MS000989 (gene) Bitter gourd (TR) v1

Overview


Name	MS000989
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MYND-type domain-containing protein
Location	scaffold36: 653857 .. 655210 (-)
RNA-Seq Expression	MS000989
Synteny	MS000989

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACAACAAGAGGCCTGCAATTACCCACTATCACCATTATTGTTCTTCCCCCAAGAGAATCAGAAAATCTGATTTTTTTGACTCCTTGCCCGACGATCTTGTTCTCTCTGTTCTCTCTAAACTTTGCTCCACTGCCTCTTCCCCTTCCGATTTCATCGCCGCTTTGATTACGTGCGTACCCTCCTCCCGCCTCCCTCTTCTACTTCTTTTTTATGCAACGCCCATCAACTTAAATAAATTCATAATGATTTCAACTGGGTTTTTTGTTTGATTGGAATTTGGTGTGTGGTGTGTAACAGATGCAAGAGACTCAACGATTTGGGGCGTCATTCGCTTGTGTTATCCACAGCTTCTCAAAGAACTTTGGCAATTGGGGCTAAGAACTGGTCGGAATCTGCTCACCGGTTCCTCAAACAGTGTGTTGACGCCGGCAACGTCGAGGCTTGCTATATTCTCGGCATGGTAATTAAACGAGGACCTGTCCTTTATAAAAAAAAATGGAAAATGGAAAATTGTTTTGTTTTGTTTGGCAGCGATGAGCCTGGAATTATATTGTCGTTTGTTTTTCTATCTTTGCTCAGATTCGGTTTTACTGTCTGCAAAACCGAGGGAGCGGAGCTTCTCTCATGGCGAAGGCGGCGATTGGCTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATACAGTTCAACGGCAGCGGGGGCTCTAAGAACGATAAGGATTTGAGAGCCGGCGTGGCTCTTTGTGCCAGAGCCGCCTTTCTCGGCCACATCGACGCCCTACGGGAGCTTGGGCATTGCCTCCAAGATGGCTATGGAGTCTGCCAGAACGTCGTGGAGGGACGGCGATTTCTCGTCCAAGCCAACGCGCGGGAACTCGCCGCCGTGCTGTCATCGACGGCTTCCACCGGCGCCGCGGCGCGTTCTTGGGTCACGTGCAACCCGCAACCGCACCACCGGGCGATCGCGGCGGGGGGGTCTTCCGAGTGCCCGTTGCTGAGCGATTTCGGGTGCAACGTGCCGGCGGCGGAGGCGCACCCGGCGAGTCGATTTATGGCGGAGTGGTTCGCCATTCGGGGCGGCGCGCAGGGGCCAGGGCTGAGGCTTTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACGAGGAGGCACGAGTTTCGTCGATGTTCTGTTTGTGGGATCGTCAACTACTGCTCACGCGCTTGCCAGGCACTTGATTGGAAGCTGCAGCATAAAGCAGAATGCGCGCCGCTGGAGATGTGGCCGGAAAACGACGGGGAAGTGGCCAACGGCGACGGCGACGGAGGAGTTGTAAATGACAGCGACGGTGAGGACGTAATCGTCGGGGAGAGT

mRNA sequence

ATGAAGAACAACAAGAGGCCTGCAATTACCCACTATCACCATTATTGTTCTTCCCCCAAGAGAATCAGAAAATCTGATTTTTTTGACTCCTTGCCCGACGATCTTGTTCTCTCTGTTCTCTCTAAACTTTGCTCCACTGCCTCTTCCCCTTCCGATTTCATCGCCGCTTTGATTACATGCAAGAGACTCAACGATTTGGGGCGTCATTCGCTTGTGTTATCCACAGCTTCTCAAAGAACTTTGGCAATTGGGGCTAAGAACTGGTCGGAATCTGCTCACCGGTTCCTCAAACAGTGTGTTGACGCCGGCAACGTCGAGGCTTGCTATATTCTCGGCATGATTCGGTTTTACTGTCTGCAAAACCGAGGGAGCGGAGCTTCTCTCATGGCGAAGGCGGCGATTGGCTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATACAGTTCAACGGCAGCGGGGGCTCTAAGAACGATAAGGATTTGAGAGCCGGCGTGGCTCTTTGTGCCAGAGCCGCCTTTCTCGGCCACATCGACGCCCTACGGGAGCTTGGGCATTGCCTCCAAGATGGCTATGGAGTCTGCCAGAACGTCGTGGAGGGACGGCGATTTCTCGTCCAAGCCAACGCGCGGGAACTCGCCGCCGTGCTGTCATCGACGGCTTCCACCGGCGCCGCGGCGCGTTCTTGGGTCACGTGCAACCCGCAACCGCACCACCGGGCGATCGCGGCGGGGGGGTCTTCCGAGTGCCCGTTGCTGAGCGATTTCGGGTGCAACGTGCCGGCGGCGGAGGCGCACCCGGCGAGTCGATTTATGGCGGAGTGGTTCGCCATTCGGGGCGGCGCGCAGGGGCCAGGGCTGAGGCTTTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACGAGGAGGCACGAGTTTCGTCGATGTTCTGTTTGTGGGATCGTCAACTACTGCTCACGCGCTTGCCAGGCACTTGATTGGAAGCTGCAGCATAAAGCAGAATGCGCGCCGCTGGAGATGTGGCCGGAAAACGACGGGGAAGTGGCCAACGGCGACGGCGACGGAGGAGTTGTAAATGACAGCGACGGTGAGGACGTAATCGTCGGGGAGAGT

Coding sequence (CDS)

ATGAAGAACAACAAGAGGCCTGCAATTACCCACTATCACCATTATTGTTCTTCCCCCAAGAGAATCAGAAAATCTGATTTTTTTGACTCCTTGCCCGACGATCTTGTTCTCTCTGTTCTCTCTAAACTTTGCTCCACTGCCTCTTCCCCTTCCGATTTCATCGCCGCTTTGATTACATGCAAGAGACTCAACGATTTGGGGCGTCATTCGCTTGTGTTATCCACAGCTTCTCAAAGAACTTTGGCAATTGGGGCTAAGAACTGGTCGGAATCTGCTCACCGGTTCCTCAAACAGTGTGTTGACGCCGGCAACGTCGAGGCTTGCTATATTCTCGGCATGATTCGGTTTTACTGTCTGCAAAACCGAGGGAGCGGAGCTTCTCTCATGGCGAAGGCGGCGATTGGCTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCATACAGTTCAACGGCAGCGGGGGCTCTAAGAACGATAAGGATTTGAGAGCCGGCGTGGCTCTTTGTGCCAGAGCCGCCTTTCTCGGCCACATCGACGCCCTACGGGAGCTTGGGCATTGCCTCCAAGATGGCTATGGAGTCTGCCAGAACGTCGTGGAGGGACGGCGATTTCTCGTCCAAGCCAACGCGCGGGAACTCGCCGCCGTGCTGTCATCGACGGCTTCCACCGGCGCCGCGGCGCGTTCTTGGGTCACGTGCAACCCGCAACCGCACCACCGGGCGATCGCGGCGGGGGGGTCTTCCGAGTGCCCGTTGCTGAGCGATTTCGGGTGCAACGTGCCGGCGGCGGAGGCGCACCCGGCGAGTCGATTTATGGCGGAGTGGTTCGCCATTCGGGGCGGCGCGCAGGGGCCAGGGCTGAGGCTTTGTTCGCACGTGGGGTGTGGGCGGCCGGAGACGAGGAGGCACGAGTTTCGTCGATGTTCTGTTTGTGGGATCGTCAACTACTGCTCACGCGCTTGCCAGGCACTTGATTGGAAGCTGCAGCATAAAGCAGAATGCGCGCCGCTGGAGATGTGGCCGGAAAACGACGGGGAAGTGGCCAACGGCGACGGCGACGGAGGAGTTGTAAATGACAGCGACGGTGAGGACGTAATCGTCGGGGAGAGT

Protein sequence

MKNNKRPAITHYHHYCSSPKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES

Homology

[Close]

BLAST of MS000989 vs. NCBI nr
Match: XP_023002802.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 622.9 bits (1605), Expect = 1.8e-174
Identity = 310/372 (83.33%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL + ASSPSDFI+
Sbjct: 31  KRASQTNLQYFSGSPKRKRFSPPRSSAAVSDFFQSLPDDLLISILSKLSANASSPSDFIS 90

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 91  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 150

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 151 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 210

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA  +TG AARSWVTC+
Sbjct: 211 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATATGGAARSWVTCD 270

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 271 PHTHHRA-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 330

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   GDGDG
Sbjct: 331 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGDGDG 390

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 391 GVQNENEAEDVI 401

[Close]

BLAST of MS000989 vs. NCBI nr
Match: KAG7020146.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 616.7 bits (1589), Expect = 1.3e-172
Identity = 309/372 (83.06%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+
Sbjct: 7   KRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFIS 66

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 67  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 126

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 127 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 186

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+
Sbjct: 187 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCD 246

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 247 PHTHHRA-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 306

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+G
Sbjct: 307 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGE--GGVGEG 366

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 367 GVENENEAEDVI 375

[Close]

BLAST of MS000989 vs. NCBI nr
Match: XP_022951094.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 616.7 bits (1589), Expect = 1.3e-172
Identity = 309/372 (83.06%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+
Sbjct: 31  KRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFIS 90

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 91  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 150

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 151 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 210

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+
Sbjct: 211 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCD 270

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 271 PHTHHRA-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 330

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+G
Sbjct: 331 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGE--GGVGEG 390

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 391 GVENENEAEDVI 399

[Close]

BLAST of MS000989 vs. NCBI nr
Match: XP_023537715.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 615.1 bits (1585), Expect = 3.8e-172
Identity = 308/372 (82.80%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+
Sbjct: 7   KRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFIS 66

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 67  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 126

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 127 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 186

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+
Sbjct: 187 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCD 246

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHR  A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 247 PHTHHRT-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 306

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+G
Sbjct: 307 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGE--GGVGEG 366

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 367 GVENENEAEDVI 375

[Close]

BLAST of MS000989 vs. NCBI nr
Match: XP_038885404.1 (F-box protein At1g67340-like [Benincasa hispida])

HSP 1 Score: 614.4 bits (1583), Expect = 6.5e-172
Identity = 307/357 (85.99%), Postives = 326/357 (91.32%), Query Frame = 0


Query: 17  SSPKRIR----KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLV 76
           SS KR R    KSDFFDSLPDDL++S+LSKL S+ASSPSDFI  LITCKR N+LGRHSLV
Sbjct: 25  SSFKRNRCFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKPLITCKRFNNLGRHSLV 84

Query: 77  LSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKA 136
           LS ASQRTL I AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKA
Sbjct: 85  LSKASQRTLGINAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKA 144

Query: 137 AIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG 196
           AI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG
Sbjct: 145 AISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYG 204

Query: 197 VCQNVVEGRRFLVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLL 256
           VCQN++EGRRFLVQANARELAAVLSS ++ GA +RSWVTCNP  HHR  A G S+ECPLL
Sbjct: 205 VCQNIMEGRRFLVQANARELAAVLSS-STAGAGSRSWVTCNPIAHHRT-AVGSSAECPLL 264

Query: 257 SDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGI 316
           SDFGCNVPA EAHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGI
Sbjct: 265 SDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGI 324

Query: 317 VNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES 370
           VNYCSRACQALDWKLQHKAECAPLE+WPENDG+    +GDGG++N++D EDVI GES
Sbjct: 325 VNYCSRACQALDWKLQHKAECAPLEIWPENDGDGGEANGDGGILNENDDEDVI-GES 378

[Close]

BLAST of MS000989 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.6e-134
Identity = 240/350 (68.57%), Postives = 279/350 (79.71%), Query Frame = 0


Query: 19  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQ 78
           P+    +D  DS+PDDLV+S+L KL ST+  P+DFI  L+TCKRL  L  + +VLS  S 
Sbjct: 35  PENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 94

Query: 79  RTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHA 138
           + +A+ A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+GASLMAKAAI SHA
Sbjct: 95  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHA 154

Query: 139 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVV 198
           PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV 
Sbjct: 155 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVS 214

Query: 199 EGRRFLVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCN 258
           EGRRFLVQANARELAAVLSS    G  ARS      QP    +   G   CPLLSDFGCN
Sbjct: 215 EGRRFLVQANARELAAVLSS----GIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCN 274

Query: 259 VPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS 318
           VPA E HPA+RF+A+WFA+RGG   G GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCS
Sbjct: 275 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 334

Query: 319 RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV 367
           RACQALDWKL+HK +CAP++ W  E DG    G+G+  +  + +G++V++
Sbjct: 335 RACQALDWKLRHKMDCAPVQRWLEEGDG----GEGNVQIDGNGNGDNVLL 376

[Close]

BLAST of MS000989 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-107
Identity = 201/339 (59.29%), Postives = 247/339 (72.86%), Query Frame = 0


Query: 25  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIG 84
           ++ F+ L DDL++S+L KL ++ASSPSDF+  L TCKRLN LG H LVLS A  +TLA+ 
Sbjct: 19  NNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVT 78

Query: 85  AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSL 144
           A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL
Sbjct: 79  AEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSL 138

Query: 145 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFL 204
           +VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V EGRR L
Sbjct: 139 SVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLL 198

Query: 205 VQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEA 264
           +QANARELA  L S                   + ++ +G  +E   L+D    VP  E 
Sbjct: 199 IQANARELACSLRS-------------------YLSLKSGDENE--TLTDLSV-VPVQEI 258

Query: 265 HPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD 324
           HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALD
Sbjct: 259 HPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALD 318

Query: 325 WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE 363
           W+ +HK EC PL++W     E+  +G+     ++D+ GE
Sbjct: 319 WRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDDNHGE 335

[Close]

BLAST of MS000989 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 37/132 (28.03%), Postives = 58/132 (43.94%), Query Frame = 0


Query: 247 SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRR 306
           ++ P  +DF    P +E  P+    + +  ++ GA      LC   GC  P       +R
Sbjct: 98  NQLPRQNDFYSYEPPSEDPPSETGESVYLHLKSGA-----HLCRVCGCSGP-------KR 157

Query: 307 CSVCGIVNYCSRACQALDWKLQHKAECAPLE-----------MWPENDGEVANGDGDGGV 366
           CS C   +YCS+  Q+LDW+L HK  CA  +           ++PE +  +   D     
Sbjct: 158 CSRCHKAHYCSKEHQSLDWRLGHKQACAQTDNLDNIVPDHNFLFPEFEIVIETEDEIMPE 217

Query: 367 VNDSDGEDVIVG 368
           V + D E  I+G
Sbjct: 218 VVERDDESEIIG 217

[Close]

BLAST of MS000989 vs. ExPASy Swiss-Prot
Match: Q16342 (Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.4e-04
Identity = 29/88 (32.95%), Postives = 39/88 (44.32%), Query Frame = 0


Query: 247 SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRR 306
           ++ P  +DF    P +E  P     +    ++ GA      LC   GC  P+T       
Sbjct: 98  NQLPRKNDFYSYEPPSENPPPETGESVCLQLKSGA-----HLCRVCGCLGPKT------- 157

Query: 307 CSVCGIVNYCSRACQALDWKLQHKAECA 335
           CS C    YCS+  Q LDW+L HK  CA
Sbjct: 158 CSRCHKAYYCSKEHQTLDWRLGHKQACA 173

[Close]

BLAST of MS000989 vs. ExPASy Swiss-Prot
Match: Q9FPS9 (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 9.2e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 306 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 338
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of MS000989 vs. ExPASy TrEMBL
Match: A0A6J1KKI0 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111496556 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.8e-175
Identity = 310/372 (83.33%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL + ASSPSDFI+
Sbjct: 31  KRASQTNLQYFSGSPKRKRFSPPRSSAAVSDFFQSLPDDLLISILSKLSANASSPSDFIS 90

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 91  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 150

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 151 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 210

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA  +TG AARSWVTC+
Sbjct: 211 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATATGGAARSWVTCD 270

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 271 PHTHHRA-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 330

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   GDGDG
Sbjct: 331 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGEGGVGDGDG 390

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 391 GVQNENEAEDVI 401

[Close]

BLAST of MS000989 vs. ExPASy TrEMBL
Match: A0A6J1GHQ9 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111454044 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 6.3e-173
Identity = 309/372 (83.06%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 5   KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIA 64
           KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+
Sbjct: 31  KRASQTNLQYFSGSPKRRRFSPPRSSAVVSDFFQSLPDDLLISILSKLSATASSPSDFIS 90

Query: 65  ALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIR 124
           ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRFLK CVDAGNVEACYILGMIR
Sbjct: 91  ALITCKRFNNLGRHSLVLAKASQKTLAIGAKNWSESAHRFLKHCVDAGNVEACYILGMIR 150

Query: 125 FYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 184
           FYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG
Sbjct: 151 FYCLQNRGSGASLMAKAAISSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLG 210

Query: 185 HIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCN 244
           HIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+
Sbjct: 211 HIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSTAATVTGGAARSWVTCD 270

Query: 245 PQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG 304
           P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Sbjct: 271 PHTHHRA-AVGSSTECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGPPGPGLRLCSHVG 330

Query: 305 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDG 364
           CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+G
Sbjct: 331 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECSPLELWPENEGE--GGVGEG 390

Query: 365 GVVNDSDGEDVI 366
           GV N+++ EDVI
Sbjct: 391 GVENENEAEDVI 399

[Close]

BLAST of MS000989 vs. ExPASy TrEMBL
Match: A0A1S3BB38 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170
Identity = 303/346 (87.57%), Postives = 320/346 (92.49%), Query Frame = 0


Query: 24  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAI 83
           KSDFFDSLPDDL++S+LSKL S+ASSPS FI ALITCKR N LGRHSLVLS ASQRTL I
Sbjct: 23  KSDFFDSLPDDLLISILSKLASSASSPSHFINALITCKRFNHLGRHSLVLSKASQRTLGI 82

Query: 84  GAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYS 143
            AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYS
Sbjct: 83  SAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSHAPALYS 142

Query: 144 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRF 203
           LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQN++EGRRF
Sbjct: 143 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRF 202

Query: 204 LVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAE 263
           LVQANARELAAVLSS +S  AA+RSWVTCNPQ  HR  A G SSECPLLSDFGCNVPA E
Sbjct: 203 LVQANARELAAVLSSPSS--AASRSWVTCNPQAIHRT-AVGSSSECPLLSDFGCNVPAPE 262

Query: 264 AHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL 323
           AHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
Sbjct: 263 AHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL 322

Query: 324 DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES 370
           DWKLQHKAECAPLE+WPENDG+    DG+GG++N+++ EDV VGES
Sbjct: 323 DWKLQHKAECAPLEIWPENDGDDGEVDGEGGILNENEDEDV-VGES 364

[Close]

BLAST of MS000989 vs. ExPASy TrEMBL
Match: A0A0A0LMZ9 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.7e-165
Identity = 296/352 (84.09%), Postives = 315/352 (89.49%), Query Frame = 0


Query: 24  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAI 83
           K DFFDSLPDDL++S+LSKL S+ASSPS FI ALITCKR N LGRHSLVLS ASQRTL I
Sbjct: 23  KFDFFDSLPDDLLISILSKLVSSASSPSHFINALITCKRFNHLGRHSLVLSKASQRTLGI 82

Query: 84  GAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYS 143
            AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI S+APALYS
Sbjct: 83  SAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISSYAPALYS 142

Query: 144 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRF 203
           LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVCQN++EGRRF
Sbjct: 143 LAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVCQNIMEGRRF 202

Query: 204 LVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAE 263
           LVQANARELAAVLSS +S  AA+RS VTCNP   HR  A G SS+CPLLSDFGCNVPA E
Sbjct: 203 LVQANARELAAVLSSPSS--AASRSLVTCNPHAIHRT-AVGSSSDCPLLSDFGCNVPAPE 262

Query: 264 AHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL 323
           AHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
Sbjct: 263 AHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL 322

Query: 324 DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVN------DSDGEDVIVGES 370
           DWKLQHKAECAPLE+WPENDG+    DGDGG++N      D D +D ++ ES
Sbjct: 323 DWKLQHKAECAPLEIWPENDGDDVEVDGDGGILNENEEDDDEDDDDDVIEES 371

[Close]

BLAST of MS000989 vs. ExPASy TrEMBL
Match: A0A6A1WKJ1 (MYND-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR1G027847 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.3e-151
Identity = 270/354 (76.27%), Postives = 295/354 (83.33%), Query Frame = 0


Query: 18  SPKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTAS 77
           SP+   KSD FD+LPDDLV+S+L KL + +  P+DFI  L+TCKRLN LG HSLVLS AS
Sbjct: 51  SPEMTGKSDLFDALPDDLVISILCKLSAASRCPTDFINVLLTCKRLNGLGLHSLVLSRAS 110

Query: 78  QRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSH 137
           Q+T A+ AKNWSESAHRFLKQC DAGNVEACY LGMIRFYCLQNRGSGASLMAKAAI SH
Sbjct: 111 QKTFAVRAKNWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSH 170

Query: 138 APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNV 197
           A ALYSLAV+QFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV QN+
Sbjct: 171 AQALYSLAVVQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNI 230

Query: 198 VEGRRFLVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGC 257
            EGRRFLVQANARELAAV+SS A +G   RSW T NP PH R +  GG   CPLLSDFGC
Sbjct: 231 AEGRRFLVQANARELAAVISSAAGSGVPTRSWFTWNPHPHPRNMNCGG---CPLLSDFGC 290

Query: 258 NVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS 317
           NVPA EAHPASRFMAEWF+ R G+ GPGLRLCSHVGCGRPETRRHEFRRCSVCG VNYCS
Sbjct: 291 NVPAPEAHPASRFMAEWFSSRAGSPGPGLRLCSHVGCGRPETRRHEFRRCSVCGTVNYCS 350

Query: 318 RACQALDWKLQHKAECAPLEMWPENDGE------VANGDGDGGVVNDSDGEDVI 366
           RACQALDWK++HKA+C P E W + DG+      V  G+GDGGV  ++  EDVI
Sbjct: 351 RACQALDWKMRHKADCTPTERWVDEDGDGEGNGNVDAGEGDGGVFGNN--EDVI 399

[Close]

BLAST of MS000989 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 478.8 bits (1231), Expect = 4.0e-135
Identity = 240/350 (68.57%), Postives = 279/350 (79.71%), Query Frame = 0


Query: 19  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQ 78
           P+    +D  DS+PDDLV+S+L KL ST+  P+DFI  L+TCKRL  L  + +VLS  S 
Sbjct: 35  PENTTGADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 94

Query: 79  RTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHA 138
           + +A+ A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+GASLMAKAAI SHA
Sbjct: 95  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHA 154

Query: 139 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVV 198
           PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV 
Sbjct: 155 PALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVS 214

Query: 199 EGRRFLVQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCN 258
           EGRRFLVQANARELAAVLSS    G  ARS      QP    +   G   CPLLSDFGCN
Sbjct: 215 EGRRFLVQANARELAAVLSS----GIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCN 274

Query: 259 VPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS 318
           VPA E HPA+RF+A+WFA+RGG   G GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCS
Sbjct: 275 VPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCS 334

Query: 319 RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV 367
           RACQALDWKL+HK +CAP++ W  E DG    G+G+  +  + +G++V++
Sbjct: 335 RACQALDWKLRHKMDCAPVQRWLEEGDG----GEGNVQIDGNGNGDNVLL 376

[Close]

BLAST of MS000989 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 391.3 bits (1004), Expect = 8.3e-109
Identity = 201/339 (59.29%), Postives = 247/339 (72.86%), Query Frame = 0


Query: 25  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIG 84
           ++ F+ L DDL++S+L KL ++ASSPSDF+  L TCKRLN LG H LVLS A  +TLA+ 
Sbjct: 19  NNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVT 78

Query: 85  AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSL 144
           A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  SGASLMAKAAI SHAPALYSL
Sbjct: 79  AEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSL 138

Query: 145 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFL 204
           +VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V EGRR L
Sbjct: 139 SVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLL 198

Query: 205 VQANARELAAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEA 264
           +QANARELA  L S                   + ++ +G  +E   L+D    VP  E 
Sbjct: 199 IQANARELACSLRS-------------------YLSLKSGDENE--TLTDLSV-VPVQEI 258

Query: 265 HPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD 324
           HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALD
Sbjct: 259 HPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALD 318

Query: 325 WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE 363
           W+ +HK EC PL++W     E+  +G+     ++D+ GE
Sbjct: 319 WRAKHKVECTPLDLWVAAAAEIGDDGEAVAVEIDDNHGE 335

[Close]

BLAST of MS000989 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 306 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 338
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of MS000989 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 306 RCSVCGIVNYCSRACQALDWKLQHKAECAPLE 338
           RCS C  V YCS  CQ + W++ HK EC P+E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of MS000989 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 44.3 bits (103), Expect = 2.5e-04
Identity = 19/40 (47.50%), Postives = 23/40 (57.50%), Query Frame = 0


Query: 294 CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC 334
           CG+  T     ++CS C  V YCS ACQ  DWK  HK +C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

The following BLAST results are available for this feature:

BLAST of MS000989 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002802.1	1.8e-174	83.33	F-box protein At1g67340-like [Cucurbita maxima]	[more]
KAG7020146.1	1.3e-172	83.06	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951094.1	1.3e-172	83.06	F-box protein At1g67340-like [Cucurbita moschata]	[more]
XP_023537715.1	3.8e-172	82.80	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
XP_038885404.1	6.5e-172	85.99	F-box protein At1g67340-like [Benincasa hispida]	[more]

BLAST of MS000989 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	5.6e-134	68.57	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.2e-107	59.29	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	2.4e-04	28.03	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q16342	5.4e-04	32.95	Programmed cell death protein 2 OS=Homo sapiens OX=9606 GN=PDCD2 PE=1 SV=2	[more]
Q9FPS9	9.2e-04	53.13	Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of MS000989 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKI0	8.8e-175	83.33	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111496556 PE=4 SV...	[more]
A0A6J1GHQ9	6.3e-173	83.06	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111454044 PE=4 ...	[more]
A0A1S3BB38	1.3e-170	87.57	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103487769 PE=4 SV=1	[more]
A0A0A0LMZ9	1.7e-165	84.09	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351550 P...	[more]
A0A6A1WKJ1	2.3e-151	76.27	MYND-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR1G0278...	[more]

BLAST of MS000989 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	4.0e-135	68.57	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	8.3e-109	59.29	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT1G17110.1	6.6e-05	53.13	ubiquitin-specific protease 15	[more]
AT1G17110.2	6.6e-05	53.13	ubiquitin-specific protease 15	[more]
AT2G24640.1	2.5e-04	47.50	ubiquitin-specific protease 19	[more]