MS001021 (gene) Bitter gourd (TR) v1

Overview


Name	MS001021
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
Location	scaffold36: 892028 .. 893860 (-)
RNA-Seq Expression	MS001021
Synteny	MS001021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGTGGTGTACGTGTCCAGCTCAATAGATGGCAGCAAGCAGCAGTCGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGACTTAATAGCAGCTCTTGGGGAAACAACTGGAAAGCCTGCTTTTGAAAGGGTCCTTGAAAGGATGAAAAAGAGTGCCGAAGGCAGAGTAAGTTCTTAATTATAAAATCTCATGTTTCCATGTTTCATATTCCTTTGTCATTTGCAAGTGTCAAATTTGATATGTTTGATATGTTTGTATGGAAATGAAAAATTTGATATGTTTGTATTTAAGATGATTAAGAATACAAAATAAAATGAATTCTCTTTATCTTTAAATATAACGGTTATCATGTACAAATTTTGAAATTACTTTTCTTTGAGTGCTGCAGGAACAACATGGGTTATTTTGCCTTATCAAATTGAATTGGTTCTTGTAATTTGTTGAGTTGTTTATCTTGTGTATTCTTATTGGATCTTGTGATTGGACTGAGTTGTGCTCATTCCTTTCTTCCCGCACCAAGTCTTCGTTTCCTCCCTTGGAAACACACACTATTTTGACCGAAGTGTTAGTGTTGGACATGCTCTAGAACATGTGGTTTGGAGTTTTTTTTTTAATTATAATTTCTTTTTTCAATTTTGTTTACATTTGGGCAATGCAAGAGACAAATCTAGACACGCAGGGATGACAATTAATCATATTGGCTGATATGAAAAACTTTAAAGGTATTTGTTTTAGCTACCTGTTTCTATTTTGATGGACATTATTGGACGCATCAATTACAAGTCTCCTAATGGAATATGGTGCTGCAAGATCTATATCATATCTTTTTTGTATCTGTAATGATGCCTTCTTATTGCCCTCTTATTGCTCATTTTGAATTCTCCATGTTTTTCCAAAACATCGTTCTGTTTTTCTTTATTCTATAAATTTTCAATATAGTTCTTTGGTTTCTACCGTAACTTTCTAACGAACTGAATTCTCTACATAGAATGAGAAACTTCATAACAAATCGGACCCTCCAATCTACTATTTCAGATGAATGGTTTAGAATTAGTTTCTTTCATTCCCTACTCTACCGCAGTTGATTTTTATTCTGAGATGGTGTTGTCATTTGGGCTCGGTTCTTTCCTTTATAGTACGATACTTGTACCGAATGAGATAAAATGTTTTAAGAGACGTTCCTTGTAGGCCAGCTTGCTAAATTTATTTCTCATCTGCTGGATGACTCGAATGTCTTGAAAATCCTTTTTTTTTTTTAATCATGCACTAGCTCTCGTAACTCGTTCATTTGAATGTTAAACAAAGAAATTTCTTCTTCAGGCAGTATTGTTGGAGCGACCACGTGTCTTATCATCAGAAGTTGGACACGCATGGGACCTTCCATCCAACACATTTGGTGCTGCATATGCTAATTTTATGGGTTCCAGGAACTTTTCTCCTGATGACCGGCCTCCTGTTCGATTCATGGACACCGACGAACTGGAGTATGTTGCCATGCGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTTTTTGGTCTTCCCACAAACTTGATTGGCGAATCGGCATTGAAGGTTATTGAATTTGGACAAATGCAGCTTCCAATGTGCATGCTGTCTGTTTTGGGAGGCACAGCAAGATTCAATGACAAACAGAGAAAATTGTTCTTCCAAGACTACTTTCCTTGGGCCATGCGTGCTGGCATGCAGTGCACAGATCTCATGTGTGTATATTATGAGCGACACTTCCACGAGGATTTGGACGAAGTGCGAGCTAAATGGGGCATAGTTCCTGCACCTCCATCTCCTAAAGCG

mRNA sequence

ATGGCAGGTGGTGTACGTGTCCAGCTCAATAGATGGCAGCAAGCAGCAGTCGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGACTTAATAGCAGCTCTTGGGGAAACAACTGGAAAGCCTGCTTTTGAAAGGGTCCTTGAAAGGATGAAAAAGAGTGCCGAAGGCAGAGCAGTATTGTTGGAGCGACCACGTGTCTTATCATCAGAAGTTGGACACGCATGGGACCTTCCATCCAACACATTTGGTGCTGCATATGCTAATTTTATGGGTTCCAGGAACTTTTCTCCTGATGACCGGCCTCCTGTTCGATTCATGGACACCGACGAACTGGAGTATGTTGCCATGCGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTTTTTGGTCTTCCCACAAACTTGATTGGCGAATCGGCATTGAAGGTTATTGAATTTGGACAAATGCAGCTTCCAATGTGCATGCTGTCTGTTTTGGGAGGCACAGCAAGATTCAATGACAAACAGAGAAAATTGTTCTTCCAAGACTACTTTCCTTGGGCCATGCGTGCTGGCATGCAGTGCACAGATCTCATGTGTGTATATTATGAGCGACACTTCCACGAGGATTTGGACGAAGTGCGAGCTAAATGGGGCATAGTTCCTGCACCTCCATCTCCTAAAGCG

Coding sequence (CDS)

ATGGCAGGTGGTGTACGTGTCCAGCTCAATAGATGGCAGCAAGCAGCAGTCGCACTTGGTTCAGCAGTAGGTGCCTTGCTAGATCCACGGCGAGCAGACTTAATAGCAGCTCTTGGGGAAACAACTGGAAAGCCTGCTTTTGAAAGGGTCCTTGAAAGGATGAAAAAGAGTGCCGAAGGCAGAGCAGTATTGTTGGAGCGACCACGTGTCTTATCATCAGAAGTTGGACACGCATGGGACCTTCCATCCAACACATTTGGTGCTGCATATGCTAATTTTATGGGTTCCAGGAACTTTTCTCCTGATGACCGGCCTCCTGTTCGATTCATGGACACCGACGAACTGGAGTATGTTGCCATGCGAGCTCGTGAGGTTCATGACTTCTGGCACACCCTTTTTGGTCTTCCCACAAACTTGATTGGCGAATCGGCATTGAAGGTTATTGAATTTGGACAAATGCAGCTTCCAATGTGCATGCTGTCTGTTTTGGGAGGCACAGCAAGATTCAATGACAAACAGAGAAAATTGTTCTTCCAAGACTACTTTCCTTGGGCCATGCGTGCTGGCATGCAGTGCACAGATCTCATGTGTGTATATTATGAGCGACACTTCCACGAGGATTTGGACGAAGTGCGAGCTAAATGGGGCATAGTTCCTGCACCTCCATCTCCTAAAGCG

Protein sequence

MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA

Homology

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BLAST of MS001021 vs. NCBI nr
Match: XP_022131867.1 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 465.3 bits (1196), Expect = 3.0e-127
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 227
           YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA
Sbjct: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 226

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BLAST of MS001021 vs. NCBI nr
Match: XP_022131865.1 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1 [Momordica charantia] >XP_022131866.1 ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 465.3 bits (1196), Expect = 3.0e-127
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 227
           YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA
Sbjct: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 226

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BLAST of MS001021 vs. NCBI nr
Match: XP_038886681.1 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Benincasa hispida] >XP_038886682.1 ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Benincasa hispida])

HSP 1 Score: 443.7 bits (1140), Expect = 9.3e-121
Identity = 210/224 (93.75%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           M GGVR+QLNRWQQAAVA GSAVGALLDPRRADLIAALGETTGKPAFERVLERMKK+AEG
Sbjct: 1   MVGGVRIQLNRWQQAAVAFGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKTAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDTDELEYVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFN+KQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSP 225
           YFPWA+RAGMQCTDLMC+YYERHFHEDL++VRAKWGI+PAPPSP
Sbjct: 181 YFPWAIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPSP 224

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BLAST of MS001021 vs. NCBI nr
Match: KAG7020173.1 (Ubiquinone biosynthesis protein COQ4-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120
Identity = 210/223 (94.17%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 4   GVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAV 63
           GVR+QLN+WQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMK+SAEGRAV
Sbjct: 30  GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGRAV 89

Query: 64  LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 123
           LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR
Sbjct: 90  LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 149

Query: 124 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 183
           EVHDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFNDKQR LFFQ YFP
Sbjct: 150 EVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFQHYFP 209

Query: 184 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 227
           WA+RAGM+C DLMC+YYERHFHEDLD+VRAKWGI+PAPPSPKA
Sbjct: 210 WAIRAGMRCNDLMCIYYERHFHEDLDDVRAKWGIIPAPPSPKA 252

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BLAST of MS001021 vs. NCBI nr
Match: XP_023537801.1 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.8 bits (1135), Expect = 3.5e-120
Identity = 209/222 (94.14%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 4   GVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAV 63
           GVR+QLN+WQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMK+SAEGRAV
Sbjct: 3   GVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGRAV 62

Query: 64  LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 123
           LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR
Sbjct: 63  LLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 122

Query: 124 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 183
           E+HDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFNDKQR LFFQ YFP
Sbjct: 123 EIHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFQHYFP 182

Query: 184 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPK 226
           WA+RAGM+C DLMCVYYERHFHEDLD+VRAKWGI+PAPPSPK
Sbjct: 183 WAIRAGMRCNDLMCVYYERHFHEDLDDVRAKWGIIPAPPSPK 224

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BLAST of MS001021 vs. ExPASy Swiss-Prot
Match: Q9ZPR0 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g03690 PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.6e-107
Identity = 182/220 (82.73%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           RV L+RWQQAAVA+GSA+GAL+DPRRADLIAALGETTGKPAFE VLERMKKS EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 66  ERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 125
           ERPRV+S +VGHAWDLP NTFGAAYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 126 HDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFPWA 185
           HD WHTLFGLPTNLIGES+LKVIEF QM LPMCMLSV+GGT RFN+KQR +F + Y PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 186 MRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPK 226
           +RAG QCTDLMCVYYERHF EDL++VR KWGI+PAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

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BLAST of MS001021 vs. ExPASy Swiss-Prot
Match: Q16FT5 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti OX=7159 GN=AAEL014646 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-50
Identity = 95/214 (44.39%), Postives = 137/214 (64.02%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           +++L   Q+  ++ GS++ AL+DPRR D+IA LGETTG PA E + ++M+ S EGR +L 
Sbjct: 55  QIKLTELQRVILSAGSSIAALVDPRRHDMIACLGETTGVPALENIRDQMRNSDEGRQILE 114

Query: 66  ERPRVLSSEVG--HAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 125
           ++PR+ +  V       LP NTFG  Y +FM     +PD R  V+FMD  EL YV  R R
Sbjct: 115 DKPRINTRTVNMDALKKLPENTFGYQYVSFMEKYEITPDSRMEVKFMDDPELAYVMTRYR 174

Query: 126 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 185
           E HD  HT+FG+PTN++GE A+K +E   + LPMC    + G  R   KQR+ + Q Y P
Sbjct: 175 ETHDLVHTVFGMPTNMLGEVAIKWVEAINIGLPMCYGGAIFGAFRLRPKQRQNYLQRYLP 234

Query: 186 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGI 218
           WA+RAG +   LMCVY+E+ + +D++E+R +  I
Sbjct: 235 WALRAGQRARPLMCVYWEKRWEQDIEELRKELNI 268

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BLAST of MS001021 vs. ExPASy Swiss-Prot
Match: B3M6C8 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananassae OX=7217 GN=GF24309 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.6e-46
Identity = 87/214 (40.65%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           R++++ +Q+  +  GS++ ALLDPRR D+IA LGETTG+ A E +L+ M+ S EG+ ++ 
Sbjct: 47  RIEISPFQRVILGAGSSIAALLDPRRHDMIACLGETTGEGALENILDTMQASEEGQRIMA 106

Query: 66  ERPRVLSSEVGHAW--DLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 125
           E+PR+ +S +       LP+++FGAAY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 107 EKPRIHTSTIDFKLLESLPADSFGAAYVKFLKDNQVTPDSRMAVRFLEDPKLAYLMTRYR 166

Query: 126 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 185
           E HD  HT+ G+PTN++GE A+K +E     LPMC    + G  R   KQR+ + + Y P
Sbjct: 167 ECHDLIHTVLGMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 226

Query: 186 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGI 218
           WA+  G +   LM VY+E+ + + L ++RA+ GI
Sbjct: 227 WALENGKRSKPLMPVYWEKRWEQKLQDLRAELGI 260

[Close]

BLAST of MS001021 vs. ExPASy Swiss-Prot
Match: B4H6M2 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila persimilis OX=7234 GN=GL15483 PE=3 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-45
Identity = 85/214 (39.72%), Postives = 135/214 (63.08%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           R+++  +Q+  +  GS++ A+LDPRR D+IA LGETTG+ A   +++ M +S EG+ +++
Sbjct: 48  RIEITTFQRMLLGAGSSIAAILDPRRHDMIACLGETTGEDALWNIMDTMHESEEGQRIMV 107

Query: 66  ERPRVLSSEVG--HAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 125
           E+PR+ +S +       LP++TFGAAY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 108 EKPRIHTSTIDFKRLESLPADTFGAAYVKFLKDNKVTPDSRMAVRFLEDPKLAYLMTRYR 167

Query: 126 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 185
           E HD  HT+  +PTN++GE A+K +E     LPMC    + G  R   KQR+ + + Y P
Sbjct: 168 ECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 227

Query: 186 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGI 218
           WA+  G Q   LM VY+E  + ++++E+RA+ GI
Sbjct: 228 WALENGKQMKPLMPVYWEERWEQNVNELRAELGI 261

[Close]

BLAST of MS001021 vs. ExPASy Swiss-Prot
Match: Q2LZH7 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA16732 PE=3 SV=3)

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-45
Identity = 85/214 (39.72%), Postives = 135/214 (63.08%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           R+++  +Q+  +  GS++ A+LDPRR D+IA LGETTG+ A   +++ M +S EG+ +++
Sbjct: 48  RIEITTFQRMLLGAGSSIAAILDPRRHDMIACLGETTGEDALWNIMDTMHESEEGQRIMV 107

Query: 66  ERPRVLSSEVG--HAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAR 125
           E+PR+ +S +       LP++TFGAAY  F+     +PD R  VRF++  +L Y+  R R
Sbjct: 108 EKPRIHTSTIDFKRLESLPADTFGAAYVKFLKDNKVTPDSRMAVRFLEDPKLAYLMTRYR 167

Query: 126 EVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFP 185
           E HD  HT+  +PTN++GE A+K +E     LPMC    + G  R   KQR+ + + Y P
Sbjct: 168 ECHDLIHTVLDMPTNMLGEVAVKWVEALNTGLPMCYGGAVFGAVRLRPKQRRAYLKHYLP 227

Query: 186 WAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGI 218
           WA+  G Q   LM VY+E  + ++++E+RA+ GI
Sbjct: 228 WALENGKQMKPLMPVYWEERWEQNVNELRAELGI 261

[Close]

BLAST of MS001021 vs. ExPASy TrEMBL
Match: A0A6J1BQN4 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004907 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 227
           YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA
Sbjct: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 226

[Close]

BLAST of MS001021 vs. ExPASy TrEMBL
Match: A0A6J1BS76 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004907 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 227
           YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA
Sbjct: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPKA 226

[Close]

BLAST of MS001021 vs. ExPASy TrEMBL
Match: A0A0A0KFN6 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_6G366570 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 3.8e-120
Identity = 208/223 (93.27%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           M GGVR+QLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MVGGVRIQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVL+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAM
Sbjct: 61  RAVLMERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFN+KQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPS 224
           YFPW++RAGMQCTDLMC+YYERHFHEDL++VRAKWGI+PAPPS
Sbjct: 181 YFPWSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]

BLAST of MS001021 vs. ExPASy TrEMBL
Match: A0A6J1HFH7 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462982 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 208/222 (93.69%), Postives = 215/222 (96.85%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           M GG  +QLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG
Sbjct: 1   MVGGAHIQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDEL+YVAM
Sbjct: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELKYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFND+QRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDRQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPP 223
           YFPWA+RAGMQCTDLMC+YYERHFHEDLDE+RAKWGI+P PP
Sbjct: 181 YFPWAIRAGMQCTDLMCIYYERHFHEDLDEMRAKWGIIPLPP 222

[Close]

BLAST of MS001021 vs. ExPASy TrEMBL
Match: A0A1S3BDF6 (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488460 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 206/223 (92.38%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MAGGVRVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEG 60
           M GGVR+QLN+WQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMK+SAEG
Sbjct: 1   MVGGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEG 60

Query: 61  RAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAM 120
           RAVL+ERPRVLSSEVGHAWDLPSNTFG AYANFMGSRNFSPDDRPPVRFMDT+ELEYVAM
Sbjct: 61  RAVLIERPRVLSSEVGHAWDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAM 120

Query: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQD 180
           RAREVHDFWHTLFGLPTNLIGESALKVIEF QM LPMCMLSVLGGTARFN+KQRKLFFQ 
Sbjct: 121 RAREVHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQH 180

Query: 181 YFPWAMRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPS 224
           YFPW++RAGMQCTDLMC+YYERHFHEDL++VRAKWGI+PAPPS
Sbjct: 181 YFPWSIRAGMQCTDLMCIYYERHFHEDLNDVRAKWGIIPAPPS 223

[Close]

BLAST of MS001021 vs. TAIR 10
Match: AT2G03690.1 (coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein )

HSP 1 Score: 390.2 bits (1001), Expect = 1.1e-108
Identity = 182/220 (82.73%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 6   RVQLNRWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLL 65
           RV L+RWQQAAVA+GSA+GAL+DPRRADLIAALGETTGKPAFE VLERMKKS EGRA+LL
Sbjct: 7   RVPLSRWQQAAVAMGSALGALVDPRRADLIAALGETTGKPAFEMVLERMKKSEEGRAILL 66

Query: 66  ERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREV 125
           ERPRV+S +VGHAWDLP NTFGAAYA FMGSRNFSPDDRPPVRFM+TDEL YVA RAREV
Sbjct: 67  ERPRVVSEQVGHAWDLPENTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVATRAREV 126

Query: 126 HDFWHTLFGLPTNLIGESALKVIEFGQMQLPMCMLSVLGGTARFNDKQRKLFFQDYFPWA 185
           HD WHTLFGLPTNLIGES+LKVIEF QM LPMCMLSV+GGT RFN+KQR +F + Y PWA
Sbjct: 127 HDLWHTLFGLPTNLIGESSLKVIEFEQMYLPMCMLSVIGGTVRFNEKQRSMFLKHYLPWA 186

Query: 186 MRAGMQCTDLMCVYYERHFHEDLDEVRAKWGIVPAPPSPK 226
           +RAG QCTDLMCVYYERHF EDL++VR KWGI+PAP  PK
Sbjct: 187 VRAGRQCTDLMCVYYERHFSEDLEQVRRKWGIIPAPQHPK 226

The following BLAST results are available for this feature:

BLAST of MS001021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131867.1	3.0e-127	99.56	ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2 [Momordic...	[more]
XP_022131865.1	3.0e-127	99.56	ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1 [Momordic...	[more]
XP_038886681.1	9.3e-121	93.75	ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Benincasa hispida] ...	[more]
KAG7020173.1	1.2e-120	94.17	Ubiquinone biosynthesis protein COQ4-like, mitochondrial [Cucurbita argyrosperma...	[more]
XP_023537801.1	3.5e-120	94.14	ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Cucurbita pepo subs...	[more]

BLAST of MS001021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPR0	1.6e-107	82.73	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Arabidopsis thali...	[more]
Q16FT5	4.0e-50	44.39	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Aedes aegypti OX=...	[more]
B3M6C8	4.6e-46	40.65	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila ananas...	[more]
B4H6M2	3.9e-45	39.72	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila persim...	[more]
Q2LZH7	3.9e-45	39.72	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Drosophila pseudo...	[more]

BLAST of MS001021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQN4	1.4e-127	99.56	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Momordica charant...	[more]
A0A6J1BS76	1.4e-127	99.56	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Momordica charant...	[more]
A0A0A0KFN6	3.8e-120	93.27	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis sativus O...	[more]
A0A6J1HFH7	1.1e-119	93.69	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucurbita moschat...	[more]
A0A1S3BDF6	1.9e-119	92.38	Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial OS=Cucumis melo OX=3...	[more]

BLAST of MS001021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03690.1	1.1e-108	82.73	coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 famil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007715	Ubiquinone biosynthesis protein Coq4	PFAM	PF05019	Coq4	coord: 6..221 e-value: 1.7E-81 score: 272.8
IPR007715	Ubiquinone biosynthesis protein Coq4	PANTHER	PTHR12922	UBIQUINONE BIOSYNTHESIS PROTEIN	coord: 5..225
None	No IPR available	PANTHER	PTHR12922:SF9	UBIQUINONE BIOSYNTHESIS PROTEIN COQ4 HOMOLOG, MITOCHONDRIAL	coord: 5..225
IPR027540	Ubiquinone biosynthesis protein Coq4, eukaryotes	HAMAP	MF_03111	Coq4	coord: 2..220 score: 31.617119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001021.1	MS001021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0005743	mitochondrial inner membrane