MS000896 (gene) Bitter gourd (TR) v1

Overview


Name	MS000896
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pectin lyase-like superfamily protein
Location	scaffold36: 131804 .. 135150 (-)
RNA-Seq Expression	MS000896
Synteny	MS000896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGGATGAGTTCCAAAAGCTTAACACTCGTGGTTTTTATTGCTTTTCTAGTTTGGTCTTCAAACTTTGAAGCTTGCATTGCAAGGAGGGGGAAACATTGGAGACACGCTAGGGAGGCATCGGCTTCTTTATCTAAGAAGAAAGGCAGTCGTGGCAATAGCAAGAACTACCATTCAGGTGGTTCCAACCCAAGGGCGGCTCCGCCACACAATGCCTCTCCTTCACCTTCAATTTCTCCTAAACCAAAAGAAGAGATCACTCCAACTCCACCCAAAAAAGGCTACAATGGTGGCGATTCTGCCATATTCAACGTTCTAGATTTTGGTGCTAAAGGCAATGGAGAGACTGATGACACTAAGGTAAATTACCTTCGATTCTCCCATATTCAACCTTCTTTTTCCCCCTACAGAAAAACTTGGAAATTGACATCTAACCGAATTTGGTCGTTGCAAATACCATAACTATCCAACAGCTTAAGGTAAGCCGGCCATCAGGACCAACTACTAGAACAGGATGGCGTTGGCCCCACAGCCAAGAATATAAAAGATTATAGTTATGGCAGTTTTCTTGAAACATAATGATGTAATGTGGCGGAGAAGAATATAATAAATCGAATACCATTAACCGATCGAAAACTGGTTTGGGTACTTAGAAAATACTTGTACGATCGGTTTCAGGCATTTGAAGACGCTTGGGCAGCCGCTTGTAAGGTGGAGGGATCGACGGTCATGGTGCCAGCAGAATATGTGTTCTTCGTGGGACCCATTTCCTTCTCTGGCCCATATTGCCAACCAGACATTGTATTTCAGGTAAACATGATCGTCTCCACCGTGTTATCTTTTAATACTATTATAACTTTTACATATATATCCTATACCCGGGACACCCATGCCCGCCTCAAGGCGCTATTACAATTTATATTAGCTAATTTAAAATAAATTTGCAGCTGGATGGAACAATTATCGCTCCGACTGATCACCAAACTTGGGGGAAAGGTCTGTTACAATGGATCCAATTTACAAAGCTGCTAGGGATTACCATCCGGGGTACTGGAGTAATCGACGGAAGAGGATCCGTCTGGTGGCAAGATTCATCCTTTGATGAGCCTGTAGATGATGAGATGAAACTAATAATCCCCATAAAAGATCCCAGAGAAGAAACAAAACCGACGCCGGTAATGAACCCTATCTATACTCTATAGTGCGTTTTTCTTCCTCTAGTGGTAAAACTTAAAAAAAAAAAAAAGGAAAAGGAAAAGGAAAATGATCGTGGTTCAATCCTAAAATATGTGGCAGGTGGGAAGCAACCTAGTAGGGAAAATGCCAAGCATCAAGCCCACTGTAAGGATCGCCCACTAGCAGAACTCCTAAGATGATTTCATTATATTTATGGCCTCGTCATCCTCAATCCTCATCCTGTACAATTAATTGAAATGTTTTGTCACACTCACACAGGCACTTAGGTTTTATGGAAGCTTCAATGTTACGGTCACGGGCATAACAATTCAAAACAGTCCCCAATGCCACCTCAAGTTCGACAACTGCGTAGGAGTCCTGGTGCATGATATCAGCGTCTCATCTCCTGGAGACAGTCTTAATACTGATGGAATTCACTTGCAGAACTCCAAAGACGTTCTAATCCACAGCACCAGTCTATCTTGTGGTAATTACGTCACTTCCAATTACCTTACCCTGTTTTTAGATATTATCAACTACAATGGCGGGGCTCAGTAAGGGAGTGCACGTCTTGAGATAAACTGAACACTAGTCATTCCATCACCACAACAACTTAAAGGGAGAATTTGATGGATAAAATTTAAAATATCTACATAAAATGTTATAGAGCCCTCAACACATGCAACCTTATCCACTATGGAGACTTAGAGTCTTTCACTACCCCAATTTGTAACCATTAAAAGATTGACACGTCACAATAATCATTCTTCTATCCATATAATGTTCCTACCAATTATATGTTCTGTTGCCAGAATACTTATTTTGTCTGCAATATTCAGTTTTTAGTTTTTATAAGCACATAACTTGTTTCTATCCTTCCACTTCATGTCTGCTTGTTCTAACACGAGGGTCCACTGATCTTGATATTGAACAATGCTATTAGATAGACCCTAAAGTTAACCAACACCTCTCTCTCTCTCTCTCTCTCAAGAAAATCCCTTCCATGATGTACCCCAAGCCCCACTATTCTGCCACTTTTTGTGCCTAAAAGTTATGAAAGCTAAGACCTATTGTAATAGTGATTCGGAAATATGTGTGCAATACTTCAAGAATTTTACCACATAGGTTTTAATAACGAAGAAGAAGGAAAAAAAAACATGGACAATGAGTATGAAACATAAGGAAATCTTAGGTATGAGTTCGAAGTTAAACAGAACAGATGACTAATTATCTTCTTTACTCTGATCCTTTCAGGAGATGATTGTATTTCTATTCAAACTGGATGCTCAAACGTATACATACACAATGTGAACTGCGGGCCAGGACATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACAAAAGCTTGTGTTTCAAACATAACCGTTCGAGATGTCATAATGCATGACACAATGAATGGTGTTAGAATCAAAACATGGCAGGTACTTATGTTTATAAAGGAAAATATGTGCTTCATCATGTGCTCACTCACAAATGAACAAGCTCTCTAATGGATAATAAGAAAAAATAAACAAAGATGTGTACTCGTAGGCTTAAAGCAAATACCTTAAAAAAAATTAAGAATCTACATGAGAAGGAATTGGTTTCAGAACCACAATGCTGTTAAAGTTACACAAAAACAATCATAGTTAATGACATTTTATAATGAACAACCTTGCATTTTTTTAATTTTGAGACCCCGTAAATCATCTATAATGTTAAGTATTGAATATCCATGCGTATTGATAGAATGTCGAATGATACCTTTACAGGGTGGGTCAGGCTCTGTTCAGAATGTTCTCTTCTCAAACATTCAAATGTCTGAAGTTCAATTACCAATTGTGATTGACCAATTTTATTGCGACAAAGCAAAATGCAGCAACCAGACTTCAGCAGTGGCTCTATCAGGAATCAATTATGAGAAAATCAGAGGGACTTACACAGTTAAGCCAGTACACTTCGCCTGTAGTGACAACTTACCATGTACAGACGTAACGCTGACTACTATAGAGCTAAAACCCCTGCAAGAGCGCTATCACCTATATGATCCTTTCTGCTGGCAGACTTTTGGAGAACTGAAAACTCCTACTTTACCGCCAATTGGATGCTTACAGATTGGCAAGCCATCTAGCAACAGAGTTCAGTATGAAGAAAATGATTCCTGT

mRNA sequence

ATGAGTGGGATGAGTTCCAAAAGCTTAACACTCGTGGTTTTTATTGCTTTTCTAGTTTGGTCTTCAAACTTTGAAGCTTGCATTGCAAGGAGGGGGAAACATTGGAGACACGCTAGGGAGGCATCGGCTTCTTTATCTAAGAAGAAAGGCAGTCGTGGCAATAGCAAGAACTACCATTCAGGTGGTTCCAACCCAAGGGCGGCTCCGCCACACAATGCCTCTCCTTCACCTTCAATTTCTCCTAAACCAAAAGAAGAGATCACTCCAACTCCACCCAAAAAAGGCTACAATGGTGGCGATTCTGCCATATTCAACGTTCTAGATTTTGGTGCTAAAGGCAATGGAGAGACTGATGACACTAAGGCATTTGAAGACGCTTGGGCAGCCGCTTGTAAGGTGGAGGGATCGACGGTCATGGTGCCAGCAGAATATGTGTTCTTCGTGGGACCCATTTCCTTCTCTGGCCCATATTGCCAACCAGACATTGTATTTCAGCTGGATGGAACAATTATCGCTCCGACTGATCACCAAACTTGGGGGAAAGGTCTGTTACAATGGATCCAATTTACAAAGCTGCTAGGGATTACCATCCGGGGTACTGGAGTAATCGACGGAAGAGGATCCGTCTGGTGGCAAGATTCATCCTTTGATGAGCCTGTAGATGATGAGATGAAACTAATAATCCCCATAAAAGATCCCAGAGAAGAAACAAAACCGACGCCGGTGGGAAGCAACCTAGTAGGGAAAATGCCAAGCATCAAGCCCACTGCACTTAGGTTTTATGGAAGCTTCAATGTTACGGTCACGGGCATAACAATTCAAAACAGTCCCCAATGCCACCTCAAGTTCGACAACTGCGTAGGAGTCCTGGTGCATGATATCAGCGTCTCATCTCCTGGAGACAGTCTTAATACTGATGGAATTCACTTGCAGAACTCCAAAGACGTTCTAATCCACAGCACCAGTCTATCTTGTGGAGATGATTGTATTTCTATTCAAACTGGATGCTCAAACGTATACATACACAATGTGAACTGCGGGCCAGGACATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACAAAAGCTTGTGTTTCAAACATAACCGTTCGAGATGTCATAATGCATGACACAATGAATGGTGTTAGAATCAAAACATGGCAGGGTGGGTCAGGCTCTGTTCAGAATGTTCTCTTCTCAAACATTCAAATGTCTGAAGTTCAATTACCAATTGTGATTGACCAATTTTATTGCGACAAAGCAAAATGCAGCAACCAGACTTCAGCAGTGGCTCTATCAGGAATCAATTATGAGAAAATCAGAGGGACTTACACAGTTAAGCCAGTACACTTCGCCTGTAGTGACAACTTACCATGTACAGACGTAACGCTGACTACTATAGAGCTAAAACCCCTGCAAGAGCGCTATCACCTATATGATCCTTTCTGCTGGCAGACTTTTGGAGAACTGAAAACTCCTACTTTACCGCCAATTGGATGCTTACAGATTGGCAAGCCATCTAGCAACAGAGTTCAGTATGAAGAAAATGATTCCTGT

Coding sequence (CDS)

ATGAGTGGGATGAGTTCCAAAAGCTTAACACTCGTGGTTTTTATTGCTTTTCTAGTTTGGTCTTCAAACTTTGAAGCTTGCATTGCAAGGAGGGGGAAACATTGGAGACACGCTAGGGAGGCATCGGCTTCTTTATCTAAGAAGAAAGGCAGTCGTGGCAATAGCAAGAACTACCATTCAGGTGGTTCCAACCCAAGGGCGGCTCCGCCACACAATGCCTCTCCTTCACCTTCAATTTCTCCTAAACCAAAAGAAGAGATCACTCCAACTCCACCCAAAAAAGGCTACAATGGTGGCGATTCTGCCATATTCAACGTTCTAGATTTTGGTGCTAAAGGCAATGGAGAGACTGATGACACTAAGGCATTTGAAGACGCTTGGGCAGCCGCTTGTAAGGTGGAGGGATCGACGGTCATGGTGCCAGCAGAATATGTGTTCTTCGTGGGACCCATTTCCTTCTCTGGCCCATATTGCCAACCAGACATTGTATTTCAGCTGGATGGAACAATTATCGCTCCGACTGATCACCAAACTTGGGGGAAAGGTCTGTTACAATGGATCCAATTTACAAAGCTGCTAGGGATTACCATCCGGGGTACTGGAGTAATCGACGGAAGAGGATCCGTCTGGTGGCAAGATTCATCCTTTGATGAGCCTGTAGATGATGAGATGAAACTAATAATCCCCATAAAAGATCCCAGAGAAGAAACAAAACCGACGCCGGTGGGAAGCAACCTAGTAGGGAAAATGCCAAGCATCAAGCCCACTGCACTTAGGTTTTATGGAAGCTTCAATGTTACGGTCACGGGCATAACAATTCAAAACAGTCCCCAATGCCACCTCAAGTTCGACAACTGCGTAGGAGTCCTGGTGCATGATATCAGCGTCTCATCTCCTGGAGACAGTCTTAATACTGATGGAATTCACTTGCAGAACTCCAAAGACGTTCTAATCCACAGCACCAGTCTATCTTGTGGAGATGATTGTATTTCTATTCAAACTGGATGCTCAAACGTATACATACACAATGTGAACTGCGGGCCAGGACATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACAAAAGCTTGTGTTTCAAACATAACCGTTCGAGATGTCATAATGCATGACACAATGAATGGTGTTAGAATCAAAACATGGCAGGGTGGGTCAGGCTCTGTTCAGAATGTTCTCTTCTCAAACATTCAAATGTCTGAAGTTCAATTACCAATTGTGATTGACCAATTTTATTGCGACAAAGCAAAATGCAGCAACCAGACTTCAGCAGTGGCTCTATCAGGAATCAATTATGAGAAAATCAGAGGGACTTACACAGTTAAGCCAGTACACTTCGCCTGTAGTGACAACTTACCATGTACAGACGTAACGCTGACTACTATAGAGCTAAAACCCCTGCAAGAGCGCTATCACCTATATGATCCTTTCTGCTGGCAGACTTTTGGAGAACTGAAAACTCCTACTTTACCGCCAATTGGATGCTTACAGATTGGCAAGCCATCTAGCAACAGAGTTCAGTATGAAGAAAATGATTCCTGT

Protein sequence

MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHSGGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC

Homology

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BLAST of MS000896 vs. NCBI nr
Match: XP_022131822.1 (polygalacturonase At1g48100-like [Momordica charantia])

HSP 1 Score: 1072.0 bits (2771), Expect = 1.6e-309
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT
Sbjct: 182 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG
Sbjct: 242 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. NCBI nr
Match: XP_023547161.1 (polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1002.7 bits (2591), Expect = 1.2e-288
Identity = 483/520 (92.88%), Postives = 500/520 (96.15%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLV+FIAFLVWSSNFEACIARRGKHWR +REASASLSKKKGS G SK++HS
Sbjct: 65  MSGMSSKSLTLVLFIAFLVWSSNFEACIARRGKHWRQSREASASLSKKKGSHGGSKSHHS 124

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGS+ +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 125 GGSHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 184

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTD QTWG
Sbjct: 185 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDRQTWG 244

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+GVIDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 245 KGLLQWIQFTKLVGITIRGSGVIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRAETKPT 304

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 305 PIGSNLDGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 364

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 365 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 424

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 425 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 484

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 485 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 544

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 545 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 584

[Close]

BLAST of MS000896 vs. NCBI nr
Match: XP_022961637.1 (polygalacturonase At1g48100-like [Cucurbita moschata])

HSP 1 Score: 1002.7 bits (2591), Expect = 1.2e-288
Identity = 483/520 (92.88%), Postives = 500/520 (96.15%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR +R+ASASLSKKKGS G SK++HS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQSRDASASLSKKKGSHGGSKSHHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGS+ +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGSHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTD QTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDRQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+GVIDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 182 KGLLQWIQFTKLVGITIRGSGVIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRAETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 242 PIGSNLDGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. NCBI nr
Match: KAG7029199.1 (Polygalacturonase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1000.0 bits (2584), Expect = 7.7e-288
Identity = 483/520 (92.88%), Postives = 499/520 (95.96%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR +REASASLSKKKGS G SK++HS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQSREASASLSKKKGSHGGSKSHHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGS+ +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGSHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTD QTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDRQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+GVIDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 182 KGLLQWIQFTKLVGITIRGSGVIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRVETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL  KMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 242 PIGSNLDVKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. NCBI nr
Match: XP_022997615.1 (polygalacturonase At1g48100-like [Cucurbita maxima] >XP_022997616.1 polygalacturonase At1g48100-like [Cucurbita maxima] >XP_022997617.1 polygalacturonase At1g48100-like [Cucurbita maxima])

HSP 1 Score: 998.0 bits (2579), Expect = 2.9e-287
Identity = 480/520 (92.31%), Postives = 499/520 (95.96%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR +REASASLSKKKGS G SK++HS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQSREASASLSKKKGSHGGSKSHHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GG + +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGFHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVF+VGPISFSGPYCQP+IVFQLDGTIIAPTD QTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFYVGPISFSGPYCQPNIVFQLDGTIIAPTDRQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+G+IDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 182 KGLLQWIQFTKLVGITIRGSGIIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRAETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 242 PIGSNLDGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. ExPASy Swiss-Prot
Match: Q949Z1 (Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 2.1e-110
Identity = 216/475 (45.47%), Postives = 289/475 (60.84%), Query Frame = 0


Query: 57  NYHSGG---SNPRAAPPHNASPSPSISPKPKEEITPTP-PKKGYNGGDS---AIFNVLDF 116
           +YH G    ++P   PP    P P  +  P +++   P P      GDS    +F+V  F
Sbjct: 30  HYHKGRHGVTHPLPPPP----PPPLETANPPDQVPSDPYPSPDPAPGDSDSGCVFDVTSF 89

Query: 117 GAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGT 176
           GA G+G  DDT AF+DAW AAC VE   V+ P   VF +    FSGP C+P +VFQLDG 
Sbjct: 90  GAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLDGV 149

Query: 177 IIAPTDHQTWGK--GLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLI 236
           ++ P   + W +     QW+ F +L G T  G G ++G G  WW                
Sbjct: 150 LMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWD--------------- 209

Query: 237 IPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCV 296
           +P K  R      P GS+  G  P   PT +RF+ S N+ V G+ IQNSPQ H+KFD C 
Sbjct: 210 LPCKPHR-----GPDGSSSSG--PCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQ 269

Query: 297 GVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCG 356
           GVL+++I +SSP  S NTDGIHL N++ V I+++ +S GDDCISI TGCS+V I  V CG
Sbjct: 270 GVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCG 329

Query: 357 PGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSE 416
           P HGISIGSLG  N++ACVSNITVR+ ++ D+ NG+R+KTWQGG+GSV N+LF NIQM  
Sbjct: 330 PSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMEN 389

Query: 417 VQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVK--PVHFACSDNLPCTDVTL 476
           V   I++DQ+YC    C N+TSAV +  + Y  I+GTY V+  P+HFACSD + CT++T+
Sbjct: 390 VLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITM 449

Query: 477 TTIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           + +EL P +E   + DPFCW  +G+ +T T+PPI CL  G P      Y+ N  C
Sbjct: 450 SEVELLP-EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSPVVEEA-YDSNYGC 475

[Close]

BLAST of MS000896 vs. ExPASy Swiss-Prot
Match: Q94AJ5 (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.7e-81
Identity = 167/431 (38.75%), Postives = 236/431 (54.76%), Query Frame = 0


Query: 72  NASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDTKAFEDAWAAAC 131
           NA+   S+   P+ +   T P+         + +V +FGAKGNG TDDTKAF DAW  AC
Sbjct: 27  NANSFESLLQLPRRQSRSTRPR------SERLLHVGNFGAKGNGVTDDTKAFADAWKTAC 86

Query: 132 KVEGST-VMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTW-GKGLLQWIQF 191
             +  T ++VP  Y   + PI  SGP C+  +  Q+ GTIIAP D   W G    +W+ F
Sbjct: 87  SSKVKTRILVPENYTCLLRPIDLSGP-CKARLTLQISGTIIAPNDPDVWEGLNRRKWLYF 146

Query: 192 TKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPTPVGSNLVGK 251
             L  +T+ G G ++G G  WW+ S                    +     P        
Sbjct: 147 HGLSRLTVEGGGTVNGMGQEWWERSC-------------------KHNHSNPCRG----- 206

Query: 252 MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIH 311
                PTAL F+   N+ V  + + +S Q H+   +C  V +  + V +P  S NTDGIH
Sbjct: 207 ----APTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIH 266

Query: 312 LQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTKACVSNI 371
           +  S+ ++I +T++S GDDCISI    + + I N+ CGPGHGISIGSLGK  +   V +I
Sbjct: 267 ISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDI 326

Query: 372 TVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK-CSNQT 431
           TV   I+ DT NGVRIKTWQGGSG V  ++F NI+M+ V  PI+IDQ+YCD  K C+NQT
Sbjct: 327 TVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQT 386

Query: 432 SAVALSGINYEKIRGTYTVK-PVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPFCWQT 491
           SA+++  I++  +RGT   K  +  +CSD+ PC ++ L  I+L+P        + FCW+ 
Sbjct: 387 SAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEP-SNGDGFTESFCWEA 421

Query: 492 FGELKTPTLPP 499
           +G       PP
Sbjct: 447 YGSSSGQVYPP 421

[Close]

BLAST of MS000896 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.2e-78
Identity = 156/373 (41.82%), Postives = 217/373 (58.18%), Query Frame = 0


Query: 101 SAIFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQP 160
           + +FNV  +GA G+G+ D T+AF   W AACK   + ++VPA   FFV  + F GP CQP
Sbjct: 56  ATVFNVEQYGAVGDGKHDSTEAFATTWNAACKKASAVLLVPANKKFFVNNLVFRGP-CQP 115

Query: 161 DIVFQLDGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPV 220
            + F++DGTI+A  D   W K    W+QF +L    + GTGVIDG+G  WW         
Sbjct: 116 HLSFKVDGTIVAQPDPARW-KNSKIWLQFAQLTDFNLMGTGVIDGQGQQWWA-------- 175

Query: 221 DDEMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCH 280
             + K++               G  +       +PTA++   S +VTV  +T+ NSP+ H
Sbjct: 176 -GQCKVV--------------NGRTVCNDRN--RPTAIKIDYSKSVTVKELTLMNSPEFH 235

Query: 281 LKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVY 340
           L F  C GV +  + + +P DS NTDGI +  SK   I    +  GDDCI+I TG SN+ 
Sbjct: 236 LVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNIT 295

Query: 341 IHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLF 400
           I ++ CGPGHGISIGSLG+DN++A VS++ V      DT NG+RIKTWQGGSG    + +
Sbjct: 296 IKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITY 355

Query: 401 SNIQMSEVQLPIVIDQFYCDKAK-CSNQTSAVALSGINYEKIRGT-YTVKPVHFACSDNL 460
            N++M   + PI+I+QFYC  A  C NQ SAV + G+ Y+ I GT  T   +   CSD++
Sbjct: 356 ENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSV 401

Query: 461 PCTDVTLTTIELK 472
           PCT + L+ + LK
Sbjct: 416 PCTGIQLSNVSLK 401

[Close]

BLAST of MS000896 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.6e-78
Identity = 155/371 (41.78%), Postives = 220/371 (59.30%), Query Frame = 0


Query: 103 IFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDI 162
           IFNV  +GA G+G+ D T+AF  AW AACK   + ++VP    F V  + F+GP CQP  
Sbjct: 58  IFNVEKYGAVGDGKHDCTEAFSTAWQAACKKPSAMLLVPGNKKFVVNNLFFNGP-CQPHF 117

Query: 163 VFQLDGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDD 222
            F++DG I A  +  +W    + W+QF KL G T+ G GVIDG+G  WW           
Sbjct: 118 TFKVDGIIAAYQNPASWKNNRI-WLQFAKLTGFTLMGKGVIDGQGKQWWA---------G 177

Query: 223 EMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLK 282
           + K +    + RE                  +PTA++F  S  + + G+ + NSP+ HL 
Sbjct: 178 QCKWV----NGREICNDRD------------RPTAIKFDFSTGLIIQGLKLMNSPEFHLV 237

Query: 283 FDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIH 342
           F NC GV +  IS+++P DS NTDGI +  SK+  +   ++  GDDC++I TG SN+ I 
Sbjct: 238 FGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIE 297

Query: 343 NVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSN 402
           ++ CGPGHGISIGSLG++N++A VS + V      DT NG+RIKTWQGGSG   ++++ N
Sbjct: 298 DLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYEN 357

Query: 403 IQMSEVQLPIVIDQFYCDKAK-CSNQTSAVALSGINYEKIRGT-YTVKPVHFACSDNLPC 462
           ++M   + PI+I+QFYC  A  C NQ SAV +  + Y+ IRGT  T   +   CSD++PC
Sbjct: 358 VEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPC 401

Query: 463 TDVTLTTIELK 472
            D+ L+ I LK
Sbjct: 418 KDIKLSDISLK 401

[Close]

BLAST of MS000896 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.1e-78
Identity = 156/373 (41.82%), Postives = 215/373 (57.64%), Query Frame = 0


Query: 101 SAIFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQP 160
           S   NV DFGAKG+G  DDTKAFE AW AAC    S V++  +  + V PISFSGP C+ 
Sbjct: 87  SKTVNVDDFGAKGDGR-DDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGP-CKS 146

Query: 161 DIVFQLDGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPV 220
            +  Q+ GTI A  D   + K    W+ F  +  + + G G I+G G +WWQ+S      
Sbjct: 147 GLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSC----- 206

Query: 221 DDEMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCH 280
             +    +P KD                      PTAL FY S +V V  + I+N+ Q H
Sbjct: 207 --KTNKALPCKD---------------------APTALTFYKSKHVIVKNLKIENAQQIH 266

Query: 281 LKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVY 340
           + FDNCV V   ++ V++P +S NTDGIH+  ++++ I S  +  GDDCISI  G   V 
Sbjct: 267 VSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVR 326

Query: 341 IHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLF 400
           ++++ CGPGHGISIGSLG  N++A VS++ V    +  T NGVRIKTWQGGSGS  N+ F
Sbjct: 327 VNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKF 386

Query: 401 SNIQMSEVQLPIVIDQFYCDKAK-CSNQTSAVALSGINYEKIRGTYTVK-PVHFACSDNL 460
            N++M  V+ PI+IDQ YCD+ K C  Q+SAV +  + Y+ I+GT      + F CS   
Sbjct: 387 QNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRF 429

Query: 461 PCTDVTLTTIELK 472
           PC  + L  ++L+
Sbjct: 447 PCQGIVLEDVDLE 429

[Close]

BLAST of MS000896 vs. ExPASy TrEMBL
Match: A0A6J1BS35 (polygalacturonase At1g48100-like OS=Momordica charantia OX=3673 GN=LOC111004888 PE=3 SV=1)

HSP 1 Score: 1072.0 bits (2771), Expect = 7.7e-310
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT
Sbjct: 182 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG
Sbjct: 242 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. ExPASy TrEMBL
Match: A0A6J1HAQ2 (polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111462351 PE=3 SV=1)

HSP 1 Score: 1002.7 bits (2591), Expect = 5.8e-289
Identity = 483/520 (92.88%), Postives = 500/520 (96.15%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR +R+ASASLSKKKGS G SK++HS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQSRDASASLSKKKGSHGGSKSHHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GGS+ +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGSHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTD QTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDRQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+GVIDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 182 KGLLQWIQFTKLVGITIRGSGVIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRAETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 242 PIGSNLDGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. ExPASy TrEMBL
Match: A0A6J1K7Y9 (polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111492497 PE=3 SV=1)

HSP 1 Score: 998.0 bits (2579), Expect = 1.4e-287
Identity = 480/520 (92.31%), Postives = 499/520 (95.96%), Query Frame = 0


Query: 1   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHS 60
           MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR +REASASLSKKKGS G SK++HS
Sbjct: 2   MSGMSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQSREASASLSKKKGSHGGSKSHHS 61

Query: 61  GGSNPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 120
           GG + +A PPHNASP   I PKPKEEI  TPPKKGYNGGDSAIFNVLDFGAKGNGETDDT
Sbjct: 62  GGFHSKAPPPHNASPPSPIPPKPKEEIVQTPPKKGYNGGDSAIFNVLDFGAKGNGETDDT 121

Query: 121 KAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWG 180
           KAFEDAWAAACKVEGSTVMVPAEYVF+VGPISFSGPYCQP+IVFQLDGTIIAPTD QTWG
Sbjct: 122 KAFEDAWAAACKVEGSTVMVPAEYVFYVGPISFSGPYCQPNIVFQLDGTIIAPTDRQTWG 181

Query: 181 KGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPT 240
           KGLLQWIQFTKL+GITIRG+G+IDGRGSVWWQDSSFDEP+DDEMKLIIPI + R ETKPT
Sbjct: 182 KGLLQWIQFTKLVGITIRGSGIIDGRGSVWWQDSSFDEPIDDEMKLIIPINNTRAETKPT 241

Query: 241 PVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG 300
           P+GSNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHD SVSSPG
Sbjct: 242 PIGSNLDGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDFSVSSPG 301

Query: 301 DSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKD 360
           DSLNTDGIHLQNSKDVLIHS+SLSCGDDC+SIQTGCSNVYIHNVNCGPGHGISIGSLGKD
Sbjct: 302 DSLNTDGIHLQNSKDVLIHSSSLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGSLGKD 361

Query: 361 NTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 420
           +TKACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD
Sbjct: 362 HTKACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCD 421

Query: 421 KAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 480
           KAKC+NQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY
Sbjct: 422 KAKCTNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLY 481

Query: 481 DPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           DPFCWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 482 DPFCWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. ExPASy TrEMBL
Match: A0A0A0LNA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348790 PE=3 SV=1)

HSP 1 Score: 966.1 bits (2496), Expect = 6.0e-278
Identity = 470/517 (90.91%), Postives = 486/517 (94.00%), Query Frame = 0


Query: 4   MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHSGGS 63
           MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWR  R+ASASLSKKKGS G SKN+HSG  
Sbjct: 17  MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQNRDASASLSKKKGSHGGSKNHHSG-- 76

Query: 64  NPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDTKAF 123
               APP   SP P   PKPKEEI  TPPKKG + GDSAIFNVLDFGAKGNGETDDTKAF
Sbjct: 77  ----APP---SPLP---PKPKEEIVQTPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAF 136

Query: 124 EDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWGKGL 183
           EDAWA ACKVEGSTVMVPA+YVFFVGPISFSGPYCQPDI+FQLDGTIIAPTDHQTWGKGL
Sbjct: 137 EDAWAEACKVEGSTVMVPADYVFFVGPISFSGPYCQPDIIFQLDGTIIAPTDHQTWGKGL 196

Query: 184 LQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPTPVG 243
           LQWIQFTKL+GITIRG G+IDGRGSVWWQDSSFDEP+DDEMKLIIP+ +   ETKPTP+G
Sbjct: 197 LQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPVNNTINETKPTPIG 256

Query: 244 SNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSL 303
           SNL GKMPSIKPTALRFYGSFN TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSL
Sbjct: 257 SNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSL 316

Query: 304 NTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTK 363
           NTDGIHLQNSKDVLIHSTSLSCGDDC+SIQTGCSN+YIHNVNCGPGHGISIGSLGKD+TK
Sbjct: 317 NTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTK 376

Query: 364 ACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK 423
           ACVSNITVRDV MHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK
Sbjct: 377 ACVSNITVRDVTMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK 436

Query: 424 CSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPF 483
           CSNQTSAVALSGINYE+IRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPF
Sbjct: 437 CSNQTSAVALSGINYERIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPF 496

Query: 484 CWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           CWQTFGEL+TPT PPIGCLQIGKPSSNRVQYEENDSC
Sbjct: 497 CWQTFGELRTPTSPPIGCLQIGKPSSNRVQYEENDSC 521

[Close]

BLAST of MS000896 vs. ExPASy TrEMBL
Match: A0A6J1GI00 (polygalacturonase At1g48100-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454109 PE=3 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 460/516 (89.15%), Postives = 484/516 (93.80%), Query Frame = 0


Query: 4   MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLSKKKGSRGNSKNYHSGGS 63
           MSSK+LTL VFIAFLVWSSNFE C ARRGKHWR +R+ SASLSKKKGS G SK++H  GS
Sbjct: 1   MSSKTLTLSVFIAFLVWSSNFEGCTARRGKHWRQSRQTSASLSKKKGSHGGSKSHHVSGS 60

Query: 64  NPRAAPPHNASPSPSISPKPKEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDTKAF 123
           NP+A P HNASPS  I PKPKEEI PTPPKKGY G DS IFNVLDFGAKGNGE+DDTKAF
Sbjct: 61  NPKAPPSHNASPSSPIPPKPKEEIIPTPPKKGYKGSDSVIFNVLDFGAKGNGESDDTKAF 120

Query: 124 EDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTWGKGL 183
           EDAW AACKVEGSTVMVPA+YVFFVGPISFSGPYCQPDIVFQLDGTI+APTDH+TWGKGL
Sbjct: 121 EDAWVAACKVEGSTVMVPADYVFFVGPISFSGPYCQPDIVFQLDGTIMAPTDHRTWGKGL 180

Query: 184 LQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPTPVG 243
           LQWIQFTKL+G+TIRG+G+IDGRGSVWWQDSSFDEP+DDEMKLIIP+   R+E KPTPVG
Sbjct: 181 LQWIQFTKLIGVTIRGSGIIDGRGSVWWQDSSFDEPIDDEMKLIIPMNKTRDEAKPTPVG 240

Query: 244 SNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSL 303
           SNL GK+PSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPG+S 
Sbjct: 241 SNLEGKIPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGNSP 300

Query: 304 NTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTK 363
           NTDGIHLQNSKDVLIHSTSLSCGDDC+SIQTGCSN+YIHNVNC PGHGISIGSLGKDNTK
Sbjct: 301 NTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCWPGHGISIGSLGKDNTK 360

Query: 364 ACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK 423
           ACVSNITVRDV MH+TMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK
Sbjct: 361 ACVSNITVRDVTMHNTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAK 420

Query: 424 CSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQERYHLYDPF 483
           CSNQTS VA SGI+YEKIRGTYTVKPVHFACSDN PC DVTLTTIELKPLQERYHL+DPF
Sbjct: 421 CSNQTSGVAQSGIDYEKIRGTYTVKPVHFACSDNQPCRDVTLTTIELKPLQERYHLHDPF 480

Query: 484 CWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDS 520
           CWQTFGELKTPT PPIGCLQIGKPSSNRVQYEENDS
Sbjct: 481 CWQTFGELKTPTSPPIGCLQIGKPSSNRVQYEENDS 516

[Close]

BLAST of MS000896 vs. TAIR 10
Match: AT1G10640.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 719.9 bits (1857), Expect = 1.4e-207
Identity = 350/535 (65.42%), Postives = 419/535 (78.32%), Query Frame = 0


Query: 4   MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASLS-----KKKGSRGNS--- 63
           +S +S+T+++ +A LVWS   E CIARRG+HWRH+  +S+ LS     KK  S GNS   
Sbjct: 7   LSLRSITMMILMAVLVWSVTLETCIARRGRHWRHSHRSSSDLSDSLSNKKPKSHGNSHHH 66

Query: 64  ---KNYHSGGSNPRAAPPHNASP------SPSISPKPKEEITPTPPKKGYNGGDSAIFNV 123
               N H   S P+  P     P      SP +S  PK +  P PP+KG     S +FNV
Sbjct: 67  SSHNNNHHHKSKPKPKPKLKTPPKAHDNNSPVVSGPPKVQPPPLPPQKG-----SQVFNV 126

Query: 124 LDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQL 183
           +DFGAKG+G+ DDTKAFE AW AACK+E S ++VP EY + VGPISFSGPYCQ +IVFQL
Sbjct: 127 MDFGAKGDGKCDDTKAFEAAWVAACKIEASVMLVPPEYTYLVGPISFSGPYCQANIVFQL 186

Query: 184 DGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWW-QDSSFDEPVDDEMK 243
           DGTIIAPTD +TWGKGL+ WI FTKL GI ++G GVIDGRGS WW QDS F   +D + K
Sbjct: 187 DGTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPF---IDSDTK 246

Query: 244 LIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDN 303
           LI+P+ +   +  P P+ S L  +MPSIKPTALRF GSF V VTGITIQNSPQCHLKFD+
Sbjct: 247 LIVPLNNSANQNPPMPIRSELDERMPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDD 306

Query: 304 CVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVN 363
           CVGV+VHDI+VSSPGDS NTDGIHLQN+KDVLIHST+L+CGDDCISIQTGCSNV++HNVN
Sbjct: 307 CVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVN 366

Query: 364 CGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQM 423
           CGPGHGISIGSLGK+ TKACVSNITVRDV MH+TM GVRIKTWQGG GSV+ ++FSNIQ+
Sbjct: 367 CGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQL 426

Query: 424 SEVQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTL 483
           ++VQ+PI I+QFYCD +KC NQTSAVA+ G+ YE+I+GTYTVKPVHFACSDN PC DV L
Sbjct: 427 NQVQIPITINQFYCDHSKCKNQTSAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQL 486

Query: 484 TTIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           ++IELKP+QE+Y +YD +CWQTFGEL TPTLPPI CL+IGKP  N+VQ  ++D C
Sbjct: 487 SSIELKPVQEKYRMYDAYCWQTFGELNTPTLPPIDCLKIGKPPRNKVQ-SDHDVC 532

[Close]

BLAST of MS000896 vs. TAIR 10
Match: AT1G60590.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 716.1 bits (1847), Expect = 2.1e-206
Identity = 346/534 (64.79%), Postives = 424/534 (79.40%), Query Frame = 0


Query: 4   MSSKSLTLVVFIAFLVWSSNFEACIARRGKHWRHAREASASL-----SKKKGSRGNSKNY 63
           ++ +S+T++  +  LVWS+  E CIARRG+HWRH   +S+SL     SKK  S  N+ ++
Sbjct: 7   LTLRSITMMTLVTILVWSATLETCIARRGRHWRHHHRSSSSLSDSLSSKKPKSHENNHHH 66

Query: 64  HSGGSNP----RAAPPHNASPSPSISPKPKEEITPTP-------PKKGYNGGDSAIFNVL 123
            S  S P    +  PP +   SP +S  P+ +  P P       P       DS  FNVL
Sbjct: 67  MSHKSKPKPKMKTQPPKSNDGSPVVSQPPQVQQPPPPHVQPPPTPLPLQPVEDSQQFNVL 126

Query: 124 DFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLD 183
           DFGAKG+G +DDT+AFE AWA+ACKVE ST+++P +Y+F VGPISFSGPYCQ +IVFQL+
Sbjct: 127 DFGAKGDGMSDDTQAFEAAWASACKVEASTMIIPPDYIFLVGPISFSGPYCQANIVFQLE 186

Query: 184 GTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWW-QDSSFDEPVDDEMKL 243
           G I+APTD ++WG GL+ WI+FTKL GITI+G GVIDGRG+VWW QD   D P+DD+ KL
Sbjct: 187 GMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSDYPIDDDFKL 246

Query: 244 IIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNC 303
           I+P+ +  +E  P P+ S L  +MPSIKPTALRFYGS +VTVTGITIQNSPQCHLKFDNC
Sbjct: 247 IVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNC 306

Query: 304 VGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNC 363
           V VLVHD++VSSPGDS NTDGIHLQN++DV+IH+T+L+CGDDCISIQTGCSNVY+HNVNC
Sbjct: 307 VKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNC 366

Query: 364 GPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMS 423
           GPGHGISIGSLGKD+TKACVSNITVRDV+MH+TM GVRIKTWQGG GSV+ +LFSNIQ++
Sbjct: 367 GPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLT 426

Query: 424 EVQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDNLPCTDVTLT 483
           EVQLPIVIDQFYCD +KC N TSAV++ G+ YEKIRGTYTVKPVHFACSD+ PC DV L+
Sbjct: 427 EVQLPIVIDQFYCDHSKCMNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLS 486

Query: 484 TIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
            IELKP+Q +YH+YDPFCW+TFGEL + T+PPI CLQIGKP+ N V + ++D C
Sbjct: 487 GIELKPVQLQYHMYDPFCWKTFGELNSATVPPIDCLQIGKPARNGV-HSDHDIC 539

[Close]

BLAST of MS000896 vs. TAIR 10
Match: AT5G14650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 542.7 bits (1397), Expect = 3.1e-154
Identity = 262/423 (61.94%), Postives = 306/423 (72.34%), Query Frame = 0


Query: 98  GGDSAIFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPY 157
           GG S   NVLD GAKG+G +DDTKAFEDAW  ACKV  ST++VP+   F VGP+SF G  
Sbjct: 45  GGSSGTINVLDHGAKGDGTSDDTKAFEDAWQVACKVAASTLLVPSGSTFLVGPVSFLGKE 104

Query: 158 CQPDIVFQLDGTIIAPTDHQTWGKGLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFD 217
           C+  IVFQL+G IIAPT    WG GLLQWI+F  L GITI+G G+IDGRGSVWW D    
Sbjct: 105 CKEKIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDM--- 164

Query: 218 EPVDDEMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSP 277
                                       +  KMP  KPTALRFYGS  VTV+GITIQNSP
Sbjct: 165 ----------------------------MGTKMPRTKPTALRFYGSNGVTVSGITIQNSP 224

Query: 278 QCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCS 337
           Q HLKFDNC+ + V D + SSPGDS NTDGIHLQNS+D +I+ ++L+CGDDCISIQTGCS
Sbjct: 225 QTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCS 284

Query: 338 NVYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQN 397
           N+ IH+V+CGPGHGISIG LGKDNTKACVSNITVRDV MH+T NGVRIK+WQGGSGSV+ 
Sbjct: 285 NINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSWQGGSGSVKQ 344

Query: 398 VLFSNIQMSEVQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVKPVHFACSDN 457
           V+FSNIQ+S V  PI+IDQ+YCD   C N+TSAVA+S INY  I+GTYT +PV FACSD+
Sbjct: 345 VMFSNIQVSNVANPIIIDQYYCDGGGCHNETSAVAVSNINYINIKGTYTKEPVRFACSDS 404

Query: 458 LPCTDVTLTTIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEEN 517
           LPCT ++L+TIELKP   +    DPFCW+  GELKT TLPPI CL+  K S        N
Sbjct: 405 LPCTGISLSTIELKPATGKASSLDPFCWKAHGELKTKTLPPIQCLKTEK-SPEAASRSNN 435

Query: 518 DSC 521
           D+C
Sbjct: 465 DAC 435

[Close]

BLAST of MS000896 vs. TAIR 10
Match: AT3G26610.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-111
Identity = 203/448 (45.31%), Postives = 285/448 (63.62%), Query Frame = 0


Query: 84  KEEITPTPPKKGYNGGDSAIFNVLDFGAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAE 143
           K   T +P    Y   +  +FN+  +GAKG+G +DD+KA   AW AACKV G  V +PA 
Sbjct: 47  KNTPTGSPAPAPYPSTNEGVFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGKVEIPAG 106

Query: 144 YVFFVGPISFSGPYCQPDIVFQLDGTIIAPTDHQTW-GKGLLQWIQFTKLLGITIRGTGV 203
             F V  ++  GP C+ + V Q++G ++AP    +W    L QW+ F  +  +TI+G+G 
Sbjct: 107 TQFLVKAVTLQGP-CKEETVVQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGT 166

Query: 204 IDGRGSVWWQDSSFDEPVDDEMKLIIPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYG 263
           ++GRG  WW   ++     ++                          +P +KPTALRFY 
Sbjct: 167 LNGRGYNWWNLDTYQTQTRNKY-------------------------IPPMKPTALRFYS 226

Query: 264 SFNVTVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTS 323
           S NVTV  I+I NSP CHLKFD+  GV V++I++SSP +S NTDGIHLQN+++V I  ++
Sbjct: 227 SNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIHLQNTRNVEIQHSN 286

Query: 324 LSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNG 383
           ++CGDDC+SIQTG SNV+IH++NCGPGHGISIG LGKD + ACVS+I V D+ + +T+ G
Sbjct: 287 IACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDIIVEDISIQNTLAG 346

Query: 384 VRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIR 443
           VRIKTWQGG G V+N+ FSNIQ+ +V++PIVIDQ+YCDK+KC NQT AV++SG+ Y  I 
Sbjct: 347 VRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKCKNQTRAVSISGVKYNNIV 406

Query: 444 GTYTVKPVHFACSDNLPCTDVTLTTIELKPL-----QERYHLYDPFCWQTFGELKTPTLP 503
           G++TV+PV  ACS+N+PC DV L  I L+P       + +      CW ++G+ + P +P
Sbjct: 407 GSFTVQPVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQQQQALCWNSYGKTQGPLVP 466

Query: 504 -PIG-CLQ---IGKPSSNRVQYEENDSC 521
             IG CL+   IG   S +V    +  C
Sbjct: 467 SSIGYCLRKSNIGGYYSQKVSRSYDKIC 468

[Close]

BLAST of MS000896 vs. TAIR 10
Match: AT1G48100.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 401.0 bits (1029), Expect = 1.5e-111
Identity = 216/475 (45.47%), Postives = 289/475 (60.84%), Query Frame = 0


Query: 57  NYHSGG---SNPRAAPPHNASPSPSISPKPKEEITPTP-PKKGYNGGDS---AIFNVLDF 116
           +YH G    ++P   PP    P P  +  P +++   P P      GDS    +F+V  F
Sbjct: 30  HYHKGRHGVTHPLPPPP----PPPLETANPPDQVPSDPYPSPDPAPGDSDSGCVFDVTSF 89

Query: 117 GAKGNGETDDTKAFEDAWAAACKVEGSTVMVPAEYVFFVGPISFSGPYCQPDIVFQLDGT 176
           GA G+G  DDT AF+DAW AAC VE   V+ P   VF +    FSGP C+P +VFQLDG 
Sbjct: 90  GAVGDGSCDDTAAFQDAWKAACAVESGVVLAPEGGVFKITSTIFSGP-CKPGLVFQLDGV 149

Query: 177 IIAPTDHQTWGK--GLLQWIQFTKLLGITIRGTGVIDGRGSVWWQDSSFDEPVDDEMKLI 236
           ++ P   + W +     QW+ F +L G T  G G ++G G  WW                
Sbjct: 150 LMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWD--------------- 209

Query: 237 IPIKDPREETKPTPVGSNLVGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCV 296
           +P K  R      P GS+  G  P   PT +RF+ S N+ V G+ IQNSPQ H+KFD C 
Sbjct: 210 LPCKPHR-----GPDGSSSSG--PCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQ 269

Query: 297 GVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCISIQTGCSNVYIHNVNCG 356
           GVL+++I +SSP  S NTDGIHL N++ V I+++ +S GDDCISI TGCS+V I  V CG
Sbjct: 270 GVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCG 329

Query: 357 PGHGISIGSLGKDNTKACVSNITVRDVIMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSE 416
           P HGISIGSLG  N++ACVSNITVR+ ++ D+ NG+R+KTWQGG+GSV N+LF NIQM  
Sbjct: 330 PSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMEN 389

Query: 417 VQLPIVIDQFYCDKAKCSNQTSAVALSGINYEKIRGTYTVK--PVHFACSDNLPCTDVTL 476
           V   I++DQ+YC    C N+TSAV +  + Y  I+GTY V+  P+HFACSD + CT++T+
Sbjct: 390 VLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITM 449

Query: 477 TTIELKPLQERYHLYDPFCWQTFGELKTPTLPPIGCLQIGKPSSNRVQYEENDSC 521
           + +EL P +E   + DPFCW  +G+ +T T+PPI CL  G P      Y+ N  C
Sbjct: 450 SEVELLP-EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSPVVEEA-YDSNYGC 475

The following BLAST results are available for this feature:

BLAST of MS000896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131822.1	1.6e-309	100.00	polygalacturonase At1g48100-like [Momordica charantia]	[more]
XP_023547161.1	1.2e-288	92.88	polygalacturonase At1g48100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961637.1	1.2e-288	92.88	polygalacturonase At1g48100-like [Cucurbita moschata]	[more]
KAG7029199.1	7.7e-288	92.88	Polygalacturonase [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997615.1	2.9e-287	92.31	polygalacturonase At1g48100-like [Cucurbita maxima] >XP_022997616.1 polygalactur...	[more]

BLAST of MS000896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949Z1	2.1e-110	45.47	Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV...	[more]
Q94AJ5	7.7e-81	38.75	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g8017...	[more]
Q7M1E7	1.2e-78	41.82	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
P43212	1.6e-78	41.78	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]
P35336	6.1e-78	41.82	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]

BLAST of MS000896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BS35	7.7e-310	100.00	polygalacturonase At1g48100-like OS=Momordica charantia OX=3673 GN=LOC111004888 ...	[more]
A0A6J1HAQ2	5.8e-289	92.88	polygalacturonase At1g48100-like OS=Cucurbita moschata OX=3662 GN=LOC111462351 P...	[more]
A0A6J1K7Y9	1.4e-287	92.31	polygalacturonase At1g48100-like OS=Cucurbita maxima OX=3661 GN=LOC111492497 PE=...	[more]
A0A0A0LNA5	6.0e-278	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348790 PE=3 SV=1	[more]
A0A6J1GI00	1.1e-276	89.15	polygalacturonase At1g48100-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MS000896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10640.1	1.4e-207	65.42	Pectin lyase-like superfamily protein	[more]
AT1G60590.1	2.1e-206	64.79	Pectin lyase-like superfamily protein	[more]
AT5G14650.1	3.1e-154	61.94	Pectin lyase-like superfamily protein	[more]
AT3G26610.1	1.1e-111	45.31	Pectin lyase-like superfamily protein	[more]
AT1G48100.1	1.5e-111	45.47	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 313..334 e-value: 2000.0 score: 5.0 coord: 336..356 e-value: 4000.0 score: 2.9 coord: 395..416 e-value: 7900.0 score: 0.8 coord: 192..213 e-value: 4000.0 score: 2.9 coord: 263..312 e-value: 180.0 score: 10.9 coord: 366..387 e-value: 6.8 score: 15.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 253..471 e-value: 1.5E-69 score: 234.5 coord: 136..215 e-value: 7.9E-9 score: 35.0
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 343..356
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 93..503 e-value: 2.4E-124 score: 417.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..62
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 6..509
None	No IPR available	PANTHER	PTHR31375:SF192	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 6..509
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 101..509

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000896.1	MS000896.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity