MS000618 (gene) Bitter gourd (TR) v1

Overview


Name	MS000618
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WW domain-containing protein
Location	scaffold93: 435670 .. 437269 (+)
RNA-Seq Expression	MS000618
Synteny	MS000618

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTTTGGATGGAAGTTCCTGAGCTGTCCTTGGCTCCAACAAAGTTTGTGAAAATAAGTGACGATGATGATGAGATGATGATGATGAGTTCTTCTCCACAAAAATTAGTTGAAAGCAAATCATGTTCTAAGAAGAGGAAGCTTCTTGTTCTTCATGATCATAAAGCAAGTGTTGATCTTCAACTCAAGGATCCTCTTCCTCTTGATTGGGAGCAATGTCTTGATCTTCAGGTCTACCTCTCTAGCTCTCTATTTTAATTTTTCATTATTTGGTCTATAATTTTTTTGATTCGAAGATTGCCTGTCGGGATACGTATTTGTGCGGCTACCACTAAATTATCGAACACAGACGAAAGTGGGACTCGAACCTCGACGTTGGGTGTGTCGAGACCACTCTGCCAATACCCGTGCAAGTGCATTATTTGATTTATAAATTGTGTGGTTTCTCGGTCTTATTATCTCTCTTTCTTTCTCTCTCTCTTCCTTTTAGCAACATTGGTAGACTATAATATTATGCTTATCTCCCTCCTCCTTTCCAGCCAGGGAAATTTCATATCATAGCATAAATGATTTTAAACTTTACACAAAAAAAAGATATAAATTGCAAACTTATACAATCATGTGAGACCGACTAAAAAGTGTGATTTAAAAAAAAAAGAAAAAAAAGAAAAAATAATGACATTTTTATAAATTCGCGTTTTTGTTTTCCTTCCTTTATTGTAATTTCCACAATTTAATATTTACAACTTTTCATATATATGTCAAATATAACATAATTTTAACTTTTTCTTAATTTATATTTGAGTTTGACTTTTTGCTACTGTATTTTATTGTCTTTTCATTTTTTGAAAAGTAGCCTGGCAAGGGTAATTACGACCGGAGAATATTCGAACCTTCTCAACATGAAAAAAAAAAGGGATTTTACACACACATATAGTATAAAGTAAATATGTGTTTTCAATTATGTTCAAATTTTACAAAAATAACGCCATCTAAACTCAAATGTAACATAAATAAACTACAAAATGTCACATTTAAACTATATTTGAAATATATTTATATATGAAAAGTTGTGACAGCATTTGAAAATACATATTAAATTAATGCAGATTTCCAATATGTTAACCCCCAAACTATCTTAATTTCCATTTTAACTTCATTTATTATTCTAATATTCTCACTTCTCTTTATATTATCAGATATATATATATGTATATATAATTATTATTTGGTGCAGTCAGGGAAAATGTACTATCTAAACAGAAAAACATTGAGGAAGAGTTGGAATTGGCCAAAAGAAGATTATGATCATCACCAAAAGTTAGAGTTGGAGTTGGAGCTCAACAACATTAATTCTTCTTCATCATCATCATTACCAGCTGAAAATTTGATGATAAATTTCAGACATGGACAAGAACATGGACATGGAGGTTTGAACAGTAGTAGTAACATGGTGGCTTTGCCTTGTCTCAATTGCCATCTTCTTGTCATTCTCTCAAAATCCTCCCCATCTTGCCCTAATTGCAAGCATTTTCATACCCTATTCCCAACCCATTCTTCTTCCAAAACTACCCCTCCCAACACCTTGCCCCTCTTGAAC

mRNA sequence

GAAGTTTGGATGGAAGTTCCTGAGCTGTCCTTGGCTCCAACAAAGTTTGTGAAAATAAGTGACGATGATGATGAGATGATGATGATGAGTTCTTCTCCACAAAAATTAGTTGAAAGCAAATCATGTTCTAAGAAGAGGAAGCTTCTTGTTCTTCATGATCATAAAGCAAGTGTTGATCTTCAACTCAAGGATCCTCTTCCTCTTGATTGGGAGCAATGTCTTGATCTTCAGTCAGGGAAAATGTACTATCTAAACAGAAAAACATTGAGGAAGAGTTGGAATTGGCCAAAAGAAGATTATGATCATCACCAAAAGTTAGAGTTGGAGTTGGAGCTCAACAACATTAATTCTTCTTCATCATCATCATTACCAGCTGAAAATTTGATGATAAATTTCAGACATGGACAAGAACATGGACATGGAGGTTTGAACAGTAGTAGTAACATGGTGGCTTTGCCTTGTCTCAATTGCCATCTTCTTGTCATTCTCTCAAAATCCTCCCCATCTTGCCCTAATTGCAAGCATTTTCATACCCTATTCCCAACCCATTCTTCTTCCAAAACTACCCCTCCCAACACCTTGCCCCTCTTGAAC

Coding sequence (CDS)

GAAGTTTGGATGGAAGTTCCTGAGCTGTCCTTGGCTCCAACAAAGTTTGTGAAAATAAGTGACGATGATGATGAGATGATGATGATGAGTTCTTCTCCACAAAAATTAGTTGAAAGCAAATCATGTTCTAAGAAGAGGAAGCTTCTTGTTCTTCATGATCATAAAGCAAGTGTTGATCTTCAACTCAAGGATCCTCTTCCTCTTGATTGGGAGCAATGTCTTGATCTTCAGTCAGGGAAAATGTACTATCTAAACAGAAAAACATTGAGGAAGAGTTGGAATTGGCCAAAAGAAGATTATGATCATCACCAAAAGTTAGAGTTGGAGTTGGAGCTCAACAACATTAATTCTTCTTCATCATCATCATTACCAGCTGAAAATTTGATGATAAATTTCAGACATGGACAAGAACATGGACATGGAGGTTTGAACAGTAGTAGTAACATGGTGGCTTTGCCTTGTCTCAATTGCCATCTTCTTGTCATTCTCTCAAAATCCTCCCCATCTTGCCCTAATTGCAAGCATTTTCATACCCTATTCCCAACCCATTCTTCTTCCAAAACTACCCCTCCCAACACCTTGCCCCTCTTGAAC

Protein sequence

EVWMEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSLPAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTHSSSKTTPPNTLPLLN

Homology

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BLAST of MS000618 vs. NCBI nr
Match: XP_022150418.1 (uncharacterized protein LOC111018581 [Momordica charantia])

HSP 1 Score: 396.0 bits (1016), Expect = 1.9e-106
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK 63
           MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK
Sbjct: 1   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK 60

Query: 64  DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL 123
           DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL
Sbjct: 61  DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL 120

Query: 124 PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH 183
           PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH
Sbjct: 121 PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH 180

Query: 184 SSSKTTPPNTLPLLN 199
           SSSKTTPPNTLPLLN
Sbjct: 181 SSSKTTPPNTLPLLN 195

[Close]

BLAST of MS000618 vs. NCBI nr
Match: XP_011656508.1 (uncharacterized protein LOC105435750 isoform X2 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-61
Identity = 144/206 (69.90%), Postives = 155/206 (75.24%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH------KA 63
           ME PELSLAPT+    SD+     M SSS + LVE S  CS+KRKLL LHDH      + 
Sbjct: 4   MEFPELSLAPTRQFVKSDE-----MNSSSSKHLVEISSQCSRKRKLL-LHDHHHFIKSQT 63

Query: 64  SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKE----DYDHHQKLELELEL 123
           SVDLQLKDPLPL WEQCLDLQSGKMYYLNRKTLRKSWNWPK+       HHQKL+L LEL
Sbjct: 64  SVDLQLKDPLPLHWEQCLDLQSGKMYYLNRKTLRKSWNWPKDQDHHQQHHHQKLDLALEL 123

Query: 124 NNINSSSSSSLPAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPN 183
           NNINS SS    A+NLM NF  G EHG+   + SSNMVALPCLNCHLLVILSKSSPSCPN
Sbjct: 124 NNINSPSSK---ADNLM-NF--GHEHGNYSFSESSNMVALPCLNCHLLVILSKSSPSCPN 183

Query: 184 CKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CKHFHTLFP   SS  +PPNTLPLLN
Sbjct: 184 CKHFHTLFPNCPSSPNSPPNTLPLLN 197

[Close]

BLAST of MS000618 vs. NCBI nr
Match: KAG7013878.1 (hypothetical protein SDJN02_24047 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-60
Identity = 137/208 (65.87%), Postives = 159/208 (76.44%), Query Frame = 0


Query: 2   VWMEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH------ 61
           ++ME P LSLAPT+F+K  D       ++SS  KL + + SCS+KRKLL+ H H      
Sbjct: 24  LFMEAPHLSLAPTQFMKTDD-------INSSSNKLQQTNSSCSRKRKLLLHHHHPYPHHI 83

Query: 62  --KASVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED-YDHHQKLELELE 121
             + SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED ++  +KL+LELE
Sbjct: 84  NSQTSVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDHHNDDKKLDLELE 143

Query: 122 LNNINSSSSSSLPAENLMINFRHGQEHGHGGLNS-SSNMVALPCLNCHLLVILSKSSPSC 181
           LNNI+SSSS +    N ++NFR    HG+G  +S SSNMVALPCLNCHLLVILSKSSPSC
Sbjct: 144 LNNIDSSSSKA----NSLMNFR----HGYGSSSSQSSNMVALPCLNCHLLVILSKSSPSC 203

Query: 182 PNCKHFHTLFPTHSSSKTTPPNTLPLLN 199
           PNCKHFHTLFP  SS  + PPNTL LLN
Sbjct: 204 PNCKHFHTLFPIPSSPNSPPPNTLSLLN 216

[Close]

BLAST of MS000618 vs. NCBI nr
Match: XP_022929870.1 (uncharacterized protein LOC111436347 [Cucurbita moschata])

HSP 1 Score: 242.3 bits (617), Expect = 3.6e-60
Identity = 137/206 (66.50%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH-------- 63
           ME P LSLAPT+F+K  D       ++SS  KL + + SCS+KRKLL+ H H        
Sbjct: 1   MEAPHLSLAPTQFMKTDD-------INSSSNKLQQTNSSCSRKRKLLLHHHHPYPHHINS 60

Query: 64  KASVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED-YDHHQKLELELELN 123
           + SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED ++  +KL+LELELN
Sbjct: 61  QTSVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDHHNDDKKLDLELELN 120

Query: 124 NINSSSSSSLPAENLMINFRHGQEHGHGGLNS-SSNMVALPCLNCHLLVILSKSSPSCPN 183
           NI+SSSS +    N ++NFR    HG+G  +S SSNMVALPCLNCHLLVILSKSSPSCPN
Sbjct: 121 NIDSSSSKA----NSLMNFR----HGYGSSSSQSSNMVALPCLNCHLLVILSKSSPSCPN 180

Query: 184 CKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CKHFHTLFP  SS  + PPNTL LLN
Sbjct: 181 CKHFHTLFPIPSSPNSPPPNTLSLLN 191

[Close]

BLAST of MS000618 vs. NCBI nr
Match: XP_011656507.1 (uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus] >KAE8646605.1 hypothetical protein Csa_005473 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 4.7e-60
Identity = 144/209 (68.90%), Postives = 155/209 (74.16%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH------KA 63
           ME PELSLAPT+    SD+     M SSS + LVE S  CS+KRKLL LHDH      + 
Sbjct: 4   MEFPELSLAPTRQFVKSDE-----MNSSSSKHLVEISSQCSRKRKLL-LHDHHHFIKSQT 63

Query: 64  SVDLQLKDPLPLDWEQCLDL---QSGKMYYLNRKTLRKSWNWPKE----DYDHHQKLELE 123
           SVDLQLKDPLPL WEQCLDL   QSGKMYYLNRKTLRKSWNWPK+       HHQKL+L 
Sbjct: 64  SVDLQLKDPLPLHWEQCLDLQLVQSGKMYYLNRKTLRKSWNWPKDQDHHQQHHHQKLDLA 123

Query: 124 LELNNINSSSSSSLPAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPS 183
           LELNNINS SS    A+NLM NF  G EHG+   + SSNMVALPCLNCHLLVILSKSSPS
Sbjct: 124 LELNNINSPSSK---ADNLM-NF--GHEHGNYSFSESSNMVALPCLNCHLLVILSKSSPS 183

Query: 184 CPNCKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CPNCKHFHTLFP   SS  +PPNTLPLLN
Sbjct: 184 CPNCKHFHTLFPNCPSSPNSPPNTLPLLN 200

[Close]

BLAST of MS000618 vs. ExPASy TrEMBL
Match: A0A6J1D9E4 (uncharacterized protein LOC111018581 OS=Momordica charantia OX=3673 GN=LOC111018581 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.4e-107
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK 63
           MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK
Sbjct: 1   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK 60

Query: 64  DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL 123
           DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL
Sbjct: 61  DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL 120

Query: 124 PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH 183
           PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH
Sbjct: 121 PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH 180

Query: 184 SSSKTTPPNTLPLLN 199
           SSSKTTPPNTLPLLN
Sbjct: 181 SSSKTTPPNTLPLLN 195

[Close]

BLAST of MS000618 vs. ExPASy TrEMBL
Match: A0A0A0K842 (WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G023890 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.4e-62
Identity = 144/206 (69.90%), Postives = 155/206 (75.24%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH------KA 63
           ME PELSLAPT+    SD+     M SSS + LVE S  CS+KRKLL LHDH      + 
Sbjct: 4   MEFPELSLAPTRQFVKSDE-----MNSSSSKHLVEISSQCSRKRKLL-LHDHHHFIKSQT 63

Query: 64  SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKE----DYDHHQKLELELEL 123
           SVDLQLKDPLPL WEQCLDLQSGKMYYLNRKTLRKSWNWPK+       HHQKL+L LEL
Sbjct: 64  SVDLQLKDPLPLHWEQCLDLQSGKMYYLNRKTLRKSWNWPKDQDHHQQHHHQKLDLALEL 123

Query: 124 NNINSSSSSSLPAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPN 183
           NNINS SS    A+NLM NF  G EHG+   + SSNMVALPCLNCHLLVILSKSSPSCPN
Sbjct: 124 NNINSPSSK---ADNLM-NF--GHEHGNYSFSESSNMVALPCLNCHLLVILSKSSPSCPN 183

Query: 184 CKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CKHFHTLFP   SS  +PPNTLPLLN
Sbjct: 184 CKHFHTLFPNCPSSPNSPPNTLPLLN 197

[Close]

BLAST of MS000618 vs. ExPASy TrEMBL
Match: A0A6J1EVH5 (uncharacterized protein LOC111436347 OS=Cucurbita moschata OX=3662 GN=LOC111436347 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.7e-60
Identity = 137/206 (66.50%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH-------- 63
           ME P LSLAPT+F+K  D       ++SS  KL + + SCS+KRKLL+ H H        
Sbjct: 1   MEAPHLSLAPTQFMKTDD-------INSSSNKLQQTNSSCSRKRKLLLHHHHPYPHHINS 60

Query: 64  KASVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED-YDHHQKLELELELN 123
           + SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED ++  +KL+LELELN
Sbjct: 61  QTSVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDHHNDDKKLDLELELN 120

Query: 124 NINSSSSSSLPAENLMINFRHGQEHGHGGLNS-SSNMVALPCLNCHLLVILSKSSPSCPN 183
           NI+SSSS +    N ++NFR    HG+G  +S SSNMVALPCLNCHLLVILSKSSPSCPN
Sbjct: 121 NIDSSSSKA----NSLMNFR----HGYGSSSSQSSNMVALPCLNCHLLVILSKSSPSCPN 180

Query: 184 CKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CKHFHTLFP  SS  + PPNTL LLN
Sbjct: 181 CKHFHTLFPIPSSPNSPPPNTLSLLN 191

[Close]

BLAST of MS000618 vs. ExPASy TrEMBL
Match: A0A6J1JVM3 (uncharacterized protein LOC111488725 OS=Cucurbita maxima OX=3661 GN=LOC111488725 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.6e-59
Identity = 138/206 (66.99%), Postives = 159/206 (77.18%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVE-SKSCSKKRKLLVLHDH-------- 63
           M+ P LSLAPT+F+K SDD      ++SS  KL + + SCS+KRKLL+ H H        
Sbjct: 1   MDAPRLSLAPTQFMK-SDD------INSSSNKLQQTNSSCSRKRKLLLHHHHPYPHHINS 60

Query: 64  KASVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED-YDHHQKLELELELN 123
           + SVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKED ++  +KL+LELELN
Sbjct: 61  QTSVDLQLKDPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDHHNDDKKLDLELELN 120

Query: 124 NINSSSSSSLPAENLMINFRHGQEHGHGGLNS-SSNMVALPCLNCHLLVILSKSSPSCPN 183
           NI+SSSS +    N ++NFR    HG+G  +S SSNMVALPCLNCHLLVILSKSSPSCPN
Sbjct: 121 NIDSSSSKA----NSLMNFR----HGYGSSSSQSSNMVALPCLNCHLLVILSKSSPSCPN 180

Query: 184 CKHFHTLFPTHSSSKTTPPNTLPLLN 199
           CKHFHTLFP   SS  +PPNTL LLN
Sbjct: 181 CKHFHTLFPI-PSSPNSPPNTLSLLN 190

[Close]

BLAST of MS000618 vs. ExPASy TrEMBL
Match: A0A5J5AMA2 (WW domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_006048 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 7.1e-38
Identity = 99/190 (52.11%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 4   MEVPELSLAPTKFVKISDDDDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLK 63
           MEVPELSLAPT+   + D      +  S    + + KSCS    L      + +VDLQLK
Sbjct: 48  MEVPELSLAPTR--GVFDKSTNSSLPESETNLVRKRKSCSADHLLKTQPMIQTNVDLQLK 107

Query: 64  DPLPLDWEQCLDLQSGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSL 123
           DPLPLDWEQCLDL+SG+MYYLNRKTLRKSW WPK+     QKL+L+L   NI+SS++   
Sbjct: 108 DPLPLDWEQCLDLESGRMYYLNRKTLRKSWEWPKD-----QKLDLDL---NISSSNNEQC 167

Query: 124 PAENLMINFRHGQEHGHGGLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTH 183
            A   +      Q+      +S+SNMVAL CLNCHLLVI+SKSSPSCPNCK+ H+L PT 
Sbjct: 168 SASKTL------QDSKRQHFSSNSNMVALACLNCHLLVIVSKSSPSCPNCKYVHSL-PTQ 220

Query: 184 SSSKTTPPNT 194
            S  ++  +T
Sbjct: 228 QSPSSSKVHT 220

[Close]

BLAST of MS000618 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 22/51 (43.14%), Postives = 29/51 (56.86%), Query Frame = 0


Query: 144 NSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTHSSSKTTPPNTL 195
           +    MV   C+ CH+LV+L  S+P CPNCK  H     HSS+K   P+ L
Sbjct: 168 HKGQEMVTTVCMKCHMLVMLCTSTPVCPNCKFMHP--HDHSSTKLFKPSNL 216

[Close]

BLAST of MS000618 vs. TAIR 10
Match: AT4G08910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 49/178 (27.53%), Postives = 84/178 (47.19%), Query Frame = 0


Query: 23  DDEMMMMSSSPQKLVESKSCSKKRKLLVLHDHKASVDLQLKD-----PLPLDWEQCLDLQ 82
           +DE+   S   Q L+ S    K+R+    ++   +++  +++      + LD E  L   
Sbjct: 42  NDEIFKRSDESQNLIVSPFDHKRRR---FNEDSKNMNNNIEEGYNHHHMSLDLELNL--- 101

Query: 83  SGKMYYLNRKTLRKSWNWPKEDYDHHQKLELELELNNINSSSSSSLPAENLMINFRHGQE 142
           S  +  LN      ++N   E+ +  +K+  +  +  + +  S S  A +L  +     +
Sbjct: 102 SPSLIDLNHHHDLSNYNKGYEEDERKKKMMEKGSVLGLETKKSMSRVAFDLDDDC---CD 161

Query: 143 HGHG-GLNSSSNMVALPCLNCHLLVILSKSSPSCPNCKHFHTLFPTHSSSKTTPPNTL 195
            G G G  S   MVA  C+ CH+LV+L K+SP+CPNCK  H+   T  S   TP  +L
Sbjct: 162 RGDGVGGRSEEEMVARVCMKCHMLVMLCKASPACPNCKFMHSPEDTSLSLLFTPKPSL 210

[Close]

BLAST of MS000618 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 31/116 (26.72%), Postives = 53/116 (45.69%), Query Frame = 0


Query: 66  LPLDWEQCLDLQSGKMYYLN-------RKTLRKSWNWPKEDYDHHQKLELELELNNINSS 125
           LP  WEQCLDL++G++YY+N       ++  RK  N   +  D +  +  E + +  +S 
Sbjct: 59  LPCHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSEEDSSYYDSE 118

Query: 126 SSSSLPAENLMINFRHGQEHGHGGLNSSSN-MVALPCLNCHLLVILSKSSPSCPNC 174
            SSS  + +   N +  +E          + +V   C  C +  ++ K    CP C
Sbjct: 119 ESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVEDCPKC 174

The following BLAST results are available for this feature:

BLAST of MS000618 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150418.1	1.9e-106	100.00	uncharacterized protein LOC111018581 [Momordica charantia]	[more]
XP_011656508.1	1.1e-61	69.90	uncharacterized protein LOC105435750 isoform X2 [Cucumis sativus]	[more]
KAG7013878.1	2.1e-60	65.87	hypothetical protein SDJN02_24047 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022929870.1	3.6e-60	66.50	uncharacterized protein LOC111436347 [Cucurbita moschata]	[more]
XP_011656507.1	4.7e-60	68.90	uncharacterized protein LOC105435750 isoform X1 [Cucumis sativus] >KAE8646605.1 ...	[more]

BLAST of MS000618 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS000618 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9E4	9.4e-107	100.00	uncharacterized protein LOC111018581 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A0A0K842	5.4e-62	69.90	WW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G023890 PE=4 SV=...	[more]
A0A6J1EVH5	1.7e-60	66.50	uncharacterized protein LOC111436347 OS=Cucurbita moschata OX=3662 GN=LOC1114363...	[more]
A0A6J1JVM3	5.6e-59	66.99	uncharacterized protein LOC111488725 OS=Cucurbita maxima OX=3661 GN=LOC111488725...	[more]
A0A5J5AMA2	7.1e-38	52.11	WW domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_006048 PE=4 SV...	[more]

BLAST of MS000618 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78170.1	1.0e-04	43.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G08910.1	1.3e-04	27.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G33510.1	2.3e-04	26.72	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.70.10		coord: 61..114 e-value: 3.9E-8 score: 34.8
None	No IPR available	PANTHER	PTHR14791:SF39	SUBFAMILY NOT NAMED	coord: 4..198
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 4..198
IPR001202	WW domain	PROSITE	PS50020	WW_DOMAIN_2	coord: 64..98 score: 11.3687
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 64..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000618.1	MS000618.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding