MS000849 (gene) Bitter gourd (TR) v1

Overview


Name	MS000849
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MLP-like protein 328
Location	scaffold650: 11625 .. 11816 (-)
RNA-Seq Expression	MS000849
Synteny	MS000849

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTTGTGGAAAGTTTGTGAGTGAATTAGAGATCAATGCTCCTGTTGGGAAATTCTACCAACTCTTCAAACATCACACTTATCATGTTCCCAATATTTCTCAAAATATTGTCCAAGAAATTGAAGTTCATGAAGCTGATTGGGATAGCCATGGTCATGGATGCATCAAAGTCCTGAAATATACCATC

mRNA sequence

ATGTCTTTTTGTGGAAAGTTTGTGAGTGAATTAGAGATCAATGCTCCTGTTGGGAAATTCTACCAACTCTTCAAACATCACACTTATCATGTTCCCAATATTTCTCAAAATATTGTCCAAGAAATTGAAGTTCATGAAGCTGATTGGGATAGCCATGGTCATGGATGCATCAAAGTCCTGAAATATACCATC

Coding sequence (CDS)

ATGTCTTTTTGTGGAAAGTTTGTGAGTGAATTAGAGATCAATGCTCCTGTTGGGAAATTCTACCAACTCTTCAAACATCACACTTATCATGTTCCCAATATTTCTCAAAATATTGTCCAAGAAATTGAAGTTCATGAAGCTGATTGGGATAGCCATGGTCATGGATGCATCAAAGTCCTGAAATATACCATC

Protein sequence

MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVLKYTI

Homology

[Close]

BLAST of MS000849 vs. NCBI nr
Match: XP_022150052.1 (MLP-like protein 328 [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 4.5e-20
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS CGKFVSELEINAP  K+Y++FK   +HVPNIS NI+Q+I+VHE DWDSHGHG IK+ 
Sbjct: 1  MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQIQVHEGDWDSHGHGSIKIW 60

Query: 61 KYTI 65
           YTI
Sbjct: 61 NYTI 64

[Close]

BLAST of MS000849 vs. NCBI nr
Match: XP_022155165.1 (MLP-like protein 328 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 5.8e-20
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS CGKFVSELEINAP  K+Y++FK   +HVPNIS NI+Q++EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQVEVHEGDWDNHGHGSIKIW 60

Query: 61 KYTI 65
           YTI
Sbjct: 61 NYTI 64

[Close]

BLAST of MS000849 vs. NCBI nr
Match: XP_008450254.1 (PREDICTED: MLP-like protein 328 [Cucumis melo] >KAA0061218.1 MLP-like protein 328 [Cucumis melo var. makuwa] >TYK06266.1 MLP-like protein 328 [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GKFVSELEINAP  K+Y++FK    HVPNIS NI+Q +EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLVGKFVSELEINAPAEKYYKIFKDQVSHVPNISPNIIQNVEVHEGDWDTHGHGSIKIW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 SYTV 64

[Close]

BLAST of MS000849 vs. NCBI nr
Match: XP_004142280.1 (MLP-like protein 328 [Cucumis sativus] >KGN49640.1 hypothetical protein Csa_018401 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 7.1e-18
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GKFVSELEINAP  K+Y++FK    HVPNIS NI+Q +EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLVGKFVSELEINAPAEKYYKIFKDQVSHVPNISPNIIQNVEVHEGDWDTHGHGSIKIW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 SYTV 64

[Close]

BLAST of MS000849 vs. NCBI nr
Match: XP_022155179.1 (MLP-like protein 328 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 3.5e-17
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GK VSELEINA   KFY++FK   +HVPNIS N VQ++EVHE DWD+HGHG IK  
Sbjct: 1  MSLVGKLVSELEINAAAEKFYKVFKDQAFHVPNISPNFVQQVEVHEGDWDNHGHGSIKTW 60

Query: 61 KYTI 65
          KYT+
Sbjct: 61 KYTV 64

[Close]

BLAST of MS000849 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.9e-05
Identity = 20/52 (38.46%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 2  SFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHG 54
          S CGK  +++EI A  GKF+ +F    +HV   +   +Q  E+HE DW   G
Sbjct: 19 SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVG 70

[Close]

BLAST of MS000849 vs. ExPASy TrEMBL
Match: A0A6J1D9N8 (MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111018321 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-20
Identity = 45/64 (70.31%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS CGKFVSELEINAP  K+Y++FK   +HVPNIS NI+Q+I+VHE DWDSHGHG IK+ 
Sbjct: 1  MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQIQVHEGDWDSHGHGSIKIW 60

Query: 61 KYTI 65
           YTI
Sbjct: 61 NYTI 64

[Close]

BLAST of MS000849 vs. ExPASy TrEMBL
Match: A0A6J1DLN5 (MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111022307 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-20
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS CGKFVSELEINAP  K+Y++FK   +HVPNIS NI+Q++EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQVEVHEGDWDNHGHGSIKIW 60

Query: 61 KYTI 65
           YTI
Sbjct: 61 NYTI 64

[Close]

BLAST of MS000849 vs. ExPASy TrEMBL
Match: A0A5A7V0Y8 (MLP-like protein 328 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00460 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GKFVSELEINAP  K+Y++FK    HVPNIS NI+Q +EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLVGKFVSELEINAPAEKYYKIFKDQVSHVPNISPNIIQNVEVHEGDWDTHGHGSIKIW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 SYTV 64

[Close]

BLAST of MS000849 vs. ExPASy TrEMBL
Match: A0A0A0KIU4 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G037656 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GKFVSELEINAP  K+Y++FK    HVPNIS NI+Q +EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLVGKFVSELEINAPAEKYYKIFKDQVSHVPNISPNIIQNVEVHEGDWDTHGHGSIKIW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 SYTV 64

[Close]

BLAST of MS000849 vs. ExPASy TrEMBL
Match: A0A1S3BPT7 (MLP-like protein 328 OS=Cucumis melo OX=3656 GN=LOC103491915 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          MS  GKFVSELEINAP  K+Y++FK    HVPNIS NI+Q +EVHE DWD+HGHG IK+ 
Sbjct: 1  MSLVGKFVSELEINAPAEKYYKIFKDQVSHVPNISPNIIQNVEVHEGDWDTHGHGSIKIW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 SYTV 64

[Close]

BLAST of MS000849 vs. TAIR 10
Match: AT1G30990.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 7.1e-08
Identity = 21/64 (32.81%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          M+  G +++++ +N    K Y+L+   T+ +P+   +++Q + +HE DWDS  HG IK  
Sbjct: 1  MAMSGTYMTDVPLNGSAEKHYKLWSSETHRIPDTIGHLIQGVILHEGDWDS--HGSIKTW 60

Query: 61 KYTI 65
          KY +
Sbjct: 61 KYNL 62

[Close]

BLAST of MS000849 vs. TAIR 10
Match: AT1G70840.1 (MLP-like protein 31 )

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-06
Identity = 20/52 (38.46%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 2  SFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHG 54
          S CGK  +++EI A  GKF+ +F    +HV   +   +Q  E+HE DW   G
Sbjct: 19 SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVG 70

[Close]

BLAST of MS000849 vs. TAIR 10
Match: AT1G14960.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.8e-06
Identity = 20/63 (31.75%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          M+  G +V+++ +     K Y+ ++   + VP    +++Q + VH+ DWDS  HG IK+ 
Sbjct: 1  MAMSGTYVTDVPLKGSAEKHYKRWRSENHLVPEAIGHLIQGVTVHDGDWDS--HGTIKIW 60

Query: 61 KYT 64
           YT
Sbjct: 61 NYT 61

[Close]

BLAST of MS000849 vs. TAIR 10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 8.7e-06
Identity = 22/64 (34.38%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          M+  GK+V+E+ +     K Y+ ++      P+   + VQ + VH+ DWDS  HG IK  
Sbjct: 1  MAMSGKYVAEVPLKGSAEKHYRRWRSQNNLFPDAIGHHVQGVTVHDGDWDS--HGSIKSW 60

Query: 61 KYTI 65
           YT+
Sbjct: 61 NYTL 62

[Close]

BLAST of MS000849 vs. TAIR 10
Match: AT1G14950.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 7.4e-05
Identity = 21/63 (33.33%), Postives = 32/63 (50.79%), Query Frame = 0


Query: 1  MSFCGKFVSELEINAPVGKFYQLFKHHTYHVPNISQNIVQEIEVHEADWDSHGHGCIKVL 60
          M+  G +V+E+ +       Y+ +K      P+   + +Q + VHE DWDS  HG IK  
Sbjct: 1  MATSGTYVTEVPLKGSAKNHYKRWKSENQLFPDAIGHHIQGVTVHEGDWDS--HGAIKSW 60

Query: 61 KYT 64
           YT
Sbjct: 61 NYT 61

The following BLAST results are available for this feature:

BLAST of MS000849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150052.1	4.5e-20	70.31	MLP-like protein 328 [Momordica charantia]	[more]
XP_022155165.1	5.8e-20	68.75	MLP-like protein 328 [Momordica charantia]	[more]
XP_008450254.1	7.1e-18	65.63	PREDICTED: MLP-like protein 328 [Cucumis melo] >KAA0061218.1 MLP-like protein 32...	[more]
XP_004142280.1	7.1e-18	65.63	MLP-like protein 328 [Cucumis sativus] >KGN49640.1 hypothetical protein Csa_0184...	[more]
XP_022155179.1	3.5e-17	65.63	MLP-like protein 328 [Momordica charantia]	[more]

BLAST of MS000849 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941R6	1.9e-05	38.46	MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2	[more]

BLAST of MS000849 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9N8	2.2e-20	70.31	MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111018321 PE=3 SV=1	[more]
A0A6J1DLN5	2.8e-20	68.75	MLP-like protein 328 OS=Momordica charantia OX=3673 GN=LOC111022307 PE=3 SV=1	[more]
A0A5A7V0Y8	3.5e-18	65.63	MLP-like protein 328 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157...	[more]
A0A0A0KIU4	3.5e-18	65.63	Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G037656 PE=...	[more]
A0A1S3BPT7	3.5e-18	65.63	MLP-like protein 328 OS=Cucumis melo OX=3656 GN=LOC103491915 PE=3 SV=1	[more]

BLAST of MS000849 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30990.1	7.1e-08	32.81	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70840.1	1.3e-06	38.46	MLP-like protein 31	[more]
AT1G14960.1	1.8e-06	31.75	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G14930.1	8.7e-06	34.38	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G14950.1	7.4e-05	33.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..64 e-value: 1.7E-13 score: 52.8
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 4..64 e-value: 3.1E-12 score: 46.6
None	No IPR available	PANTHER	PTHR31338	POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN	coord: 1..64
None	No IPR available	PANTHER	PTHR31338:SF20	BNAA01G13350D PROTEIN	coord: 1..64
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000849.1	MS000849.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response