MS001033 (gene) Bitter gourd (TR) v1

Overview


Name	MS001033
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	18S pre-ribosomal assembly protein gar2-related
Location	scaffold36: 980736 .. 982374 (+)
RNA-Seq Expression	MS001033
Synteny	MS001033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATCTGCAGAAAGTGACCATCCAGTTTACCATTCAATTACCAGCCCAAAGTGTGTTCCAAAACTACTTGAATGCAACTACGATACTCTTGAGTCACAAAACCAGGTCATGAGTAAAAATCCAATTGGACTCTCATGCCCAGAGAAGATAAACCAGGAGGATGCCATTCAATCTTCATACTCTACTGGTCATGAGAATAGTTGCACGGGTACTAAAATTAGCTGCTCGTCTGTAGATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTGTGGCACCATCCAGTAAGAAACCCTCAGACTCGTACGTGGACAAAAGTGTCATGGAATTTCAAATGCCAAAAACGATAGTTTGTGACCAAGAAATTGATGTCAATGATGTGAAGGACATCTGCATTGACGATGGGTTGTCTTCTCTGGAAAATTTCTTCTTTAGGAGTACGGATGAGAAGTCAATCTTCAAAATCCTTTCTCTGGAGGAAGATCCAAATGAGAGTCCTATAAAAGAACCAGAGAATTCTTCTGACGTCTCCAAGTCAATAGCAGATGATAAAAAAATTTCTTTAGAAGACCACTTTGCAAGGGATTGGACTACTCACGATGATGCTAAGGATTTGACACAGATTGAGGAAGCACAACTCGATCTGAGAGAGGCAAAAGTTTCGTTGCAAAAGCTAGTTAGAAAAAGTTGCTATTCTGAGACTGTATACAACATTGGTGTCCAGGTATGCATATTTCTGGCCGAGTTATTGAGCATGTTCCTCTTGCACACCACGTTTGTTTTATTTTAGCCTGCATATATTCAAGGAAGTTCATTCTGAATGATAACTAATGCAATGAATAGTGGAATTCCAGTCTGTACTTTCAGGACAATGATGAAGGATAAATTAAAAAAAGGACAGATTGGTGAAGTAATTTTAGACTTGATTTCTTTCTTTTGACTGCAGATTTCTGGTGAAAAAGCAAACTTGGATGACTCTGCTTCGGTTTCCAAATCTGTTGCTCTGGGTTCTTCGGCAGAATCACCAAATGATAACAATCCAACATATCCTTTAGCTCATAATCATGAATTTGAGAATGGAAGTATTACATTGAATTTCAATTCAGTCTCTCCTGTGGTCAATGGTGGAGAAGAAAATCATGGAAATACCATCTTAAACTATCCAGCACCCTTGGCAAGTAGTTCAGTGACACAGGAGTGTCGCCAAAGTAGTGGTTCTGCAGTTGAAACCCAAGTTTCAACCAATCTGGAATTTAGAACTTCAGATGCTCGATTAGTTTCAAGTCAGACGCAGCATGACATTGGCGAGTCTAGCTTCTCTGCTGTAGATCCGTTAGCCAGTCTTGTTACTTACTCGGGCCCAATAGCTTATTCTGGAAGTATCTCCCTCCGATCAGAAAGTAGTGCGGCAAGCACTCGTTCTTTTGCCTTTCCCATGTAAGTTACAATCTTAATTCCATCTCTTAAGCTTCTTCTTTATATATTTTTTTCTAAATTGTAATGGGTAATTATTTCGTCACCGGGTTTACAGATTACAGTCTGAATGGAATAGCAGTCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTC

mRNA sequence

GCATCTGCAGAAAGTGACCATCCAGTTTACCATTCAATTACCAGCCCAAAGTGTGTTCCAAAACTACTTGAATGCAACTACGATACTCTTGAGTCACAAAACCAGGTCATGAGTAAAAATCCAATTGGACTCTCATGCCCAGAGAAGATAAACCAGGAGGATGCCATTCAATCTTCATACTCTACTGGTCATGAGAATAGTTGCACGGGTACTAAAATTAGCTGCTCGTCTGTAGATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTGTGGCACCATCCAGTAAGAAACCCTCAGACTCGTACGTGGACAAAAGTGTCATGGAATTTCAAATGCCAAAAACGATAGTTTGTGACCAAGAAATTGATGTCAATGATGTGAAGGACATCTGCATTGACGATGGGTTGTCTTCTCTGGAAAATTTCTTCTTTAGGAGTACGGATGAGAAGTCAATCTTCAAAATCCTTTCTCTGGAGGAAGATCCAAATGAGAGTCCTATAAAAGAACCAGAGAATTCTTCTGACGTCTCCAAGTCAATAGCAGATGATAAAAAAATTTCTTTAGAAGACCACTTTGCAAGGGATTGGACTACTCACGATGATGCTAAGGATTTGACACAGATTGAGGAAGCACAACTCGATCTGAGAGAGGCAAAAGTTTCGTTGCAAAAGCTAGTTAGAAAAAGTTGCTATTCTGAGACTGTATACAACATTGGTGTCCAGATTTCTGGTGAAAAAGCAAACTTGGATGACTCTGCTTCGGTTTCCAAATCTGTTGCTCTGGGTTCTTCGGCAGAATCACCAAATGATAACAATCCAACATATCCTTTAGCTCATAATCATGAATTTGAGAATGGAAGTATTACATTGAATTTCAATTCAGTCTCTCCTGTGGTCAATGGTGGAGAAGAAAATCATGGAAATACCATCTTAAACTATCCAGCACCCTTGGCAAGTAGTTCAGTGACACAGGAGTGTCGCCAAAGTAGTGGTTCTGCAGTTGAAACCCAAGTTTCAACCAATCTGGAATTTAGAACTTCAGATGCTCGATTAGTTTCAAGTCAGACGCAGCATGACATTGGCGAGTCTAGCTTCTCTGCTGTAGATCCGTTAGCCAGTCTTGTTACTTACTCGGGCCCAATAGCTTATTCTGGAAGTATCTCCCTCCGATCAGAAAGTAGTGCGGCAAGCACTCGTTCTTTTGCCTTTCCCATATTACAGTCTGAATGGAATAGCAGTCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTC

Coding sequence (CDS)

GCATCTGCAGAAAGTGACCATCCAGTTTACCATTCAATTACCAGCCCAAAGTGTGTTCCAAAACTACTTGAATGCAACTACGATACTCTTGAGTCACAAAACCAGGTCATGAGTAAAAATCCAATTGGACTCTCATGCCCAGAGAAGATAAACCAGGAGGATGCCATTCAATCTTCATACTCTACTGGTCATGAGAATAGTTGCACGGGTACTAAAATTAGCTGCTCGTCTGTAGATGGTTTTGATGATAATGCTGATGGTATTAGTGCATTTGTGGCACCATCCAGTAAGAAACCCTCAGACTCGTACGTGGACAAAAGTGTCATGGAATTTCAAATGCCAAAAACGATAGTTTGTGACCAAGAAATTGATGTCAATGATGTGAAGGACATCTGCATTGACGATGGGTTGTCTTCTCTGGAAAATTTCTTCTTTAGGAGTACGGATGAGAAGTCAATCTTCAAAATCCTTTCTCTGGAGGAAGATCCAAATGAGAGTCCTATAAAAGAACCAGAGAATTCTTCTGACGTCTCCAAGTCAATAGCAGATGATAAAAAAATTTCTTTAGAAGACCACTTTGCAAGGGATTGGACTACTCACGATGATGCTAAGGATTTGACACAGATTGAGGAAGCACAACTCGATCTGAGAGAGGCAAAAGTTTCGTTGCAAAAGCTAGTTAGAAAAAGTTGCTATTCTGAGACTGTATACAACATTGGTGTCCAGATTTCTGGTGAAAAAGCAAACTTGGATGACTCTGCTTCGGTTTCCAAATCTGTTGCTCTGGGTTCTTCGGCAGAATCACCAAATGATAACAATCCAACATATCCTTTAGCTCATAATCATGAATTTGAGAATGGAAGTATTACATTGAATTTCAATTCAGTCTCTCCTGTGGTCAATGGTGGAGAAGAAAATCATGGAAATACCATCTTAAACTATCCAGCACCCTTGGCAAGTAGTTCAGTGACACAGGAGTGTCGCCAAAGTAGTGGTTCTGCAGTTGAAACCCAAGTTTCAACCAATCTGGAATTTAGAACTTCAGATGCTCGATTAGTTTCAAGTCAGACGCAGCATGACATTGGCGAGTCTAGCTTCTCTGCTGTAGATCCGTTAGCCAGTCTTGTTACTTACTCGGGCCCAATAGCTTATTCTGGAAGTATCTCCCTCCGATCAGAAAGTAGTGCGGCAAGCACTCGTTCTTTTGCCTTTCCCATATTACAGTCTGAATGGAATAGCAGTCCGGTTAAAATGGTAAAAGCTGAACGGAGGCATTACCGGAAGTACAGAGGTTGGAGGGAGGGCCTTCTATGTTGCAGATTC

Protein sequence

ASAESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTGHENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIADDKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQISGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

Homology

[Close]

BLAST of MS001033 vs. NCBI nr
Match: XP_022132338.1 (uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132339.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132340.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132341.1 uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132342.1 uncharacterized protein LOC111005214 [Momordica charantia])

HSP 1 Score: 845.9 bits (2184), Expect = 1.6e-241
Identity = 436/438 (99.54%), Postives = 437/438 (99.77%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG
Sbjct: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
           HENSCTGTK SCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI
Sbjct: 64  HENSCTGTKXSCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD
Sbjct: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSET+YNIGVQI
Sbjct: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETLYNIGVQI 243

Query: 244 SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG 303
           SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG
Sbjct: 244 SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG 303

Query: 304 EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE 363
           EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE
Sbjct: 304 EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE 363

Query: 364 SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER 423
           SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 364 SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER 423

Query: 424 RHYRKYRGWREGLLCCRF 442
           RHYRKYRGWREGLLCCRF
Sbjct: 424 RHYRKYRGWREGLLCCRF 441

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BLAST of MS001033 vs. NCBI nr
Match: XP_038886032.1 (uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886033.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886034.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886035.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886036.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886037.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886038.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886039.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886040.1 uncharacterized protein LOC120076323 [Benincasa hispida])

HSP 1 Score: 599.4 bits (1544), Expect = 2.6e-167
Identity = 320/437 (73.23%), Postives = 361/437 (82.61%), Query Frame = 0


Query: 13  ITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTGHENSCTGTK 72
           +TSP C P+ LECNY + E Q +VMS NPIGLSC EKINQED IQSSYS    NSCT TK
Sbjct: 1   MTSPNCAPESLECNYSSSELQRRVMSNNPIGLSCQEKINQEDVIQSSYSACEGNSCTTTK 60

Query: 73  ISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEIDVNDVKDIC 132
           I+CSSVD FD+NADGI AF APSS KPS SYVDKSV E Q+ KTIVCDQEI+VNDVKDIC
Sbjct: 61  INCSSVDVFDNNADGIGAFEAPSSMKPSFSYVDKSVTECQVSKTIVCDQEINVNDVKDIC 120

Query: 133 IDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIADDKKISLEDH 192
           ID+G+SSL+NFFF+ T+EKSI KI+ LEED NE  IKE ENSS+VSK IADD K+ LEDH
Sbjct: 121 IDEGVSSLDNFFFKCTEEKSISKIMPLEEDQNEGSIKEKENSSEVSKFIADDHKVYLEDH 180

Query: 193 FARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQISGEKANLDD 252
           FA +WTTHDDAKDLTQIEE + +L E KV +QKLV++S  SE++ NI VQISGEK N +D
Sbjct: 181 FAMEWTTHDDAKDLTQIEEEKFNLSEPKVLMQKLVKRSYSSESLDNIDVQISGEKVNSED 240

Query: 253 SASVSKSV-------ALGSSAESPNDNN-PTYPLAHNHEFENGSITLNFNSVSPVVNGGE 312
            +  SKSV       ALG++A+ PNDNN PT+P    +E ENGSITLNFNS+SPV NGGE
Sbjct: 241 PSLASKSVESCNGTPALGAAAKPPNDNNIPTHPSGCTNESENGSITLNFNSISPVANGGE 300

Query: 313 ENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGES 372
           E+HGN  LNYPAP+ SS+ TQEC + S S + TQVSTNLE RTSD+RLVS+Q+ HDIGES
Sbjct: 301 EHHGNPNLNYPAPMTSSAGTQECHERSDSVIGTQVSTNLEHRTSDSRLVSNQSLHDIGES 360

Query: 373 SFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAERR 432
           SFSAVDPLASLVTYSGPIAYSGSISLRSESS  STRSFAFPILQSEWNSSPVKMVKAERR
Sbjct: 361 SFSAVDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERR 420

Query: 433 HYRKYRGWREGLLCCRF 442
           HYRKYRGWREGLLCC+F
Sbjct: 421 HYRKYRGWREGLLCCKF 437

[Close]

BLAST of MS001033 vs. NCBI nr
Match: XP_011657412.1 (uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657413.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743659.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743660.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743661.1 uncharacterized protein LOC101217989 [Cucumis sativus] >KAE8647259.1 hypothetical protein Csa_018252 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 8.3e-150
Identity = 299/446 (67.04%), Postives = 345/446 (77.35%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           +SD   YHS+TSP   P+ LECNY +   Q++VM+ NP GLS  +KINQE+ +QSS+S+ 
Sbjct: 4   DSDSSFYHSMTSPNDAPESLECNYSSTVLQHRVMTNNPTGLSFQQKINQENVVQSSHSSC 63

Query: 64  HENSCTGTKISCSSVDGFDD-NADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQE 123
             NSC  TKI+ SS D FDD NA+GISAF A S+ KPS SYVDKSVME QM KTIVCDQE
Sbjct: 64  DGNSCMITKINRSSTDVFDDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQE 123

Query: 124 IDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIA 183
           ++VNDVKDICIDDG++SLENFFF+ST EKSI KI  LEED NE  IKE E SS+VSK IA
Sbjct: 124 VNVNDVKDICIDDGVASLENFFFKSTAEKSISKISPLEEDRNEGSIKEKETSSEVSKFIA 183

Query: 184 DDKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQ 243
           DD+K+SLEDHFA DWTTH+DAKDLTQIEE +L+L E ++ +QKLV++S  SE++  IG+Q
Sbjct: 184 DDRKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPELLMQKLVKRSYSSESLDKIGLQ 243

Query: 244 ISGEKANLDDSASVSKSV-------ALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNS 303
           ISGEK NL+D +S SKSV       AL S+AE P DN P +P  +N EFENGSI L FNS
Sbjct: 244 ISGEKTNLEDPSSASKSVDSCNDTPALDSAAEPPKDNIPAHPSGYNDEFENGSIALTFNS 303

Query: 304 VSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSS 363
           +SPV NGGEE                   QEC   S S + TQV TNLE+RTSD+RL+SS
Sbjct: 304 ISPVANGGEER------------------QECCGRSDSVIGTQVLTNLEYRTSDSRLLSS 363

Query: 364 QTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSP 423
           Q  HDIGESSFSAVDPLASLVTYSGP+AYSGSISLRSESS  STRSFAFPILQSEWNSSP
Sbjct: 364 QNMHDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQSEWNSSP 423

Query: 424 VKMVKAERRHYRKYRGWREGLLCCRF 442
           VKMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 424 VKMVKAERRHYRKYRGWREGLLCCKF 431

[Close]

BLAST of MS001033 vs. NCBI nr
Match: KAG6585259.1 (hypothetical protein SDJN03_17992, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541.2 bits (1393), Expect = 8.3e-150
Identity = 302/446 (67.71%), Postives = 350/446 (78.48%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESD P Y S+TS  CVP+ +ECNY+T E Q+Q++S +PIGL C EKIN EDAIQS  STG
Sbjct: 4   ESDPPFYSSMTSSNCVPESIECNYNT-ELQHQIVSIDPIGLLCREKINHEDAIQSPSSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
             NSC  TKI+ SSVD FDDNA+GI+AF++ S KK SDSYVDKSVME QM K IVCD+EI
Sbjct: 64  GGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           +VNDVKDICID+G+ SL NF FRSTDEKS +K L L +  NE  IKE +NSS+V +SIAD
Sbjct: 124 NVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           +KKISLEDHFA DW+TH+DAKDL QIEEA+L+  E +V +QKLVR+S  SE++ N+G+QI
Sbjct: 184 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDNLGIQI 243

Query: 244 SGEKANLDDSASVSKSV-------ALGSSAESPNDNNPT-YPLAHNHEFENGSITLNFNS 303
           S EKA  +D AS  KSV       A G+ AESPN+N PT +P AHN+EFE GS TLN NS
Sbjct: 244 SSEKAKSEDPASAFKSVESCNDNSASGTDAESPNENIPTQHPSAHNNEFEKGSTTLNLNS 303

Query: 304 VSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSS 363
           +SP+ N  EE+HGN   +YP P+ SS+ TQEC  S+ SA  TQVST         RL+SS
Sbjct: 304 ISPMANAEEEHHGNVNSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------GRLISS 363

Query: 364 QTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSP 423
           QT HD GESSFSA+DPLASLVTYSGPIAYSGSISLRSESS  STRSFAFPILQSEWNSSP
Sbjct: 364 QTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSP 423

Query: 424 VKMVKAERRHYRKYRGWREGLLCCRF 442
           VKMVKAERRHYRKYRGWREGLLCCRF
Sbjct: 424 VKMVKAERRHYRKYRGWREGLLCCRF 438

[Close]

BLAST of MS001033 vs. NCBI nr
Match: XP_022951209.1 (uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_022951210.1 uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_022951211.1 uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata])

HSP 1 Score: 539.3 bits (1388), Expect = 3.2e-149
Identity = 304/447 (68.01%), Postives = 353/447 (78.97%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESD P Y S+TS  CVP+ +ECNY+T E Q+Q++S +PIGL C EKIN EDAIQS  STG
Sbjct: 4   ESDLPFYSSMTSSNCVPESIECNYNT-ELQHQIVSIDPIGLLCREKINHEDAIQSPSSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
             NSC  TKI+ SSVD FDDNA+GI+AF++ S KK SDSYVDKSVME QM   IVCD+EI
Sbjct: 64  GGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           +VNDVKDICID+G+ SL NF FRSTDEKS +K L L +  NE  IKE +NSS+V +SIAD
Sbjct: 124 NVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           +KKISLEDHFA DW+TH+DAKDL QIEEA+L+  E +V +QKLVR+S  SE++ ++G+QI
Sbjct: 184 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 243

Query: 244 SGEKANLDDSASVSKSV-------ALGSSAESPNDNNPT-YPLAHNHEFENGSITLNFNS 303
           S EKAN +D AS  KSV       ALG+ AESPN+N PT  P AHN+EFE GS TLN NS
Sbjct: 244 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 303

Query: 304 VSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSS 363
           +SP+VNG EE+HGN   +YP P+ SS+ TQEC  S+ SA  TQVST        +RL+SS
Sbjct: 304 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SRLISS 363

Query: 364 QTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPIL-QSEWNSS 423
           QT HD GESSFSA+DPLASLVTYSGPIAYSGSISLRSESS  STRSFAFPIL QSEWNSS
Sbjct: 364 QTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSS 423

Query: 424 PVKMVKAERRHYRKYRGWREGLLCCRF 442
           PVKMVKAERRHYRKYRGWREGLLCCRF
Sbjct: 424 PVKMVKAERRHYRKYRGWREGLLCCRF 439

[Close]

BLAST of MS001033 vs. ExPASy TrEMBL
Match: A0A6J1BS70 (uncharacterized protein LOC111005214 OS=Momordica charantia OX=3673 GN=LOC111005214 PE=4 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 7.7e-242
Identity = 436/438 (99.54%), Postives = 437/438 (99.77%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG
Sbjct: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
           HENSCTGTK SCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI
Sbjct: 64  HENSCTGTKXSCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD
Sbjct: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSET+YNIGVQI
Sbjct: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETLYNIGVQI 243

Query: 244 SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG 303
           SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG
Sbjct: 244 SGEKANLDDSASVSKSVALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGG 303

Query: 304 EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE 363
           EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE
Sbjct: 304 EENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGE 363

Query: 364 SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER 423
           SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER
Sbjct: 364 SSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAER 423

Query: 424 RHYRKYRGWREGLLCCRF 442
           RHYRKYRGWREGLLCCRF
Sbjct: 424 RHYRKYRGWREGLLCCRF 441

[Close]

BLAST of MS001033 vs. ExPASy TrEMBL
Match: A0A1S3BDI6 (uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.5e-149
Identity = 300/445 (67.42%), Postives = 344/445 (77.30%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESD   Y+S+TS    P+ LECNY +   Q++VMS NP  LSC EKINQE+ IQSS+S+ 
Sbjct: 4   ESDSSFYNSMTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSC 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
             N C  TKI+ SS D FD+NA+GISAF A S+ KPS SYVDKSVME QM KTIVCDQEI
Sbjct: 64  DGNICMITKINRSSTDVFDNNAEGISAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           +VNDVKDICID+G++SLENFFF+ST EKSI KI  LEED NE  IKE E S +VSK IAD
Sbjct: 124 NVNDVKDICIDEGVASLENFFFKSTVEKSISKISPLEEDRNEGSIKEKETSFEVSKFIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           D K+SLEDHFA DWTTH+DAKDLTQIEE +L+L E +V +QKLV+KSC SE++  IGVQI
Sbjct: 184 DHKVSLEDHFAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQI 243

Query: 244 SGEKANLDDSASVSKSV-------ALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSV 303
           SGEKANL+D +S SKSV       ALGS+AE P+ N   +P  +N EFENGSI L  NS+
Sbjct: 244 SGEKANLEDPSSASKSVDSCNDTPALGSAAEPPSHNIAAHPSGYNDEFENGSIALTLNSI 303

Query: 304 SPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQ 363
           SPV NGGEE+                  QEC   S S + TQVSTNLE+RTSD+RL+SSQ
Sbjct: 304 SPVANGGEEH------------------QECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQ 363

Query: 364 TQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPV 423
             +DIGESSFSAVDPLASLVTYSGP+AYSGSISLRSESS  STRSFAFPILQ+EWNSSPV
Sbjct: 364 NMNDIGESSFSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPV 423

Query: 424 KMVKAERRHYRKYRGWREGLLCCRF 442
           KMVKAERRHYRKYRGWREGLLCC+F
Sbjct: 424 KMVKAERRHYRKYRGWREGLLCCKF 430

[Close]

BLAST of MS001033 vs. ExPASy TrEMBL
Match: A0A6J1GGY0 (uncharacterized protein LOC111454119 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454119 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.5e-149
Identity = 304/447 (68.01%), Postives = 353/447 (78.97%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESD P Y S+TS  CVP+ +ECNY+T E Q+Q++S +PIGL C EKIN EDAIQS  STG
Sbjct: 4   ESDLPFYSSMTSSNCVPESIECNYNT-ELQHQIVSIDPIGLLCREKINHEDAIQSPSSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
             NSC  TKI+ SSVD FDDNA+GI+AF++ S KK SDSYVDKSVME QM   IVCD+EI
Sbjct: 64  GGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSTMIVCDKEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           +VNDVKDICID+G+ SL NF FRSTDEKS +K L L +  NE  IKE +NSS+V +SIAD
Sbjct: 124 NVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSIKEQKNSSEVLESIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           +KKISLEDHFA DW+TH+DAKDL QIEEA+L+  E +V +QKLVR+S  SE++ ++G+QI
Sbjct: 184 NKKISLEDHFATDWSTHNDAKDLNQIEEAKLNQSEPQVPVQKLVRESHSSESLDSLGIQI 243

Query: 244 SGEKANLDDSASVSKSV-------ALGSSAESPNDNNPT-YPLAHNHEFENGSITLNFNS 303
           S EKAN +D AS  KSV       ALG+ AESPN+N PT  P AHN+EFE GS TLN NS
Sbjct: 244 SSEKANSEDPASAFKSVESCNDNSALGTEAESPNENIPTQQPSAHNNEFEKGSTTLNLNS 303

Query: 304 VSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSS 363
           +SP+VNG EE+HGN   +YP P+ SS+ TQEC  S+ SA  TQVST        +RL+SS
Sbjct: 304 ISPMVNGEEEHHGNINSDYPGPMTSSAGTQECYGSNDSAFGTQVST--------SRLISS 363

Query: 364 QTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPIL-QSEWNSS 423
           QT HD GESSFSA+DPLASLVTYSGPIAYSGSISLRSESS  STRSFAFPIL QSEWNSS
Sbjct: 364 QTAHDSGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQQSEWNSS 423

Query: 424 PVKMVKAERRHYRKYRGWREGLLCCRF 442
           PVKMVKAERRHYRKYRGWREGLLCCRF
Sbjct: 424 PVKMVKAERRHYRKYRGWREGLLCCRF 439

[Close]

BLAST of MS001033 vs. ExPASy TrEMBL
Match: A0A6J1KPB6 (uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 4.5e-149
Identity = 301/446 (67.49%), Postives = 352/446 (78.92%), Query Frame = 0


Query: 4   ESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTG 63
           ESD P Y S+TS  CVP+ +E NY+T E Q+Q++S +PIGL C EKIN EDAIQS  STG
Sbjct: 4   ESDPPFYSSMTSSNCVPESIEGNYNT-ELQHQIISIDPIGLLCREKINHEDAIQSPSSTG 63

Query: 64  HENSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEI 123
             NSC  TKI+ SSVD FDDNA+GI+AF++ S KK SDSYVDKSVME QM K IVCD+EI
Sbjct: 64  GGNSCLTTKINHSSVDCFDDNAEGINAFMSSSGKKSSDSYVDKSVMECQMSKMIVCDKEI 123

Query: 124 DVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIAD 183
           +VNDVKDICID+G+ SL NF FRSTDEKS +K L L +  NE  +KE +NSS+V +SIAD
Sbjct: 124 NVNDVKDICIDEGVPSLVNFIFRSTDEKSSYKTLPLNQ--NEGSVKEQKNSSEVLESIAD 183

Query: 184 DKKISLEDHFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQI 243
           +KKISLEDHFA DW+TH+DAKDL QIEEA+L+  E +V +QKLVR+S  SE++ N+G+QI
Sbjct: 184 NKKISLEDHFASDWSTHNDAKDLNQIEEAKLNQSEPQVLVQKLVRESHSSESLDNLGIQI 243

Query: 244 SGEKANLDDSASVSKSV-------ALGSSAESPNDNNPT-YPLAHNHEFENGSITLNFNS 303
           S EKAN +D AS  KSV       ALG+ AES N+N PT +P A N+EFE GS TLN NS
Sbjct: 244 SSEKANSEDPASAFKSVESCNDNSALGTEAESTNENIPTQHPSARNNEFEKGSTTLNLNS 303

Query: 304 VSPVVNGGEENHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSS 363
           +SP+ NG EE+HGN  L++P P+ SS+ TQEC  S+ SA  TQVST        +RL+SS
Sbjct: 304 ISPMANGEEEHHGNIKLDFPGPMTSSAGTQECYGSNDSAFGTQVST--------SRLISS 363

Query: 364 QTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSP 423
           QT HD GESSFSA+DPLASLVTYSGPIAYSGSISLRSESS  STRSFAFPILQSEWNSSP
Sbjct: 364 QTAHDCGESSFSALDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPILQSEWNSSP 423

Query: 424 VKMVKAERRHYRKYRGWREGLLCCRF 442
           VKMVKAERRHYRKYRGWREGLLCCRF
Sbjct: 424 VKMVKAERRHYRKYRGWREGLLCCRF 438

[Close]

BLAST of MS001033 vs. ExPASy TrEMBL
Match: A0A5A7V9F8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00900 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 3.2e-147
Identity = 295/436 (67.66%), Postives = 338/436 (77.52%), Query Frame = 0


Query: 13  ITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEKINQEDAIQSSYSTGHENSCTGTK 72
           +TS    P+ LECNY +   Q++VMS NP  LSC EKINQE+ IQSS+S+   N C  TK
Sbjct: 1   MTSRNDAPESLECNYSSTVLQHRVMSNNPTSLSCQEKINQENVIQSSHSSCDGNICMITK 60

Query: 73  ISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIVCDQEIDVNDVKDIC 132
           I+ SS D FD+NA+GI AF A S+ KPS SYVDKSVME QM KTIVCDQEI+VNDVKDIC
Sbjct: 61  INRSSTDVFDNNAEGIGAFGASSNMKPSFSYVDKSVMECQMSKTIVCDQEINVNDVKDIC 120

Query: 133 IDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVSKSIADDKKISLEDH 192
           ID+G++SLENFFF+ST EKSI KI  LEED NE  IKE E S +VSK IADD K+SLEDH
Sbjct: 121 IDEGVASLENFFFKSTVEKSISKISPLEEDRNERSIKEKETSFEVSKFIADDHKVSLEDH 180

Query: 193 FARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKLVRKSCYSETVYNIGVQISGEKANLDD 252
           FA DWTTH+DAKDLTQIEE +L+L E +V +QKLV+KSC SE++  IGVQISGEKANL+D
Sbjct: 181 FAMDWTTHNDAKDLTQIEEEKLNLSEPEVLMQKLVKKSCSSESLDKIGVQISGEKANLED 240

Query: 253 SASVSKSV-------ALGSSAESPNDNNPTYPLAHNHEFENGSITLNFNSVSPVVNGGEE 312
            +S SKSV       ALGS+AE P+ N P +P  +N EFENGSI L  NS+SPV NGGEE
Sbjct: 241 PSSASKSVDSCNDTPALGSAAEPPSHNIPAHPSGYNDEFENGSIALTLNSISPVANGGEE 300

Query: 313 NHGNTILNYPAPLASSSVTQECRQSSGSAVETQVSTNLEFRTSDARLVSSQTQHDIGESS 372
           +                  QEC   S S + TQVSTNLE+RTSD+RL+SSQ  +DIGESS
Sbjct: 301 H------------------QECCGRSDSVIGTQVSTNLEYRTSDSRLLSSQNMNDIGESS 360

Query: 373 FSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQSEWNSSPVKMVKAERRH 432
           FSAVDPLASLVTYSGP+AYSGSISLRSESS  STRSFAFPILQ+EWNSSPVKMVKAERRH
Sbjct: 361 FSAVDPLASLVTYSGPVAYSGSISLRSESSTTSTRSFAFPILQTEWNSSPVKMVKAERRH 418

Query: 433 YRKYRGWREGLLCCRF 442
           YRKYRGWREGLLCC+F
Sbjct: 421 YRKYRGWREGLLCCKF 418

[Close]

BLAST of MS001033 vs. TAIR 10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related )

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-26
Identity = 137/467 (29.34%), Postives = 213/467 (45.61%), Query Frame = 0


Query: 3   AESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEK-INQEDAIQSSYS 62
           A++DH + +SI   K   K  +C  +  E            L  PE   N  +  +  Y 
Sbjct: 3   ADNDHALGNSIEICKDESKPHQCLDENWEDAE---------LKVPENGKNNNNVCELFYD 62

Query: 63  T--GHE-NSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIV 122
           T  G E  +  G K+  +S D  D N D      +P  K P   Y+DK+V    +P+ +V
Sbjct: 63  TRSGEEWENEAGKKVRDTSHD-CDANVD------SPEKKDPV-FYMDKNVTACDLPEIVV 122

Query: 123 CDQEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVS 182
           C +E   + VKDIC+D+G+   E F F   D        S++    E  +K  + + + S
Sbjct: 123 CYKENTYHIVKDICVDEGVPVQEKFLFGEKD--------SVKSSSTEDLMKADKTNVNPS 182

Query: 183 KSIADDKKISLED--HFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKL-VRKSCYSET 242
           ++ + +  IS  D   F  D  T  D ++ +  + A  +   +  + + L V +   +  
Sbjct: 183 ETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEGTSSNYNQEHLIVTEEVKASP 242

Query: 243 VYNIGVQISGEKANLDDSASVSKS------VALG---SSAESPNDNNPTYPLAHNHEFEN 302
            + +         N  D  ++S+       + LG   S  +     N     + +HE ++
Sbjct: 243 THGLSPSEIEPDENSKDEVAISQDNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQS 302

Query: 303 GS-------ITLNFNSVSPVVNGGEE-NHGNTILNYPAPLASSSVTQECRQSSGSAVETQ 362
            S        +L   ++   +   EE   G   L+  +   S    + C +      E  
Sbjct: 303 PSQLQDKEKRSLETTAIETELEKTEEPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENH 362

Query: 363 VSTN--LEFRTSDARLVSSQTQHDIGESSFSAVD--PLASLVTYSGPIAYSGSISLRSES 422
              N  +E    D +  SS+     GE+SFSA D   ++  +TYSGPIAYSGS+S+RS++
Sbjct: 363 HQQNCLVENSYEDDKFSSSR----FGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDA 422

Query: 423 SAASTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 442
           S  S RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Sbjct: 423 STTSGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of MS001033 vs. TAIR 10
Match: AT2G03810.2 (18S pre-ribosomal assembly protein gar2-related )

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-26
Identity = 137/467 (29.34%), Postives = 213/467 (45.61%), Query Frame = 0


Query: 3   AESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEK-INQEDAIQSSYS 62
           A++DH + +SI   K   K  +C  +  E            L  PE   N  +  +  Y 
Sbjct: 3   ADNDHALGNSIEICKDESKPHQCLDENWEDAE---------LKVPENGKNNNNVCELFYD 62

Query: 63  T--GHE-NSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIV 122
           T  G E  +  G K+  +S D  D N D      +P  K P   Y+DK+V    +P+ +V
Sbjct: 63  TRSGEEWENEAGKKVRDTSHD-CDANVD------SPEKKDPV-FYMDKNVTACDLPEIVV 122

Query: 123 CDQEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVS 182
           C +E   + VKDIC+D+G+   E F F   D        S++    E  +K  + + + S
Sbjct: 123 CYKENTYHIVKDICVDEGVPVQEKFLFGEKD--------SVKSSSTEDLMKADKTNVNPS 182

Query: 183 KSIADDKKISLED--HFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKL-VRKSCYSET 242
           ++ + +  IS  D   F  D  T  D ++ +  + A  +   +  + + L V +   +  
Sbjct: 183 ETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEGTSSNYNQEHLIVTEEVKASP 242

Query: 243 VYNIGVQISGEKANLDDSASVSKS------VALG---SSAESPNDNNPTYPLAHNHEFEN 302
            + +         N  D  ++S+       + LG   S  +     N     + +HE ++
Sbjct: 243 THGLSPSEIEPDENSKDEVAISQDNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQS 302

Query: 303 GS-------ITLNFNSVSPVVNGGEE-NHGNTILNYPAPLASSSVTQECRQSSGSAVETQ 362
            S        +L   ++   +   EE   G   L+  +   S    + C +      E  
Sbjct: 303 PSQLQDKEKRSLETTAIETELEKTEEPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENH 362

Query: 363 VSTN--LEFRTSDARLVSSQTQHDIGESSFSAVD--PLASLVTYSGPIAYSGSISLRSES 422
              N  +E    D +  SS+     GE+SFSA D   ++  +TYSGPIAYSGS+S+RS++
Sbjct: 363 HQQNCLVENSYEDDKFSSSR----FGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDA 422

Query: 423 SAASTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 442
           S  S RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Sbjct: 423 STTSGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of MS001033 vs. TAIR 10
Match: AT2G03810.3 (18S pre-ribosomal assembly protein gar2-related )

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-26
Identity = 137/467 (29.34%), Postives = 213/467 (45.61%), Query Frame = 0


Query: 3   AESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEK-INQEDAIQSSYS 62
           A++DH + +SI   K   K  +C  +  E            L  PE   N  +  +  Y 
Sbjct: 3   ADNDHALGNSIEICKDESKPHQCLDENWEDAE---------LKVPENGKNNNNVCELFYD 62

Query: 63  T--GHE-NSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIV 122
           T  G E  +  G K+  +S D  D N D      +P  K P   Y+DK+V    +P+ +V
Sbjct: 63  TRSGEEWENEAGKKVRDTSHD-CDANVD------SPEKKDPV-FYMDKNVTACDLPEIVV 122

Query: 123 CDQEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVS 182
           C +E   + VKDIC+D+G+   E F F   D        S++    E  +K  + + + S
Sbjct: 123 CYKENTYHIVKDICVDEGVPVQEKFLFGEKD--------SVKSSSTEDLMKADKTNVNPS 182

Query: 183 KSIADDKKISLED--HFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKL-VRKSCYSET 242
           ++ + +  IS  D   F  D  T  D ++ +  + A  +   +  + + L V +   +  
Sbjct: 183 ETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEGTSSNYNQEHLIVTEEVKASP 242

Query: 243 VYNIGVQISGEKANLDDSASVSKS------VALG---SSAESPNDNNPTYPLAHNHEFEN 302
            + +         N  D  ++S+       + LG   S  +     N     + +HE ++
Sbjct: 243 THGLSPSEIEPDENSKDEVAISQDNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQS 302

Query: 303 GS-------ITLNFNSVSPVVNGGEE-NHGNTILNYPAPLASSSVTQECRQSSGSAVETQ 362
            S        +L   ++   +   EE   G   L+  +   S    + C +      E  
Sbjct: 303 PSQLQDKEKRSLETTAIETELEKTEEPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENH 362

Query: 363 VSTN--LEFRTSDARLVSSQTQHDIGESSFSAVD--PLASLVTYSGPIAYSGSISLRSES 422
              N  +E    D +  SS+     GE+SFSA D   ++  +TYSGPIAYSGS+S+RS++
Sbjct: 363 HQQNCLVENSYEDDKFSSSR----FGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDA 422

Query: 423 SAASTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 442
           S  S RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Sbjct: 423 STTSGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of MS001033 vs. TAIR 10
Match: AT2G03810.4 (18S pre-ribosomal assembly protein gar2-related )

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-26
Identity = 137/467 (29.34%), Postives = 213/467 (45.61%), Query Frame = 0


Query: 3   AESDHPVYHSITSPKCVPKLLECNYDTLESQNQVMSKNPIGLSCPEK-INQEDAIQSSYS 62
           A++DH + +SI   K   K  +C  +  E            L  PE   N  +  +  Y 
Sbjct: 3   ADNDHALGNSIEICKDESKPHQCLDENWEDAE---------LKVPENGKNNNNVCELFYD 62

Query: 63  T--GHE-NSCTGTKISCSSVDGFDDNADGISAFVAPSSKKPSDSYVDKSVMEFQMPKTIV 122
           T  G E  +  G K+  +S D  D N D      +P  K P   Y+DK+V    +P+ +V
Sbjct: 63  TRSGEEWENEAGKKVRDTSHD-CDANVD------SPEKKDPV-FYMDKNVTACDLPEIVV 122

Query: 123 CDQEIDVNDVKDICIDDGLSSLENFFFRSTDEKSIFKILSLEEDPNESPIKEPENSSDVS 182
           C +E   + VKDIC+D+G+   E F F   D        S++    E  +K  + + + S
Sbjct: 123 CYKENTYHIVKDICVDEGVPVQEKFLFGEKD--------SVKSSSTEDLMKADKTNVNPS 182

Query: 183 KSIADDKKISLED--HFARDWTTHDDAKDLTQIEEAQLDLREAKVSLQKL-VRKSCYSET 242
           ++ + +  IS  D   F  D  T  D ++ +  + A  +   +  + + L V +   +  
Sbjct: 183 ETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEGTSSNYNQEHLIVTEEVKASP 242

Query: 243 VYNIGVQISGEKANLDDSASVSKS------VALG---SSAESPNDNNPTYPLAHNHEFEN 302
            + +         N  D  ++S+       + LG   S  +     N     + +HE ++
Sbjct: 243 THGLSPSEIEPDENSKDEVAISQDNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQS 302

Query: 303 GS-------ITLNFNSVSPVVNGGEE-NHGNTILNYPAPLASSSVTQECRQSSGSAVETQ 362
            S        +L   ++   +   EE   G   L+  +   S    + C +      E  
Sbjct: 303 PSQLQDKEKRSLETTAIETELEKTEEPKQGEEKLSSVSTTTSQEPNKTCNEPEKPETENH 362

Query: 363 VSTN--LEFRTSDARLVSSQTQHDIGESSFSAVD--PLASLVTYSGPIAYSGSISLRSES 422
              N  +E    D +  SS+     GE+SFSA D   ++  +TYSGPIAYSGS+S+RS++
Sbjct: 363 HQQNCLVENSYEDDKFSSSR----FGETSFSAADSVSISGHITYSGPIAYSGSLSVRSDA 422

Query: 423 SAASTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF 442
           S  S RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Sbjct: 423 STTSGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of MS001033 vs. TAIR 10
Match: AT1G13650.2 (BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 8.1e-10
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 349 DARLVSSQTQHDIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSAASTRSFAFPILQ 408
           D  L+     +  GE SF         +TY GP++ S ++S+RS+ ++AS  SFA PILQ
Sbjct: 113 DNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDGTSAS--SFALPILQ 172

Query: 409 SEWNSSPVKMVKAERRHYR 428
           SEWNSSPV+M KAE    R
Sbjct: 173 SEWNSSPVRMGKAEETQLR 189

The following BLAST results are available for this feature:

BLAST of MS001033 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132338.1	1.6e-241	99.54	uncharacterized protein LOC111005214 [Momordica charantia] >XP_022132339.1 uncha...	[more]
XP_038886032.1	2.6e-167	73.23	uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886033.1 unchara...	[more]
XP_011657412.1	8.3e-150	67.04	uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657413.1 uncharact...	[more]
KAG6585259.1	8.3e-150	67.71	hypothetical protein SDJN03_17992, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951209.1	3.2e-149	68.01	uncharacterized protein LOC111454119 isoform X1 [Cucurbita moschata] >XP_0229512...	[more]

BLAST of MS001033 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS001033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BS70	7.7e-242	99.54	uncharacterized protein LOC111005214 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A1S3BDI6	1.5e-149	67.42	uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GGY0	1.5e-149	68.01	uncharacterized protein LOC111454119 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KPB6	4.5e-149	67.49	uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7V9F8	3.2e-147	67.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MS001033 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03810.1	2.8e-26	29.34	18S pre-ribosomal assembly protein gar2-related	[more]
AT2G03810.2	2.8e-26	29.34	18S pre-ribosomal assembly protein gar2-related	[more]
AT2G03810.3	2.8e-26	29.34	18S pre-ribosomal assembly protein gar2-related	[more]
AT2G03810.4	2.8e-26	29.34	18S pre-ribosomal assembly protein gar2-related	[more]
AT1G13650.2	8.1e-10	45.57	BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein g...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN	coord: 33..441
IPR040378	Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE	PANTHER	PTHR33914	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN	coord: 33..441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001033.1	MS001033.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009786	regulation of asymmetric cell division