MS001035 (gene) Bitter gourd (TR) v1

Overview


Name	MS001035
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor BIM2
Location	scaffold36: 986777 .. 991290 (-)
RNA-Seq Expression	MS001035
Synteny	MS001035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTGGAGGACGAAGAGTACGAGGAGGACGAGTTGGTTGCTAAAAGAGAGGGGCCTTCTTCTACTTCCAATGCTAACAATAGCATCGGAAACAGCAAAGGTATCTTTGTTTCTGCACGTTGGCCTTCTTCTTTTTTCATTCTAGATCCAATTCTTCAAGTTATGATATCGTACGATGTCATGCCATTCTTTGCCTTTCTTATTTCGGTGTTCGTTTCTTGCGCTGATTCCTCTTTAATTGATTTGGCTCTCAATTGTGGATTTCATTTTACTATGTTGCTCTCCCTATATCTAAAGTTTTCTTTTTTTGGTTATTATTTTTTTGTGTTTCGAGATACTAAAGTTTTACTTTCTGATGATGTCTATTTGATTCTGGCGGGTAAATTAATACGTTTCTGATTTTAGTATCGGTTATTTAGAATTTCTTTTATAAGGGAATTGGTTTAATTTTATCTAAGTTGTTAATTGATTCTTTTTATCTGTAATTGAACTTGGAACTAGATGCGAAGAACAACGACAAGGCTAGCGCCATACGGTCAAAGCACTCTGTTACGGAGCAGCGCAGACGAAGCAAGATAAATGAGAGGTAATCTTGAAAAACAGTCATTAAGGTGCTTCAAGATTGTTAGAGAAATTACTGTGATCACAGTTGGCAGGTCTTTTCGTTCTGTTGTTTGTAAATCATGTTGAATGACGATTTTATCTCAGTGATTGACATATTACAGAGAGGATATGCACCTCTTACTATGATCCGAGGAGCATGAAGTTTATAAGTTGCAATTAAATGGACAGCACTTGACCAAGATCTATTTTATTTCAGATTCCAGATTTTGAGAGAGCTTATACCTCACAGCGATCAAAAGAGAGACACTGCATCATTCTTGTTGGAGGTATACGGTTTCTTATTGAATTTGGGATAATGTTGAAGCTGTAAAGTATCTATTTTTCTTCTGCTATTTTCTAGTCTTTTATTATCTTCCAGTGACTAAAACTAGTATTTCTATGCAGGTGATTGAGTATGTCCAGTTTTTACAGGAAAAGGTGCAGAAGTACGAGGGTTCATATCAGAATTGGAGCGGGGAACCCACTAAGTTAATACCATGGGTGAAGACCTAATGCTTTTCCTTTATCGTGTTTGGGAGTTATCATTCACTAACTTGCTTGTCATTATTGAATGCTTCCTTGCTTTATATTTGTGATAACATAGCATAAGATTAGCTATGAAAATTTAGAAGGTATAAGAAATATTAGTTGGTGGGACAACATGGGCATTTTGTCCCTCGGATCATTAATTGCGGAGCTACAGTGATGTAGCTTTCTTTTCATTGTCCTCTCTGTTTCTTTATATTTCTTACTACCTATTCCGTTTCTATTTTTTTTTCAGATAGAAATTAAGTTAGTTTCACGGGTTGGGCTGGGCTTAAAGCACATTCACTATATCGTAAACTGAAGGTGGAAAGATACTAATGGAAGCAAAATATCGTTTTGGGATGATGTATCAGAAGATAACTGTCCTCTAGAAAGCACATTCTTCAGATCATATGATATAGCAATGGACAAAGCTGGTTTTGTGAAAGGTAATTGGGACAAAAATATGAGGTGGAGAGTTTTCCTAAGAAGTCATTCGGAAGATGAAATTAGTCATTATAGGAAAAACTATCCCTCTACTCTCTAGTGAAAAGAGGTGCTGAAGATGTAAAGGTTTGAACTTTATTCCATCTTTTATCTTGCTCAAACAAAATTTTATTTATGAAGCTCATAGATTCAGAGTATGCTCTTGAGAGGAATGTAACTAATATGGTGCCGGAAAGAATGTCTCAAAGAAAATTGAAGTTCTCCTATGGATCGCCTGATTTGAACCACTAAACGCTGCCTGTGGGGGTTGTTGGCTGATTTATTTGAATGTGTACTATGTGAGAAAAAGAACGAGACTCATTCACATGCATTTTTCCCACTGCAATATATGGTAAAAGATGTTCGAATGGGGTTAGGAAGAAAAATATCGTATGGGTCAATCTATCAAAAGGGGTTATTTGAGAGATGTGGTTGCAAAGAAATCATCGGATATTTAACGAAGAGGCCAGAAATTGGGTGAAGGAGAAGTCTAGTATTGATGCTTCTGAATAGTGTTCGTTAGAGAAATGCTTTTTCTATACCCCATTTGTAATTACTTCAAACTGGAGGTCCTTCTTGTAAACCTCTAGTGGGGTGACAAGGATTTTCGGTATAGTATTTGTAACACTTATCACTATACCAAAAAGTTGCAGTTCCTTTTTTGAGGAAAAAAGAGTTTGGGTGTAAAGGTAAGGACTTTGGATTCTACACATAACACACCTAGGAGTCATCACAAGGTTCAAAATACCTCAACCTCAAGCCACTAACCTGTAAATATCTTGCCGACCTCTCAAGGACAAATTGTTACTTATGTTAGGTAGTAGGCCCCATTTGGAACCTAGAACAATCTGGGTGATTTCTGGTAATAAAAAATGTCAAAGGAATTATGGGTTCTCTCTAAGTCAACCTAAGGTCTTAATGATGTTTGTTTTTATTCTATGATCTGTGAGTTCAACATTGATATGTAAGTTAATAAATTTTAACCGACTGTTTGACTAAGATTTTATCCTTTTCAACATCATATGCCTATTTTGGATAAAGAAGAAATATTGTAGTGGTGAATTCTTAACCTTTGATAAGATTCATGATATGATTCTTTGAATCAGGAATTTTGTTCTGCTGAGGCACTTCTTAGTTCTTTGTTTAGTATTCTAAACTGTACTGTGTTATGCAGAGAAACAGTCACTGGCGCATGCAGACTTTTGTTGGCCATCCTCAGTCTGGTAAAAATGGTTCTGCTTCAGGACCAACGTATCCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCCGCCATGCTTGCAAGCTCACAAAATCCCCTCGATTCCCACACAGGCAGAGATATTATGCAGGACGCTGACATAATAAATAAAGGAGTTTCTCATCCCATGTCTCTAGAAGGAAATATGCATACTTCTATGCGTAGTGACAGTGTTCTTGATCAATCTCTTCACATTCCAATTTCTGATGCACAGACAACAGAGTGTCCTATCCCCAACAATGCATCAAGCCAACCGGAGGAGATAGATATTGAAGGGGGGACAATAAGCGTTTCAAGTCTTTATTCAGAAGGGTCAGTTGTAAGATATTTATTCTGGTTTTGTTTCGAGTATCATGATAGGTTTATGGAGATTCCATAAGACAGAAGTTTTTATCATTGGCCTCGTTATTTCGATTGCAATTATTTACATATCATACATTTCTTTAGAGAAAATCAAATAATTCACTTTTTTTTTTTCAAAACCCCCATACTGTCTCTTCTTGATCCTGATAAGATGGAAAGAGAACTACTTGGTTCCATCTGCTTTTACTTCTTGTTTGGTTAGAAAGTCGTTCTTAATTTCCACCACCCTGATAGTGTACTTTTTAATGAAAGTGTCTATATAGACAAGGTTATGCACTAACTTATTTATAAAGGGCTTTACTAAGATTTAAACATTTATCTTGACTTGACTATATTGCATCTACTGGAAAGATTTTACCAAGTTCATTGGAACGTTAAACTCTGGGGCCTGATTCTTGTAATGACCAGTAGATGTTAAAGCTTCAAGAAAATATTTCTACCTTTTTCTTCCATTATAAATATAGTAATAATATCGATTTGACCTTTAGTAGAACTTGTTCAAACCCCAGCATATAAGATGTCTGAATAGTTGCTTTTGGAGGCGTTCATTTGCATGGTCTCTTCCTAGGATTTGGTAACAGCTCTGGAACTTGGTGCTGAGCAGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGCATCTCCGTTCAGATTGATCTGGGCAAGAGAGCAAATAAAGGGATAGCATTTGGAACGCCTATCTTTAAGGTATTAAGTTGATTATGCAGGCTAAGTTTTATTTTGTTATTTTGTTATTATCATCATTTTTTTTTGGGGAAGGCTAGTTCTATTTGAGCCTTTTCTGATATATTCCTTATGGTAGTAGAAAGCAGAAGAACGGTTAGAGATCAGAATAATATATGAAAATGGAAACTAGAAATTTGATCTGATAACCTTGCTGTGACAAAAATGTCGACATGAAAACAATCATCCATGATGTGGAAAACATAGCACTCAGCACGACCAAGGAAAAAGTTGAATATATACCAGACAAATTTTAAAAAATTTCTGGCGTGGGATTTATTTTCCTCTTCTTCAGTTTTCAGATGAATCTGGTTATTCTGTGTCTCATTTCATAAATATTTATTGGGAGTCACTGGTTCTGTATTTCAATCGCTAACTATATGAAGCTCTTCAATTTCTGACCAGGAAACTGGGAATCCTCCTTCTGGCCACCCAGCAATGGCACATATAGGGGACCTGGGCAGTGGAGACGACTCGGATCAAGCTAAAAAGCGGCTTAGGACA

mRNA sequence

AATCTGGAGGACGAAGAGTACGAGGAGGACGAGTTGGTTGCTAAAAGAGAGGGGCCTTCTTCTACTTCCAATGCTAACAATAGCATCGGAAACAGCAAAGATGCGAAGAACAACGACAAGGCTAGCGCCATACGGTCAAAGCACTCTGTTACGGAGCAGCGCAGACGAAGCAAGATAAATGAGAGATTCCAGATTTTGAGAGAGCTTATACCTCACAGCGATCAAAAGAGAGACACTGCATCATTCTTGTTGGAGGTGATTGAGTATGTCCAGTTTTTACAGGAAAAGGTGCAGAAGTACGAGGGTTCATATCAGAATTGGAGCGGGGAACCCACTAAGTTAATACCATGGAGAAACAGTCACTGGCGCATGCAGACTTTTGTTGGCCATCCTCAGTCTGGTAAAAATGGTTCTGCTTCAGGACCAACGTATCCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCCGCCATGCTTGCAAGCTCACAAAATCCCCTCGATTCCCACACAGGCAGAGATATTATGCAGGACGCTGACATAATAAATAAAGGAGTTTCTCATCCCATGTCTCTAGAAGGAAATATGCATACTTCTATGCGTAGTGACAGTGTTCTTGATCAATCTCTTCACATTCCAATTTCTGATGCACAGACAACAGAGTGTCCTATCCCCAACAATGCATCAAGCCAACCGGAGGAGATAGATATTGAAGGGGGGACAATAAGCGTTTCAAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGCATCTCCGTTCAGATTGATCTGGGCAAGAGAGCAAATAAAGGGATAGCATTTGGAACGCCTATCTTTAAGGAAACTGGGAATCCTCCTTCTGGCCACCCAGCAATGGCACATATAGGGGACCTGGGCAGTGGAGACGACTCGGATCAAGCTAAAAAGCGGCTTAGGACA

Coding sequence (CDS)

AATCTGGAGGACGAAGAGTACGAGGAGGACGAGTTGGTTGCTAAAAGAGAGGGGCCTTCTTCTACTTCCAATGCTAACAATAGCATCGGAAACAGCAAAGATGCGAAGAACAACGACAAGGCTAGCGCCATACGGTCAAAGCACTCTGTTACGGAGCAGCGCAGACGAAGCAAGATAAATGAGAGATTCCAGATTTTGAGAGAGCTTATACCTCACAGCGATCAAAAGAGAGACACTGCATCATTCTTGTTGGAGGTGATTGAGTATGTCCAGTTTTTACAGGAAAAGGTGCAGAAGTACGAGGGTTCATATCAGAATTGGAGCGGGGAACCCACTAAGTTAATACCATGGAGAAACAGTCACTGGCGCATGCAGACTTTTGTTGGCCATCCTCAGTCTGGTAAAAATGGTTCTGCTTCAGGACCAACGTATCCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCCGCCATGCTTGCAAGCTCACAAAATCCCCTCGATTCCCACACAGGCAGAGATATTATGCAGGACGCTGACATAATAAATAAAGGAGTTTCTCATCCCATGTCTCTAGAAGGAAATATGCATACTTCTATGCGTAGTGACAGTGTTCTTGATCAATCTCTTCACATTCCAATTTCTGATGCACAGACAACAGAGTGTCCTATCCCCAACAATGCATCAAGCCAACCGGAGGAGATAGATATTGAAGGGGGGACAATAAGCGTTTCAAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGCATCTCCGTTCAGATTGATCTGGGCAAGAGAGCAAATAAAGGGATAGCATTTGGAACGCCTATCTTTAAGGAAACTGGGAATCCTCCTTCTGGCCACCCAGCAATGGCACATATAGGGGACCTGGGCAGTGGAGACGACTCGGATCAAGCTAAAAAGCGGCTTAGGACA

Protein sequence

NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKINERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDADIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPPSGHPAMAHIGDLGSGDDSDQAKKRLRT

Homology

[Close]

BLAST of MS001035 vs. NCBI nr
Match: XP_022131969.1 (transcription factor BIM2 [Momordica charantia])

HSP 1 Score: 632.9 bits (1631), Expect = 1.6e-177
Identity = 325/327 (99.39%), Postives = 325/327 (99.39%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN
Sbjct: 7   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD
Sbjct: 127 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPI DAQTTECPIPNNASSQPEEIDIEGG
Sbjct: 187 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPICDAQTTECPIPNNASSQPEEIDIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPP 300
           TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFG PIFKETGNPP
Sbjct: 247 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGXPIFKETGNPP 306

Query: 301 SGHPAMAHIGDLGSGDDSDQAKKRLRT 328
           SGHPAMAHIGDLGSGDDSDQAKKRLRT
Sbjct: 307 SGHPAMAHIGDLGSGDDSDQAKKRLRT 333

[Close]

BLAST of MS001035 vs. NCBI nr
Match: XP_038886108.1 (transcription factor BIM2 isoform X1 [Benincasa hispida])

HSP 1 Score: 574.7 bits (1480), Expect = 5.0e-160
Identity = 295/327 (90.21%), Postives = 313/327 (95.72%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYEEDELVAKREGPSSTSNA ++IGNSKDAKNNDKA+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEEDELVAKREGPSSTSNAISNIGNSKDAKNNDKANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRDI+QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V HPMSLEGNMH S+RSD+VLDQSLHIPISDAQTTECPI NNAS+QPEE+ IEGG
Sbjct: 187 ITNK-VPHPMSLEGNMHASIRSDTVLDQSLHIPISDAQTTECPITNNASNQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPP 300
           TISVSS+YSEG +NSL QALQ+TGLDLSQASISVQIDLGKRANKG+ FGTPIFKETGNPP
Sbjct: 247 TISVSSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPP 306

Query: 301 SGHPAMAHIGDLGSGDDSDQAKKRLRT 328
           S HPAMA++GDLGSGDDS+QAKKRLRT
Sbjct: 307 SSHPAMANVGDLGSGDDSEQAKKRLRT 332

[Close]

BLAST of MS001035 vs. NCBI nr
Match: XP_022997211.1 (transcription factor BIM2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 561.6 bits (1446), Expect = 4.4e-156
Identity = 289/328 (88.11%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYE+DELVAKREGPSSTSNAN+SIGNSKDAKNND+A+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEDDELVAKREGPSSTSNANSSIGNSKDAKNNDRANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRD++QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V  PMSLEGN+H S+RSD VLDQSL IPIS  Q TECPI NNASSQPEE+ IEGG
Sbjct: 187 ITNK-VPLPMSLEGNIHASIRSDGVLDQSLQIPISSGQATECPIANNASSQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNP- 300
           TIS+SSLYSEGLLNSLTQALQNTGLDLSQAS+S+Q+DLGKRANKG  FG PIFKETGNP 
Sbjct: 247 TISISSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGFPFGMPIFKETGNPS 306

Query: 301 PSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
            SGHPAMAH+GDLGSGDDS+Q KKRLRT
Sbjct: 307 SSGHPAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of MS001035 vs. NCBI nr
Match: KAG6598649.1 (Transcription factor BIM2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 561.2 bits (1445), Expect = 5.8e-156
Identity = 288/328 (87.80%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYE+DE+VAKREGPSSTSNAN+SIGNSKDAKNND+A+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEDDEMVAKREGPSSTSNANSSIGNSKDAKNNDRANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRD++QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V  PMSLEGN+H S+RSD VLDQSL IPIS  Q TECPI NNASSQPEE+ IEGG
Sbjct: 187 ITNK-VPLPMSLEGNIHASIRSDGVLDQSLQIPISGGQATECPIANNASSQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNP- 300
           TIS+SSLYSEGLLNSLTQALQNTGLDLSQAS+S+Q+DLGKRANKG+ FG PIFKETGNP 
Sbjct: 247 TISISSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGLPFGMPIFKETGNPS 306

Query: 301 PSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
            SGHPAMAH+GDLGSGDDS+Q KKRLRT
Sbjct: 307 SSGHPAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of MS001035 vs. NCBI nr
Match: XP_023546510.1 (transcription factor BIM2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 287/328 (87.50%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYE+DE+VAKREGPSSTSNAN+SIGNSKDAKNND+A+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEDDEMVAKREGPSSTSNANSSIGNSKDAKNNDRANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPT+ GKFDDNNISISPAMLASSQNPLDSH+GRD++QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTFSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V  PMSLEGN+H S+RSD VLDQSL IPIS  Q TECPI NNASSQPEE+ IEGG
Sbjct: 187 ITNK-VPLPMSLEGNIHASIRSDGVLDQSLQIPISGGQATECPIANNASSQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNP- 300
           TIS+SSLYSEGLLNSLTQALQNTGLDLSQAS+S+Q+DLGKRANKG+ FG PIFKETGNP 
Sbjct: 247 TISISSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGLPFGMPIFKETGNPS 306

Query: 301 PSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
            SGHPAMAH+GDLGSGDDS+Q KKRLRT
Sbjct: 307 SSGHPAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of MS001035 vs. ExPASy Swiss-Prot
Match: Q9CAA4 (Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-78
Identity = 170/332 (51.20%), Postives = 222/332 (66.87%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N E+E+Y E++  +KREGPSS    N ++ +++D+K NDKASAIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEEEDYGEEDFNSKREGPSS----NTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILRELIP+S+QKRDTASFLLEVI+YVQ+LQEKVQKYEGSY  WS EPTKL PWRN+
Sbjct: 67  ERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRNN 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSH-----TGRDI 180
           HWR+Q+   HP +  NGS  G  +PGKF+DN ++ +PA++A  Q P++S      TG  I
Sbjct: 127 HWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISI 186

Query: 181 MQDADIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEI 240
               ++ +KG+  P+                 Q +   +   Q  ECP  ++   Q  ++
Sbjct: 187 ESQPELDDKGLP-PL-----------------QPILPMVQGEQANECPATSDGLGQSNDL 246

Query: 241 DIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKE 300
            IEGGTIS+SS YS  LL+SLTQALQN G+DLSQA +SVQIDLGKRAN+G+    P  K 
Sbjct: 247 VIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKN 306

Query: 301 TGNPPSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
               P  +       D    ++S+ + KR++T
Sbjct: 307 ----PLSYDTQGR--DSSVEEESEHSHKRMKT 310

[Close]

BLAST of MS001035 vs. ExPASy Swiss-Prot
Match: Q9LEZ3 (Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 1.0e-38
Identity = 109/285 (38.25%), Postives = 170/285 (59.65%), Query Frame = 0


Query: 3   EDEEYEEDELVAKREGPSSTSNANNSIGNSKDAK---NNDKASAIRSKHSVTEQRRRSKI 62
           ED+  +E++ + K+E  S++ +    +    D +   N+ K +  RSKHS TEQRRRSKI
Sbjct: 233 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 292

Query: 63  NERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRN 122
           N+RFQ+LR+LIP+SDQKRD ASFLLEVIEY+QFLQEK  KY  SYQ W+ EP KL+ W++
Sbjct: 293 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQS 352

Query: 123 SHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDA 182
           ++        + Q    G A  P    K ++   +I  ++LA++Q  +  H         
Sbjct: 353 NN--------NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDHPTTATTS-- 412

Query: 183 DIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEE-IDIE 242
                    P+S++ N   S           H  ++ ++  E P P++ S + EE  ++ 
Sbjct: 413 -------PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVE-PSPSSRSQKEEEDEEVL 472

Query: 243 GGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRAN 284
            G I +SS+YS+GL+ +L +AL+N+G+DL++ASISV+I+L K+++
Sbjct: 473 EGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495

[Close]

BLAST of MS001035 vs. ExPASy Swiss-Prot
Match: Q9FMB6 (Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.6e-34
Identity = 105/288 (36.46%), Postives = 155/288 (53.82%), Query Frame = 0


Query: 42  SAIRSKHSVTEQRRRSKINERFQILRELIP--HSDQKRDTASFLLEVIEYVQFLQEKVQK 101
           ++ RSKHS TEQRRRSKINERFQ L ++IP   +DQKRD ASFLLEVIEY+ FLQEKV  
Sbjct: 32  NSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHM 91

Query: 102 YEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAM 161
           YE S+Q W   PTKLIPWRNSH  +     HPQ  K                + S +  +
Sbjct: 92  YEDSHQMWYQSPTKLIPWRNSHGSVAEENDHPQIVK----------------SFSSNDKV 151

Query: 162 LASSQNPLDSHTGRDIMQDADIINKGVSH-PMSLEGNMHTSMRSDSVLDQSLHIPISDAQ 221
            ASS   LD++   +   D+ +  K   H P+S   +   +  S   +      P +   
Sbjct: 152 AASSGFLLDTYNSVNPDIDSAVSTKIPEHSPVSAVSSYLRTEPSLQFVQHDFWQPKTSCG 211

Query: 222 TTECPIPNNASSQPEEIDIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDL 281
           T  C   N   +  E+      + S+S++ S+ +LN+LT+AL+++G+++S+  ISVQ+ L
Sbjct: 212 TINC-FTNELLTSDEKT-----SASLSTVCSQRVLNTLTEALKSSGVNMSETMISVQLSL 271

Query: 282 GKRANKGIAFGTPIFKETGNPPSGHPAMAHIGDLGSGDDSDQAKKRLR 327
            KR ++  +      ++ GN  +     +        +D D ++KR+R
Sbjct: 272 RKREDREYSVAAFASEDNGNSIADEEGDSPTETRSFCNDIDHSQKRIR 297

[Close]

BLAST of MS001035 vs. ExPASy Swiss-Prot
Match: Q6AT90 (Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 33  KDAKNNDKASAIRSKHSVTEQRRRSKINERFQILRELIPHSDQKRDTASFLLEVIEYVQF 92
           + A  + K S     H+++E+RRR +INE+ + L+ELIP+ + K D AS L E IEY++ 
Sbjct: 325 RSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCN-KIDKASMLEEAIEYLKT 384

Query: 93  LQEKVQKYE---GSYQNWSGEPTKLIPWRNSHWRMQTFVG 130
           LQ +VQ      G +      P      ++ H +MQ   G
Sbjct: 385 LQLQVQMMSMGTGMFVPPMMLPAAAAAMQHHHMQMQQMAG 423

[Close]

BLAST of MS001035 vs. ExPASy Swiss-Prot
Match: Q8W2F3 (Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.2e-04
Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 26  NNSIGN-SKDAKNNDKASAIRSKHSVTEQRRRSKINERFQILRELIPHSDQKRDTASFLL 85
           +++IGN S     +++ S     H+++E+RRR +INER + L+ELIPH   K D AS L 
Sbjct: 239 SDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHC-SKTDKASILD 298

Query: 86  EVIEYVQFLQEKVQ 99
           E I+Y++ LQ ++Q
Sbjct: 299 EAIDYLKSLQLQLQ 311

[Close]

BLAST of MS001035 vs. ExPASy TrEMBL
Match: A0A6J1BRR4 (transcription factor BIM2 OS=Momordica charantia OX=3673 GN=LOC111004954 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 7.6e-178
Identity = 325/327 (99.39%), Postives = 325/327 (99.39%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN
Sbjct: 7   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD
Sbjct: 127 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPI DAQTTECPIPNNASSQPEEIDIEGG
Sbjct: 187 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPICDAQTTECPIPNNASSQPEEIDIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPP 300
           TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFG PIFKETGNPP
Sbjct: 247 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGXPIFKETGNPP 306

Query: 301 SGHPAMAHIGDLGSGDDSDQAKKRLRT 328
           SGHPAMAHIGDLGSGDDSDQAKKRLRT
Sbjct: 307 SGHPAMAHIGDLGSGDDSDQAKKRLRT 333

[Close]

BLAST of MS001035 vs. ExPASy TrEMBL
Match: A0A6J1K6W4 (transcription factor BIM2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492183 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.1e-156
Identity = 289/328 (88.11%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYE+DELVAKREGPSSTSNAN+SIGNSKDAKNND+A+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEDDELVAKREGPSSTSNANSSIGNSKDAKNNDRANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRD++QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V  PMSLEGN+H S+RSD VLDQSL IPIS  Q TECPI NNASSQPEE+ IEGG
Sbjct: 187 ITNK-VPLPMSLEGNIHASIRSDGVLDQSLQIPISSGQATECPIANNASSQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNP- 300
           TIS+SSLYSEGLLNSLTQALQNTGLDLSQAS+S+Q+DLGKRANKG  FG PIFKETGNP 
Sbjct: 247 TISISSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGFPFGMPIFKETGNPS 306

Query: 301 PSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
            SGHPAMAH+GDLGSGDDS+Q KKRLRT
Sbjct: 307 SSGHPAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of MS001035 vs. ExPASy TrEMBL
Match: A0A0A0KD98 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G373190 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.4e-155
Identity = 287/327 (87.77%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N ED+EY+EDELV KREGPSSTSNA +SIGNSKDAKNNDKA+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDDEYDEDELVGKREGPSSTSNAISSIGNSKDAKNNDKANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGH QS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRDI+Q+AD
Sbjct: 127 HWRMQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQEAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V HPMSLEGNMH S+RSD+VLD SLHIPISD Q TECPI NNAS+QPEE+ IEGG
Sbjct: 187 ITNK-VPHPMSLEGNMHASIRSDTVLDHSLHIPISDPQATECPITNNASNQPEEMGIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPP 300
           TISVSS+YSEG +NSL QALQ+TGLDLSQASISVQIDLGKRANKG+ FGTPIFKETGNP 
Sbjct: 247 TISVSSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPS 306

Query: 301 SGHPAMAHIGDLGSGDDSDQAKKRLRT 328
           S HPAMA++GDLGSGDDS+QAKKRLRT
Sbjct: 307 SNHPAMANVGDLGSGDDSEQAKKRLRT 332

[Close]

BLAST of MS001035 vs. ExPASy TrEMBL
Match: A0A6J1HCP5 (transcription factor BIM2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462422 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.4e-155
Identity = 287/328 (87.50%), Postives = 307/328 (93.60%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N EDEEYE+DE+VAKREGPSSTSNAN+SIGNSKDAKNND+A+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDEEYEDDEMVAKREGPSSTSNANSSIGNSKDAKNNDRANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRN+
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNT 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGHPQS KNGSASGPTY GKFDDNNISISPAMLASSQNPLDSH+GRD++QDAD
Sbjct: 127 HWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDVLQDAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V  PMSLEGN+H S+RSD VLDQSL IPIS  Q TECPI NNASSQPEE+ IEGG
Sbjct: 187 ITNK-VPLPMSLEGNIHASIRSDGVLDQSLQIPISGGQATECPIANNASSQPEEMAIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNP- 300
           TIS+SSLYSEGLLNSLTQALQNTGLDLSQAS+S+Q+DLGKRANKG  FG PIFKETGNP 
Sbjct: 247 TISISSLYSEGLLNSLTQALQNTGLDLSQASVSIQVDLGKRANKGPPFGMPIFKETGNPS 306

Query: 301 PSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
            SGHPAMAH+GDLGSGDDS+Q KKRLRT
Sbjct: 307 SSGHPAMAHVGDLGSGDDSEQVKKRLRT 333

[Close]

BLAST of MS001035 vs. ExPASy TrEMBL
Match: A0A1S3BCN3 (LOW QUALITY PROTEIN: transcription factor BIM2 OS=Cucumis melo OX=3656 GN=LOC103488447 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.2e-153
Identity = 285/327 (87.16%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N ED+EY+EDELV KREGPSSTSNA +SIGNSKDAKNNDKA+AIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEDDEYDEDELVGKREGPSSTSNAISSIGNSKDAKNNDKANAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILR+LIPHSDQKRDTASFLLEVIEYVQ+LQEKVQKYEGSYQNWSGEPTKLIPWRNS
Sbjct: 67  ERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNS 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDAD 180
           HWRMQTFVGH QS KNGSASGPTY GKFDDNNISISPA+LASSQNPL+SH+GRDI+Q+AD
Sbjct: 127 HWRMQTFVGHQQSVKNGSASGPTYSGKFDDNNISISPAILASSQNPLESHSGRDILQEAD 186

Query: 181 IINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEIDIEGG 240
           I NK V HPMSLEGNMH S+RSD  LDQSLHIPISDAQ TECPI NNAS+QPEE+ IEGG
Sbjct: 187 ITNK-VPHPMSLEGNMHASIRSD--LDQSLHIPISDAQATECPITNNASNQPEEMGIEGG 246

Query: 241 TISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKETGNPP 300
           TISVSS+YSEG +NSL QALQ+TGLDLS+ASISVQIDLGKRANKG+ FGTPIFKETGNP 
Sbjct: 247 TISVSSVYSEGFMNSLAQALQSTGLDLSEASISVQIDLGKRANKGMPFGTPIFKETGNPS 306

Query: 301 SGHPAMAHIGDLGSGDDSDQAKKRLRT 328
           S HPAMA++GDLGSGDDS+QAKKRLRT
Sbjct: 307 SNHPAMANVGDLGSGDDSEQAKKRLRT 330

[Close]

BLAST of MS001035 vs. TAIR 10
Match: AT1G69010.1 (BES1-interacting Myc-like protein 2 )

HSP 1 Score: 294.7 bits (753), Expect = 9.4e-80
Identity = 170/332 (51.20%), Postives = 222/332 (66.87%), Query Frame = 0


Query: 1   NLEDEEYEEDELVAKREGPSSTSNANNSIGNSKDAKNNDKASAIRSKHSVTEQRRRSKIN 60
           N E+E+Y E++  +KREGPSS    N ++ +++D+K NDKASAIRSKHSVTEQRRRSKIN
Sbjct: 7   NQEEEDYGEEDFNSKREGPSS----NTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKIN 66

Query: 61  ERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRNS 120
           ERFQILRELIP+S+QKRDTASFLLEVI+YVQ+LQEKVQKYEGSY  WS EPTKL PWRN+
Sbjct: 67  ERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLTPWRNN 126

Query: 121 HWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSH-----TGRDI 180
           HWR+Q+   HP +  NGS  G  +PGKF+DN ++ +PA++A  Q P++S      TG  I
Sbjct: 127 HWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISI 186

Query: 181 MQDADIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEEI 240
               ++ +KG+  P+                 Q +   +   Q  ECP  ++   Q  ++
Sbjct: 187 ESQPELDDKGLP-PL-----------------QPILPMVQGEQANECPATSDGLGQSNDL 246

Query: 241 DIEGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKGIAFGTPIFKE 300
            IEGGTIS+SS YS  LL+SLTQALQN G+DLSQA +SVQIDLGKRAN+G+    P  K 
Sbjct: 247 VIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKN 306

Query: 301 TGNPPSGHPAMAHIGDLGSGDDSDQAKKRLRT 328
               P  +       D    ++S+ + KR++T
Sbjct: 307 ----PLSYDTQGR--DSSVEEESEHSHKRMKT 310

[Close]

BLAST of MS001035 vs. TAIR 10
Match: AT5G08130.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-40
Identity = 107/285 (37.54%), Postives = 168/285 (58.95%), Query Frame = 0


Query: 3   EDEEYEEDELVAKREGPSSTSNANNSIGNSKDAK---NNDKASAIRSKHSVTEQRRRSKI 62
           ED+  +E++ + K+E  S++ +    +    D +   N+ K +  RSKHS TEQRRRSKI
Sbjct: 113 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 172

Query: 63  NERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRN 122
           N+RFQ+LR+LIP+SDQKRD ASFLLEVIEY+QFLQEK  KY  SYQ W+ EP KL+ W N
Sbjct: 173 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWSN 232

Query: 123 SHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDA 182
           ++ ++                G  +  K ++   +I  ++LA++Q  +  H         
Sbjct: 233 NNQQL-------------VPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-- 292

Query: 183 DIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEE-IDIE 242
                    P+S++ N   S           H  ++ ++  E P P++ S + EE  ++ 
Sbjct: 293 -------PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVE-PSPSSRSQKEEEDEEVL 352

Query: 243 GGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRAN 284
            G I +SS+YS+GL+ +L +AL+N+G+DL++ASISV+I+L K+++
Sbjct: 353 EGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 374

[Close]

BLAST of MS001035 vs. TAIR 10
Match: AT5G08130.5 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-40
Identity = 107/285 (37.54%), Postives = 168/285 (58.95%), Query Frame = 0


Query: 3   EDEEYEEDELVAKREGPSSTSNANNSIGNSKDAK---NNDKASAIRSKHSVTEQRRRSKI 62
           ED+  +E++ + K+E  S++ +    +    D +   N+ K +  RSKHS TEQRRRSKI
Sbjct: 237 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 296

Query: 63  NERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRN 122
           N+RFQ+LR+LIP+SDQKRD ASFLLEVIEY+QFLQEK  KY  SYQ W+ EP KL+ W N
Sbjct: 297 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWSN 356

Query: 123 SHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDA 182
           ++ ++                G  +  K ++   +I  ++LA++Q  +  H         
Sbjct: 357 NNQQL-------------VPEGVAFAPKLEEEKNNIPVSVLATAQGVVIDHPTTATTS-- 416

Query: 183 DIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEE-IDIE 242
                    P+S++ N   S           H  ++ ++  E P P++ S + EE  ++ 
Sbjct: 417 -------PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVE-PSPSSRSQKEEEDEEVL 476

Query: 243 GGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRAN 284
            G I +SS+YS+GL+ +L +AL+N+G+DL++ASISV+I+L K+++
Sbjct: 477 EGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 498

[Close]

BLAST of MS001035 vs. TAIR 10
Match: AT5G08130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 7.3e-40
Identity = 109/285 (38.25%), Postives = 170/285 (59.65%), Query Frame = 0


Query: 3   EDEEYEEDELVAKREGPSSTSNANNSIGNSKDAK---NNDKASAIRSKHSVTEQRRRSKI 62
           ED+  +E++ + K+E  S++ +    +    D +   N+ K +  RSKHS TEQRRRSKI
Sbjct: 113 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 172

Query: 63  NERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRN 122
           N+RFQ+LR+LIP+SDQKRD ASFLLEVIEY+QFLQEK  KY  SYQ W+ EP KL+ W++
Sbjct: 173 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQS 232

Query: 123 SHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDA 182
           ++        + Q    G A  P    K ++   +I  ++LA++Q  +  H         
Sbjct: 233 NN--------NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDHPTTATTS-- 292

Query: 183 DIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEE-IDIE 242
                    P+S++ N   S           H  ++ ++  E P P++ S + EE  ++ 
Sbjct: 293 -------PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVE-PSPSSRSQKEEEDEEVL 352

Query: 243 GGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRAN 284
            G I +SS+YS+GL+ +L +AL+N+G+DL++ASISV+I+L K+++
Sbjct: 353 EGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 375

[Close]

BLAST of MS001035 vs. TAIR 10
Match: AT5G08130.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 7.3e-40
Identity = 109/285 (38.25%), Postives = 170/285 (59.65%), Query Frame = 0


Query: 3   EDEEYEEDELVAKREGPSSTSNANNSIGNSKDAK---NNDKASAIRSKHSVTEQRRRSKI 62
           ED+  +E++ + K+E  S++ +    +    D +   N+ K +  RSKHS TEQRRRSKI
Sbjct: 233 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 292

Query: 63  NERFQILRELIPHSDQKRDTASFLLEVIEYVQFLQEKVQKYEGSYQNWSGEPTKLIPWRN 122
           N+RFQ+LR+LIP+SDQKRD ASFLLEVIEY+QFLQEK  KY  SYQ W+ EP KL+ W++
Sbjct: 293 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQS 352

Query: 123 SHWRMQTFVGHPQSGKNGSASGPTYPGKFDDNNISISPAMLASSQNPLDSHTGRDIMQDA 182
           ++        + Q    G A  P    K ++   +I  ++LA++Q  +  H         
Sbjct: 353 NN--------NQQLVPEGVAFAP----KLEEEKNNIPVSVLATAQGVVIDHPTTATTS-- 412

Query: 183 DIINKGVSHPMSLEGNMHTSMRSDSVLDQSLHIPISDAQTTECPIPNNASSQPEE-IDIE 242
                    P+S++ N   S           H  ++ ++  E P P++ S + EE  ++ 
Sbjct: 413 -------PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVE-PSPSSRSQKEEEDEEVL 472

Query: 243 GGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRAN 284
            G I +SS+YS+GL+ +L +AL+N+G+DL++ASISV+I+L K+++
Sbjct: 473 EGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSS 495

The following BLAST results are available for this feature:

BLAST of MS001035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131969.1	1.6e-177	99.39	transcription factor BIM2 [Momordica charantia]	[more]
XP_038886108.1	5.0e-160	90.21	transcription factor BIM2 isoform X1 [Benincasa hispida]	[more]
XP_022997211.1	4.4e-156	88.11	transcription factor BIM2 isoform X1 [Cucurbita maxima]	[more]
KAG6598649.1	5.8e-156	87.80	Transcription factor BIM2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546510.1	1.7e-155	87.50	transcription factor BIM2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAA4	1.3e-78	51.20	Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1	[more]
Q9LEZ3	1.0e-38	38.25	Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2	[more]
Q9FMB6	7.6e-34	36.46	Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1	[more]
Q6AT90	1.3e-04	35.00	Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV...	[more]
Q8W2F3	2.2e-04	41.89	Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1	[more]

BLAST of MS001035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRR4	7.6e-178	99.39	transcription factor BIM2 OS=Momordica charantia OX=3673 GN=LOC111004954 PE=4 SV...	[more]
A0A6J1K6W4	2.1e-156	88.11	transcription factor BIM2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492183...	[more]
A0A0A0KD98	1.4e-155	87.77	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G373190 PE=4 S...	[more]
A0A6J1HCP5	2.4e-155	87.50	transcription factor BIM2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114624...	[more]
A0A1S3BCN3	2.2e-153	87.16	LOW QUALITY PROTEIN: transcription factor BIM2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of MS001035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69010.1	9.4e-80	51.20	BES1-interacting Myc-like protein 2	[more]
AT5G08130.3	2.5e-40	37.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.5	2.5e-40	37.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.1	7.3e-40	38.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.2	7.3e-40	38.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..37
None	No IPR available	PANTHER	PTHR46412:SF6	TRANSCRIPTION FACTOR BIM2	coord: 3..327
None	No IPR available	CDD	cd11453	bHLH_AtBIM_like	coord: 42..118 e-value: 2.62155E-48 score: 154.938
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 49..99 e-value: 6.7E-12 score: 55.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 45..94 e-value: 5.8E-13 score: 48.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 43..93 score: 16.107079
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 41..113 e-value: 2.8E-25 score: 90.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 41..113
IPR044295	Transcription factor BIM1/2/3	PANTHER	PTHR46412	BES1-INTERACTING MYC-LIKE PROTEIN	coord: 3..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001035.1	MS001035.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity