MS000544 (gene) Bitter gourd (TR) v1

Overview
NameMS000544
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHistone deacetylase
Locationscaffold64: 278429 .. 283410 (-)
RNA-Seq ExpressionMS000544
SyntenyMS000544
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTTTTATGACAGTTATTTCACTCCTGACACATACGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAATTGTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTATGACAAATCACATTTTTCAATCCCAAAATTTATTTTGTTTTGATGTAGATGCTCCTCTAGAATGCTGTCTGACGCTTTTTTTTAATTCTCAGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTTCACAACAATGCGGCAGTTTCTGCATTGGCTGCTCAGGCTGCTGGTGCCAAGAAAGTGCTAATAGTTGATTGGGTAAGGTTGATATTTTTTTGCTATGTAGTAGGGGCCCATAACCATCTTCTATTCTCTCTCTAACGATTGTTATTTTCTTTTCATCCTTTCTACTTTAGGATGTTCATCATGGAAATGGAACGCAGGAAATATTTGAGCAAAATAAATCGGTATGCTCTATATGAAATGAACTTCTGGTTTCTCTTCCTTTTCTGATCTCTGATTTTTTGGAAGATGGAAAATTTTGCTGGACAAGATGGTTTCATTGTTGTAGGTTATAACTACAAGCCTTGATTGGCATTCATGAATATAATCAATGTCTTCAGAGCATCCTTTTGAATTGGAGTCCCTTCCTTTAGGTGGGCCTCCAGTTGTGGGGCTGATTTTTTTTGTATGCCCTTATATATGTGTTATTTTTTGTTTTCACTTTTATCAATGAAAAGTCAATGTAGGTTTTTTAACAACTTTCTTCTCCTGTTTCACCTTTTTTTTTTACAAGCGCTCATCTTTGTGATTTTCATGTTTGAGTCACATTTGCAGAATTTATACAGTTCCGATGACAAACTTGACCAATTTGTAGGTCTTGTATATATCTTTACATAGACATGAGTTAGGGAGGTTCTATCCTGGAACTGGAGCTGCTGATGAGGTAACTTATTATAGTTTACTCAATATTGCATATATAATCATAAATTTTATTTATTTCTATGTGCTTTGCTTACAAATACAATTTCTTTTTGTGCACTTTGGCCTCCAATCAACCAAAAAGCTTGTAGCCTTGGAGTGTGTCTTTTACCATGAGAGCATTATTACTTATAAAGACTATTTACTTCTTCAGGTGGGCACAATGGGAGCAGAAGGATATTGTGTGAATGTCCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCAATAGGTTACTTCCATTACTCGTTTCTTATCCCAAAAAAAAAAAAGAAGTTATTCCCATTGCTGATATTTGTTTTATCTATTGTCAAAATGTTTTCTGCTAAGAAGCACTGACACTTCATTTTAGGTAACGTATCCGCATTGGACACTCCGACATTTATCGGACACTTGTTAGCTCAATAGATTTGTGTCATGCACTAGTTATACAAAGTGAATATGGATTCGACACTTGTTAGCTACATATTGAACACTTGTTAAGCATAAGAAATAGCCATAAATGGTAATATAGGACAAAATAATAAATTTTGAAAGTAAAATACAATTTAGCTTATTGACTTTGAATTTCCTTCTTCTATAAAACTGATCTATACTTAAAAAAGAGTGTATATTTTAATAAATGTGTTCTTGCAGTGTCCGTGGTCCTAGATTTTTAGAAAATGATGTGTCACCATGTCCGTGTCGTGTCCTTATTCATGCTTCTTAGATTTTCTAGAGAGAAATAGTGTAGAACATTTTCTATTGCACCTATTAATCATCCTCCTTTTAGAAAAGAACACTTCTATTGCAGGGAATGAAAATGATAAAATGATGTTGGAATTATGCCATGATATATGGTTTTCAGTGATATGGATGGCTTAAATGTACAAATTACTACGACCTCGTGGTGCCTTACTCATAGGAGATTCTTTTGTAATTACAGTCTAGCTTTACTTTCCCGTGATTGGCAAGCTATAATGTGGTAGCTTTCTTGGGGAGGGCCTCCTCGGCCCTTGCCCGTAGGTTGTTTCTCTCCTTTTGTTATATTATATTCCGTTTCTTATAAAAAAAAAGGTATTGTTTTCTCTCACCATCTTTCTAAGTTTGATCTTTTAACTTCAATCTTTCACCTTTTCAATTTTTTATTTTAAGAAGAGCCACACGTATCTTGTGCTGTTTTATCACTCTGAGTTCCTTTCCTCCCCTCTAAATATATGAATAAAACCTGATTTTTTAGGCCAGATTTAAAAAAAAAAAATAGTCACGAGTGTTGTGTTTTGAGGCCAGCATCATTTGTCCTCTTCCCTTATGTTTTCCTTTGATGACAGTTTGATTCAGAAGAAAAGACTTATGGATTTTTTTGCTTATCAAAATTATGTATTGCATTTTGCATCATTCACTTTGATGTCTTAGGTTCTGTTTGGTGCATTTTCTCAGATGACATAGGAATGTATCTAAAATCTCAACAAATGGTTTTTGAAAGTTCACCTCTTAAGCAACATTTGAGGACTGGTTGAGGTTTGAGAAAATATATATTTGAGGTTATTTACTGTGCCTTCTAAATATTTTATTTCAGCAAATTGTTATCTTGAATGTCATGCATCCGGTTCTTGTTGGAAGTGTTTCTTATGAACAAAGGAGAGGAATAATGGTTGCAGAATTTATTTTGTATTGTTTTCATTAAAAACAAAAACGTTTTCAGAACGGCCTGTGAAAACATATAATCTCTTTTCGAAAATTTTCAATCTTCCACATGTTGCTCACATTATGTTATGCACTTGTTGCCCGCCCCTCTGAATGTTGATGGCCTCTTTTTGCAACTTGCCATTTGACATTTGTCTGGCTTTCAAGAATGGGGCTAAAATCTGGAGCTAAATCATTATTTATTGGAGAGCCTTTGATGTTATCTTGTTTGGTCTGGAGGATATATATAATTCTCTTATTTGTTAACTTTTTCACATCGTTACAATTTCCATCATATTTCTTATTATAAAAGTAATGAAAAGGTGAGTTGGAGAAATTGAATTCTACCTCATCATAATTCTTGTCGTAACTCTATTTGTGGGAATGTAGAGCACTATTTTTAAAATATCTAGAGCACTAATTCTGTAGCTTTATTTTTTAAAAGTTGAAGATGCAGTATAGTACTAATTTTAACTCCGACATTTCTGATACCTTTAATCTGCTATCATTGCAGCTTCTGCTTTTACCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGGGATCCATTGGGAATGTGTGACGTAAGGATTTTCTTATTGAATGATTGTTATATTATTAGGAATGTCCTCAATTTAGATTCACTGTTTAAATTTCCTGAGGTCAGCACTGTCTTGAATTCTGGTTTTCTTCTCGTATTCCAGGTAACTCCTGCTGGGTATGCACACATGACTCACTTGTTGAATATTGTCTCTGGTGGGAAGTTGCTTGTTATTCTTGAAGGCGGGTCTGTGCTCATTTCTTGATCTTTGTGGCTTCTGCTCAGAGTAGGTTAAATGGATTTTATACTGTCACGTGCTAAGTTGATTGAGATGTCTATTTGCAGCTACAATCTTCGTTCCATCTCATCTTCAGCTACAGCAGTAATCAAGGTGCTTTGTTCTGAACAATGGAAAGACAGGAACTTAAATTGTGCATTATATCCTTTTTTGTCTTTTCAGTTGCTAACCTTGTCTCGTTTCTAATTCATATATATAATAATATATTATGCTAGCTATCTCAATTTTATACTATCATGGTTTCTAGGGTGTAACTTATTCTACCTCATTGATTCTTTTCGTTTCTGTTCTGACATTAAAAATAGGTATTGCTGGGTGAAAGTCCTGGATGTGATTTGGACGATCGTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTAAGATTCAAAAGAATTTCTGGCCCGTGCTGGAATCTAGCTTTTCAAAATTACAGTCACAGTGGGAGACATATGATACTGAAAGAAGTGAGTAGTCTCTCTCCCTCGTGTTAGTCGTGTATATGTGGGGCGAGAGTGTTAGTGTAATGGGTTAAGCTGGCTGGGGGTAGATAACTTGAGTGACTGGAGGTTAAACTGAAATAAAGAACCAATTGAACCAATTTTGTCTTTTTCATTCTTGTTTTTTGTTTTTTGCTGTGTTTCTTTTGAAAATCAATTGATAAGCAAATTTAGCTATGATGGCTAATTCTCTATTCGAAGCAGAGAACAGGGATAGCATTAGAAAAGATTCAAACTTTATGCAAATGGTTCACCTCTATGATTTATTGGAGTCGGTTTCTGCTAAATATTTGTATGGTAGAAGCAAATATAGCTGTGCTCACCTCACCCGCTTCTTGAAAAAGCAATTACAAATTTAAGAGAAAGCAGAAAGTCTATAGTTGTTCTTTTTATTTTTTATTTTAATAATTATTATTAGATAAGAAACCCACCGAAAGTTTGCAAAAGTCGCAACAAAACAACATAAAAGACAAAGGGACGAAACACCCATTTTTCAAAAAGGATGGACTGATAGTAAAGGTAGAGTAGTTACAAAAATGGTTGTGTTGCACACTCCAATTCGAGGCAGTGAATGGCTTTGTTATAATGATATGCAAGTCTATGGTGCTAGTATTGCCCGATAGTCAAAGGAGAAGTTGTGAATTTGGATGTTATTGAAGTTACGAGTTTCTGGTTTTATTGGTGGTCGGTATTTAGGATCGATAGTAGTATCCCTTGAATTTGCAGAATTTAAACATTNACTTAAACCTTTATATATGATCCTCTGCTGACAGTTCTCTTATGCAGGAAAACCACGTAAGAAGAGAAGACACGCTGCTGTGGCTCCAAGATGTTGGCGATGGGGACGGAAGAGGCTATTGTATCATCTACTAAACGGGCGACTTCGTGTAAGATCAAAGGGATGC

mRNA sequence

TTTTATTTTTATGACAGTTATTTCACTCCTGACACATACGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAATTGTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTTCACAACAATGCGGCAGTTTCTGCATTGGCTGCTCAGGCTGCTGGTGCCAAGAAAGTGCTAATAGTTGATTGGGATGTTCATCATGGAAATGGAACGCAGGAAATATTTGAGCAAAATAAATCGGTCTTGTATATATCTTTACATAGACATGAGTTAGGGAGGTTCTATCCTGGAACTGGAGCTGCTGATGAGGTGGGCACAATGGGAGCAGAAGGATATTGTGTGAATGTCCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCAATAGCTTCTGCTTTTACCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGGGATCCATTGGGAATGTGTGACGTAACTCCTGCTGGGTATGCACACATGACTCACTTGTTGAATATTGTCTCTGGTGGGAAGTTGCTTGTTATTCTTGAAGGCGGCTACAATCTTCGTTCCATCTCATCTTCAGCTACAGCAGTAATCAAGGTATTGCTGGGTGAAAGTCCTGGATGTGATTTGGACGATCGTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTAAGATTCAAAAGAATTTCTGGCCCGTGCTGGAATCTAGCTTTTCAAAATTACAGTCACAGTGGGAGACATATGATACTGAAAGAAGAAAACCACGTAAGAAGAGAAGACACGCTGCTGTGGCTCCAAGATGTTGGCGATGGGGACGGAAGAGGCTATTGTATCATCTACTAAACGGGCGACTTCGTGTAAGATCAAAGGGATGC

Coding sequence (CDS)

TTTTATTTTTATGACAGTTATTTCACTCCTGACACATACGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAATTGTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTTCACAACAATGCGGCAGTTTCTGCATTGGCTGCTCAGGCTGCTGGTGCCAAGAAAGTGCTAATAGTTGATTGGGATGTTCATCATGGAAATGGAACGCAGGAAATATTTGAGCAAAATAAATCGGTCTTGTATATATCTTTACATAGACATGAGTTAGGGAGGTTCTATCCTGGAACTGGAGCTGCTGATGAGGTGGGCACAATGGGAGCAGAAGGATATTGTGTGAATGTCCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCAATAGCTTCTGCTTTTACCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGGGATCCATTGGGAATGTGTGACGTAACTCCTGCTGGGTATGCACACATGACTCACTTGTTGAATATTGTCTCTGGTGGGAAGTTGCTTGTTATTCTTGAAGGCGGCTACAATCTTCGTTCCATCTCATCTTCAGCTACAGCAGTAATCAAGGTATTGCTGGGTGAAAGTCCTGGATGTGATTTGGACGATCGTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTAAGATTCAAAAGAATTTCTGGCCCGTGCTGGAATCTAGCTTTTCAAAATTACAGTCACAGTGGGAGACATATGATACTGAAAGAAGAAAACCACGTAAGAAGAGAAGACACGCTGCTGTGGCTCCAAGATGTTGGCGATGGGGACGGAAGAGGCTATTGTATCATCTACTAAACGGGCGACTTCGTGTAAGATCAAAGGGATGC

Protein sequence

FYFYDSYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGDPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPRCWRWGRKRLLYHLLNGRLRVRSKGC
Homology
BLAST of MS000544 vs. NCBI nr
Match: XP_022153231.1 (histone deacetylase 15 isoform X2 [Momordica charantia])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 275 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 334

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 335 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 394

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 395 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 454

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 455 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 514

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 515 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 574

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 575 CWRWGRKRLLYHLLNGRLRVRSKGC 599

BLAST of MS000544 vs. NCBI nr
Match: XP_022153232.1 (histone deacetylase 15 isoform X3 [Momordica charantia])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 274 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 333

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 334 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 393

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 394 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 453

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 454 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 513

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 514 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 573

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 574 CWRWGRKRLLYHLLNGRLRVRSKGC 598

BLAST of MS000544 vs. NCBI nr
Match: XP_022153227.1 (histone deacetylase 15 isoform X1 [Momordica charantia] >XP_022153228.1 histone deacetylase 15 isoform X1 [Momordica charantia] >XP_022153229.1 histone deacetylase 15 isoform X1 [Momordica charantia] >XP_022153230.1 histone deacetylase 15 isoform X1 [Momordica charantia])

HSP 1 Score: 663.3 bits (1710), Expect = 1.1e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 276 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 335

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 336 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 395

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 396 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 455

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 456 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 515

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 516 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 575

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 576 CWRWGRKRLLYHLLNGRLRVRSKGC 600

BLAST of MS000544 vs. NCBI nr
Match: KAG7022142.1 (Histone deacetylase 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 611.3 bits (1575), Expect = 4.9e-171
Identity = 301/324 (92.90%), Postives = 307/324 (94.75%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASE+ SGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 291 YFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLH 350

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE GRFYPGTGA
Sbjct: 351 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGA 410

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAF PDLTIISAGFDAARGD
Sbjct: 411 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGD 470

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYA MT+LLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 471 PLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 530

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DD LPSRAGMKTVLDVL IQKNFWPVLESSFS+LQSQ+E Y T+RRKPRKKR    V P 
Sbjct: 531 DDPLPSRAGMKTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPL 590

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKG 331
           CWRW RKRLLYHLL G+LRVR KG
Sbjct: 591 CWRWSRKRLLYHLLKGQLRVRGKG 614

BLAST of MS000544 vs. NCBI nr
Match: XP_022925326.1 (histone deacetylase 15 isoform X4 [Cucurbita moschata])

HSP 1 Score: 611.3 bits (1575), Expect = 4.9e-171
Identity = 301/324 (92.90%), Postives = 307/324 (94.75%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASE+ SGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 138 YFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLH 197

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE GRFYPGTGA
Sbjct: 198 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGA 257

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAF PDLTIISAGFDAARGD
Sbjct: 258 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGD 317

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYA MT+LLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 318 PLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 377

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DD LPSRAGMKTVLDVL IQKNFWPVLESSFS+LQSQ+E Y T+RRKPRKKR    V P 
Sbjct: 378 DDPLPSRAGMKTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPL 437

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKG 331
           CWRW RKRLLYHLL G+LRVR KG
Sbjct: 438 CWRWSRKRLLYHLLKGQLRVRGKG 461

BLAST of MS000544 vs. ExPASy Swiss-Prot
Match: Q8GXJ1 (Histone deacetylase 15 OS=Arabidopsis thaliana OX=3702 GN=HDA15 PE=1 SV=2)

HSP 1 Score: 475.7 bits (1223), Expect = 4.2e-133
Identity = 241/325 (74.15%), Postives = 271/325 (83.38%), Query Frame = 0

Query: 6   SYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCL 65
           SYFT DTYAN++SA+AARLAAGLCADLA++I +GR KNGFALVRPPGHHAGV+ AMGFCL
Sbjct: 229 SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCL 288

Query: 66  HNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTG 125
           HNNAAV+AL AQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTG
Sbjct: 289 HNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTG 348

Query: 126 AADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARG 185
           AADEVG+ G EGYCVNVPWS  GVGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARG
Sbjct: 349 AADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARG 408

Query: 186 DPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCD 245
           DPLG CDVTPAGY+ MT +L  + GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +
Sbjct: 409 DPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENE 468

Query: 246 LD-DRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVA 305
           L     PS AG++TVLDVL IQ  FWP L  S+SKL S+ E    E +K + KR+   V 
Sbjct: 469 LPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKKNQMKRKVVRV- 528

Query: 306 PRCWRWGRKRLLYHLLNGRLRVRSK 330
           P  W+WGRK+LLY+ L+ R+  RSK
Sbjct: 529 PTWWKWGRKKLLYNFLSARMISRSK 552

BLAST of MS000544 vs. ExPASy Swiss-Prot
Match: Q5A960 (Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=HDA1 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.3e-69
Identity = 131/268 (48.88%), Postives = 175/268 (65.30%), Query Frame = 0

Query: 13  YANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 72
           Y N  S  +A+L+ G   +    ++ GR KN  A+VRPPGHHA      GFCL +N AV+
Sbjct: 226 YVNNDSYLSAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVA 285

Query: 73  A---LAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGT--GAA 132
           A   L       ++++IVDWD+HHGNGTQ+ F  +  VLYISLHR E G+FYPGT  G  
Sbjct: 286 AKNMLKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDL 345

Query: 133 DEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGDP 192
           ++VG    EG+ +N+PW  SG+ D DY++AF +++ P+ S F PDL I+S+GFDAA GD 
Sbjct: 346 NQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDV 405

Query: 193 LGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLD 252
           +G C VTPAGY +MTH L  ++ GKL VILEGGYNL SIS SA AV KVL+GE P   + 
Sbjct: 406 IGACHVTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTIT 465

Query: 253 DRLPSRAGMKTVLDVLKIQKNFWPVLES 276
            R P    ++ V +V+KIQ  ++  L +
Sbjct: 466 LR-PQAEAIEVVDEVIKIQSKYFKSLRN 492

BLAST of MS000544 vs. ExPASy Swiss-Prot
Match: Q9Z2V5 (Histone deacetylase 6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 9.6e-69
Identity = 134/272 (49.26%), Postives = 177/272 (65.07%), Query Frame = 0

Query: 3   FYDSYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMG 62
           F   Y  P T+A       A+LA G    L   ++SG   NG A+VRPPGHHA    A G
Sbjct: 565 FDSIYICPSTFA------CAKLATGAACRLVEAVLSGEVLNGIAVVRPPGHHAEPNAACG 624

Query: 63  FCLHNNAAVSALAAQ--AAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRF 122
           FC  N+ AV+A  AQ  A  A ++LIVDWDVHHGNGTQ IFE + SVLY+SLHR++ G F
Sbjct: 625 FCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTF 684

Query: 123 YP--GTGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISA 182
           +P    GA+ +VG     G+ VNVPW+   +GD DY+ A+ ++VLPIA  F P+L +ISA
Sbjct: 685 FPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISA 744

Query: 183 GFDAARGDPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLL 242
           GFDAA+GDPLG C VTP GYAH+THLL  ++GG++++ILEGGYNL SIS S  A    LL
Sbjct: 745 GFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLL 804

Query: 243 GESPGCDLDDRLPSRAGMKTVLDVLKIQKNFW 271
           G+ P      R P    + ++ +V+++ + +W
Sbjct: 805 GDPPPQLTLLRPPQSGALVSISEVIQVHRKYW 830

BLAST of MS000544 vs. ExPASy Swiss-Prot
Match: P56523 (Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=clr3 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.4e-67
Identity = 135/263 (51.33%), Postives = 172/263 (65.40%), Query Frame = 0

Query: 13  YANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 72
           Y N  SA  ARLA G   +  + +V+G+ KN FA+VRPPGHHA   +  GFCL NN +V+
Sbjct: 154 YYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVT 213

Query: 73  A---LAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGT--GAA 132
           A   L       K+VLIVDWD+HHGNGTQ  F  + +VLY+SLHR+E GRFYPGT  G A
Sbjct: 214 ARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCA 273

Query: 133 DEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGDP 192
           +  G     G  VN+PWS +G+GD DYI+AF++VV+P+A  F PDL I+S GFDAA GD 
Sbjct: 274 ENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDH 333

Query: 193 LGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLD 252
           +G   +TPA YAHMT +L  ++ GK+ + LEGGYNL SIS+SA AV + LLG  PG  L 
Sbjct: 334 IGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPG-RLH 393

Query: 253 DRLPSRAGMKTVLDVLKIQKNFW 271
                   + T+  V KIQ  +W
Sbjct: 394 TTYACPQAVATINHVTKIQSQYW 415

BLAST of MS000544 vs. ExPASy Swiss-Prot
Match: Q613L4 (Histone deacetylase 4 OS=Caenorhabditis briggsae OX=6238 GN=hda-4 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-67
Identity = 130/288 (45.14%), Postives = 188/288 (65.28%), Query Frame = 0

Query: 11  DTYANKHSAQ-AARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNA 70
           DTY N  S Q AARLAAG   +L+S++  GR KNGFA +RPPGHHA  +QA+GFC  NN 
Sbjct: 584 DTYFNDASTQIAARLAAGTLIELSSQVAEGRLKNGFACIRPPGHHAEAEQALGFCFFNNV 643

Query: 71  AVSALAAQA---AGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 130
           AV+A   QA       K+ I+DWDVHHGNGTQ  F+ + +VLY+SLHRH+ G F+PGTG+
Sbjct: 644 AVTAKVLQAKYPVQCAKIAIIDWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGS 703

Query: 131 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARG- 190
             E+G    +G+ VN+P+S   + D +Y+ A++ VV P+ ++F PD  ++SAGFDA  G 
Sbjct: 704 VTEIGKGAGKGFSVNIPFSGGVMKDAEYLAAWRTVVEPVLASFCPDFILVSAGFDACHGH 763

Query: 191 -DPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGC 250
            + LG  ++TP  + +MT  L   + GK+++ LEGGYNL SIS++A   ++ L+GES   
Sbjct: 764 VNALGGYEITPEMFGYMTKCLLSYANGKVVLALEGGYNLDSISAAAEQCVQALIGESDDA 823

Query: 251 -----DLDDRLPSRAGMKTVLDVLKIQKNFWPVL---ESSFSKLQSQW 285
                D  + LP+++ ++T+  V+ I K FWP L   E++ +  + QW
Sbjct: 824 GRLCTDSLENLPNQSALETLQKVIAIHKGFWPALHGQEAAINTTEMQW 871

BLAST of MS000544 vs. ExPASy TrEMBL
Match: A0A6J1DG81 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.3e-187
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 276 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 335

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 336 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 395

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 396 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 455

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 456 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 515

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 516 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 575

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 576 CWRWGRKRLLYHLLNGRLRVRSKGC 600

BLAST of MS000544 vs. ExPASy TrEMBL
Match: A0A6J1DK09 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.3e-187
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 275 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 334

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 335 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 394

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 395 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 454

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 455 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 514

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 515 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 574

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 575 CWRWGRKRLLYHLLNGRLRVRSKGC 599

BLAST of MS000544 vs. ExPASy TrEMBL
Match: A0A6J1DIC7 (Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.3e-187
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 274 YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 333

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA
Sbjct: 334 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 393

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD
Sbjct: 394 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 453

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 454 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 513

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR
Sbjct: 514 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 573

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKGC 332
           CWRWGRKRLLYHLLNGRLRVRSKGC
Sbjct: 574 CWRWGRKRLLYHLLNGRLRVRSKGC 598

BLAST of MS000544 vs. ExPASy TrEMBL
Match: A0A0A0LXJ2 (Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_1G629170 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.7e-172
Identity = 307/334 (91.92%), Postives = 312/334 (93.41%), Query Frame = 0

Query: 1   FYFYDSYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQA 60
           F FYDSYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQA
Sbjct: 9   FIFYDSYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQA 68

Query: 61  MGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRF 120
           MGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE GRF
Sbjct: 69  MGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRF 128

Query: 121 YPGTGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGF 180
           YPGTGAADEVGTMGAEGYCVNVPWS+SGVGDNDYIFAFKQVVLPIASAF PDLTIISAGF
Sbjct: 129 YPGTGAADEVGTMGAEGYCVNVPWSRSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGF 188

Query: 181 DAARGDPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGE 240
           DAARGDPLGMCDVTP GYA MTHLLN VSGGKLLVILEGGYNLRSISSSATAVIKVLLGE
Sbjct: 189 DAARGDPLGMCDVTPTGYAQMTHLLNTVSGGKLLVILEGGYNLRSISSSATAVIKVLLGE 248

Query: 241 SPGCDLDDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERR---KPRKK 300
           SP CDLDD LPS AGMKTVLDVL IQKNFWPVLESSFSKLQS  E + TERR   KP K+
Sbjct: 249 SPECDLDDHLPSSAGMKTVLDVLAIQKNFWPVLESSFSKLQSMLEIFATERRGKVKPCKQ 308

Query: 301 RRHAAVAPRCWRWGRKRLLYHLLNGRLRVRSKGC 332
           RR A VAP CWRWGRKRLLYHLL G++RVRSKGC
Sbjct: 309 RRRAVVAPICWRWGRKRLLYHLLKGQIRVRSKGC 342

BLAST of MS000544 vs. ExPASy TrEMBL
Match: A0A6J1EET5 (Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.4e-171
Identity = 301/324 (92.90%), Postives = 307/324 (94.75%), Query Frame = 0

Query: 7   YFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLH 66
           YFTPDTYANKHSAQAARLAAGLCADLASE+ SGRAKNGFALVRPPGHHAGVKQAMGFCLH
Sbjct: 274 YFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLH 333

Query: 67  NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTGA 126
           NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE GRFYPGTGA
Sbjct: 334 NNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGA 393

Query: 127 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 186
           ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAF PDLTIISAGFDAARGD
Sbjct: 394 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGD 453

Query: 187 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 246
           PLGMCDVTPAGYA MT+LLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL
Sbjct: 454 PLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 513

Query: 247 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVAPR 306
           DD LPSRAGMKTVLDVL IQKNFWPVLESSFS+LQSQ+E Y T+RRKPRKKR    V P 
Sbjct: 514 DDPLPSRAGMKTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPL 573

Query: 307 CWRWGRKRLLYHLLNGRLRVRSKG 331
           CWRW RKRLLYHLL G+LRVR KG
Sbjct: 574 CWRWSRKRLLYHLLKGQLRVRGKG 597

BLAST of MS000544 vs. TAIR 10
Match: AT3G18520.1 (histone deacetylase 15 )

HSP 1 Score: 475.7 bits (1223), Expect = 3.0e-134
Identity = 241/325 (74.15%), Postives = 271/325 (83.38%), Query Frame = 0

Query: 6   SYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCL 65
           SYFT DTYAN++SA+AARLAAGLCADLA++I +GR KNGFALVRPPGHHAGV+ AMGFCL
Sbjct: 229 SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCL 288

Query: 66  HNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTG 125
           HNNAAV+AL AQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTG
Sbjct: 289 HNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTG 348

Query: 126 AADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARG 185
           AADEVG+ G EGYCVNVPWS  GVGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARG
Sbjct: 349 AADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARG 408

Query: 186 DPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCD 245
           DPLG CDVTPAGY+ MT +L  + GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +
Sbjct: 409 DPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENE 468

Query: 246 LD-DRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVA 305
           L     PS AG++TVLDVL IQ  FWP L  S+SKL S+ E    E +K + KR+   V 
Sbjct: 469 LPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKKNQMKRKVVRV- 528

Query: 306 PRCWRWGRKRLLYHLLNGRLRVRSK 330
           P  W+WGRK+LLY+ L+ R+  RSK
Sbjct: 529 PTWWKWGRKKLLYNFLSARMISRSK 552

BLAST of MS000544 vs. TAIR 10
Match: AT3G18520.2 (histone deacetylase 15 )

HSP 1 Score: 444.9 bits (1143), Expect = 5.7e-125
Identity = 227/318 (71.38%), Postives = 252/318 (79.25%), Query Frame = 0

Query: 6   SYFTPDTYANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCL 65
           SYFT DTYAN++SA+AARLAAGLCADLA++I +GR KNGFALVRPPGHHAGV+ AMGFCL
Sbjct: 229 SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCL 288

Query: 66  HNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPGTG 125
           HNNAAV+AL AQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTG
Sbjct: 289 HNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTG 348

Query: 126 AADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARG 185
           AADEVG+ G EGYCVNVPWS  GVGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARG
Sbjct: 349 AADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARG 408

Query: 186 DPLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCD 245
           DPLG CDVTPAGY+ MT +L  + GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +
Sbjct: 409 DPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENE 468

Query: 246 LD-DRLPSRAGMKTVLDVLKIQKNFWPVLESSFSKLQSQWETYDTERRKPRKKRRHAAVA 305
           L     PS AG++TVLDVL IQ  FWP L  S+SKL S+ E    E +  +   +     
Sbjct: 469 LPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEARLIENKSEKSDEKEGCSG 528

Query: 306 PRCWRWGRKRLLYHLLNG 323
                 G K     L  G
Sbjct: 529 SDMVEMGTKEAFVQLSLG 546

BLAST of MS000544 vs. TAIR 10
Match: AT5G61060.1 (histone deacetylase 5 )

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-62
Identity = 125/272 (45.96%), Postives = 165/272 (60.66%), Query Frame = 0

Query: 13  YANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 72
           Y N  S++AA LAAG    LA ++  G    GFA+VRPPGHHA   +AMGFCL NN AV+
Sbjct: 117 YLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVA 176

Query: 73  AL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPG--TGA 132
           A          G KK+LIVDWDVHHGNGTQ++F ++  VL+ S+HRHE G FYP    G 
Sbjct: 177 ASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGD 236

Query: 133 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 192
            + VG    EG+ +NVPW Q   GD DY+ A+  +++P+A  F PD+  +SAGFDAA  D
Sbjct: 237 YNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAIND 296

Query: 193 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 252
           PLG C VTP GY+ M   L   + GK+++ LEGGYNL SI+ S+ A ++VLL +      
Sbjct: 297 PLGGCCVTPYGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGP 356

Query: 253 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFS 279
            +  P  +  + +  V K    +WP L    S
Sbjct: 357 PEAYPFESTWRVIQAVRKRLCTYWPSLADELS 388

BLAST of MS000544 vs. TAIR 10
Match: AT5G61070.1 (histone deacetylase of the RPD3/HDA1 superfamily 18 )

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-61
Identity = 119/272 (43.75%), Postives = 166/272 (61.03%), Query Frame = 0

Query: 13  YANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 72
           Y N  S++AA LAAG    +A ++  G    GFA+VRPPGHHA   +AMGFCL NN AV+
Sbjct: 150 YLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVA 209

Query: 73  AL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYP--GTGA 132
           A            KK+LIVDWD+HHGNGTQ++F ++  VL  S+HRH+ G FYP    G 
Sbjct: 210 ASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGD 269

Query: 133 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 192
            + VG    EG+ +NVPW Q G GD DY+  +  +++P+   F PD+ ++SAGFDAA GD
Sbjct: 270 FNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGD 329

Query: 193 PLGMCDVTPAGYAHMTHLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDL 252
           PLG C VTP GY+ M   L   + GK+++ LEGGYNL S+  S+ A ++VLL +      
Sbjct: 330 PLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGS 389

Query: 253 DDRLPSRAGMKTVLDVLKIQKNFWPVLESSFS 279
            +  P  +  + +  V +    +WP L++S +
Sbjct: 390 SETYPLESTRRVIQAVRERLCTYWPSLDASMA 421

BLAST of MS000544 vs. TAIR 10
Match: AT5G61060.2 (histone deacetylase 5 )

HSP 1 Score: 233.8 bits (595), Expect = 2.0e-61
Identity = 124/276 (44.93%), Postives = 166/276 (60.14%), Query Frame = 0

Query: 13  YANKHSAQAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 72
           Y N  S++AA LAAG    LA ++  G    GFA+VRPPGHHA   +AMGFCL NN AV+
Sbjct: 117 YLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVA 176

Query: 73  AL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHELGRFYPG--TGA 132
           A          G KK+LIVDWDVHHGNGTQ++F ++  VL+ S+HRHE G FYP    G 
Sbjct: 177 ASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGD 236

Query: 133 ADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFTPDLTIISAGFDAARGD 192
            + VG    EG+ +NVPW Q   GD DY+ A+  +++P+A  F PD+  +SAGFDAA  D
Sbjct: 237 YNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAIND 296

Query: 193 PLGMCDVTPAGYAHMTHLLNI----VSGGKLLVILEGGYNLRSISSSATAVIKVLLGESP 252
           PLG C VTP GY+ M   + +     + GK+++ LEGGYNL SI+ S+ A ++VLL +  
Sbjct: 297 PLGGCCVTPYGYSVMLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQ 356

Query: 253 GCDLDDRLPSRAGMKTVLDVLKIQKNFWPVLESSFS 279
                +  P  +  + +  V K    +WP L    S
Sbjct: 357 IQGPPEAYPFESTWRVIQAVRKRLCTYWPSLADELS 392

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153231.11.1e-186100.00histone deacetylase 15 isoform X2 [Momordica charantia][more]
XP_022153232.11.1e-186100.00histone deacetylase 15 isoform X3 [Momordica charantia][more]
XP_022153227.11.1e-186100.00histone deacetylase 15 isoform X1 [Momordica charantia] >XP_022153228.1 histone ... [more]
KAG7022142.14.9e-17192.90Histone deacetylase 15 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022925326.14.9e-17192.90histone deacetylase 15 isoform X4 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q8GXJ14.2e-13374.15Histone deacetylase 15 OS=Arabidopsis thaliana OX=3702 GN=HDA15 PE=1 SV=2[more]
Q5A9603.3e-6948.88Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=... [more]
Q9Z2V59.6e-6949.26Histone deacetylase 6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3[more]
P565231.4e-6751.33Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ... [more]
Q613L42.4e-6745.14Histone deacetylase 4 OS=Caenorhabditis briggsae OX=6238 GN=hda-4 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1DG815.3e-187100.00Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1[more]
A0A6J1DK095.3e-187100.00Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1[more]
A0A6J1DIC75.3e-187100.00Histone deacetylase OS=Momordica charantia OX=3673 GN=LOC111020772 PE=4 SV=1[more]
A0A0A0LXJ21.7e-17291.92Histone deacetylase OS=Cucumis sativus OX=3659 GN=Csa_1G629170 PE=4 SV=1[more]
A0A6J1EET52.4e-17192.90Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G18520.13.0e-13474.15histone deacetylase 15 [more]
AT3G18520.25.7e-12571.38histone deacetylase 15 [more]
AT5G61060.11.4e-6245.96histone deacetylase 5 [more]
AT5G61070.11.5e-6143.75histone deacetylase of the RPD3/HDA1 superfamily 18 [more]
AT5G61060.22.0e-6144.93histone deacetylase 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase familyPRINTSPR01270HDASUPERcoord: 83..98
score: 61.3
coord: 171..181
score: 42.83
coord: 50..73
score: 41.27
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 10..236
e-value: 6.7E-80
score: 268.8
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20Histone deacetylase domaincoord: 4..277
e-value: 1.9E-116
score: 391.2
NoneNo IPR availablePANTHERPTHR45634HISTONE DEACETYLASEcoord: 5..328
NoneNo IPR availablePANTHERPTHR45634:SF11HISTONE DEACETYLASE-RELATEDcoord: 5..328
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 7..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS000544.1MS000544.1mRNA