           WS+WD  V LE ECR K++ KP + N WI+L+  +R  +      L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211

Query: 311 PHCGLDDAKNTARLLSVLMHRGFRFSITNSL 325
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242

[Close]

BLAST of MS001057 vs. ExPASy Swiss-Prot
Match: A6QLH5 (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-36
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 128 FRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLL 187
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 188 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGI--KNTHFAVVTWSNWDCRVMLES 247
           + FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 248 ECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRPHCGLDDAKNT 307
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GRPH G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 308 ARLLSVLMHRGFRFSITN 323
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

[Close]

BLAST of MS001057 vs. ExPASy Swiss-Prot
Match: O43414 (ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-36
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 128 FRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNQLL 187
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 188 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGI--KNTHFAVVTWSNWDCRVMLES 247
           + FC +LTGI Q  VD   +L + L R D+W+  +G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 248 ECRFKKIRKPPYFNRWINLKIPFREVFG-GARCNLKEAVEMAGLAWQGRPHCGLDDAKNT 307
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GRPH G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 308 ARLLSVLMHRGFRFSITN 323
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

[Close]

BLAST of MS001057 vs. ExPASy TrEMBL
Match: A0A6J1BRX4 (uncharacterized protein LOC111005001 OS=Momordica charantia OX=3673 GN=LOC111005001 PE=4 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 4.5e-252
Identity = 406/408 (99.51%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ
Sbjct: 68  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT
Sbjct: 128 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNL+EAVEMAGLAWQGRPHCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLREAVEMAGLAWQGRPHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKP+QVPIVQY
Sbjct: 308 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPVQVPIVQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. ExPASy TrEMBL
Match: A0A6J1K486 (3'-5' exoribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492144 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.5e-231
Identity = 371/408 (90.93%), Postives = 391/408 (95.83%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNG+PF+LQHSGNS DG+QELTDEIS HGSND+PETNH L NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSW AFHFDSQKVQQCQM+ASECQFYSLPVENR QY PFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWQAFHFDSQKVQQCQMSASECQFYSLPVENRFQYFPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCP  WKQSP+A+TLPP PP+KPKP+ VPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPEAMTLPPQPPMKPKPVHVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. ExPASy TrEMBL
Match: A0A6J1HFU9 (uncharacterized protein LOC111462643 OS=Cucurbita moschata OX=3662 GN=LOC111462643 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 3.1e-229
Identity = 369/408 (90.44%), Postives = 388/408 (95.10%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNG+PF+LQHSGNS DG+QELTDEIS HGSND+PETNH L NNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGIPFSLQHSGNSADGFQELTDEISCHGSNDIPETNHLLANNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNSGSW A HFDSQKVQQCQM+ASECQFYSLPVENR QY PFK+FEQ
Sbjct: 68  ERPNEFHNKPAYQHNSGSWQAVHFDSQKVQQCQMSASECQFYSLPVENRFQYFPFKMFEQ 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIVSS+TGQLEACFQTYVRPT
Sbjct: 128 NYHCDRRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE KGIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGA+CNLKEAVEMAGLAWQGR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKLPFREVFGGAQCNLKEAVEMAGLAWQGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL++LMHRGFRFSITNSLMWQT DCP  WKQSP A+TL P PP+KPKP+ VPI+QY
Sbjct: 308 NTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQSPGAMTLTPQPPMKPKPVHVPIIQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           YPYCFCGVRSSRGMVRKPGPKQGS FFGCGNWTATKGARCHYFEWASP
Sbjct: 368 YPYCFCGVRSSRGMVRKPGPKQGSCFFGCGNWTATKGARCHYFEWASP 415

[Close]

BLAST of MS001057 vs. ExPASy TrEMBL
Match: A0A1S3BCJ6 (3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.2e-227
Identity = 362/408 (88.73%), Postives = 388/408 (95.10%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           ESMQRNCEASIKCLQNNGMPF+LQHSGNS DG+QELTDEIS H +ND+PETNHPLVNNFI
Sbjct: 8   ESMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFI 67

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNS SWPAFHF+SQKVQQCQM+AS+CQFYSLPVENR QY PFK+FE 
Sbjct: 68  ERPNEFHNKPAYQHNSSSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQYFPFKMFEH 127

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIV+S+TG LEACFQTYVRPT
Sbjct: 128 NY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACFQTYVRPT 187

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE +GIKNT+FAVVTWSNWDCRVM
Sbjct: 188 CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWSNWDCRVM 247

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GR HCGLDDAK
Sbjct: 248 LESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAHCGLDDAK 307

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL+++MH+GFRFSITNSLMWQT DCPL WKQSP+ +T PP PP+KPKPM +PIVQY
Sbjct: 308 NTARLLALIMHKGFRFSITNSLMWQTTDCPLQWKQSPETVTFPPQPPMKPKPMHIPIVQY 367

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           +PYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP
Sbjct: 368 FPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 414

[Close]

BLAST of MS001057 vs. ExPASy TrEMBL
Match: A0A5A7VEQ6 (3'-5' exoribonuclease 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001140 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 6.5e-227
Identity = 361/408 (88.48%), Postives = 388/408 (95.10%), Query Frame = 0


Query: 3   ESMQRNCEASIKCLQNNGMPFNLQHSGNSIDGYQELTDEISSHGSNDVPETNHPLVNNFI 62
           +SMQRNCEASIKCLQNNGMPF+LQHSGNS DG+QELTDEIS H +ND+PETNHPLVNNFI
Sbjct: 67  KSMQRNCEASIKCLQNNGMPFSLQHSGNSADGFQELTDEISCHANNDIPETNHPLVNNFI 126

Query: 63  ERPNEFHHKPAYQHNSGSWPAFHFDSQKVQQCQMNASECQFYSLPVENRIQYVPFKIFEQ 122
           ERPNEFH+KPAYQHNS SWPAFHF+SQKVQQCQM+AS+CQFYSLPVENR QY PFK+FE 
Sbjct: 127 ERPNEFHNKPAYQHNSSSWPAFHFESQKVQQCQMSASDCQFYSLPVENRFQYFPFKMFEH 186

Query: 123 NYPCEFRLQEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT 182
           NY C+ RLQEFQYFVVIDFEATCDK+RNPHPQEIIEFPSVIV+S+TG LEACFQTYVRPT
Sbjct: 187 NY-CDVRLQEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACFQTYVRPT 246

Query: 183 CNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLENKGIKNTHFAVVTWSNWDCRVM 242
           CNQ LSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLE +GIKNT+FAVVTWSNWDCRVM
Sbjct: 247 CNQHLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWSNWDCRVM 306

Query: 243 LESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGLDDAK 302
           LESECRFKKIRKPPYFNRWINLK+PFREVFGGARCNLKEAVEMAGL W+GR HCGLDDAK
Sbjct: 307 LESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAHCGLDDAK 366

Query: 303 NTARLLSVLMHRGFRFSITNSLMWQTYDCPLPWKQSPDALTLPPHPPIKPKPMQVPIVQY 362
           NTARLL+++MH+GFRFSITNSLMWQT DCPL WKQSP+ +T PP PP+KPKPM +PIVQY
Sbjct: 367 NTARLLALIMHKGFRFSITNSLMWQTTDCPLQWKQSPETVTFPPQPPMKPKPMHIPIVQY 426

Query: 363 YPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 411
           +PYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP
Sbjct: 427 FPYCFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWASP 473

[Close]

BLAST of MS001057 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 7.3e-21
Identity = 57/203 (28.08%), Postives = 89/203 (43.84%), Query Frame = 0


Query: 131 QEFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPT--CNQLLS 190
           QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT    Q ++
Sbjct: 124 QEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAIN 183

Query: 191 DFCRDL---TGIQQIQVDRGVTLNEA-------LLRHDKWLENKGIKNTHFAVVTWSNWD 250
            +        G+ ++  D  +   +        L  HD W ++        A VT  NWD
Sbjct: 184 KYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWD 243

Query: 251 CRVMLESECRFKKIRKPPYFNRWINLKIPFREVFGGARCNLKEAVEMAGLAWQGRPHCGL 310
            +  +  +C    I  PPYF  WINLK  +   +G     +   +   G+   G  H G+
Sbjct: 244 IKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGI 303

Query: 311 DDAKNTARLLSVLMHRGFRFSIT 322
           DD KN  R++  ++  G    +T
Sbjct: 304 DDTKNITRVVQRMLSEGAVLKLT 317

The following BLAST results are available for this feature:

BLAST of MS001057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132029.1	9.2e-252	99.51	uncharacterized protein LOC111005001 [Momordica charantia] >XP_022132030.1 uncha...	[more]
XP_022997162.1	5.2e-231	90.93	3'-5' exoribonuclease 1-like [Cucurbita maxima]	[more]
XP_023546233.1	1.3e-229	90.44	uncharacterized protein LOC111805389 [Cucurbita pepo subsp. pepo]	[more]
XP_038885029.1	2.9e-229	89.71	3'-5' exonuclease eri1-like [Benincasa hispida]	[more]
XP_022962079.1	6.4e-229	90.44	uncharacterized protein LOC111462643 [Cucurbita moschata]	[more]

BLAST of MS001057 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8K979	3.4e-39	40.76	ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2	[more]
Q5HZL1	3.4e-39	40.48	ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1	[more]
Q5BKS4	1.1e-37	38.86	ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1	[more]
A6QLH5	4.6e-36	39.90	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]
O43414	4.6e-36	39.90	ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2	[more]

BLAST of MS001057 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRX4	4.5e-252	99.51	uncharacterized protein LOC111005001 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1K486	2.5e-231	90.93	3'-5' exoribonuclease 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492144 PE=4 SV...	[more]
A0A6J1HFU9	3.1e-229	90.44	uncharacterized protein LOC111462643 OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A1S3BCJ6	2.2e-227	88.73	3'-5' exoribonuclease 1-like OS=Cucumis melo OX=3656 GN=LOC103488427 PE=4 SV=1	[more]
A0A5A7VEQ6	6.5e-227	88.48	3'-5' exoribonuclease 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of MS001057 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	7.3e-21	28.08	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 135..317 e-value: 1.9E-18 score: 77.3
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 137..308 e-value: 2.2E-25 score: 90.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 126..334 e-value: 1.5E-74 score: 252.2
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 3..409
None	No IPR available	PANTHER	PTHR23044:SF64	ERI1 EXORIBONUCLEASE 2-LIKE	coord: 3..409
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 136..308 e-value: 3.34859E-66 score: 206.688
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 133..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001057.1	MS001057.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding