MS000563 (gene) Bitter gourd (TR) v1

Overview
NameMS000563
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Locationscaffold64: 712716 .. 713033 (-)
RNA-Seq ExpressionMS000563
SyntenyMS000563
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCT

mRNA sequence

CGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCT

Coding sequence (CDS)

CGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCT

Protein sequence

RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Homology
[Close]
BLAST of MS000563 vs. NCBI nr
Match: YP_009460211.1 (ribosomal protein S7 [Dalbergia hainanensis] >YP_009460228.1 ribosomal protein S7 [Dalbergia hainanensis] >YP_009472199.1 ribosomal protein S7 [Arachis hypogaea] >YP_009472216.1 ribosomal protein S7 [Arachis hypogaea] >YP_009512227.1 ribosomal protein S7 [Stylosanthes hamata] >YP_009512240.1 ribosomal protein S7 [Stylosanthes hamata] >YP_009512308.1 ribosomal protein S7 [Stylosanthes scabra] >YP_009512321.1 ribosomal protein S7 [Stylosanthes scabra] >YP_009512389.1 ribosomal protein S7 [Stylosanthes viscosa] >YP_009512402.1 ribosomal protein S7 [Stylosanthes viscosa] >YP_009681007.1 ribosomal protein S7 [Dalbergia cultrata] >YP_009681023.1 ribosomal protein S7 [Dalbergia cultrata] >YP_009765551.1 ribosomal protein S7 [Tipuana tipu] >YP_009765564.1 ribosomal protein S7 [Tipuana tipu] >YP_009863445.1 ribosomal protein S7 [Dalbergia tonkinensis] >YP_009863458.1 ribosomal protein S7 [Dalbergia tonkinensis] >YP_009863528.1 ribosomal protein S7 [Dalbergia odorifera] >YP_009863541.1 ribosomal protein S7 [Dalbergia odorifera] >YP_009863611.1 ribosomal protein S7 [Dalbergia yunnanensis] >YP_009863624.1 ribosomal protein S7 [Dalbergia yunnanensis] >YP_009865499.1 ribosomal protein S7 [Dalbergia sissoo] >YP_009865512.1 ribosomal protein S7 [Dalbergia sissoo] >YP_009865582.1 ribosomal protein S7 [Dalbergia frutescens] >YP_009865596.1 ribosomal protein S7 [Dalbergia frutescens] >YP_009865666.1 ribosomal protein S7 [Dalbergia obovata] >YP_009865680.1 ribosomal protein S7 [Dalbergia obovata] >YP_009865750.1 ribosomal protein S7 [Dalbergia cearensis] >YP_009865763.1 ribosomal protein S7 [Dalbergia cearensis] >YP_009865833.1 ribosomal protein S7 [Dalbergia chlorocarpa] >YP_009865846.1 ribosomal protein S7 [Dalbergia chlorocarpa] >YP_009865916.1 ribosomal protein S7 [Dalbergia armata] >YP_009865930.1 ribosomal protein S7 [Dalbergia armata] >YP_009866000.1 ribosomal protein S7 [Dalbergia martinii] >YP_009866014.1 ribosomal protein S7 [Dalbergia martinii] >YP_009866084.1 ribosomal protein S7 [Dalbergia vietnamensis] >YP_009866098.1 ribosomal protein S7 [Dalbergia vietnamensis] >YP_009867993.1 ribosomal protein S7 [Pterocarpus marsupium] >YP_009868010.1 ribosomal protein S7 [Pterocarpus marsupium] >YP_009868078.1 ribosomal protein S7 [Pterocarpus pedatus] >YP_009868095.1 ribosomal protein S7 [Pterocarpus pedatus] >YP_009868163.1 ribosomal protein S7 [Pterocarpus indicus] >YP_009868180.1 ribosomal protein S7 [Pterocarpus indicus] >YP_009868248.1 ribosomal protein S7 [Pterocarpus macrocarpus] >YP_009868265.1 ribosomal protein S7 [Pterocarpus macrocarpus] >YP_009868333.1 ribosomal protein S7 [Pterocarpus santalinus] >YP_009868350.1 ribosomal protein S7 [Pterocarpus santalinus] >XP_025613514.1 uncharacterized protein LOC112706429 [Arachis hypogaea] >XP_029152625.1 uncharacterized protein LOC114927082 [Arachis hypogaea] >XP_029152628.1 uncharacterized protein LOC114927087 [Arachis hypogaea] >XP_029152631.1 uncharacterized protein LOC114927091 [Arachis hypogaea] >AZP79292.1 ribosomal protein S7 [Pterocarpus tinctorius] >QFS94843.1 ribosomal protein S7 [Arachis monticola] >QFS94923.1 ribosomal protein S7 [Arachis stenosperma] >QFS95007.1 ribosomal protein S7 [Arachis batizocoi] >QFS95090.1 ribosomal protein S7 [Arachis diogoi] >QFS95174.1 ribosomal protein S7 [Arachis duranensis] >QFS95256.1 ribosomal protein S7 [Arachis paraguariensis] >QFS95339.1 ribosomal protein S7 [Arachis cardenasii] >QFS95422.1 ribosomal protein S7 [Arachis villosa] >QFS95504.1 ribosomal protein S7 [Arachis helodes] >QFS95588.1 ribosomal protein S7 [Arachis hoehnei] >QFS95671.1 ribosomal protein S7 [Arachis correntina] >QFS95754.1 ribosomal protein S7 [Arachis ipaensis] >QVX29875.1 ribosomal protein S7 [Geoffroea spinosa] >QVX29958.1 ribosomal protein S7 [Centrolobium microchaete] >QWY87315.1 ribosomal protein S7 [Pterocarpus angolensis] >QWY87398.1 ribosomal protein S7 [Pterocarpus erinaceus] >QWY87481.1 ribosomal protein S7 [Pterocarpus soyauxii] >QYK91514.1 ribosomal protein S7 [Arachis pintoi] >QZJ46759.1 ribosomal protein S7 [Dalbergia nigra])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. NCBI nr
Match: YP_009870081.1 (ribosomal protein S7 [Bonnetia paniculata] >YP_009870094.1 ribosomal protein S7 [Bonnetia paniculata] >QKJ82022.1 ribosomal protein S7 [Bonnetia paniculata] >QKJ82035.1 ribosomal protein S7 [Bonnetia paniculata])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. NCBI nr
Match: OWK25895.1 (30S ribosomal protein S7, partial [Rhizobium yanglingense] >QGA86559.1 ribosomal protein S7, partial [Entada rheedei])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 1   RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 106

[Close]
BLAST of MS000563 vs. NCBI nr
Match: YP_005088851.1 (ribosomal protein S7 [Pongamia pinnata] >YP_005088864.1 ribosomal protein S7 [Pongamia pinnata] >QRI60882.1 ribosomal protein S7 [Millettia dura] >QVX30875.1 ribosomal protein S7 [Lonchocarpus utilis] >AET11388.1 ribosomal protein S7 [Pongamia pinnata] >AET11400.1 ribosomal protein S7 [Pongamia pinnata] >QRI60895.1 ribosomal protein S7 [Millettia dura])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. NCBI nr
Match: YP_009769129.1 (ribosomal protein S7 [Falcataria moluccana] >YP_009769151.1 ribosomal protein S7 [Falcataria moluccana] >QIS99747.1 ribosomal protein S7 [Falcataria moluccana] >QIS99769.1 ribosomal protein S7 [Falcataria moluccana])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 47  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 106

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 107 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 152

[Close]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match: Q49KT8 (30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.5e-50
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match: Q6EM99 (30S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.5e-50
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match: Q9B1A1 (30S ribosomal protein S7, chloroplastic OS=Lotus japonicus OX=34305 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.5e-50
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match: B1NWJ5 (30S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.5e-50
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match: P07135 (30S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.1e-50
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy TrEMBL
Match: A0A1D0CEA0 (30S ribosomal protein S7, chloroplastic OS=Acacia heteroclita subsp. heteroclita OX=1708232 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy TrEMBL
Match: A0A0N6WC30 (30S ribosomal protein S7, chloroplastic OS=Corymbia henryi OX=183804 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy TrEMBL
Match: A0A1D0C4Q1 (30S ribosomal protein S7, chloroplastic OS=Acacia acanthoclada subsp. glaucescens OX=1708224 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy TrEMBL
Match: A0A7G9M8A0 (30S ribosomal protein S7, chloroplastic OS=Euphorbia ebracteolata OX=526193 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. ExPASy TrEMBL
Match: U6A5X7 (Ribosomal protein S7 OS=Monocostus uniflorus OX=4634 GN=rps7 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 196.8 bits (499), Expect = 8.6e-51
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RA+KKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. TAIR 10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 196.8 bits (499), Expect = 8.6e-51
Identity = 103/106 (97.17%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 60
           RA+KKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL
Sbjct: 45  RALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWL 104

Query: 61  LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 107
           LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA
Sbjct: 105 LGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA 150

[Close]
BLAST of MS000563 vs. TAIR 10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05
Identity = 31/104 (29.81%), Postives = 56/104 (53.85%), Query Frame = 0 

Query: 9   KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRP 68
           +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K  
Sbjct: 41  RTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK-- 100

Query: 69  GRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAEANRA 107
            R +++++S      +E++DA +  G A RK+E  H +A  NR+
Sbjct: 101 -RRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTNRS 141

[Close]
BLAST of MS000563 vs. TAIR 10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7 )

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05
Identity = 31/104 (29.81%), Postives = 56/104 (53.85%), Query Frame = 0 

Query: 9   KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRP 68
           +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K  
Sbjct: 41  RTERDVIKLMVDAVENIKPICEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFK-- 100

Query: 69  GRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAEANRA 107
            R +++++S      +E++DA +  G A RK+E  H +A  NR+
Sbjct: 101 -RRISYRISLEKCSFAEILDAYQKRGSARRKRENLHGLASTNRS 141

The following BLAST results are available for this feature:
BLAST of MS000563 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009460211.14.2e-4798.11ribosomal protein S7 [Dalbergia hainanensis] >YP_009460228.1 ribosomal protein S... [more]
YP_009870081.14.2e-4798.11ribosomal protein S7 [Bonnetia paniculata] >YP_009870094.1 ribosomal protein S7 ... [more]
OWK25895.14.2e-4798.1130S ribosomal protein S7, partial [Rhizobium yanglingense] >QGA86559.1 ribosomal... [more]
YP_005088851.14.2e-4798.11ribosomal protein S7 [Pongamia pinnata] >YP_005088864.1 ribosomal protein S7 [Po... [more]
YP_009769129.14.2e-4798.11ribosomal protein S7 [Falcataria moluccana] >YP_009769151.1 ribosomal protein S7... [more]
BLAST of MS000563 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q49KT85.5e-5098.1130S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus O... [more]
Q6EM995.5e-5098.1130S ribosomal protein S7, chloroplastic OS=Euonymus alatus OX=4307 GN=rps7 PE=3 ... [more]
Q9B1A15.5e-5098.1130S ribosomal protein S7, chloroplastic OS=Lotus japonicus OX=34305 GN=rps7-A PE... [more]
B1NWJ55.5e-5098.1130S ribosomal protein S7, chloroplastic OS=Manihot esculenta OX=3983 GN=rps7-A P... [more]
P071357.1e-5097.1730S ribosomal protein S7, chloroplastic OS=Glycine max OX=3847 GN=rps7-A PE=3 SV... [more]
BLAST of MS000563 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1D0CEA02.0e-4798.1130S ribosomal protein S7, chloroplastic OS=Acacia heteroclita subsp. heteroclita... [more]
A0A0N6WC302.0e-4798.1130S ribosomal protein S7, chloroplastic OS=Corymbia henryi OX=183804 GN=rps7 PE=... [more]
A0A1D0C4Q12.0e-4798.1130S ribosomal protein S7, chloroplastic OS=Acacia acanthoclada subsp. glaucescen... [more]
A0A7G9M8A02.0e-4798.1130S ribosomal protein S7, chloroplastic OS=Euphorbia ebracteolata OX=526193 GN=r... [more]
U6A5X72.0e-4798.11Ribosomal protein S7 OS=Monocostus uniflorus OX=4634 GN=rps7 PE=3 SV=1[more]
BLAST of MS000563 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01240.18.6e-5197.17ribosomal protein S7 [more]
ATCG00900.18.6e-5197.17Ribosomal protein S7p/S5e family protein [more]
AT2G07696.11.1e-0529.81Ribosomal protein S7p/S5e family protein [more]
ATMG01270.11.1e-0529.81mitochondrial ribosomal protein S7 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 1..106
e-value: 3.9E-36
score: 122.8
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 1..106
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 2..105
e-value: 1.3E-36
score: 125.4
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMTIGR01029TIGR01029coord: 2..106
e-value: 8.1E-41
score: 137.5
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 1..105
e-value: 2.9E-41
score: 143.3
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 1..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availablePANTHERPTHR11205:SF4130S RIBOSOMAL PROTEIN S7, CHLOROPLASTICcoord: 1..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS000563.1MS000563.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome