Homology
BLAST of MS000664 vs. NCBI nr
Match:
XP_022145183.1 (protein SHORT-ROOT-like, partial [Momordica charantia])
HSP 1 Score: 773.5 bits (1996), Expect = 1.0e-219
Identity = 390/393 (99.24%), Postives = 390/393 (99.24%), Query Frame = 0
Query: 50 SPSAAAAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 109
SPSAA AAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL
Sbjct: 1 SPSAAGAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 60
Query: 110 FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE 169
FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 61 FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE 120
Query: 170 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR 229
TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR
Sbjct: 121 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR 180
Query: 230 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN 289
LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN
Sbjct: 181 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN 240
Query: 290 PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 349
PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI
Sbjct: 241 PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 300
Query: 350 VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS 409
VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS
Sbjct: 301 VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS 360
Query: 410 DRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
DRPAEEEEDAESRVG YL WKEESVVWVSAWKP
Sbjct: 361 DRPAEEEEDAESRVGAYLTWKEESVVWVSAWKP 393
BLAST of MS000664 vs. NCBI nr
Match:
XP_038906992.1 (protein SHORT-ROOT-like [Benincasa hispida])
HSP 1 Score: 728.0 bits (1878), Expect = 4.8e-206
Identity = 379/453 (83.66%), Postives = 403/453 (88.96%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSA---AAAA 60
MDITFFTAKEAPTSFF+QSHD + + SN +STS SSE+SP+ SPSA AAA
Sbjct: 1 MDITFFTAKEAPTSFFNQSHDHHLH-HLHFSNLDMQSSTSHSSEYSPEHSPSAAATAAAT 60
Query: 61 GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETG 120
GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFCRATETG
Sbjct: 61 GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCRATETG 120
Query: 121 QSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDI 180
+CYKTLVAVAEKNH+FDSA RLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDI
Sbjct: 121 LTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDI 180
Query: 181 SNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMGVPFEF 240
SNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK +MKEIGQRMEKFARLMGVPFEF
Sbjct: 181 SNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARLMGVPFEF 240
Query: 241 NPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRVLTIVE 300
NPITNLNHLT+LT EALKVEE EAIAINCIGALRRVR+EERNNVI+M KSL PRVLTIVE
Sbjct: 241 NPITNLNHLTDLTNEALKVEEGEAIAINCIGALRRVRVEERNNVISMLKSLKPRVLTIVE 300
Query: 301 EEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDE 360
EEADFISSKNDF KCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCD
Sbjct: 301 EEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDH 360
Query: 361 ---SEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPA- 420
SE EMGSERRE+G+QW+KRLK+A FSSA FS+DVMDDVKALLKRY+ GWA+ A
Sbjct: 361 DQISEEEMGSERREKGKQWTKRLKQALFSSADFSEDVMDDVKALLKRYKPGWALLRSTAA 420
Query: 421 ----EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
E+E + G+YL WKEESVVWVSAWKP
Sbjct: 421 VTGDEDESGGDDSSGIYLTWKEESVVWVSAWKP 452
BLAST of MS000664 vs. NCBI nr
Match:
XP_022992254.1 (protein SHORT-ROOT-like [Cucurbita maxima])
HSP 1 Score: 718.8 bits (1854), Expect = 2.9e-203
Identity = 372/457 (81.40%), Postives = 404/457 (88.40%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAA--- 60
MDITFFTAKEAPT+FF+QSHD + SN +STS SSE+SP++SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTTFFNQSHD--HHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAAA 60
Query: 61 -----GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCR 120
GKW+STLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFC+
Sbjct: 61 TLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCK 120
Query: 121 ATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKL 180
ATETG +CYKTLVA+A+KNHSFDS+ +LILKFQEASPWTTFGHVASNGAILEALEGETKL
Sbjct: 121 ATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGETKL 180
Query: 181 HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMG 240
HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVK +MKEIGQRMEKFARLMG
Sbjct: 181 HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMG 240
Query: 241 VPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRV 300
VPFEFNPITNL +LT+LTKEALKVEEDEAIAINCIGALRRVRIEERNNVI+M KSL PRV
Sbjct: 241 VPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKPRV 300
Query: 301 LTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRL 360
LTIVEEEADFISSKN+F KCFEECLRFYTLYF+MLE+SFV TSNERLVLERECSRSIVRL
Sbjct: 301 LTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVRL 360
Query: 361 LGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRP 420
LGCDESE +MGSERRE+G+QWSKRLKE+AFS A FS+DV+DDVKALLKRY+ GWA+ R
Sbjct: 361 LGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRA 420
Query: 421 A-------EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
A E E + GVYL WKEE VVWVSAWKP
Sbjct: 421 ATTATATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 455
BLAST of MS000664 vs. NCBI nr
Match:
KAG7013919.1 (Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 718.4 bits (1853), Expect = 3.8e-203
Identity = 372/458 (81.22%), Postives = 403/458 (87.99%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAA--- 60
MDITFFTAKEAPT+FF+QSHD + SN +STS SSE+SP++SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTTFFNQSHD--HHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAAA 60
Query: 61 --------GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 120
GKW+STLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQAL
Sbjct: 61 AAATLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120
Query: 121 FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE 180
FC+ATETG +CYKTLVA+A+KNHSFDS+ +LILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 121 FCKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180
Query: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR 240
TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVK +MKEIGQRMEKFAR
Sbjct: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240
Query: 241 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN 300
LMGVPFEFNPITNL +LT+LTKEALKVEEDEAIAINCIGALRRVRIEERNNV++M KSL
Sbjct: 241 LMGVPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLKSLK 300
Query: 301 PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 360
PRVLTIVEEEADFISSKN+F KCFEECLRFYTLYF+MLEESFV TSNERLVLERECSRSI
Sbjct: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECSRSI 360
Query: 361 VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS 420
VRLLGCDESE +MGSERRE+G+QWSKRLKE+AFS A FS+DV+DDVKALLKRY+ GWA+
Sbjct: 361 VRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420
Query: 421 DRPA-----EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
R A E E GVYL WKEE VVWVSAWKP
Sbjct: 421 RRAATTATGEVHERDNDSCGVYLTWKEEPVVWVSAWKP 456
BLAST of MS000664 vs. NCBI nr
Match:
XP_022933337.1 (protein SHORT-ROOT-like [Cucurbita moschata] >XP_022953296.1 protein SHORT-ROOT-like [Cucurbita moschata])
HSP 1 Score: 718.0 bits (1852), Expect = 5.0e-203
Identity = 370/454 (81.50%), Postives = 404/454 (88.99%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAA--- 60
MDITFFTAKEAPT+FF+QSHD + SN +STS SSE+SP++SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTTFFNQSHD--HHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAAT 60
Query: 61 ----GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRA 120
GKW+STLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFC+A
Sbjct: 61 LAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKA 120
Query: 121 TETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLH 180
TETG +CYKTLVA+A+KNHSFDS+ +LILKFQEASPWTTFGHVASNGAILEALEGETKLH
Sbjct: 121 TETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGETKLH 180
Query: 181 IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMGV 240
IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVK +MKEIGQRMEKFARLMGV
Sbjct: 181 IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMGV 240
Query: 241 PFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRVL 300
PFEFNPITNL +LT+LTKEALKVEEDEAIAINCIGALRRVRIEERNNV++M KSL PRVL
Sbjct: 241 PFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLKSLKPRVL 300
Query: 301 TIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLL 360
TIVEEEADFISSKN+F KCFEECLRFYTLYF+MLEESFV TSNERLVLERECSRSIVRLL
Sbjct: 301 TIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECSRSIVRLL 360
Query: 361 GCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPA 420
GCDESE +MGSE+RE+G+QWSKRLKE+AFS A FS+DV+DDVKALLKRY+ GWA+ R A
Sbjct: 361 GCDESEEQMGSEKREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRAA 420
Query: 421 -----EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+ E + GVYL WKEE VVWVSAWKP
Sbjct: 421 TTATGKVHERDDDSCGVYLTWKEEPVVWVSAWKP 452
BLAST of MS000664 vs. ExPASy Swiss-Prot
Match:
Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)
HSP 1 Score: 410.2 bits (1053), Expect = 2.9e-113
Identity = 220/461 (47.72%), Postives = 310/461 (67.25%), Query Frame = 0
Query: 4 TFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTST---SQSSEFSPDRSPSA--AAAAG 63
T+++ PT + + P S ++ ++S+ + S FS ++P + +A
Sbjct: 81 TYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAFSIPQTPPSFDFSANA 140
Query: 64 KWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQ 123
KWA ++L E A+A S+KD+ + LW LNEL+SPYGD++QKLASYFLQALF R T +G+
Sbjct: 141 KWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGE 200
Query: 124 SCYKTLV--AVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIID 183
CY+T+V A EK SF+S R+ +LKFQE SPW TFGHVA+NGAILEA++GE K+HI+D
Sbjct: 201 RCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVD 260
Query: 184 ISNTLCTQWPTLLESLATRNDDTPHLKLTVVITT-------TIVKPVMKEIGQRMEKFAR 243
IS+T CTQWPTLLE+LATR+DDTPHL+LT V+ T +MKEIG RMEKFAR
Sbjct: 261 ISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFAR 320
Query: 244 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRV--RIEERNNVITMFKS 303
LMGVPF+FN I ++ L+E L V+ DE +AINC+GA+ + R R+ VI+ F+
Sbjct: 321 LMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRR 380
Query: 304 LNPRVLTIVEEEADFISSK-----NDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLE 363
L PR++T+VEEEAD + + ++F + F ECLR++ + FE EESF TSNERL+LE
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 364 RECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRY 423
R R+IV L+ C+ S+ +ERRE R+WS+R++ + F + G+SD+V DDV+ALL+RY
Sbjct: 441 RAAGRAIVDLVACEPSD---STERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRY 500
Query: 424 RSG-WAVSDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+ G W++ P G++L W+++ VVW SAW+P
Sbjct: 501 KEGVWSMVQCP--------DAAGIFLCWRDQPVVWASAWRP 530
BLAST of MS000664 vs. ExPASy Swiss-Prot
Match:
A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)
HSP 1 Score: 387.1 bits (993), Expect = 2.6e-106
Identity = 218/461 (47.29%), Postives = 292/461 (63.34%), Query Frame = 0
Query: 20 HDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAA---AAAGKWASTLLKECAKAISEKD 79
H L + D+ L+ +S +S + S A G+WAS LL ECA++++ +D
Sbjct: 148 HGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVAARD 207
Query: 80 SNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDS 139
S ++ +WMLNELASPYGD +QKLASYFLQ LF R T +GQ +TL A +++N SFDS
Sbjct: 208 SQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDS 267
Query: 140 ARRLILKFQEASPWTTFGHVASNGAILE-------ALEGET-KLHIIDISNTLCTQWPTL 199
RR L+FQE SPW++FGHVA+NGAILE A ET + HI+D+SNT CTQWPTL
Sbjct: 268 TRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTL 327
Query: 200 LESLATRN-DDTPHLKLTVVIT------TTIVKPVMKEIGQRMEKFARLMGVPFEFNPIT 259
LE+LATR+ D+TPHL +T V++ T V+ VM+EIGQRMEKFARLMGVPF F +
Sbjct: 328 LEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVH 387
Query: 260 NLNHLTELTKEALKVEE---DEAIAINCIGALRRV---RIEERNNVITMFKSLNPRVLTI 319
+ L EL +AL + E A+A+NC+ +LR V R R+ + L+PRV+T+
Sbjct: 388 HSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTV 447
Query: 320 VEEEADFISSKND--------------FQKCFEECLRFYTLYFEMLEESFVATSNERLVL 379
VEEEAD ++S D F K F E LRF++ Y + LEESF TSNERL L
Sbjct: 448 VEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLAL 507
Query: 380 ERECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKR 439
ER R+IV L+ C SE ERRE W++R++ A FS FS+DV DDV++LL+R
Sbjct: 508 ERGAGRAIVDLVSCPASE---SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRR 567
Query: 440 YRSGWAVSDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
YR GW++ + +D+ + GV+L WKE+ +VW SAW+P
Sbjct: 568 YREGWSMREAGT---DDSAAGAGVFLAWKEQPLVWASAWRP 602
BLAST of MS000664 vs. ExPASy Swiss-Prot
Match:
A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)
HSP 1 Score: 386.7 bits (992), Expect = 3.5e-106
Identity = 211/429 (49.18%), Postives = 278/429 (64.80%), Query Frame = 0
Query: 52 SAAAAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFC 111
+A +++G+WA+ LL ECA+A++ +DS ++ +WMLNELASPYGD DQKLASYFLQ LF
Sbjct: 179 AAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFA 238
Query: 112 RATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEA-LEG-- 171
R T +G +TL +++N SFDS RR LKFQE SPWT FGHVA+NGAILE+ LE
Sbjct: 239 RLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAA 298
Query: 172 ----------------ETKLHIIDISNTLCTQWPTLLESLATR-NDDTPHLKLTVVITT- 231
T+LHI+D+SNT CTQWPTLLE+LATR +DDTPHL +T V+ T
Sbjct: 299 AGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTA 358
Query: 232 ---TIVKPVMKEIGQRMEKFARLMGVPFEFNPITNLNHLTELTKEALKVEE---DEAIAI 291
+ VM+EIGQR+EKFARLMGVPF F + + L +L AL + E A+A+
Sbjct: 359 APSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAV 418
Query: 292 NCIGALRRVRIEERNNVITMFKSLNPRVLTIVEEEADFISSKND----------FQKCFE 351
NC+ ALR V R+ + + L PRV+T+VEEEAD + + D F K F
Sbjct: 419 NCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFG 478
Query: 352 ECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEGEMGSERRERGRQWS 411
E LRF++ Y + LEESF TSNERL LER R+IV L+ C S+ +ERRE W+
Sbjct: 479 EGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SAERRETAASWA 538
Query: 412 KRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDR-PAEEEEDAESRVGVYLKWKEES 443
+R++ A FS A FS+DV DDV++LL+RY+ GW++ D A ++ + G +L WKE+
Sbjct: 539 RRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQP 598
BLAST of MS000664 vs. ExPASy Swiss-Prot
Match:
Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)
HSP 1 Score: 386.3 bits (991), Expect = 4.5e-106
Identity = 211/429 (49.18%), Postives = 278/429 (64.80%), Query Frame = 0
Query: 52 SAAAAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFC 111
+A +++G+WA+ LL ECA+A++ +DS ++ +WMLNELASPYGD DQKLASYFLQ LF
Sbjct: 179 AAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFA 238
Query: 112 RATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEA-LEG-- 171
R T +G +TL +++N SFDS RR LKFQE SPWT FGHVA+NGAILE+ LE
Sbjct: 239 RLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAA 298
Query: 172 ----------------ETKLHIIDISNTLCTQWPTLLESLATR-NDDTPHLKLTVVITT- 231
T+LHI+D+SNT CTQWPTLLE+LATR +DDTPHL +T V+ T
Sbjct: 299 AGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTA 358
Query: 232 ---TIVKPVMKEIGQRMEKFARLMGVPFEFNPITNLNHLTELTKEALKVEE---DEAIAI 291
+ VM+EIGQR+EKFARLMGVPF F + + L +L AL + E A+A+
Sbjct: 359 APSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAV 418
Query: 292 NCIGALRRVRIEERNNVITMFKSLNPRVLTIVEEEADFISSKND----------FQKCFE 351
NC+ ALR V R+ + + L PRV+T+VEEEAD + + D F K F
Sbjct: 419 NCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFG 478
Query: 352 ECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEGEMGSERRERGRQWS 411
E LRF++ Y + LEESF TSNERL LER R+IV L+ C S+ +ERRE W+
Sbjct: 479 EGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SAERRETAASWA 538
Query: 412 KRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDR-PAEEEEDAESRVGVYLKWKEES 443
+R++ A FS A FS+DV DDV++LL+RY+ GW++ D A ++ + G +L WKE+
Sbjct: 539 RRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQP 598
BLAST of MS000664 vs. ExPASy Swiss-Prot
Match:
Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)
HSP 1 Score: 384.8 bits (987), Expect = 1.3e-105
Identity = 217/461 (47.07%), Postives = 291/461 (63.12%), Query Frame = 0
Query: 20 HDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAA---AAAGKWASTLLKECAKAISEKD 79
H L + D+ L+ +S +S + S A G+WAS LL ECA++++ +D
Sbjct: 148 HGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGGGRWASQLLLECARSVAARD 207
Query: 80 SNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDS 139
S ++ +WMLNELASPYGD +QKLASYFLQ LF R T +G +TL A +++N SFDS
Sbjct: 208 SQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDS 267
Query: 140 ARRLILKFQEASPWTTFGHVASNGAILE-------ALEGET-KLHIIDISNTLCTQWPTL 199
RR L+FQE SPW++FGHVA+NGAILE A ET + HI+D+SNT CTQWPTL
Sbjct: 268 TRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTL 327
Query: 200 LESLATRN-DDTPHLKLTVVIT------TTIVKPVMKEIGQRMEKFARLMGVPFEFNPIT 259
LE+LATR+ D+TPHL +T V++ T V+ VM+EIGQRMEKFARLMGVPF F +
Sbjct: 328 LEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVH 387
Query: 260 NLNHLTELTKEALKVEE---DEAIAINCIGALRRV---RIEERNNVITMFKSLNPRVLTI 319
+ L EL +AL + E A+A+NC+ +LR V R R+ + L+PRV+T+
Sbjct: 388 HSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTV 447
Query: 320 VEEEADFISSKND--------------FQKCFEECLRFYTLYFEMLEESFVATSNERLVL 379
VEEEAD ++S D F K F E LRF++ Y + LEESF TSNERL L
Sbjct: 448 VEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLAL 507
Query: 380 ERECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKR 439
ER R+IV L+ C SE ERRE W++R++ A FS FS+DV DDV++LL+R
Sbjct: 508 ERGAGRAIVDLVSCPASE---SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRR 567
Query: 440 YRSGWAVSDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
YR GW++ + +D+ + GV+L WKE+ +VW SAW+P
Sbjct: 568 YREGWSMREAGT---DDSAAGAGVFLAWKEQPLVWASAWRP 602
BLAST of MS000664 vs. ExPASy TrEMBL
Match:
A0A6J1CVA0 (protein SHORT-ROOT-like OS=Momordica charantia OX=3673 GN=LOC111014689 PE=3 SV=1)
HSP 1 Score: 773.5 bits (1996), Expect = 4.8e-220
Identity = 390/393 (99.24%), Postives = 390/393 (99.24%), Query Frame = 0
Query: 50 SPSAAAAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 109
SPSAA AAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL
Sbjct: 1 SPSAAGAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 60
Query: 110 FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE 169
FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 61 FCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGE 120
Query: 170 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR 229
TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR
Sbjct: 121 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFAR 180
Query: 230 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN 289
LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN
Sbjct: 181 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLN 240
Query: 290 PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 349
PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI
Sbjct: 241 PRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 300
Query: 350 VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS 409
VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS
Sbjct: 301 VRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVS 360
Query: 410 DRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
DRPAEEEEDAESRVG YL WKEESVVWVSAWKP
Sbjct: 361 DRPAEEEEDAESRVGAYLTWKEESVVWVSAWKP 393
BLAST of MS000664 vs. ExPASy TrEMBL
Match:
A0A6J1JX21 (protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111488628 PE=3 SV=1)
HSP 1 Score: 718.8 bits (1854), Expect = 1.4e-203
Identity = 372/457 (81.40%), Postives = 404/457 (88.40%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAA--- 60
MDITFFTAKEAPT+FF+QSHD + SN +STS SSE+SP++SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTTFFNQSHD--HHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAAA 60
Query: 61 -----GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCR 120
GKW+STLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFC+
Sbjct: 61 TLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCK 120
Query: 121 ATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKL 180
ATETG +CYKTLVA+A+KNHSFDS+ +LILKFQEASPWTTFGHVASNGAILEALEGETKL
Sbjct: 121 ATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGETKL 180
Query: 181 HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMG 240
HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVK +MKEIGQRMEKFARLMG
Sbjct: 181 HIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMG 240
Query: 241 VPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRV 300
VPFEFNPITNL +LT+LTKEALKVEEDEAIAINCIGALRRVRIEERNNVI+M KSL PRV
Sbjct: 241 VPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLKPRV 300
Query: 301 LTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRL 360
LTIVEEEADFISSKN+F KCFEECLRFYTLYF+MLE+SFV TSNERLVLERECSRSIVRL
Sbjct: 301 LTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSIVRL 360
Query: 361 LGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRP 420
LGCDESE +MGSERRE+G+QWSKRLKE+AFS A FS+DV+DDVKALLKRY+ GWA+ R
Sbjct: 361 LGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRA 420
Query: 421 A-------EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
A E E + GVYL WKEE VVWVSAWKP
Sbjct: 421 ATTATATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 455
BLAST of MS000664 vs. ExPASy TrEMBL
Match:
A0A6J1EZH2 (protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111440607 PE=3 SV=1)
HSP 1 Score: 718.0 bits (1852), Expect = 2.4e-203
Identity = 370/454 (81.50%), Postives = 404/454 (88.99%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAA--- 60
MDITFFTAKEAPT+FF+QSHD + SN +STS SSE+SP++SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTTFFNQSHD--HHHHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAAAAT 60
Query: 61 ----GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRA 120
GKW+STLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFC+A
Sbjct: 61 LAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCKA 120
Query: 121 TETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLH 180
TETG +CYKTLVA+A+KNHSFDS+ +LILKFQEASPWTTFGHVASNGAILEALEGETKLH
Sbjct: 121 TETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGETKLH 180
Query: 181 IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMGV 240
IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVK +MKEIGQRMEKFARLMGV
Sbjct: 181 IIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARLMGV 240
Query: 241 PFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPRVL 300
PFEFNPITNL +LT+LTKEALKVEEDEAIAINCIGALRRVRIEERNNV++M KSL PRVL
Sbjct: 241 PFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLKSLKPRVL 300
Query: 301 TIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLL 360
TIVEEEADFISSKN+F KCFEECLRFYTLYF+MLEESFV TSNERLVLERECSRSIVRLL
Sbjct: 301 TIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECSRSIVRLL 360
Query: 361 GCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPA 420
GCDESE +MGSE+RE+G+QWSKRLKE+AFS A FS+DV+DDVKALLKRY+ GWA+ R A
Sbjct: 361 GCDESEEQMGSEKREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLRRAA 420
Query: 421 -----EEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+ E + GVYL WKEE VVWVSAWKP
Sbjct: 421 TTATGKVHERDDDSCGVYLTWKEEPVVWVSAWKP 452
BLAST of MS000664 vs. ExPASy TrEMBL
Match:
A0A0A0K966 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G081510 PE=3 SV=1)
HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 376/460 (81.74%), Postives = 403/460 (87.61%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHDLPISIDMQS---SNQLSHTSTSQSSEFSPDRSPSAAAAA 60
MDITFFTAKEAPTSFF+QSHD + SN +STS SSE+SP+ SPSAAAAA
Sbjct: 1 MDITFFTAKEAPTSFFNQSHDHRHHHQLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAAA 60
Query: 61 ------GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFC 120
GKWASTLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+A YFLQALFC
Sbjct: 61 ATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQALFC 120
Query: 121 RATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETK 180
RATETG +CYKTLVAVAEKNH+FDSA RLILKFQEASPWTTFGHVASNGAILEALEGETK
Sbjct: 121 RATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETK 180
Query: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLM 240
LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK +MKEIGQRMEKFARLM
Sbjct: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARLM 240
Query: 241 GVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVITMFKSLNPR 300
GVPFEFNPITN++HLT+LT EALKVEE EAIAINCIGALRRV++EERNNVI+M KSL PR
Sbjct: 241 GVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLKPR 300
Query: 301 VLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360
VLTIVEEEADFISSKNDF KCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR
Sbjct: 301 VLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360
Query: 361 LLGCDE---SEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAV 420
LLGCD SE E+GSERRE+G+QW+KRLK+A FSSA FS+DVMDDVKALLKRY+ GWA+
Sbjct: 361 LLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWAL 420
Query: 421 ------SDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+ R EE D ES G+YL WKEE VVWVSAWKP
Sbjct: 421 LRPATAAVRDEEENGDGESS-GIYLTWKEEPVVWVSAWKP 459
BLAST of MS000664 vs. ExPASy TrEMBL
Match:
A0A1S3CCT8 (protein SHORT-ROOT-like OS=Cucumis melo OX=3656 GN=LOC103498966 PE=3 SV=1)
HSP 1 Score: 712.2 bits (1837), Expect = 1.3e-201
Identity = 379/469 (80.81%), Postives = 406/469 (86.57%), Query Frame = 0
Query: 1 MDITFFTAKEAPTSFFHQSHD----------LPIS-IDMQSSNQLSHTSTSQSSEFSPDR 60
MDITFFT KEAPTSFF+QSHD L S +DMQS STS SSE+SP+
Sbjct: 1 MDITFFTPKEAPTSFFNQSHDHRHHHHHHHHLHFSNLDMQS-------STSHSSEYSPEH 60
Query: 61 SPSAAAAA------GKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLAS 120
SPSAAAAA GKWASTLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+AS
Sbjct: 61 SPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAS 120
Query: 121 YFLQALFCRATETGQSCYKTLVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAIL 180
YFLQALFCRATETG +CYKTLVAVAEKNH+FDSA RLILKFQEASPWTTFGHVASNGAIL
Sbjct: 121 YFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAIL 180
Query: 181 EALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQR 240
EALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK +MKEIGQR
Sbjct: 181 EALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQR 240
Query: 241 MEKFARLMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRVRIEERNNVIT 300
MEKFARLMGVPFEFNPITN+NHLT+LT EALKVEE EAIAINCIGALRRV++EERNNVI+
Sbjct: 241 MEKFARLMGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVIS 300
Query: 301 MFKSLNPRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLER 360
M K L PRVLTIVEEEADFISS NDF KCFEECLRFYTLYFEMLEESF ATSNERLVLER
Sbjct: 301 MLKLLKPRVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLEESFGATSNERLVLER 360
Query: 361 ECSRSIVRLLGCDE---SEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLK 420
ECSRSIVRLLGCD SE EMGSERRE+G+QW+KRLK+A FSSA FS+DVMDDVKALLK
Sbjct: 361 ECSRSIVRLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLK 420
Query: 421 RYRSGWAVSDRPA------EEEEDAESR-VGVYLKWKEESVVWVSAWKP 443
RY+ GWA+ RPA +EEE+ ++ G+YL WKEE VVWVSAWKP
Sbjct: 421 RYKPGWALL-RPATAAVGVDEEENGDAEPSGIYLTWKEEPVVWVSAWKP 461
BLAST of MS000664 vs. TAIR 10
Match:
AT4G37650.1 (GRAS family transcription factor )
HSP 1 Score: 410.2 bits (1053), Expect = 2.1e-114
Identity = 220/461 (47.72%), Postives = 310/461 (67.25%), Query Frame = 0
Query: 4 TFFTAKEAPTSFFHQSHDLPISIDMQSSNQLSHTST---SQSSEFSPDRSPSA--AAAAG 63
T+++ PT + + P S ++ ++S+ + S FS ++P + +A
Sbjct: 81 TYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHNDPSAFSIPQTPPSFDFSANA 140
Query: 64 KWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQ 123
KWA ++L E A+A S+KD+ + LW LNEL+SPYGD++QKLASYFLQALF R T +G+
Sbjct: 141 KWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGE 200
Query: 124 SCYKTLV--AVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIID 183
CY+T+V A EK SF+S R+ +LKFQE SPW TFGHVA+NGAILEA++GE K+HI+D
Sbjct: 201 RCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVD 260
Query: 184 ISNTLCTQWPTLLESLATRNDDTPHLKLTVVITT-------TIVKPVMKEIGQRMEKFAR 243
IS+T CTQWPTLLE+LATR+DDTPHL+LT V+ T +MKEIG RMEKFAR
Sbjct: 261 ISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFAR 320
Query: 244 LMGVPFEFNPITNLNHLTELTKEALKVEEDEAIAINCIGALRRV--RIEERNNVITMFKS 303
LMGVPF+FN I ++ L+E L V+ DE +AINC+GA+ + R R+ VI+ F+
Sbjct: 321 LMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRR 380
Query: 304 LNPRVLTIVEEEADFISSK-----NDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLE 363
L PR++T+VEEEAD + + ++F + F ECLR++ + FE EESF TSNERL+LE
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 364 RECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRY 423
R R+IV L+ C+ S+ +ERRE R+WS+R++ + F + G+SD+V DDV+ALL+RY
Sbjct: 441 RAAGRAIVDLVACEPSD---STERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRY 500
Query: 424 RSG-WAVSDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+ G W++ P G++L W+++ VVW SAW+P
Sbjct: 501 KEGVWSMVQCP--------DAAGIFLCWRDQPVVWASAWRP 530
BLAST of MS000664 vs. TAIR 10
Match:
AT3G49950.1 (GRAS family transcription factor )
HSP 1 Score: 184.9 bits (468), Expect = 1.4e-46
Identity = 134/416 (32.21%), Postives = 213/416 (51.20%), Query Frame = 0
Query: 47 PDRSPSAAAAAGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFL 106
P P + LL CA AI D+ H LW+LN +A P GDS Q+L S FL
Sbjct: 13 PSPKPLRGCGDANFMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFL 72
Query: 107 QALFCRATETGQSCYKTL--VAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILE 166
+AL RA + T+ + A++ H F + F + +PW FG +A+N AIL
Sbjct: 73 RALLSRAVSKTPTLSSTISFLPQADELHRFSVVE--LAAFVDLTPWHRFGFIAANAAILT 132
Query: 167 ALEGETKLHIIDISNTLCTQWPTLLESLATR-NDDTPHLKLTVVITTTIVKPVM----KE 226
A+EG + +HI+D+S T C Q PTL++++A+R N P LKLTVV ++ P + +E
Sbjct: 133 AVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEE 192
Query: 227 IGQRMEKFARLMGVPFEFN--PITNLNHLTELTKEALKV---EEDEAIAINCIGALRRVR 286
+G ++ FA + EF P T + + L ++ L++ +EA+ +NC LR +
Sbjct: 193 LGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQ-LRIYPSSFNEALVVNCHMMLRYIP 252
Query: 287 IEE--------RNNVITMFKSLNPRVLTIVEEEADFISSKNDFQKCFEECLRFYTLYFEM 346
E R + +SLNPR++T++EE+ D ++S+N + + ++ + F+
Sbjct: 253 EEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVD-LTSENLVNR-LKSAFNYFWIPFDT 312
Query: 347 LEESFVATSNERLVLERECSRSIVRLLGCDESEGEMGSERRERGRQWSKRLKEAAFSSAG 406
+ S +R E E S I ++ EG ER E R+W +R++EA F
Sbjct: 313 TD---TFMSEQRRWYEAEISWKIENVVA---KEGAERVERTETKRRWIERMREAEFGGVR 372
Query: 407 FSDDVMDDVKALLKRYRSGWAVSDRPAEEEEDAESRVGVYLKWKEESVVWVSAWKP 443
+D + DVKA+L+ + GW + ++E+D ES V L WK SVV+ + W P
Sbjct: 373 VKEDAVADVKAMLEEHAVGWGM-----KKEDDDESLV---LTWKGHSVVFATVWVP 409
BLAST of MS000664 vs. TAIR 10
Match:
AT2G04890.1 (SCARECROW-like 21 )
HSP 1 Score: 172.6 bits (436), Expect = 7.3e-43
Identity = 116/385 (30.13%), Postives = 196/385 (50.91%), Query Frame = 0
Query: 64 LLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKT 123
+L CAKA+SE + + L + S G+ Q+L +Y L+ L R +G S YK+
Sbjct: 53 VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112
Query: 124 LVAVAEKNHSFDSARRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCT 183
L + +++ F S + E P+ FG++++NGAI EA++ E ++HIID +
Sbjct: 113 LQSREPESYEFLS---YVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172
Query: 184 QWPTLLESLATRNDDTPHLKLTVVITTTIVKPVMKEIGQRMEKFARLMGVPFEFNPITNL 243
QW L+++ A R P++++T V +++ V K R+EK A+ VPF FN ++
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKK----RLEKLAKKFDVPFRFNAVSRP 232
Query: 244 NHLTELTKEALKVEEDEAIAINCIGALRRVRIE------ERNNVITMFKSLNPRVLTIVE 303
+ E+ E L V + EA+ +N L + E R+ ++ M KSL+P+V+T+VE
Sbjct: 233 S--CEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVE 292
Query: 304 EEADFISSKNDFQKCFEECLRFYTLYFEMLEESFVATSNERLVLEREC-SRSIVRLLGCD 363
+E + ++ + F F E L +YT FE ++ ER+ +E+ C +R +V ++ C
Sbjct: 293 QECN--TNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIAC- 352
Query: 364 ESEGEMGSERRERGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPAEEE 423
EG ER E +W R A F S + ++ALL+ Y +G+A+ +R
Sbjct: 353 --EGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDG--- 412
Query: 424 EDAESRVGVYLKWKEESVVWVSAWK 442
+YL W + +V AWK
Sbjct: 413 -------ALYLGWMDRILVSSCAWK 413
BLAST of MS000664 vs. TAIR 10
Match:
AT5G48150.1 (GRAS family transcription factor )
HSP 1 Score: 158.7 bits (400), Expect = 1.1e-38
Identity = 129/433 (29.79%), Postives = 215/433 (49.65%), Query Frame = 0
Query: 23 PISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAAGKWASTLLKECAKAISEKDSNKIHH 82
P S+D+ S ST+ S E + RS A + + L+ CAKA+SE D H
Sbjct: 83 PDSLDLLVDCTDSFDSTA-SQEINGWRSTLEAISRRDLRADLV-SCAKAMSENDLMMAHS 142
Query: 83 FLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDSARRLIL 142
+ L ++ S G+ Q+L +Y L+ L + +G S YK L N + A +L
Sbjct: 143 MMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL------NRCPEPASTELL 202
Query: 143 KFQ----EASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDD 202
+ E P+ FG++++NGAI EA++ E ++HIID +QW TL+++ A R
Sbjct: 203 SYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGG 262
Query: 203 TPHLKLTVV--ITTTIVK-PVMKEIGQRMEKFARLMGVPFEFNPITNLNHLTELTKEALK 262
P +++T + +T+ + + +G R+ K A+ VPFEFN ++ ++E+ + L
Sbjct: 263 PPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVS--VSVSEVKPKNLG 322
Query: 263 VEEDEAIAINCIGALRRVRIE------ERNNVITMFKSLNPRVLTIVEEEADFISSKNDF 322
V EA+A+N L + E R+ ++ M KSL+P+V+T+VE+E++ ++ F
Sbjct: 323 VRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESN--TNTAAF 382
Query: 323 QKCFEECLRFYTLYFEMLEESFVATSNERLVLEREC-SRSIVRLLGCDESEGEMGSERRE 382
F E + +Y FE ++ + +R+ +E+ C +R +V ++ C EG ER E
Sbjct: 383 FPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIAC---EGADRVERHE 442
Query: 383 RGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPAEEEEDAESRVGVYLK 442
+W R A F+ S V +K+LL+ Y SD+ EE D +YL
Sbjct: 443 LLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNY------SDKYRLEERDG----ALYLG 490
BLAST of MS000664 vs. TAIR 10
Match:
AT5G48150.2 (GRAS family transcription factor )
HSP 1 Score: 158.7 bits (400), Expect = 1.1e-38
Identity = 129/433 (29.79%), Postives = 215/433 (49.65%), Query Frame = 0
Query: 23 PISIDMQSSNQLSHTSTSQSSEFSPDRSPSAAAAAGKWASTLLKECAKAISEKDSNKIHH 82
P S+D+ S ST+ S E + RS A + + L+ CAKA+SE D H
Sbjct: 83 PDSLDLLVDCTDSFDSTA-SQEINGWRSTLEAISRRDLRADLV-SCAKAMSENDLMMAHS 142
Query: 83 FLWMLNELASPYGDSDQKLASYFLQALFCRATETGQSCYKTLVAVAEKNHSFDSARRLIL 142
+ L ++ S G+ Q+L +Y L+ L + +G S YK L N + A +L
Sbjct: 143 MMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL------NRCPEPASTELL 202
Query: 143 KFQ----EASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDD 202
+ E P+ FG++++NGAI EA++ E ++HIID +QW TL+++ A R
Sbjct: 203 SYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGG 262
Query: 203 TPHLKLTVV--ITTTIVK-PVMKEIGQRMEKFARLMGVPFEFNPITNLNHLTELTKEALK 262
P +++T + +T+ + + +G R+ K A+ VPFEFN ++ ++E+ + L
Sbjct: 263 PPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVS--VSVSEVKPKNLG 322
Query: 263 VEEDEAIAINCIGALRRVRIE------ERNNVITMFKSLNPRVLTIVEEEADFISSKNDF 322
V EA+A+N L + E R+ ++ M KSL+P+V+T+VE+E++ ++ F
Sbjct: 323 VRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESN--TNTAAF 382
Query: 323 QKCFEECLRFYTLYFEMLEESFVATSNERLVLEREC-SRSIVRLLGCDESEGEMGSERRE 382
F E + +Y FE ++ + +R+ +E+ C +R +V ++ C EG ER E
Sbjct: 383 FPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIAC---EGADRVERHE 442
Query: 383 RGRQWSKRLKEAAFSSAGFSDDVMDDVKALLKRYRSGWAVSDRPAEEEEDAESRVGVYLK 442
+W R A F+ S V +K+LL+ Y SD+ EE D +YL
Sbjct: 443 LLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNY------SDKYRLEERDG----ALYLG 490
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022145183.1 | 1.0e-219 | 99.24 | protein SHORT-ROOT-like, partial [Momordica charantia] | [more] |
XP_038906992.1 | 4.8e-206 | 83.66 | protein SHORT-ROOT-like [Benincasa hispida] | [more] |
XP_022992254.1 | 2.9e-203 | 81.40 | protein SHORT-ROOT-like [Cucurbita maxima] | [more] |
KAG7013919.1 | 3.8e-203 | 81.22 | Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022933337.1 | 5.0e-203 | 81.50 | protein SHORT-ROOT-like [Cucurbita moschata] >XP_022953296.1 protein SHORT-ROOT-... | [more] |
Match Name | E-value | Identity | Description | |
Q9SZF7 | 2.9e-113 | 47.72 | Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1 | [more] |
A2YN56 | 2.6e-106 | 47.29 | Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1 | [more] |
A2XIA8 | 3.5e-106 | 49.18 | Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1 | [more] |
Q75I13 | 4.5e-106 | 49.18 | Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1 | [more] |
Q8H2X8 | 1.3e-105 | 47.07 | Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CVA0 | 4.8e-220 | 99.24 | protein SHORT-ROOT-like OS=Momordica charantia OX=3673 GN=LOC111014689 PE=3 SV=1 | [more] |
A0A6J1JX21 | 1.4e-203 | 81.40 | protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111488628 PE=3 SV=1 | [more] |
A0A6J1EZH2 | 2.4e-203 | 81.50 | protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111440607 PE=3 SV=1 | [more] |
A0A0A0K966 | 1.2e-202 | 81.74 | GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G081510 PE=3 S... | [more] |
A0A1S3CCT8 | 1.3e-201 | 80.81 | protein SHORT-ROOT-like OS=Cucumis melo OX=3656 GN=LOC103498966 PE=3 SV=1 | [more] |