MS001009 (gene) Bitter gourd (TR) v1

Overview


Name	MS001009
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Location	scaffold36: 831493 .. 833098 (-)
RNA-Seq Expression	MS001009
Synteny	MS001009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAACTGTTGTCCTCCATTGTTGCAAAACTTCTTTTTCTTCTTCCTCAGGCGCGACCTATTGTGTTTGTAAGGATGGGCAAAGCGATCAAGCCCTTCAGAAGAGTCTGGATTATGCCTGTGGAGCTGGAGCCGATTGCACTCCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACCGTAAAGGATCACTGTAGCTATGCCGTTAACAGCTATTTTCAGAGGAAGGGTCAGGTTCAGGGTAGCTGTGATTTCTCAGGAACTGCCACGCCTAGCCCGTCTCCTCCTGGTATTACACCTTCTATTTCAGCTTCTTCATCAACTGTTTTGTTTCTGCTGCTTACAGTTTTTTGGGTCTTTTTATCCTTTTTTCTTACAGCTGGAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACCACTTCAATTCCTTCACCCTCTTCTCTTGCAGTTTTTGGAGAATTGATCACTTTTTAGATAGTACTTTCTGTTGAATGTGTATGTCCCAAATGAAAAGGGGTTTTGAGTTGTTGAATACTTTGTTTACAAGATGTGAATTAAAATTGGGGTGGAATTGGAATCTGGAGAGGTCAAAGAAAGTAGAGTTCTAGTCTCAGTGATCTCCATTTTTTATTACTGGGAATTTGGGTCTGAACATGCTACATCCCAATTTTCTAGAGACTTTCTTTCTCTCACACAAAATTATCTTTTCCCCTACTTTTTAAGTTGGTGTGGGTGAGAATCTGCTGCCTGAGAAAAAAGAGGGGGGAAAAAAGAACTTCTGTCAAGAATCCAATTCCCTCTCTCTTTTCCTAAGTTTGGCTTTGTGGGGATTTGTTCATAGCTGTTGCATCTTTTTCTCTAGAAAGTTAAATTTGTAGATAATATAATCTACATGACCAAATACTGTGATTAAATACATCATTTTGGATAAAAATCTTCCTATGGGTAAATTTTTTTGACAGTAAAACTTCACTTTTACCTCCCTGTTTCAAAACAGTGGAGTAGATCCAGAACCCTCTCATTGATAATGTCTAAAAGACTAAAACCACTTCTTTTAACAGTGCTTTGCCTACTAAAAGAATGCAAGCTGTCTGATGTTGATATGACTTTTTTGTGTCATATTTGCCCTCTTCTTCTCCAAGATATAATTCCATTGTTGAGACACCTATCTTCTAGATTTGCTTTAATTTTTGATGATCCATATTTGCTTCCTTTTTATGTCCAATTACAAATTTTACCTTTGAAGTTTCCATGAATGACAATGACATTAAAACCAATTTCCCTTTCCCTTTCCCCTCTCTGTTTTTTCTCTGTTTCAGTGGCACAGGAACCCCCACCACAACCCCAACCAGCACCACCCCAGCGACCACCATGCCCGGCACCACGCCGGGAACCACCACAAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCACCACCTCCCCCTCGGTGTTTGGCAGTGGGATAAGCCCAACGGGTGGCGTTGGGAGCAGTGGGAATAGCATTGATGGAAGTGCTGCTGCAGCTCTCACTGCAGCAGCCTCTAATTTCTTGTTCTTCACAGCCACTGTGGCGTTTTGGTTGTCGCTCTTCTTT

mRNA sequence

CTAACTGTTGTCCTCCATTGTTGCAAAACTTCTTTTTCTTCTTCCTCAGGCGCGACCTATTGTGTTTGTAAGGATGGGCAAAGCGATCAAGCCCTTCAGAAGAGTCTGGATTATGCCTGTGGAGCTGGAGCCGATTGCACTCCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACCGTAAAGGATCACTGTAGCTATGCCGTTAACAGCTATTTTCAGAGGAAGGGTCAGGTTCAGGGTAGCTGTGATTTCTCAGGAACTGCCACGCCTAGCCCGTCTCCTCCTGGTATTACACCTTCTATTTCAGCTTCTTCATCAACTGTTTTTGGCACAGGAACCCCCACCACAACCCCAACCAGCACCACCCCAGCGACCACCATGCCCGGCACCACGCCGGGAACCACCACAAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCACCACCTCCCCCTCGGTGTTTGGCAGTGGGATAAGCCCAACGGGTGGCGTTGGGAGCAGTGGGAATAGCATTGATGGAAGTGCTGCTGCAGCTCTCACTGCAGCAGCCTCTAATTTCTTGTTCTTCACAGCCACTGTGGCGTTTTGGTTGTCGCTCTTCTTT

Coding sequence (CDS)

CTAACTGTTGTCCTCCATTGTTGCAAAACTTCTTTTTCTTCTTCCTCAGGCGCGACCTATTGTGTTTGTAAGGATGGGCAAAGCGATCAAGCCCTTCAGAAGAGTCTGGATTATGCCTGTGGAGCTGGAGCCGATTGCACTCCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACCGTAAAGGATCACTGTAGCTATGCCGTTAACAGCTATTTTCAGAGGAAGGGTCAGGTTCAGGGTAGCTGTGATTTCTCAGGAACTGCCACGCCTAGCCCGTCTCCTCCTGGTATTACACCTTCTATTTCAGCTTCTTCATCAACTGTTTTTGGCACAGGAACCCCCACCACAACCCCAACCAGCACCACCCCAGCGACCACCATGCCCGGCACCACGCCGGGAACCACCACAAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCACCACCTCCCCCTCGGTGTTTGGCAGTGGGATAAGCCCAACGGGTGGCGTTGGGAGCAGTGGGAATAGCATTGATGGAAGTGCTGCTGCAGCTCTCACTGCAGCAGCCTCTAATTTCTTGTTCTTCACAGCCACTGTGGCGTTTTGGTTGTCGCTCTTCTTT

Protein sequence

LTVVLHCCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFLFFTATVAFWLSLFF

Homology

[Close]

BLAST of MS001009 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia])

HSP 1 Score: 318.5 bits (815), Expect = 4.1e-83
Identity = 178/195 (91.28%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+  S ATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPP-GITPSISASSSTVFGTGTPTTTPTSTTPATTMP 130
           SYFQRKGQVQGSCDFSGTATPSPSPP G +  +  SS +  GTGTPTTTPTSTTPATTMP
Sbjct: 73  SYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSPS--GTGTPTTTPTSTTPATTMP 132

Query: 131 GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF 190
           GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF
Sbjct: 133 GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF 192

Query: 191 LFFTATVAFWLSLFF 205
           LFFTATVAFWLSLFF
Sbjct: 193 LFFTATVAFWLSLFF 205

[Close]

BLAST of MS001009 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-72
Identity = 156/193 (80.83%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPC+QPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA+PS SPP +       SS  F TGTPT+T  STTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSF-TGTPTSTTPSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFG+GISPTGGVG  GNS+DGSAAA L AAASN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLGGNSMDGSAAAGLNAAASNLF 192

Query: 191 FFTATVAFWLSLF 204
           FFTATV FWLS+F
Sbjct: 193 FFTATVTFWLSMF 204

[Close]

BLAST of MS001009 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 277.7 bits (709), Expect = 8.0e-71
Identity = 154/193 (79.79%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADC+ ILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA PS SPP +       SS  F TGTPTTT  STTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF-TGTPTTTTPSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFG GISPTGGVG  GN++DGSAAA L AAASN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGGGISPTGGVGLGGNTMDGSAAAGLNAAASNLF 192

Query: 191 FFTATVAFWLSLF 204
           FFTATV FW S+F
Sbjct: 193 FFTATVTFWFSMF 204

[Close]

BLAST of MS001009 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-69
Identity = 153/193 (79.27%), Postives = 161/193 (83.42%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADCT ILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTAILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA PS SPP +       SS  F     T TPTSTTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF-----TGTPTSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFGSGISPTGGVG  GNS+DGSAAA L AA SN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGSGISPTGGVGLGGNSMDGSAAAGLNAAVSNLF 192

Query: 191 FFTATVAFWLSLF 204
           FF ATV FWLS+F
Sbjct: 193 FFIATVTFWLSVF 200

[Close]

BLAST of MS001009 vs. NCBI nr
Match: XP_023546942.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-61
Identity = 144/195 (73.85%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S A+YC+CKDGQSDQALQK+LDYACGAGADCTPILQNGPCFQPNT+KDHCSYAVN
Sbjct: 13  AFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTIKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA  S SPP     + AS      + + T TPTSTTP TT+P 
Sbjct: 73  SYFQRKGQVQGSCDFSGTAMLSQSPP-----VEASGCVYSSSSSNTGTPTSTTPFTTVPS 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTG--GVGSSGNSIDGSAAAALTAAASN 190
           TT GTTTNPST PPST    TTSPSVFGSGISPTG  G G SGN++DGSAAA LTAAA N
Sbjct: 133 TTLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGSAAAGLTAAAFN 192

Query: 191 FLFFTATVAFWLSLF 204
             FFTATV FW S+F
Sbjct: 193 LFFFTATVTFWWSMF 198

[Close]

BLAST of MS001009 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 84/153 (54.90%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           + +  S  T+CVCK+G S+  LQK+LDYACGAGADC PI Q GPCF PNTVK HCSYAVN
Sbjct: 12  AMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVN 71

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           S+FQ+KGQ  G+CDF+GTAT S S P  T     +S+    +G+ TTTP +TTP+T +P 
Sbjct: 72  SFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASA----SGSGTTTPVTTTPSTRVP- 131

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISP 164
               TTTN   T P T+TP T       SGI+P
Sbjct: 132 ----TTTN---TRPYTITPSTGGGLGIPSGINP 152

[Close]

BLAST of MS001009 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.4e-24
Identity = 79/171 (46.20%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 7   CCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCS 66
           C   S  + S A YC+CK+G ++Q LQK++DYACG GADCT I   G C+QPNTVK+HC 
Sbjct: 8   CLIISMFTYSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPNTVKNHCD 67

Query: 67  YAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITPS--ISASSSTVFGTGTPTT-TPTSTT 126
            AVNSY+Q+K     +CDF+G A+PS +PP    +    +SSS    TGTPTT TPTS T
Sbjct: 68  VAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTGTPTTGTPTSGT 127

Query: 127 PATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSV-FGSGISPTGGVGSSGNS 174
           P T  P T   TT  P++  P++  P T +P+    +G+  + G+ +S +S
Sbjct: 128 PTTGTPTTGTPTTGTPTSGTPTSGFPNTGTPNTGTNTGMPNSNGMPTSSSS 177

[Close]

BLAST of MS001009 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 84/197 (42.64%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 3   VVLHCCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 62
           +VL     S +  S A++CVCK G SD  LQ +LDYACG GADC P      CF P+ V+
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 63  DHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITP---SISASSSTVFGTGTP-TTT 122
            HC+YAVNS+FQ+KGQ  GSC+F GTATP+ S P  T      SAS S+   T TP TT 
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 123 PTSTTPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSA 182
           P  +   TT+PG+  GT +  S  P + +  G ++    G+GI+P     SS  ++  S+
Sbjct: 124 PKGSPTTTTLPGS--GTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFALKNSS 183

Query: 183 ---AAALTAAASNFLFF 193
                 L  A+S F  F
Sbjct: 184 KLFICLLLIASSGFCSF 198

[Close]

BLAST of MS001009 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-19
Identity = 75/186 (40.32%), Postives = 105/186 (56.45%), Query Frame = 0


Query: 3   VVLHCCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 62
           +VL+      +  + A++CVCK G SD  LQK+LDYACG GADC P    G CF P+ V+
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 63  DHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITP-SISASSSTVFGTGTPTTTPTS 122
            HC+YAVNS+FQ+KGQ   SC+F+GTAT + + P  T  +  +S+S   G+G+ T TP  
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123

Query: 123 TTPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAA 182
            +P  +   TT     +P +  PST   G       G+G++P     SSG ++  S    
Sbjct: 124 NSPKGSNSITTFPGGNSPYSGTPSTGLLGGNITDATGTGLNPDYSTESSGFALYYSNNLL 183

Query: 183 LTAAAS 188
           LT   S
Sbjct: 184 LTGFCS 189

[Close]

BLAST of MS001009 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.9e-16
Identity = 77/183 (42.08%), Postives = 99/183 (54.10%), Query Frame = 0


Query: 16  SGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVNSYFQR 75
           S A  CVCKD  ++  LQK +D+ACG GADC  I   G C+QPNT+K+HC  AVNSY+Q+
Sbjct: 17  SNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQPNTLKNHCDVAVNSYYQK 76

Query: 76  KGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATT-MPGTTPG 135
           K     +CDF+G A  S SPP  T S  +SSS+    GTPT    ST  +TT  PGTT  
Sbjct: 77  KASTGATCDFNGAAVISTSPPSTTSSCLSSSSS---NGTPTAGYPSTGNSTTASPGTTNP 136

Query: 136 TTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFLFFTA 195
           +T N + +   T    T+S   F    S T G  SS  S D +    L+   +  +  T 
Sbjct: 137 STGNSTNSTLPTNDKPTSSTITFPD--STTMG-PSSSTSGDPNGGEELSVRTTTIILLTT 192

Query: 196 TVA 198
             A
Sbjct: 197 IAA 192

[Close]

BLAST of MS001009 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 178/195 (91.28%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+  S ATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPP-GITPSISASSSTVFGTGTPTTTPTSTTPATTMP 130
           SYFQRKGQVQGSCDFSGTATPSPSPP G +  +  SS +  GTGTPTTTPTSTTPATTMP
Sbjct: 73  SYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSPS--GTGTPTTTPTSTTPATTMP 132

Query: 131 GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF 190
           GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF
Sbjct: 133 GTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNF 192

Query: 191 LFFTATVAFWLSLFF 205
           LFFTATVAFWLSLFF
Sbjct: 193 LFFTATVAFWLSLFF 205

[Close]

BLAST of MS001009 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.0e-73
Identity = 156/193 (80.83%), Postives = 168/193 (87.05%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPC+QPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA+PS SPP +       SS  F TGTPT+T  STTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSF-TGTPTSTTPSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFG+GISPTGGVG  GNS+DGSAAA L AAASN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLGGNSMDGSAAAGLNAAASNLF 192

Query: 191 FFTATVAFWLSLF 204
           FFTATV FWLS+F
Sbjct: 193 FFTATVTFWLSMF 204

[Close]

BLAST of MS001009 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.9e-71
Identity = 154/193 (79.79%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADC+ ILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA PS SPP +       SS  F TGTPTTT  STTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF-TGTPTTTTPSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFG GISPTGGVG  GN++DGSAAA L AAASN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGGGISPTGGVGLGGNTMDGSAAAGLNAAASNLF 192

Query: 191 FFTATVAFWLSLF 204
           FFTATV FW S+F
Sbjct: 193 FFTATVTFWFSMF 204

[Close]

BLAST of MS001009 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.9e-71
Identity = 154/193 (79.79%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           +F+S S ATYC+CKDG SDQALQKSLDYACGAGADC+ ILQNGPCFQPNTVKDHCSYAVN
Sbjct: 13  AFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQPNTVKDHCSYAVN 72

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQRKGQVQGSCDFSGTA PS SPP +       SS  F TGTPTTT  STTP+TT+PG
Sbjct: 73  SYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF-TGTPTTTTPSTTPSTTIPG 132

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSAAAALTAAASNFL 190
           TTPGTTTNPSTTPPST TPGTTSPSVFG GISPTGGVG  GN++DGSAAA L AAASN  
Sbjct: 133 TTPGTTTNPSTTPPSTTTPGTTSPSVFGGGISPTGGVGLGGNTMDGSAAAGLNAAASNLF 192

Query: 191 FFTATVAFWLSLF 204
           FFTATV FW S+F
Sbjct: 193 FFTATVTFWFSMF 204

[Close]

BLAST of MS001009 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.7e-61
Identity = 143/203 (70.44%), Postives = 159/203 (78.33%), Query Frame = 0


Query: 3   VVLHCCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 62
           ++ H    +F+S S A+YC+CKDGQSDQALQK+LDYACGAGADCTPILQNGPCFQPNT+K
Sbjct: 5   LLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQPNTIK 64

Query: 63  DHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTST 122
           DHCSYAVNSYFQRKGQVQGSCDFSGTA  S SPP     + AS      + + T TPTST
Sbjct: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPP-----VEASGCVYSSSSSNTGTPTST 124

Query: 123 TPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTG--GVGSSGNSIDGSAAA 182
           TP+TT+P  T GTTTNPST PPST    TTSPSVFGSGISPTG  G G SGN++DGSAAA
Sbjct: 125 TPSTTVPSATLGTTTNPSTPPPST----TTSPSVFGSGISPTGSVGFGGSGNNMDGSAAA 184

Query: 183 ALTAAASNFLFFTATVAFWLSLF 204
            LTAAA N  FF ATV FW S+F
Sbjct: 185 GLTAAAFNLFFFAATVTFWWSMF 198

[Close]

BLAST of MS001009 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 84/153 (54.90%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           + +  S  T+CVCK+G S+  LQK+LDYACGAGADC PI Q GPCF PNTVK HCSYAVN
Sbjct: 12  AMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVN 71

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           S+FQ+KGQ  G+CDF+GTAT S S P  T     +S+    +G+ TTTP +TTP+T +P 
Sbjct: 72  SFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASA----SGSGTTTPVTTTPSTRVP- 131

Query: 131 TTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISP 164
               TTTN   T P T+TP T       SGI+P
Sbjct: 132 ----TTTN---TRPYTITPSTGGGLGIPSGINP 152

[Close]

BLAST of MS001009 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-27
Identity = 88/184 (47.83%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           S ++SS A YC+CKDG  D  LQ S+DYACG  ADC PI   G C+QP+T+K HC +AVN
Sbjct: 12  SLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTIKSHCDWAVN 71

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPGITPSISASSSTVFGTGTPTTTPTSTTPATTMPG 130
           SYFQ   QV GSC+FSGTAT +P+P    PS  A+      + + T +P STTP T   G
Sbjct: 72  SYFQNAAQVPGSCNFSGTATTNPNP----PSNLANGCIYPSSPSSTRSPPSTTPPT---G 131

Query: 131 TTP--GTTTNPSTTPPSTMTPGTTSPSVFG-SGISPTGGVGSSGNSIDGSAAAALTAAAS 190
           TTP  GTT  P T  P T  PGT  P VFG +G+      GS  +S+  S+   L  +  
Sbjct: 132 TTPTNGTTPFPGTPFPGTPFPGT--PPVFGPTGVFNPSNPGSGASSLGTSSVFTLCFSLL 186

Query: 191 NFLF 192
            FL+
Sbjct: 192 AFLW 186

[Close]

BLAST of MS001009 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 )

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-25
Identity = 79/171 (46.20%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 7   CCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCS 66
           C   S  + S A YC+CK+G ++Q LQK++DYACG GADCT I   G C+QPNTVK+HC 
Sbjct: 8   CLIISMFTYSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPNTVKNHCD 67

Query: 67  YAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITPS--ISASSSTVFGTGTPTT-TPTSTT 126
            AVNSY+Q+K     +CDF+G A+PS +PP    +    +SSS    TGTPTT TPTS T
Sbjct: 68  VAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSSSSGTPTTGTPTTGTPTSGT 127

Query: 127 PATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSV-FGSGISPTGGVGSSGNS 174
           P T  P T   TT  P++  P++  P T +P+    +G+  + G+ +S +S
Sbjct: 128 PTTGTPTTGTPTTGTPTSGTPTSGFPNTGTPNTGTNTGMPNSNGMPTSSSS 177

[Close]

BLAST of MS001009 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.6e-24
Identity = 65/136 (47.79%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 11  SFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVKDHCSYAVN 70
           + ++ S ATYC+C+DG  ++ LQ S+DYACG   DC PI + GPC+QPNT+K HC +AVN
Sbjct: 12  ALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTIKSHCDWAVN 71

Query: 71  SYFQRKGQVQGSCDFSGTATPSPSPPG------ITPSISASSSTVFGTGTPTTTPTSTTP 130
           +YFQR GQ+ GSC+FSGTAT S + P       + PS   S+ T   TGTP+ T T   P
Sbjct: 72  TYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSPGSAGTTPTTGTPSGTQTFPGP 131

Query: 131 ATTMPGTTPGTTTNPS 141
               P   P    +PS
Sbjct: 132 ----PAFGPAGDFDPS 143

[Close]

BLAST of MS001009 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 104.8 bits (260), Expect = 8.6e-23
Identity = 84/197 (42.64%), Postives = 111/197 (56.35%), Query Frame = 0


Query: 3   VVLHCCKTSFSSSSGATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQPNTVK 62
           +VL     S +  S A++CVCK G SD  LQ +LDYACG GADC P      CF P+ V+
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 63  DHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPGITP---SISASSSTVFGTGTP-TTT 122
            HC+YAVNS+FQ+KGQ  GSC+F GTATP+ S P  T      SAS S+   T TP TT 
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 123 PTSTTPATTMPGTTPGTTTNPSTTPPSTMTPGTTSPSVFGSGISPTGGVGSSGNSIDGSA 182
           P  +   TT+PG+  GT +  S  P + +  G ++    G+GI+P     SS  ++  S+
Sbjct: 124 PKGSPTTTTLPGS--GTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFALKNSS 183

Query: 183 ---AAALTAAASNFLFF 193
                 L  A+S F  F
Sbjct: 184 KLFICLLLIASSGFCSF 198

The following BLAST results are available for this feature:

BLAST of MS001009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131475.1	4.1e-83	91.28	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]	[more]
XP_004144176.1	1.5e-72	80.83	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMO...	[more]
XP_008445454.1	8.0e-71	79.79	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA00647...	[more]
XP_038886488.1	1.5e-69	79.27	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]	[more]
XP_023546942.1	2.0e-61	73.85	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS001009 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ86	3.2e-30	54.90	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3...	[more]
Q93V72	3.4e-24	46.20	PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4...	[more]
Q9FNQ2	1.2e-21	42.64	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1...	[more]
Q9SD84	1.5e-19	40.32	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2...	[more]
Q9FZD0	9.9e-16	42.08	Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370...	[more]

BLAST of MS001009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BPT8	2.0e-83	91.28	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0KDN8	7.0e-73	80.83	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=...	[more]
A0A5A7V8S9	3.9e-71	79.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BDH0	3.9e-71	79.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1HDW5	4.7e-61	70.44	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS001009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18650.1	2.3e-31	54.90	plasmodesmata callose-binding protein 3	[more]
AT1G13830.1	7.5e-27	47.83	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G69295.1	2.4e-25	46.20	plasmodesmata callose-binding protein 4	[more]
AT2G03505.1	4.6e-24	47.79	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G61130.1	8.6e-23	42.64	plasmodesmata callose-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 19..102 e-value: 7.8E-36 score: 135.0
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 20..90 e-value: 1.4E-21 score: 76.9
None	No IPR available	GENE3D	1.20.58.1040		coord: 7..111 e-value: 1.4E-9 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..164
None	No IPR available	PANTHER	PTHR31044:SF95	PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1	coord: 11..201
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 11..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001009.1	MS001009.1	mRNA