MS000920 (gene) Bitter gourd (TR) v1

Overview


Name	MS000920
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Location	scaffold36: 272644 .. 273265 (+)
RNA-Seq Expression	MS000920
Synteny	MS000920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGCTATCCCGACGGCAAACTCCGCTACCACGGTGGCGAAACCCGCCTTCTTGCCGTTAGCCGCTCCATTTCCTTTACTGGTAACCGCTTCATTTCTCTGTATTCGTGTTCTGTGTTCTGTACTCTGTATTCTGTATTCTAATTGCAATAACTGTAATACATGGTACGGTACAGAGCTGTTGTTCAAGTTCGGGCAGCTGTGCGGAACATCCGTTTGTGTGAGCTTCCGTTGCCAATTGCCAAGAGAAGACCTGGATGCCCTAGTTTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAAGAGTACGATCGAGCCGCTTCTCCACCCTCGTCATTCAATTTCAAGATCAGAGCATTCCTTTCACCTCCAAAATTATATACCAAAAACATCTCCCCTCCTCCTTCCTCCCTCTCCTCCTCCTCCTCCTCCATGTCGCCGCCTCACCGCTGCTCTCGTCACATCTCACTGCCCAATCATAATTCCTACTTCGAAAGATCTGTGTCCGTCCCTCTCATTCTCTGTAACCTTCACGGAAACTCCAGGCGCATCTTCATCCACAACGCTAACAGCTGGGGA

mRNA sequence

ACCCTCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGCTATCCCGACGGCAAACTCCGCTACCACGGTGGCGAAACCCGCCTTCTTGCCGTTAGCCGCTCCATTTCCTTTACTGAGCTGTTGTTCAAGTTCGGGCAGCTGTGCGGAACATCCGTTTGTGTGAGCTTCCGTTGCCAATTGCCAAGAGAAGACCTGGATGCCCTAGTTTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAAGAGTACGATCGAGCCGCTTCTCCACCCTCGTCATTCAATTTCAAGATCAGAGCATTCCTTTCACCTCCAAAATTATATACCAAAAACATCTCCCCTCCTCCTTCCTCCCTCTCCTCCTCCTCCTCCTCCATGTCGCCGCCTCACCGCTGCTCTCGTCACATCTCACTGCCCAATCATAATTCCTACTTCGAAAGATCTGTGTCCGTCCCTCTCATTCTCTGTAACCTTCACGGAAACTCCAGGCGCATCTTCATCCACAACGCTAACAGCTGGGGA

Coding sequence (CDS)

ACCCTCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGCTATCCCGACGGCAAACTCCGCTACCACGGTGGCGAAACCCGCCTTCTTGCCGTTAGCCGCTCCATTTCCTTTACTGAGCTGTTGTTCAAGTTCGGGCAGCTGTGCGGAACATCCGTTTGTGTGAGCTTCCGTTGCCAATTGCCAAGAGAAGACCTGGATGCCCTAGTTTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAAGAGTACGATCGAGCCGCTTCTCCACCCTCGTCATTCAATTTCAAGATCAGAGCATTCCTTTCACCTCCAAAATTATATACCAAAAACATCTCCCCTCCTCCTTCCTCCCTCTCCTCCTCCTCCTCCTCCATGTCGCCGCCTCACCGCTGCTCTCGTCACATCTCACTGCCCAATCATAATTCCTACTTCGAAAGATCTGTGTCCGTCCCTCTCATTCTCTGTAACCTTCACGGAAACTCCAGGCGCATCTTCATCCACAACGCTAACAGCTGGGGA

Protein sequence

TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG

Homology

[Close]

BLAST of MS000920 vs. NCBI nr
Match: XP_022132205.1 (uncharacterized protein LOC111005121 [Momordica charantia])

HSP 1 Score: 359.4 bits (921), Expect = 1.8e-95
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC
Sbjct: 12  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 71

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS
Sbjct: 72  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 131

Query: 121 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG 177
           LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
Sbjct: 132 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG 187

[Close]

BLAST of MS000920 vs. NCBI nr
Match: XP_023545452.1 (uncharacterized protein LOC111804876 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 130/180 (72.22%), Postives = 145/180 (80.56%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRC
Sbjct: 76  TIKFLCSYGGKILPRYPDGELRYHGGETRLLAFNRSISFSDLLLKFGELCGTSISVSFRC 135

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPS- 120
           QLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KIRAFL PPK Y K ISPP S 
Sbjct: 136 QLPKEDLDALVSITSDEDLANLIEEYDRAASSSSSSSLKIRAFLFPPK-YAKRISPPSSM 195

Query: 121 ---SLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW 176
              S SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Sbjct: 196 ASFSSSSSLSSMSAAHRCFRRMS-PPHASYLERSASAVPCSVYNIQGSSSRMFVHNGRSW 253

[Close]

BLAST of MS000920 vs. NCBI nr
Match: XP_022961752.1 (uncharacterized protein LOC111462427 [Cucurbita moschata])

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-58
Identity = 129/181 (71.27%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRC
Sbjct: 76  TIKFLCSYGGKILPRYPDGELRYHGGETRLLAFNRSISFSDLLLKFGELCGTSISVSFRC 135

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPP-- 120
           QLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KIRAFL PPK Y K ISPP   
Sbjct: 136 QLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSLKIRAFLFPPK-YAKRISPPSSM 195

Query: 121 ---SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANS 176
              SS SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN   
Sbjct: 196 PSFSSSSSSLSSMSAAHRCFRRMS-PPHASYLERSASAVPCSVYNIQGSSSRMFVHNGRC 252

[Close]

BLAST of MS000920 vs. NCBI nr
Match: XP_022996772.1 (uncharacterized protein LOC111491906 [Cucurbita maxima])

HSP 1 Score: 234.2 bits (596), Expect = 8.7e-58
Identity = 128/180 (71.11%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDG+LRY GGETRLLA +RSISF++LL KFG+LCGTS+ VSFRC
Sbjct: 18  TIKFLCSYGGKILPRYPDGELRYRGGETRLLAFNRSISFSDLLLKFGELCGTSISVSFRC 77

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KIRAFL PPK Y K ISPP S 
Sbjct: 78  QLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSLKIRAFLFPPK-YAKRISPPSSM 137

Query: 121 L----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW 176
                SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Sbjct: 138 ASFFSSSSLSSMSAAHRCFRRMS-PPHASYSERSASAVPCSVYNIQGSSSRMFVHNGRSW 193

[Close]

BLAST of MS000920 vs. NCBI nr
Match: XP_004142964.1 (uncharacterized protein LOC101207008 [Cucumis sativus] >XP_031736384.1 uncharacterized protein LOC101207008 [Cucumis sativus] >KGN62323.1 hypothetical protein Csa_018615 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-57
Identity = 129/178 (72.47%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDGKLRYHGGETRLL+V+RSISF+ELL KFG+LCGTS  VSFRC
Sbjct: 18  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSTSVSFRC 77

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLPREDLDALVS+TSDEDLANLIEEYDRAASP SS   KIRAFLSPPK Y K IS PPSS
Sbjct: 78  QLPREDLDALVSVTSDEDLANLIEEYDRAASPSSS--MKIRAFLSPPK-YAKRIS-PPSS 137

Query: 121 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW 176
           ++S SSS++  HRC R +S P+  SY ERS S VP  + N+ G+  S  +F+H+ NSW
Sbjct: 138 MTSFSSSVA--HRCFRRMSPPS-PSYLERSSSAVPFSVYNIQGSCASSHMFLHSGNSW 188

[Close]

BLAST of MS000920 vs. ExPASy TrEMBL
Match: A0A6J1BRT0 (uncharacterized protein LOC111005121 OS=Momordica charantia OX=3673 GN=LOC111005121 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 8.7e-96
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC
Sbjct: 12  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 71

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS
Sbjct: 72  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 131

Query: 121 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG 177
           LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
Sbjct: 132 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG 187

[Close]

BLAST of MS000920 vs. ExPASy TrEMBL
Match: A0A6J1HAZ2 (uncharacterized protein LOC111462427 OS=Cucurbita moschata OX=3662 GN=LOC111462427 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.0e-59
Identity = 129/181 (71.27%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRC
Sbjct: 76  TIKFLCSYGGKILPRYPDGELRYHGGETRLLAFNRSISFSDLLLKFGELCGTSISVSFRC 135

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPP-- 120
           QLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KIRAFL PPK Y K ISPP   
Sbjct: 136 QLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSLKIRAFLFPPK-YAKRISPPSSM 195

Query: 121 ---SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANS 176
              SS SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN   
Sbjct: 196 PSFSSSSSSLSSMSAAHRCFRRMS-PPHASYLERSASAVPCSVYNIQGSSSRMFVHNGRC 252

[Close]

BLAST of MS000920 vs. ExPASy TrEMBL
Match: A0A6J1K2Y4 (uncharacterized protein LOC111491906 OS=Cucurbita maxima OX=3661 GN=LOC111491906 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.2e-58
Identity = 128/180 (71.11%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDG+LRY GGETRLLA +RSISF++LL KFG+LCGTS+ VSFRC
Sbjct: 18  TIKFLCSYGGKILPRYPDGELRYRGGETRLLAFNRSISFSDLLLKFGELCGTSISVSFRC 77

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KIRAFL PPK Y K ISPP S 
Sbjct: 78  QLPKEDLDALVSITSDEDLANLIEEYDRAAS--SSSSLKIRAFLFPPK-YAKRISPPSSM 137

Query: 121 L----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW 176
                SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Sbjct: 138 ASFFSSSSLSSMSAAHRCFRRMS-PPHASYSERSASAVPCSVYNIQGSSSRMFVHNGRSW 193

[Close]

BLAST of MS000920 vs. ExPASy TrEMBL
Match: A0A0A0LKJ2 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G349080 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.2e-58
Identity = 129/178 (72.47%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPRYPDGKLRYHGGETRLL+V+RSISF+ELL KFG+LCGTS  VSFRC
Sbjct: 18  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSTSVSFRC 77

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLPREDLDALVS+TSDEDLANLIEEYDRAASP SS   KIRAFLSPPK Y K IS PPSS
Sbjct: 78  QLPREDLDALVSVTSDEDLANLIEEYDRAASPSSS--MKIRAFLSPPK-YAKRIS-PPSS 137

Query: 121 LSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW 176
           ++S SSS++  HRC R +S P+  SY ERS S VP  + N+ G+  S  +F+H+ NSW
Sbjct: 138 MTSFSSSVA--HRCFRRMSPPS-PSYLERSSSAVPFSVYNIQGSCASSHMFLHSGNSW 188

[Close]

BLAST of MS000920 vs. ExPASy TrEMBL
Match: A0A5B6ZZM6 (Putative Octicosapeptide/Phox/Bem1p family protein isoform 1 OS=Davidia involucrata OX=16924 GN=Din_019473 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.2e-50
Identity = 122/199 (61.31%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGGKILPR+PDGKLRYHGGETR+LAV RSISF ELL K G+LCG S  VS RC
Sbjct: 14  TIKFLCSYGGKILPRHPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCGKS--VSLRC 73

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYTKNISPPPSS 120
           QLP EDLDALVSITSDEDLANLIEEYDRAASPPSS   KIRAFLSPPK  +K ISPPPS+
Sbjct: 74  QLPTEDLDALVSITSDEDLANLIEEYDRAASPPSS--LKIRAFLSPPK-SSKKISPPPST 133

Query: 121 LSSSS---------------------SSMSPPHRCSRHISLP--NHNSYFERSVSVPLIL 176
            +SSS                     SS  P +RC RHIS P      Y + +  +P   
Sbjct: 134 TASSSTDAASSKSSSSYSTAAAVGSTSSSPPSNRCFRHISAPVVFPLCYEKSAGKLPHYA 193

[Close]

BLAST of MS000920 vs. TAIR 10
Match: AT3G26510.3 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVS 60
           T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+
Sbjct: 9   TIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGGVGGSITVT 68

Query: 61  FRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYT-KNISP 120
            RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS   KIR FL+PPK       SP
Sbjct: 69  IRCQLPTEDLDALVSITSDEDLVNLIEEYDLVS---SSSPMKIRVFLNPPKSAAGSKKSP 128

Query: 121 PP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRR 176
           PP          SS ++SS+S SP         LP            P   C +H NSR 
Sbjct: 129 PPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRN 188

[Close]

BLAST of MS000920 vs. TAIR 10
Match: AT3G26510.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVS 60
           T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+
Sbjct: 9   TIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGGVGGSITVT 68

Query: 61  FRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYT-KNISP 120
            RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS   KIR FL+PPK       SP
Sbjct: 69  IRCQLPTEDLDALVSITSDEDLVNLIEEYDLVS---SSSPMKIRVFLNPPKSAAGSKKSP 128

Query: 121 PP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRR 176
           PP          SS ++SS+S SP         LP            P   C +H NSR 
Sbjct: 129 PPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRN 188

[Close]

BLAST of MS000920 vs. TAIR 10
Match: AT3G26510.2 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVS 60
           T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+
Sbjct: 9   TIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGGVGGSITVT 68

Query: 61  FRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYT-KNISP 120
            RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS   KIR FL+PPK       SP
Sbjct: 69  IRCQLPTEDLDALVSITSDEDLVNLIEEYDLVS---SSSPMKIRVFLNPPKSAAGSKKSP 128

Query: 121 PP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRR 176
           PP          SS ++SS+S SP         LP            P   C +H NSR 
Sbjct: 129 PPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRN 188

[Close]

BLAST of MS000920 vs. TAIR 10
Match: AT3G26510.4 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 101/190 (53.16%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVS 60
           T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+
Sbjct: 9   TIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGGVGGSITVT 68

Query: 61  FRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLYT-KNISP 120
            RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS   KIR FL+PPK       SP
Sbjct: 69  IRCQLPTEDLDALVSITSDEDLVNLIEEYDLVS---SSSPMKIRVFLNPPKSAAGSKKSP 128

Query: 121 PP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRR 176
           PP          SS ++SS+S SP         LP            P   C +H NSR 
Sbjct: 129 PPLALPSSTTTSSSSTTSSTSSSPRSPSLSKPPLPPSPPRITTVTKNPCYGCYVHRNSRN 188

[Close]

BLAST of MS000920 vs. TAIR 10
Match: AT1G70640.1 (octicosapeptide/Phox/Bem1p (PB1) domain-containing protein )

HSP 1 Score: 154.5 bits (389), Expect = 8.2e-38
Identity = 91/164 (55.49%), Postives = 110/164 (67.07%), Query Frame = 0


Query: 1   TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRC 60
           T+KFLCSYGG+I PRYPDGKLRY GG+TR+L+V+R+ISFTEL  K G++CG +V  S RC
Sbjct: 7   TVKFLCSYGGRITPRYPDGKLRYQGGDTRVLSVTRAISFTELKKKLGEICGIAV-TSLRC 66

Query: 61  QLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPK--LYTKNISPPP 120
           QLP +DLDALV++ SDEDL NL+EEYD A +       KI  FLSP K    T N SPPP
Sbjct: 67  QLPTDDLDALVTVRSDEDLKNLMEEYDLAITA----QVKIHVFLSPLKSTRTTANSSPPP 126

Query: 121 SSLSSSSS--------SMSPPHRCSRHI--SLPNHNSYFERSVS 153
           S+ SSSSS        S S P  C   +  S+ N+  Y  RS S
Sbjct: 127 STTSSSSSKSRSRSPPSPSTPETCPSCVERSIRNNGCYVHRSPS 165

The following BLAST results are available for this feature:

BLAST of MS000920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132205.1	1.8e-95	100.00	uncharacterized protein LOC111005121 [Momordica charantia]	[more]
XP_023545452.1	1.1e-60	72.22	uncharacterized protein LOC111804876 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961752.1	1.0e-58	71.27	uncharacterized protein LOC111462427 [Cucurbita moschata]	[more]
XP_022996772.1	8.7e-58	71.11	uncharacterized protein LOC111491906 [Cucurbita maxima]	[more]
XP_004142964.1	1.5e-57	72.47	uncharacterized protein LOC101207008 [Cucumis sativus] >XP_031736384.1 uncharact...	[more]

BLAST of MS000920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS000920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRT0	8.7e-96	100.00	uncharacterized protein LOC111005121 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1HAZ2	5.0e-59	71.27	uncharacterized protein LOC111462427 OS=Cucurbita moschata OX=3662 GN=LOC1114624...	[more]
A0A6J1K2Y4	4.2e-58	71.11	uncharacterized protein LOC111491906 OS=Cucurbita maxima OX=3661 GN=LOC111491906...	[more]
A0A0A0LKJ2	7.2e-58	72.47	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G349080 PE=4 SV...	[more]
A0A5B6ZZM6	7.2e-50	61.31	Putative Octicosapeptide/Phox/Bem1p family protein isoform 1 OS=Davidia involucr...	[more]

BLAST of MS000920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26510.3	2.5e-42	53.16	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.1	2.5e-42	53.16	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.2	2.5e-42	53.16	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.4	2.5e-42	53.16	Octicosapeptide/Phox/Bem1p family protein	[more]
AT1G70640.1	8.2e-38	55.49	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 16..107 e-value: 2.5E-24 score: 96.8
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 18..89 e-value: 1.6E-17 score: 63.2
None	No IPR available	GENE3D	3.10.20.90		coord: 20..101 e-value: 3.0E-9 score: 38.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..134
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 1..142
None	No IPR available	PANTHER	PTHR31066:SF10	OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN	coord: 1..142
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 5..104 e-value: 2.21713E-47 score: 147.752
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 18..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000920.1	MS000920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding