MS000936 (gene) Bitter gourd (TR) v1

Overview


Name	MS000936
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CCT-epsilon
Location	scaffold36: 355219 .. 360565 (+)
RNA-Seq Expression	MS000936
Synteny	MS000936

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTCGCTTTCGATGAGTTTGGGAGGCCTTTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCCGGCAGAGCTGTCGCTCGTATCCTCAGGACCTCGCTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCCGATGGTGACGTTACAATAAGTCAGTCTCACTCACTCCTTGTTCTTGTTTCTCTTAGTCTTTTAGCTTTCTTCAATGGAATTTTAGAACCCTGAGCGTGTCCCTTGTTTGAATCTGGACAGTGCATATTAAACGACTACAGGTGGTACTCGAAAGTGGACATGCTGCTATACTCGTGTTTTTGTTTTTAAATTTCATTGATCTCCTATTGGTTTCTTTGCTCGCTTTTGCTGGTCTGTAACTTTGTGATGTTTCATTTCTGAATCTGAACGATTGTAGACAAACAATCATGAAGTTAGCTGAGATATTGTCGATAGTAAATGTAAGTTCGAAGACAAAGAAATTAGTTAGACTATGTAAAATCATTGCTGGTGGAACGTTTTCACTCGTGAAATGCTGCGGTGTTGGTCACTGCCTCGTGATGGCACTACAGTGCTTAATTCGCTTTGATACTTCAAATGCATAATGTTCTTCCTCGATAGAACAAAAAAGGTTGCAAAGGTTTTGGATAGATTTAATGACAAGTTGTGTTTCATCTCAGGGCAGGAGCTCGGGTATCATTTTTCTTAGTCAAGGTGGTGTTGTGGGTTCAACCGTAGACTGCCCCTTCCTCTTGGATTCTTTTTTACAATTTTCATATTCATATGTGAATAATAATAGGCTTAAATCTGACGTCGAGATTCCAATGGCAATGAACTTCATATACAAACTCTAGTTTAGGCCTCAAAATATCTTGTATAAATTTATATTTGCTTCTACGTTTTTCCCTTGATCTACGGTCTCATTTATTTCGAAGTTTAGAAACTAACAAAACTAATAGTTAGTATTGAGCTTACGGTTTAACTTTAGCCTTTTTTTTAGATCTTGAATATCTATTGCCTTCGAACATTGGTACTCTAACGATGCAAGTAAAAACAAGGTACAGATACCTTGTAATCAACTACATTTTCTTCAAATGTATATGATATTTGGTATGTCGTGTTTATTAGAAAACTTTGGTAGTGTTGTAGGTTCAAGTTAGTATTTCTTGGACGTTTGATTATTTCCTATGGGTGACGAATTTTCCAGTAAACTCTACTTGTTATCCCTTTTTCAGCAAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCTCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGGGTGGTTGTAATGGCTGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAATTGCAGAGGGTTATGAACTGGCCTCCCGGATAGCTGTTGATCACCTAGAGCATATTGCTCAGAAGTTTGATTTTGGTGACAGAAACTTTGAGCCTTTGGTTCAAACTTGCATGACCACTTTATCATCAAAGATGTATGGTGACATGAATTTTTATGCCCAATATACTGTATCATAATTGAATCATTGTTCATTGATTTTTTTTATTATGTTGGTTGAATTAAATTTGTTGACGTGTGTATATATTAAAGGTTGCATGATATTGTCACATTTGTTTGATAAAAGTTAATAAAAGCAACATTACCTGGTATGTTAGTGACACTCGCACATGAGCTATTATAGTGCCATTAATTTAGTTATTATATACAATTTTATTGATTGCTAAATCTATCGGTTTGGTTATGTCTACCTAGTATTTTCAAGGCATGCCAAGGCGATTGCCTATGGCAAGGGGCAATGGCGCATGCCCATTGCCTGAGTGCTATCCCACGCGAGAACCTTATTTGCACATTTTTGTCGCCATGAACATATGTTCTGGCGTTTAAGGTGCTTGCCTTTCACTTACAAAGGACAATGAACAGATGAAAATTGTTGGTTTCGTCCTAATTTGGTTGTTTTCTCATCTTGAATGTTACATCAGACTAGGAACATAAAAAATTTTAGCAACTGAATTGTTCGTGTAAAATGACAGTAAAGTGATTATATGATTTATTTTGGAAGTCGAAAAAGTGATGATGATTATTTATTATGATGTATTAGTACTTGGATACCTTTTATAGCCCTTTTTCTGAACTTGCAGTGTGAATCGTTGTAAGCGCAATCTAGCGGAAATTGCTGTTAAAGCAGTTGTTGCTGTGGCAGATCTTGATAGAAGGGATGTTAACTTAGACTTGATTAAAGTGGAAGGAAAAGTAGGGGGGAAGTTAGAAGATACTGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCGAAGCAGATTGAAGATGCTAAGATTGCCATCTTGACTTGCCCGTTTGAGCCACCTAAACCCAAGACAAAGCATAAGGTCGATATTGATACAGTGGAGAAGTTCCAAACGTTGAGACTGCAGGAACAAAAGTACTTTGATGACATGGTTCAAAAATGCAAGGTATAATGGAAAATATAGTAAGGTTATTTATTTTGTAGAGAGAGGAAGGTAGATAATATCTGTTTTTTAATAATGCCTACCATCTATTTCGTGGTCTTTTTGGCTCAAGAGAGAGGTTATTAGAGAATGGAGAGGTTTCATGGGAAGAGGTTTGGAATGCTACCCTTCAATGAATCCTTTAAACTCTATGCTTCTCTCTTGAGGGATACTAGTATGGTTCTTTTTATAATTTCCTTTTGTATGGTTTTGGCTCTGTTCCATTGGCTTGTTTCTGTGTGGTGTCTTTTCTGTATTTAAATCGTTATTAATGGAAGTTTTTTCCCTCTCTCATGAAGATTTATTTTTAGGCTGTTGATACATGTTTTATTGCAGGACGTTGGCGCTACATTGGTTATTTGTCAATGGGGGTTTGATGATGAAGCAAATCATCTGCTGATGCACCGAAATCTGCCAGCTGTGAGATGGGTTGGTGGTGTGGAGCTAGAGTTGATAGCGATAGCCACAGGTTTACCTCAATTATTTTATCAGCATTTAGATTAATCTTGTTGGTGGCCCATGGGGTTGGGCTCAGTTGTGGAAACTCTTAGATTCAACCTTGCAGCCAGGGGTTCAAACCCCTCTTTGTGTTGCCTTCGTGGGCTATTTAGTTTTGTCATGAGTTCTGTTACTACTGAAGATTACGAGTATTTTGACTACTGATTGTCACAAGTTAAGTGACACTTAATCATGACTAATTTTTTAATTCTCAAAACTAGTGACTGTTTAGGGCCTTATAAGAGGCAGCAAGAAGGGGGGGGGGGGCGGGGGTGTGGGTGAGCAAAGGGAGAACAAGGGGACCAGGCTGAATCAAAGACAATTATTTTGATTTGTAATTGAACTAAGAACTAATTGAAGTTAACAAGGGGATCCCGCTGAAGCAAAGACAGCTATTTTGATTTGTAATTCAACTAAGAACTAATTGAAGTTTAATCTTTGTTTTTAATCTTAATTGCTTAGCTCAAGAAACTGAATTAGACTAATTTTGGTTCTATTCTGATATCCAATTTATTGATTTTTATTTACCTTGGGTAATGTCATACTCTAGTTTACTTCATTGTCTAAATGGTAGTATTATTGACTTTGTAGGTGGAAGAATAGTCCCTAGGTTCCAAGAGTTGACATCAGAGAAACTTGGGAAGGTATTGCAGATCCCTGTTCATTATCTTTAGTTTAATTTTTATTTTCAGCCTTCCAAAAAATTTTTAATCTGGGATTTCGTTCCTGCCTGCAACTTTGCATGTATGCTTTTCTTGTTCAGTATAGAACAATATATGCTTCATGGTTGATACTTGATAGACTGGGATCTGGACGGAAAAGAACATTTAACTATGTCTTGTGAGTTAAAATACCAGCAAAGTTATCCTCTTGTGAACCTGTTGGGGGGGCTTGGTGAAGTAGTGAAGTACTGTTAACTTTAAGCTTATGTTTTTTTCTGAACTACTAACAATTTGATTCATGTGAGCTCATTCTTTCACTTCATGTGTATATCAAGCTCTATCTCACGGTCATATCTCCTGTTCTTTTCTCCTAATTTAAAGGCTGGCTTGGTTCGAGAAAAAGCATTTGGTACAACCAAAGATCGGATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTGACCATTTTTATTCGTGGAGGTAGGTAGATCCTTTCTTGTTCTTTTCATTTTTCAAGTTATTTATTTTAGCAGTTTTTTGCTCATTGATAGATTAGGCAATAGAATGTCAGGTGGTTGGAAAAATAATGTTAAAGTCGAGTTGATTTAGTAGTTAAACATTATCAGTGCAGTGGTGCAAAGTTAAAAACAGCATGGCCATAAGTGAACTGAGTTCATGACTGCATGGTTTTAGCAATGCGTAGAAGTATCCAGTTTCAAACATAATTTTCTGCACTGAACCTAGAGATACTAGATGGTTGATTGTAAACCTGCCTCAGAAGTGAAATTTTGAAATATGAATTAGTCAATTTTTTTTAGATGGAAATGAAAGAACACAAGATAAAAGGTTGATTCGAGATCTTGGATGATGATGACAAACTTATGATTTTTATCATGTTATGATTGTAGGTAACAAAATGATGATAGAGGAGACGAAACGTAGTATCCACGATGCTTTATGTGTGGCTAGGAATCTCATCCGCAATAATTCTATAGTATATGGCGGTGGCTCAGCTGAGATTTCTTGTTCAGTTGCTGTTGAGGCAGCTGCTGATAAATACCCTGGAGTTGAGCAGGTATGAATATTTTTAATTATCCGTAGCCTTCTTTCTGAATGAGCAAACGATGCTGAACCTTCCCCCCCTCTTCTGCAGTATGCTATCAGGGCATTTGCCGATGCTTTGGATTCTATTCCAATGGCTCTTGCGGAGAACAGTGGCTTGCAACCAATTGAAACACTTTCTGCCGTAAAGTCTCAGCAAATTAAGGTAGGTGGAACTAATAGCCATCTCAAATTGCTAACCTCGATGTACAGATTTAATGCGTGATTTTACATGAAGGATTCAATATTATTGATTTGGATTAAATATGCAGGAGAATAATCCCTATTGTGGAATAGATTGTAATGATGTCGGCACAAATGACATGAGGGAGCAAAATGTGTTCGAAACTTTGATTGGTAAGCAGCAGCAGATTTTATTGGCAACTCAGGTTGTGAAGCTGATTCTGAAGATTGATGATGTCATATCTCCTTCTGACTAT

mRNA sequence

ATGGCGCTCGCTTTCGATGAGTTTGGGAGGCCTTTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCCGGCAGAGCTGTCGCTCGTATCCTCAGGACCTCGCTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCCGATGGTGACGTTACAATAACAAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCTCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGGGTGGTTGTAATGGCTGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAATTGCAGAGGGTTATGAACTGGCCTCCCGGATAGCTGTTGATCACCTAGAGCATATTGCTCAGAAGTTTGATTTTGGTGACAGAAACTTTGAGCCTTTGGTTCAAACTTGCATGACCACTTTATCATCAAAGATTGTGAATCGTTGTAAGCGCAATCTAGCGGAAATTGCTGTTAAAGCAGTTGTTGCTGTGGCAGATCTTGATAGAAGGGATGTTAACTTAGACTTGATTAAAGTGGAAGGAAAAGTAGGGGGGAAGTTAGAAGATACTGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCGAAGCAGATTGAAGATGCTAAGATTGCCATCTTGACTTGCCCGTTTGAGCCACCTAAACCCAAGACAAAGCATAAGGTCGATATTGATACAGTGGAGAAGTTCCAAACGTTGAGACTGCAGGAACAAAAGTACTTTGATGACATGGTTCAAAAATGCAAGGACGTTGGCGCTACATTGGTTATTTGTCAATGGGGGTTTGATGATGAAGCAAATCATCTGCTGATGCACCGAAATCTGCCAGCTGTGAGATGGGTTGGTGGTGTGGAGCTAGAGTTGATAGCGATAGCCACAGGTGGAAGAATAGTCCCTAGGTTCCAAGAGTTGACATCAGAGAAACTTGGGAAGGCTGGCTTGGTTCGAGAAAAAGCATTTGGTACAACCAAAGATCGGATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTGACCATTTTTATTCGTGGAGGTAACAAAATGATGATAGAGGAGACGAAACGTAGTATCCACGATGCTTTATGTGTGGCTAGGAATCTCATCCGCAATAATTCTATAGTATATGGCGGTGGCTCAGCTGAGATTTCTTGTTCAGTTGCTGTTGAGGCAGCTGCTGATAAATACCCTGGAGTTGAGCAGTATGCTATCAGGGCATTTGCCGATGCTTTGGATTCTATTCCAATGGCTCTTGCGGAGAACAGTGGCTTGCAACCAATTGAAACACTTTCTGCCGTAAAGTCTCAGCAAATTAAGGAGAATAATCCCTATTGTGGAATAGATTGTAATGATGTCGGCACAAATGACATGAGGGAGCAAAATGTGTTCGAAACTTTGATTGGTAAGCAGCAGCAGATTTTATTGGCAACTCAGGTTGTGAAGCTGATTCTGAAGATTGATGATGTCATATCTCCTTCTGACTAT

Coding sequence (CDS)

ATGGCGCTCGCTTTCGATGAGTTTGGGAGGCCTTTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCCGGCAGAGCTGTCGCTCGTATCCTCAGGACCTCGCTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCCGATGGTGACGTTACAATAACAAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCTCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGGGTGGTTGTAATGGCTGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAATTGCAGAGGGTTATGAACTGGCCTCCCGGATAGCTGTTGATCACCTAGAGCATATTGCTCAGAAGTTTGATTTTGGTGACAGAAACTTTGAGCCTTTGGTTCAAACTTGCATGACCACTTTATCATCAAAGATTGTGAATCGTTGTAAGCGCAATCTAGCGGAAATTGCTGTTAAAGCAGTTGTTGCTGTGGCAGATCTTGATAGAAGGGATGTTAACTTAGACTTGATTAAAGTGGAAGGAAAAGTAGGGGGGAAGTTAGAAGATACTGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCGAAGCAGATTGAAGATGCTAAGATTGCCATCTTGACTTGCCCGTTTGAGCCACCTAAACCCAAGACAAAGCATAAGGTCGATATTGATACAGTGGAGAAGTTCCAAACGTTGAGACTGCAGGAACAAAAGTACTTTGATGACATGGTTCAAAAATGCAAGGACGTTGGCGCTACATTGGTTATTTGTCAATGGGGGTTTGATGATGAAGCAAATCATCTGCTGATGCACCGAAATCTGCCAGCTGTGAGATGGGTTGGTGGTGTGGAGCTAGAGTTGATAGCGATAGCCACAGGTGGAAGAATAGTCCCTAGGTTCCAAGAGTTGACATCAGAGAAACTTGGGAAGGCTGGCTTGGTTCGAGAAAAAGCATTTGGTACAACCAAAGATCGGATGCTATACATTGAACATTGTGCAAACTCAAGGGCTGTGACCATTTTTATTCGTGGAGGTAACAAAATGATGATAGAGGAGACGAAACGTAGTATCCACGATGCTTTATGTGTGGCTAGGAATCTCATCCGCAATAATTCTATAGTATATGGCGGTGGCTCAGCTGAGATTTCTTGTTCAGTTGCTGTTGAGGCAGCTGCTGATAAATACCCTGGAGTTGAGCAGTATGCTATCAGGGCATTTGCCGATGCTTTGGATTCTATTCCAATGGCTCTTGCGGAGAACAGTGGCTTGCAACCAATTGAAACACTTTCTGCCGTAAAGTCTCAGCAAATTAAGGAGAATAATCCCTATTGTGGAATAGATTGTAATGATGTCGGCACAAATGACATGAGGGAGCAAAATGTGTTCGAAACTTTGATTGGTAAGCAGCAGCAGATTTTATTGGCAACTCAGGTTGTGAAGCTGATTCTGAAGATTGATGATGTCATATCTCCTTCTGACTAT

Protein sequence

MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY

Homology

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BLAST of MS000936 vs. NCBI nr
Match: XP_022131750.1 (T-complex protein 1 subunit epsilon [Momordica charantia])

HSP 1 Score: 1048.9 bits (2711), Expect = 1.5e-302
Identity = 534/535 (99.81%), Postives = 535/535 (100.00%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKA+IASGRAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKASIASGRAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 535

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BLAST of MS000936 vs. NCBI nr
Match: XP_004142957.2 (T-complex protein 1 subunit epsilon [Cucumis sativus] >KGN62337.1 hypothetical protein Csa_018732 [Cucumis sativus])

HSP 1 Score: 1033.9 bits (2672), Expect = 5.0e-298
Identity = 520/535 (97.20%), Postives = 533/535 (99.63%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYELASRIAVDHLEHIAQKFDFG++N EPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGEKNLEPLIQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVE AADKYPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISPSDY
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY 535

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BLAST of MS000936 vs. NCBI nr
Match: XP_022962435.1 (T-complex protein 1 subunit epsilon [Cucurbita moschata] >XP_023545497.1 T-complex protein 1 subunit epsilon [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1030.8 bits (2664), Expect = 4.2e-297
Identity = 520/535 (97.20%), Postives = 533/535 (99.63%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELAS+IAVDHLEHIAQKFDFG+ + EPLVQTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRIAEGYELASKIAVDHLEHIAQKFDFGETDLEPLVQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLL+HRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLLHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRM+YIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISPS+Y
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 535

[Close]

BLAST of MS000936 vs. NCBI nr
Match: XP_038885409.1 (T-complex protein 1 subunit epsilon [Benincasa hispida])

HSP 1 Score: 1029.6 bits (2661), Expect = 9.4e-297
Identity = 520/535 (97.20%), Postives = 531/535 (99.25%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLE+AERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEEAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELASRIAVDHLEHIAQKF+FG+ N EPLVQTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFEFGEANLEPLVQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGG S
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGAS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVE AADKYPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISP+DY
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPADY 535

[Close]

BLAST of MS000936 vs. NCBI nr
Match: XP_022951552.1 (T-complex protein 1 subunit epsilon-like [Cucurbita moschata])

HSP 1 Score: 1028.9 bits (2659), Expect = 1.6e-296
Identity = 519/535 (97.01%), Postives = 531/535 (99.25%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYELASRIAVDHLEHIAQKFDFG+ N EPL+QTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCNDVGTNDMR+QNVFETLIGKQQQ+LLATQVVK+ILKIDDVIS SDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of MS000936 vs. ExPASy Swiss-Prot
Match: O04450 (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 975.7 bits (2521), Expect = 2.1e-283
Identity = 486/535 (90.84%), Postives = 522/535 (97.57%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIIL+EQ+QKTRLRG+DAQKANIA+G+AVARILR+SLGPKGMDKMLQ P
Sbjct: 1   MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L
Sbjct: 61  DGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           +RGIHPIRIAEGYE+ASR+AV+HLE IAQKF+F   N+EPLVQTCMTTLSSKIVNRCKR+
Sbjct: 121 DRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAV+AVADL+RRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DA IAILTCPFEPPKPKTKHKVDIDTVEKF+TLR QEQ+YFD+MVQKCKDVGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTK+RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+
Sbjct: 361 GTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGA 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEI+CS+AV+AAADKYPGVEQYAIRAFA+ALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           N P+ GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVIS S+Y
Sbjct: 481 NIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535

[Close]

BLAST of MS000936 vs. ExPASy Swiss-Prot
Match: P54411 (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 1.2e-273
Identity = 474/535 (88.60%), Postives = 513/535 (95.89%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MAL FDE+ RPFIIL+EQE+K+RL+GLDAQKANIA+G++VARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVVMAG+LLEQAE+LL
Sbjct: 61  DGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYE+ASRIAVDHLE I+ K++F   + EPLVQTCMTTLSSKIV+RCKR 
Sbjct: 121 ERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRA 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAV+AVADL+R+DVNLDLIKVEGKVGGKLEDTELV GIIVDKDMSHPQMPK+IE
Sbjct: 181 LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVQGIIVDKDMSHPQMPKRIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQEL++EKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCS+AVEAAAD++PGVEQYAIRAFADALD+IP+ALAENSGL PI+TL+ VKSQ +KE
Sbjct: 421 AEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NN  CGIDCNDVGTNDM+EQNVFETLIGKQQQILLATQVVK+ILKIDDVI+PS+Y
Sbjct: 481 NNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of MS000936 vs. ExPASy Swiss-Prot
Match: P40412 (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 941.0 bits (2431), Expect = 5.8e-273
Identity = 472/535 (88.22%), Postives = 512/535 (95.70%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDE+GRPFIIL+EQE+K+RL+GLDA KANIA+ +A+ARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVVMAGALLEQAE+LL
Sbjct: 61  DGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYE+ASRIAVDHLE I+ K++F   + EPLVQTCMTTLSSKIV+RCKR 
Sbjct: 121 ERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRA 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEI+VKAV+AVADL+R+DVNLDLIKVEGKVGGKLEDTELV GIIVDKDMSHPQMPK+I 
Sbjct: 181 LAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVEGIIVDKDMSHPQMPKRIY 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DA IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQEL++EKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCS+AVEAAAD++PGVEQYAIRAFADALD+IP+ALAENSGL PI+TL+ VKSQ +KE
Sbjct: 421 AEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NN  CGIDCNDVGTNDM+EQNVFETLIGKQQQILLATQVVK+ILKIDDVI+PS+Y
Sbjct: 481 NNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of MS000936 vs. ExPASy Swiss-Prot
Match: P48643 (T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 754.6 bits (1947), Expect = 7.6e-217
Identity = 365/532 (68.61%), Postives = 457/532 (85.90%), Query Frame = 0


Query: 3   LAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSPDG 62
           LAFDE+GRPF+I+K+Q++K+RL GL+A K++I + +AVA  +RTSLGP G+DKM+   DG
Sbjct: 7   LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDG 66

Query: 63  DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLER 122
           DVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AGALLE+AE+LL+R
Sbjct: 67  DVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDR 126

Query: 123 GIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLA 182
           GIHPIRIA+GYE A+R+A++HL+ I+       ++ EPL+QT  TTL SK+VN C R +A
Sbjct: 127 GIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMA 186

Query: 183 EIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDA 242
           EIAV AV+ VAD++RRDV+ +LIKVEGKVGG+LEDT+L+ G+IVDKD SHPQMPK++EDA
Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDA 246

Query: 243 KIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGF 302
           KIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+Q+ K+ GA L ICQWGF
Sbjct: 247 KIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGF 306

Query: 303 DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGT 362
           DDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF ELT+EKLG AGLV+E +FGT
Sbjct: 307 DDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGT 366

Query: 363 TKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAE 422
           TKD+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGG+AE
Sbjct: 367 TKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426

Query: 423 ISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENN 482
           ISC++AV   ADK P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+++Q+KE N
Sbjct: 427 ISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMN 486

Query: 483 PYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSD 535
           P  GIDC   GTNDM++Q+V ETLIGK+QQI LATQ+V++ILKIDD+  P +
Sbjct: 487 PALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of MS000936 vs. ExPASy Swiss-Prot
Match: Q4R6V2 (T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 SV=1)

HSP 1 Score: 754.6 bits (1947), Expect = 7.6e-217
Identity = 365/532 (68.61%), Postives = 457/532 (85.90%), Query Frame = 0


Query: 3   LAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSPDG 62
           LAFDE+GRPF+I+K+Q++K+RL GL+A K++I + +AVA  +RTSLGP G+DKM+   DG
Sbjct: 7   LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDG 66

Query: 63  DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLER 122
           DVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AGALLE+AE+LL+R
Sbjct: 67  DVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDR 126

Query: 123 GIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLA 182
           GIHPIRIA+GYE A+R+A++HL+ I+       ++ EPL+QT  TTL SK+VN C R +A
Sbjct: 127 GIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMA 186

Query: 183 EIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDA 242
           EIAV AV+ VAD++RRDV+ +LIKVEGKVGG+LEDT+L+ G+IVDKD SHPQMPK++EDA
Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDA 246

Query: 243 KIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGF 302
           KIAILTCPFEPPKPKTKHK+D+ +VE ++ L+  E++ F++M+Q+ K+ GA L ICQWGF
Sbjct: 247 KIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGF 306

Query: 303 DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGT 362
           DDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF ELT+EKLG AGLV+E +FGT
Sbjct: 307 DDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGT 366

Query: 363 TKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAE 422
           TKD+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGG+AE
Sbjct: 367 TKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426

Query: 423 ISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENN 482
           ISC++AV   ADK P +EQYA+RAFADAL+ IPMAL+ENSG+ PI+T++ V+++Q+KE N
Sbjct: 427 ISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMN 486

Query: 483 PYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSD 535
           P  GIDC   GTNDM++Q+V ETLIGK+QQI LATQ+V++ILKIDD+  P +
Sbjct: 487 PALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGE 538

[Close]

BLAST of MS000936 vs. ExPASy TrEMBL
Match: A0A6J1BQJ9 (CCT-epsilon OS=Momordica charantia OX=3673 GN=LOC111004839 PE=3 SV=1)

HSP 1 Score: 1048.9 bits (2711), Expect = 7.2e-303
Identity = 534/535 (99.81%), Postives = 535/535 (100.00%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKA+IASGRAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKASIASGRAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 535

[Close]

BLAST of MS000936 vs. ExPASy TrEMBL
Match: A0A0A0LNE6 (CCT-epsilon OS=Cucumis sativus OX=3659 GN=Csa_2G350200 PE=3 SV=1)

HSP 1 Score: 1033.9 bits (2672), Expect = 2.4e-298
Identity = 520/535 (97.20%), Postives = 533/535 (99.63%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYELASRIAVDHLEHIAQKFDFG++N EPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGEKNLEPLIQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVE AADKYPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISPSDY
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY 535

[Close]

BLAST of MS000936 vs. ExPASy TrEMBL
Match: A0A6J1HF21 (CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111462873 PE=3 SV=1)

HSP 1 Score: 1030.8 bits (2664), Expect = 2.0e-297
Identity = 520/535 (97.20%), Postives = 533/535 (99.63%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELAS+IAVDHLEHIAQKFDFG+ + EPLVQTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRIAEGYELASKIAVDHLEHIAQKFDFGETDLEPLVQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLL+HRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLLHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRM+YIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISPS+Y
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 535

[Close]

BLAST of MS000936 vs. ExPASy TrEMBL
Match: A0A5A7V3F9 (CCT-epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001820 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 7.7e-297
Identity = 520/535 (97.20%), Postives = 529/535 (98.88%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFG+ N EPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLGRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVE AADKYPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCND+GTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVISP DY
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPLDY 535

[Close]

BLAST of MS000936 vs. ExPASy TrEMBL
Match: A0A6J1GI10 (CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111454330 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 7.7e-297
Identity = 519/535 (97.01%), Postives = 531/535 (99.25%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKANIASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           ERGIHPIR+AEGYELASRIAVDHLEHIAQKFDFG+ N EPL+QTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEISCSVAVEAAADKYPGVEQYAIRAFADALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           NNPYCGIDCNDVGTNDMR+QNVFETLIGKQQQ+LLATQVVK+ILKIDDVIS SDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of MS000936 vs. TAIR 10
Match: AT1G24510.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 975.7 bits (2521), Expect = 1.5e-284
Identity = 486/535 (90.84%), Postives = 522/535 (97.57%), Query Frame = 0


Query: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSP 60
           MALAFDEFGRPFIIL+EQ+QKTRLRG+DAQKANIA+G+AVARILR+SLGPKGMDKMLQ P
Sbjct: 1   MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGP 60

Query: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
           DGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L
Sbjct: 61  DGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQL 120

Query: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180
           +RGIHPIRIAEGYE+ASR+AV+HLE IAQKF+F   N+EPLVQTCMTTLSSKIVNRCKR+
Sbjct: 121 DRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRS 180

Query: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
           LAEIAVKAV+AVADL+RRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 240

Query: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
           DA IAILTCPFEPPKPKTKHKVDIDTVEKF+TLR QEQ+YFD+MVQKCKDVGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQW 300

Query: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSF 360

Query: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
           GTTK+RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+
Sbjct: 361 GTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGA 420

Query: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
           AEI+CS+AV+AAADKYPGVEQYAIRAFA+ALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           N P+ GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVK+ILKIDDVIS S+Y
Sbjct: 481 NIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535

[Close]

BLAST of MS000936 vs. TAIR 10
Match: AT1G24510.2 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 839.3 bits (2167), Expect = 1.7e-243
Identity = 418/459 (91.07%), Postives = 447/459 (97.39%), Query Frame = 0


Query: 77  MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRIAEGYELA 136
           MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L+RGIHPIRIAEGYE+A
Sbjct: 1   MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 60

Query: 137 SRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLD 196
           SR+AV+HLE IAQKF+F   N+EPLVQTCMTTLSSKIVNRCKR+LAEIAVKAV+AVADL+
Sbjct: 61  SRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLE 120

Query: 197 RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKP 256
           RRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIEDA IAILTCPFEPPKP
Sbjct: 121 RRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKP 180

Query: 257 KTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLP 316
           KTKHKVDIDTVEKF+TLR QEQ+YFD+MVQKCKDVGATLVICQWGFDDEANHLLMHRNLP
Sbjct: 181 KTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLP 240

Query: 317 AVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANS 376
           AVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+FGTTK+RMLYIEHCANS
Sbjct: 241 AVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANS 300

Query: 377 RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKY 436
           +AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+AEI+CS+AV+AAADKY
Sbjct: 301 KAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKY 360

Query: 437 PGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTND 496
           PGVEQYAIRAFA+ALDS+PMALAENSGLQPIETLSAVKSQQIKEN P+ GIDCNDVGTND
Sbjct: 361 PGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTND 420

Query: 497 MREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 536
           MREQNVFETLIGKQQQILLATQVVK+ILKIDDVIS S+Y
Sbjct: 421 MREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 459

[Close]

BLAST of MS000936 vs. TAIR 10
Match: AT3G18190.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 311.6 bits (797), Expect = 1.2e-84
Identity = 189/512 (36.91%), Postives = 302/512 (58.98%), Query Frame = 0


Query: 28  DAQKANIASGRAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLM 87
           D + ANI S RAV+  +RTSLGPKGMDKM+ + +G+V ITNDGATIL +M+V    AK++
Sbjct: 28  DIRFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKML 87

Query: 88  VELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRIAEGYELASRIAVDHLEHI 147
           VELS+SQD   GDGTT VVV+AGALL++ + LL  GIHP  I++    A   A+D L  +
Sbjct: 88  VELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAM 147

Query: 148 AQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLDRRD-VNLDLIK 207
           A   +  DR  + LV++  T+L+SK+V++    LA +AV AV++V D ++ + V+L  IK
Sbjct: 148 AVPVELTDR--DSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDPEKPEIVDLRDIK 207

Query: 208 VEGKVGGKLEDTELVYGIIVDKDMSHPQ-MPKQIEDAKIAILTCPFEPPKPKTKHKVDID 267
           +  K+GG ++DT  V G++ DK +S     P ++E+AKIA++     PPK   +  + + 
Sbjct: 208 IVKKLGGTVDDTHTVKGLVFDKKVSRAAGGPTRVENAKIAVIQFQISPPKTDIEQSIVVS 267

Query: 268 TVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRW 327
              +   +  +E+ Y   M++K K  G  +++ Q         D + H L    +  ++ 
Sbjct: 268 DYTQMDRILKEERNYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKIMVIKD 327

Query: 328 VGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCAN-SRAV 387
           V   E+E +        +   +   +EKLG A LV E + G  K  +L I    +  R  
Sbjct: 328 VERDEIEFVTKTLNCLPIANIEHFRAEKLGHADLVEEASLGDGK--ILKITGIKDMGRTT 387

Query: 388 TIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPGV 447
           ++ +RG N+++++E +RS+HDALCV R L+    ++ GGG+ EI  S  + A A    G+
Sbjct: 388 SVLVRGSNQLVLDEAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKVLHGM 447

Query: 448 EQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMRE 507
           E Y +++FA+AL+ IP  LAEN+GL PI  ++ ++++   +     GI+       ++ E
Sbjct: 448 EGYCVKSFAEALEVIPYTLAENAGLNPIAIVTELRNKH-AQGEINAGINVRKGQITNILE 507

Query: 508 QNVFETLIGKQQQILLATQVVKLILKIDDVIS 532
           +NV + L+     I LAT+ V++ILKIDD+++
Sbjct: 508 ENVVQPLLVSTSAITLATECVRMILKIDDIVT 534

[Close]

BLAST of MS000936 vs. TAIR 10
Match: AT5G26360.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 283.1 bits (723), Expect = 4.6e-76
Identity = 180/528 (34.09%), Postives = 292/528 (55.30%), Query Frame = 0


Query: 11  PFIILKEQEQKTRLRGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSPDGDVTITNDG 70
           P ++L +  +  R  G      NI + +AVA I+RT+LGP+ M KML    G + +TNDG
Sbjct: 4   PVLVLSDSLK--RESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDG 63

Query: 71  ATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRIA 130
             IL ++DV +  AK M+ELSR+QD E+GDGTT V+V+AG +L  AE  LE+  HP  I 
Sbjct: 64  NAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVIC 123

Query: 131 EGYELASRIAVDHLEHIAQKFDFGDRN-FEPLVQTCMTTLSSKIVNRCKRNLAEIAVKAV 190
             Y  A   ++  L+ IA   D  DR+    LV++C+ T   K  ++    +A++A+ A 
Sbjct: 124 RAYIKALEDSIAVLDKIAMSIDINDRSQVLGLVKSCIGT---KFTSQFGDLIADLAIDAT 183

Query: 191 VAV-ADLDR--RDVNL-DLIKVEGKVGGKLEDTELVYGIIVDKDMSHP-QMPKQIEDAKI 250
             V  DL +  R+V++   IKVE   GG+ ED+E++ G++ +KD+  P +M ++I + +I
Sbjct: 184 TTVGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVMFNKDVVAPGKMKRKIVNPRI 243

Query: 251 AILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDD 310
            +L CP E  K + +   ++   E ++ L   E++Y +++  +       LVI + G  D
Sbjct: 244 ILLDCPLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQILKFKPDLVITEKGLSD 303

Query: 311 EANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGK-AGLVREKAFGTT 370
            A H      + A+R +   +   IA A G  IV R  EL    +G  AGL   K  G  
Sbjct: 304 LACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTGAGLFEVKKIG-- 363

Query: 371 KDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEI 430
            D   +I  C   +A T+ +RG +K  I E +R++ DA+ VARN+I+N  +V GGG+ E+
Sbjct: 364 DDFFSFIVDCKEPKACTVLLRGPSKDFINEVERNLQDAMSVARNIIKNPKLVPGGGATEL 423

Query: 431 SCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENNP 490
           + S  ++  +    G+E++   A A A ++IP  LA+N G+  I T++A++ +     N 
Sbjct: 424 TVSATLKQKSATIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENA 483

Query: 491 YCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVIS 532
           + GID N     DM+E  ++++   K Q    A +   ++L+IDD++S
Sbjct: 484 WTGIDGNTGAIADMKESKIWDSYNVKAQTFKTAIEAACMLLRIDDIVS 524

[Close]

BLAST of MS000936 vs. TAIR 10
Match: AT5G20890.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-74
Identity = 173/511 (33.86%), Postives = 288/511 (56.36%), Query Frame = 0


Query: 25  RGLDAQKANIASGRAVARILRTSLGPKGMDKMLQSPDGD--VTITNDGATILEQMDVDNQ 84
           +G  A+ A+     A++ +++++LGPKGMDK+LQS      VT+TNDGATIL+ + +DN 
Sbjct: 15  KGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNP 74

Query: 85  IAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRIAEGYELASRIAVD 144
            AK++V++S+ QD E+GDGTT VVV+AG LL +AE+L+   IHP+ I  GY +AS  A +
Sbjct: 75  AAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARN 134

Query: 145 H-LEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLDRRDVN 204
             L+ +    D  ++    L++  MTTL SKI+++ K + AE+AV AV  +    +   N
Sbjct: 135 ALLKRVIDNKDNAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRL----KGSTN 194

Query: 205 LDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKT-KH 264
           L+ I++  K GG L+D+ L  G I+DK +   Q PK+IE+A I +     +  K K    
Sbjct: 195 LEAIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENANILVANTAMDTDKVKIYGA 254

Query: 265 KVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRW 324
           +V +D++ K   +   E++   D V+K    G    + +    +    L     + A+  
Sbjct: 255 RVRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEH 314

Query: 325 VGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANSRAVT 384
                +E + + TGG I   F    S KLG   L+ E   G  +D++++   C   +A +
Sbjct: 315 ADFEGIERLGLVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGCEMGQACS 374

Query: 385 IFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPGVE 444
           I +RG +  +++E +RS+HDALCV    + +  ++ GGG  E+  +  V+  A K  G +
Sbjct: 375 IVLRGASHHVLDEAERSLHDALCVLSQTVNDTRVLLGGGWPEMVMAKEVDELARKTAGKK 434

Query: 445 QYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMREQ 504
            +AI AF+ AL +IP  +A+N+GL   E ++ ++++   E     GID       DM E+
Sbjct: 435 SHAIEAFSRALVAIPTTIADNAGLDSAELVAQLRAEHHTE-GCNAGIDVITGAVGDMEER 494

Query: 505 NVFETLIGKQQQILLATQVVKLILKIDDVIS 532
            ++E    KQ  +L AT+  ++IL++D++I+
Sbjct: 495 GIYEAFKVKQAVLLSATEASEMILRVDEIIT 517

The following BLAST results are available for this feature:

BLAST of MS000936 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131750.1	1.5e-302	99.81	T-complex protein 1 subunit epsilon [Momordica charantia]	[more]
XP_004142957.2	5.0e-298	97.20	T-complex protein 1 subunit epsilon [Cucumis sativus] >KGN62337.1 hypothetical p...	[more]
XP_022962435.1	4.2e-297	97.20	T-complex protein 1 subunit epsilon [Cucurbita moschata] >XP_023545497.1 T-compl...	[more]
XP_038885409.1	9.4e-297	97.20	T-complex protein 1 subunit epsilon [Benincasa hispida]	[more]
XP_022951552.1	1.6e-296	97.01	T-complex protein 1 subunit epsilon-like [Cucurbita moschata]	[more]

BLAST of MS000936 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04450	2.1e-283	90.84	T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1...	[more]
P54411	1.2e-273	88.60	T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1	[more]
P40412	5.8e-273	88.22	T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1	[more]
P48643	7.6e-217	68.61	T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1	[more]
Q4R6V2	7.6e-217	68.61	T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 ...	[more]

BLAST of MS000936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BQJ9	7.2e-303	99.81	CCT-epsilon OS=Momordica charantia OX=3673 GN=LOC111004839 PE=3 SV=1	[more]
A0A0A0LNE6	2.4e-298	97.20	CCT-epsilon OS=Cucumis sativus OX=3659 GN=Csa_2G350200 PE=3 SV=1	[more]
A0A6J1HF21	2.0e-297	97.20	CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111462873 PE=3 SV=1	[more]
A0A5A7V3F9	7.7e-297	97.20	CCT-epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001820 P...	[more]
A0A6J1GI10	7.7e-297	97.01	CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111454330 PE=3 SV=1	[more]

BLAST of MS000936 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24510.1	1.5e-284	90.84	TCP-1/cpn60 chaperonin family protein	[more]
AT1G24510.2	1.7e-243	91.07	TCP-1/cpn60 chaperonin family protein	[more]
AT3G18190.1	1.2e-84	36.91	TCP-1/cpn60 chaperonin family protein	[more]
AT5G26360.1	4.6e-76	34.09	TCP-1/cpn60 chaperonin family protein	[more]
AT5G20890.1	1.1e-74	33.86	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 64..82 score: 37.32 coord: 414..426 score: 46.33 coord: 42..58 score: 42.23 coord: 94..113 score: 47.94 coord: 380..402 score: 34.6
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 5..532
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 40..531 e-value: 3.4E-157 score: 524.0
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 222..376 e-value: 6.9E-176 score: 587.9
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 217..385
IPR012718	T-complex protein 1, epsilon subunit	TIGRFAM	TIGR02343	TIGR02343	coord: 3..532 e-value: 6.4E-298 score: 986.7
IPR012718	T-complex protein 1, epsilon subunit	CDD	cd03339	TCP1_epsilon	coord: 6..531 e-value: 0.0 score: 1049.2
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 150..412 e-value: 6.9E-176 score: 587.9
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 157..412
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 38..530 e-value: 6.9E-176 score: 587.9
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 21..531
None	No IPR available	PANTHER	PTHR11353:SF198	BNAA08G19100D PROTEIN	coord: 5..532
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 45..57
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 94..102
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 66..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000936.1	MS000936.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051082	unfolded protein binding