Homology
BLAST of MS000508 vs. NCBI nr
Match:
XP_022141016.1 (RNA-binding KH domain-containing protein RCF3 [Momordica charantia])
HSP 1 Score: 1273.1 bits (3293), Expect = 0.0e+00
Identity = 653/656 (99.54%), Postives = 655/656 (99.85%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL
Sbjct: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS
Sbjct: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
NARGNDYSNRQSSFSIEPGAPPV+DNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL
Sbjct: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT
Sbjct: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR
Sbjct: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ
Sbjct: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
Query: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI
Sbjct: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
Query: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSE 657
TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS +
Sbjct: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQ 656
BLAST of MS000508 vs. NCBI nr
Match:
XP_038891418.1 (RNA-binding KH domain-containing protein RCF3 [Benincasa hispida])
HSP 1 Score: 1148.3 bits (2969), Expect = 0.0e+00
Identity = 596/661 (90.17%), Postives = 618/661 (93.49%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRY-NNHYANNNYRHRGSAARPSKPQDQSLMVTT 60
MEKSRSKRNYYYDHQDYDSE+MGRTRPRY NNHY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
Query: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
+P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG GRVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGVGRVATR 180
Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
LVVS+MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSKMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240
Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
AIAIVSSRLRESQHRDRSH HGRLHSPER FPPDDDYVP + RRL MDGR FR R
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVP---HNARRLPMDGRPFRPRM 300
Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
ASN RGNDYSNRQS+F +EPGA PVNDN+MPFYGEDLVFRILCPIDKVDSVIGES GII
Sbjct: 301 SASNTRGNDYSNRQSNFLVEPGAVPVNDNMMPFYGEDLVFRILCPIDKVDSVIGESNGII 360
Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
ELLRN+VGVDIKVSDPVTGSNERIL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNERILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDN 420
Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
+VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480
Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPPV----SLGLEESSSNNNVAAREVHSGIDPSS 540
AARDALVELTSRLR+YLYKEPFQKD SPPV SLGLEESSSNNN AREVHSG D SS
Sbjct: 481 AARDALVELTSRLRNYLYKEPFQKDASPPVSVQASLGLEESSSNNNAVAREVHSGNDSSS 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGTA LLKETGGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTAHLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 655
PAVPKLITKSKNKLAQISELSGANVTLVEDRPDV+QKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVSQKIIQISGTPEQAERAQSLLQGFIL 656
BLAST of MS000508 vs. NCBI nr
Match:
XP_022923031.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata] >KAG7014697.1 RNA-binding KH domain-containing protein RCF3 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1144.8 bits (2960), Expect = 0.0e+00
Identity = 591/663 (89.14%), Postives = 617/663 (93.06%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGSSRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
A+AIVSSRLRESQHR+RSH HGRLHSPER PPDDDYVP I+ RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
N RGNDYSNRQS+F +EPGA VNDN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPV-------SLGLEESSSNNNVAAREVHSGIDPSS 540
DA+VELTSRLR+YLYKEPFQKD SPPV SLGLEESSSNNN AAREVHSG D S
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGT QLLKE GGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 657
AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 658
BLAST of MS000508 vs. NCBI nr
Match:
KAG6576646.1 (RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1142.5 bits (2954), Expect = 0.0e+00
Identity = 590/663 (88.99%), Postives = 616/663 (92.91%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGSSRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
A+AIVSSRLRESQHR+RSH HGRLHSPER PPDDDYVP I+ RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
N RGNDYSNRQS+F +EPGA VNDN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+V
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVI 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPV-------SLGLEESSSNNNVAAREVHSGIDPSS 540
DA+VELTSRLR+YLYKEPFQKD SPPV SLGLEESSSNNN AAREVHSG D S
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGT QLLKE GGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 657
AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 658
BLAST of MS000508 vs. NCBI nr
Match:
XP_023552667.1 (RNA-binding KH domain-containing protein RCF3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 590/663 (88.99%), Postives = 616/663 (92.91%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGSSRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
A+AIVSSRLRESQHR+RSH HGRLHSPER PPDDDYVP I+ RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
N RGNDYSNRQS+F +EPGA VNDN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPV-------SLGLEESSSNNNVAAREVHSGIDPSS 540
DA+VELTSRLR+YLYKEP QKD SPPV SLGLEESSSNNN AAREVHSG D S
Sbjct: 481 DAVVELTSRLRNYLYKEPVQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGT QLLKE GGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 657
AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 658
BLAST of MS000508 vs. ExPASy Swiss-Prot
Match:
Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)
HSP 1 Score: 755.0 bits (1948), Expect = 7.2e-217
Identity = 424/677 (62.63%), Postives = 510/677 (75.33%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y NN YR G RPSK
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60
Query: 61 PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61 SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120
Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
D RRRDP+GR+P FSPAQEALF +HDRILES+ G+ G +E++DYGGVR
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180
Query: 181 GGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIV 240
GGGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIV
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV 240
Query: 241 QIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERGF-PPDDDYVPNISNTGRRL 300
QIVG+ NAVKNA+AIVSSRLRESQHRDRS+ GR HSPER F DDY+P + RR
Sbjct: 241 QIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQL----RRQ 300
Query: 301 SMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDS 360
S D R N R N++S+RQS+++ E A PV +NV Y E+LVF+ILCP DK+
Sbjct: 301 SSD----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVR 360
Query: 361 VIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHI 420
V+GES+GII+LL+NE+GVD++VSDPV GS+E+I+TISSEE PDD FPAQEALLHIQT I
Sbjct: 361 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 420
Query: 421 VDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADE 480
+DLIPDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG ++QI+ REE+P S D
Sbjct: 421 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDV 480
Query: 481 LIQIVGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLG-----------LEESSSN 540
+IQI G+I+AAR+ALVELT LRS+++KE QK+T PP S +E +SSN
Sbjct: 481 VIQITGEIRAAREALVELTLLLRSHMFKELSQKET-PPASTSTTGPLEGVAGVMEVASSN 540
Query: 541 NNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRI 600
N + +RE P+S+ Q KE GS +K E++ RE++P +R+
Sbjct: 541 NTIQSRE-----GPTSSNLNLQQVSTILPQFKEGFGS---VAKAGESEHREEVPVTTSRM 600
Query: 601 PVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGT 655
VPLVTRSTLEVV+PE VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGT
Sbjct: 601 AVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGT 646
BLAST of MS000508 vs. ExPASy Swiss-Prot
Match:
P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 8.4e-40
Identity = 178/663 (26.85%), Postives = 301/663 (45.40%), Query Frame = 0
Query: 20 EAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTTYRILCHDAKAGGVIGKSGS 79
E R + + NN +N N + R S + ++ + YRILC GGVIGKSG
Sbjct: 3 ERKKRKQIQRNNSESNRNQKRRISHDKINRDE------LVVYRILCPIDVVGGVIGKSGK 62
Query: 80 IIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPE------GRIPPFSPAQEALFLI 139
+I +IR +T A I V + G +R+I I + + E P AQ+AL +
Sbjct: 63 VINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKV 122
Query: 140 HDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRMHVGCLLGK 199
+D I+ SD N + +D+ RL+V L+GK
Sbjct: 123 YDAIVASDEE---NNTKTNVDRDDNK-----------------ECRLLVPFSQSSSLIGK 182
Query: 200 GGKIIEQMRMETKTQIRILPRDHNLPR--CISMSEEIVQIVGDANAVKNAIAIVSSRLRE 259
G+ I+++R T+ ++++ +D + P C + +V I G+ +VK A+ VS+ + +
Sbjct: 183 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 242
Query: 260 SQHRDRSHLHGRLHSPERGFPPDDDYVP-NISN-----TGRRLSMDGRTFRSRASNARGN 319
R+ L S + P VP ++SN TG + D + + N
Sbjct: 243 INPRENI----PLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFN 302
Query: 320 --DYSNRQSSFSIEPGAPPVNDNVMP----FYG----EDLVFRILCPIDKVDSVIGESEG 379
S+ Q PV + +P F G E+LVF++LCP+ + VIG+
Sbjct: 303 ALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGS 362
Query: 380 IIELLRNEVGVDIKVSDPVT--GSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIP 439
I+ +R G I+V+D T G +E ++ +++ E PDD A EA+L +Q +I D
Sbjct: 363 TIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND--E 422
Query: 440 DKDNVVTTRLLVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQI 499
D +N V +LLV S I C+ G+ GS++ E+++ T ANI I ++ D+L+++
Sbjct: 423 DAEN-VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEV 482
Query: 500 VGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPS 559
G++ + RDAL+++ RLR + LG ++S + AR +
Sbjct: 483 SGEVSSVRDALIQIVLRLREDV--------------LGDKDSVATRKPPARTDNCSFLSG 542
Query: 560 STAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIP 619
S+ P + + +G + +N P R+P + S LE++IP
Sbjct: 543 SSNAGYTLPSFMSSMASTSGFHGYGSFPAGDNVLGSTGPYSYGRLP----SSSALEILIP 602
Query: 620 EPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 656
A+ K++ K L I +SGA + + + I +SGT EQ A++L+Q F+
Sbjct: 603 AHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFV 606
BLAST of MS000508 vs. ExPASy Swiss-Prot
Match:
F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 1.0e-37
Identity = 192/826 (23.24%), Postives = 321/826 (38.86%), Query Frame = 0
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
+R+LC + G VIGKSG++IK ++Q TGA I V E G +R+I I + D + R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITI--IAQADSKSRV 108
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGA--------GGGGG 180
+ NG G + E++ GA
Sbjct: 109 --------------------KLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEAD 168
Query: 181 GGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIV 240
V RL+ H G ++GKGG+++ +R ET +I I R NLP C +E+V++
Sbjct: 169 SDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISI--RIENLPICADTDDEMVEVE 228
Query: 241 GDANAVKNAIAIVSS--------------------------------------------- 300
G+A AVK A+ +S
Sbjct: 229 GNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSVEV 288
Query: 301 -----RLRES-------------------------------------------------- 360
RLR
Sbjct: 289 NPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIEADRQDVLRRHVE 348
Query: 361 --------------------------------QHRDRSHLHGRLHSPERGFPPDDDYVPN 420
QHR+R H LH P P D +P
Sbjct: 349 ADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPF 408
Query: 421 IS----NTGRRL-SMDGRTFRSRASNARGNDYSNRQS---SFSIEPG-------APPVND 480
S GR + +M T R ++++ + YS + SF+ PP ++
Sbjct: 409 ESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPSE 468
Query: 481 NVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTIS 540
+ +D+VF+ILC + VIG ++ +L +E G I V + + ER++ ++
Sbjct: 469 --VEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVT 528
Query: 541 SEEGPDDELFPAQEALLHIQTHIVDLIPDK--DN----VVTTRLLVPSSDIVCLEGRDGS 600
+ E P+ + PAQ+A++ I + + +L +K DN +T RL+VP+S I C+ G+ G
Sbjct: 529 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 588
Query: 601 LL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLYKEP 658
++ EM++ TGA IQI+ E+ P +S D+++QI G+ R+A+ +TSRLR ++
Sbjct: 589 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNS 648
BLAST of MS000508 vs. ExPASy Swiss-Prot
Match:
Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 4.8e-19
Identity = 87/348 (25.00%), Postives = 153/348 (43.97%), Query Frame = 0
Query: 329 PFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEE 388
P + + VFR+L P KV S+IG +I+ + E IK+ D G+ ER + +S +E
Sbjct: 181 PGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKE 240
Query: 389 GPDDELFPAQEALLHIQTHIVDLIPDK------DNVVTTRLLVPSSDIVCLEGRDGSLLE 448
P+ L P+ + LL + IVD + + + V+TRLLVP+S L G+ G ++
Sbjct: 241 EPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300
Query: 449 -MKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLYKE---P 508
++ + ++++ E+LPVF D ++++VG+ + AL + S LR +L P
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIP 360
Query: 509 F----------QKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQP----FGT 568
F Q D PP + A G + Y P +
Sbjct: 361 FFENQMQKPTRQMDHMPPPH---QSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYP 420
Query: 569 AQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSK 628
+++ + R + ++ P + + T ++ IP +I S
Sbjct: 421 PPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSG 480
Query: 629 NKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFI 653
+ ++ LSGA VT+ E R + +++SGT Q + A L+Q F+
Sbjct: 481 SNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
BLAST of MS000508 vs. ExPASy Swiss-Prot
Match:
P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)
HSP 1 Score: 62.4 bits (150), Expect = 2.2e-08
Identity = 84/332 (25.30%), Postives = 139/332 (41.87%), Query Frame = 0
Query: 335 LVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDEL 394
L R+L +V S+IG+ ++ +R E G I +S+ ERI+TI+ GP D +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTIT---GPTDAI 105
Query: 395 FPAQEALLH-IQTHIVDLIPDKDNV----VTTRLLVPSSDIVCLEGRDGS-LLEMKRLTG 454
F A + + + I++ + + VT RL+VP+S L G+ GS + E++ TG
Sbjct: 106 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 165
Query: 455 ANIQI----VPRE-ELPVFVSGA-DELIQIVGDIKAARDALVELTSRLRSYLYKEPFQKD 514
A +Q+ +P E V +SG D +IQ V I +V L S + +
Sbjct: 166 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI-----CVVMLESPPKGATIPYRPKPA 225
Query: 515 TSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQN 574
++P + G + + A A Q Q G
Sbjct: 226 STPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSE 285
Query: 575 ENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVE 634
E SGL+ P ST E+ IP + +I + K+ +I ++SGA + +
Sbjct: 286 EAQNLMGQSSGLDASP----PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 345
Query: 635 DRPDVTQKIIQISGTPEQAERAQSLLQGFILS 655
+++ I I+GTP AQ L+ + S
Sbjct: 346 ATEGSSERQITITGTPANISLAQYLINARLTS 363
BLAST of MS000508 vs. ExPASy TrEMBL
Match:
A0A6J1CHR1 (RNA-binding KH domain-containing protein RCF3 OS=Momordica charantia OX=3673 GN=LOC111011523 PE=4 SV=1)
HSP 1 Score: 1273.1 bits (3293), Expect = 0.0e+00
Identity = 653/656 (99.54%), Postives = 655/656 (99.85%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL
Sbjct: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS
Sbjct: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
NARGNDYSNRQSSFSIEPGAPPV+DNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL
Sbjct: 301 NARGNDYSNRQSSFSIEPGAPPVSDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT
Sbjct: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR
Sbjct: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ
Sbjct: 481 DALVELTSRLRSYLYKEPFQKDTSPPVSLGLEESSSNNNVAAREVHSGIDPSSTAYQNVQ 540
Query: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI
Sbjct: 541 PFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 600
Query: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSSE 657
TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILS +
Sbjct: 601 TKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSMQ 656
BLAST of MS000508 vs. ExPASy TrEMBL
Match:
A0A6J1E5R0 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662 GN=LOC111430831 PE=4 SV=1)
HSP 1 Score: 1144.8 bits (2960), Expect = 0.0e+00
Identity = 591/663 (89.14%), Postives = 617/663 (93.06%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG RVATRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGSSRVATRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVG+ANAVK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGEANAVKK 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
A+AIVSSRLRESQHR+RSH HGRLHSPER PPDDDYVP I+ RRLSMDGR FR R S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPRIS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
N RGNDYSNRQS+F +EPGA VNDN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKDN+VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDNIVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPV-------SLGLEESSSNNNVAAREVHSGIDPSS 540
DA+VELTSRLR+YLYKEPFQKD SPPV SLGLEESSSNNN AAREVHSG D S
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSTMGSLGLEESSSNNNAAAREVHSGNDSSI 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGT QLLKE GGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTPQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 657
AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 658
BLAST of MS000508 vs. ExPASy TrEMBL
Match:
A0A6J1J8S6 (RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 GN=LOC111482777 PE=4 SV=1)
HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 589/663 (88.84%), Postives = 617/663 (93.06%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMVTTT 60
MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSA RP+KPQDQSLMVTTT
Sbjct: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAVRPTKPQDQSLMVTTT 60
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGRI 120
YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR+
Sbjct: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGRM 120
Query: 121 PPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRL 180
P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGGA GGG RV+TRL
Sbjct: 121 PSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGA--GGGSSRVSTRL 180
Query: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKN 240
VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKK 240
Query: 241 AIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRAS 300
A+AIVSSRLRESQHR+RSH HGRLHSPER PPDDDYVP I+ RRLSMDGR FR S
Sbjct: 241 AVAIVSSRLRESQHRNRSHFHGRLHSPERILPPDDDYVPPIA---RRLSMDGRPFRPHIS 300
Query: 301 NARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELL 360
N RGNDYSNRQS+F +EPGA VNDN+MPFYGEDLVFRILCPIDKVDSVIG+S+GIIELL
Sbjct: 301 NTRGNDYSNRQSNFLVEPGAASVNDNMMPFYGEDLVFRILCPIDKVDSVIGDSDGIIELL 360
Query: 361 RNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVT 420
R+EVGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDKD++VT
Sbjct: 361 RDEVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKDDIVT 420
Query: 421 TRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAAR 480
TRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPREELP+FVSGADEL+QI+GDIKAAR
Sbjct: 421 TRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREELPMFVSGADELVQIIGDIKAAR 480
Query: 481 DALVELTSRLRSYLYKEPFQKDTSPPV-------SLGLEESSSNNNVAAREVHSGIDPSS 540
DA+VELTSRLR+YLYKEPFQKD SPPV SLGLEESSSNNN +AREVHSG D S
Sbjct: 481 DAVVELTSRLRNYLYKEPFQKDASPPVSLPSSMGSLGLEESSSNNNASAREVHSGNDSSI 540
Query: 541 TAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
TAYQNVQPFGTAQLLKE GGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE
Sbjct: 541 TAYQNVQPFGTAQLLKENGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPE 600
Query: 601 PAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFIL 657
AVPKLITKSKNKLAQISELSGANVTLVEDRPD TQKIIQISGTPEQAERAQSLLQGFIL
Sbjct: 601 AAVPKLITKSKNKLAQISELSGANVTLVEDRPDETQKIIQISGTPEQAERAQSLLQGFIL 658
BLAST of MS000508 vs. ExPASy TrEMBL
Match:
A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)
HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 591/664 (89.01%), Postives = 619/664 (93.22%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRY-NNHYANNNYRHRGSAARPSKPQDQSLMVTT 60
MEKSRSKRNYYYDHQD+DSE+MGRTRPRY NNHY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1 MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
Query: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
+P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGG GGGG GGRVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG-GGGGCGGRVATR 180
Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240
Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
AIAIVSSRLRESQHRDRSH HGRLHSPER FPPDDDYVP + RRL MDGR FR R
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVP---HNARRLPMDGRPFRPRM 300
Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
ASN+RGNDYSNRQS+F +EPGA PVNDN+MPFYGEDLVFRILCPI+K+DSVIGES GII
Sbjct: 301 SASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGII 360
Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
ELLRN+VGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDK+N
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKEN 420
Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
+VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480
Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPP-------VSLGLEESSSNNNVAAREVHSGID 540
AARDALVELTSRLR+ LYKEPFQKD SP VSLGLEESSSNNN AAREVHSG D
Sbjct: 481 AARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGND 540
Query: 541 PSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
+STA+QNVQPFGTAQLLKETGGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVV
Sbjct: 541 SASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
Query: 601 IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 655
IPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQG
Sbjct: 601 IPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660
BLAST of MS000508 vs. ExPASy TrEMBL
Match:
A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)
HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 590/664 (88.86%), Postives = 618/664 (93.07%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRY-NNHYANNNYRHRGSAARPSKPQDQSLMVTT 60
MEKSRSKRNYYYDHQD+DSE+MGRTRPRY NNHY NNNYRHRG+A RPSKPQDQSLMVTT
Sbjct: 1 MEKSRSKRNYYYDHQDFDSESMGRTRPRYNNNHYPNNNYRHRGNAVRPSKPQDQSLMVTT 60
Query: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEISDTRRRDPEGR 120
TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHEL PGDEERIIEISDTRRRDPEGR
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
Query: 121 IPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATR 180
+P FSPAQEALFLIH+RILES+MSPGFNGMGYG EDE+DDYGGVRGG GG G GGRVATR
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG-GGSGCGGRVATR 180
Query: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVK 240
LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGD NAVK
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVK 240
Query: 241 NAIAIVSSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSR- 300
AIAIVSSRLRESQHRDRSH HGRLHSPER FPPDDDYVP + RRL MDGR FR R
Sbjct: 241 KAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPDDDYVP---HNARRLPMDGRPFRPRM 300
Query: 301 -ASNARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGII 360
ASN+RGNDYSNRQS+F +EPGA PVNDN+MPFYGEDLVFRILCPI+K+DSVIGES GII
Sbjct: 301 SASNSRGNDYSNRQSNFMVEPGAAPVNDNMMPFYGEDLVFRILCPIEKIDSVIGESNGII 360
Query: 361 ELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDN 420
ELLRN+VGVDIKVSDPVTGSNE+IL ISS+EGPDDELFPAQEALLHIQT IVDL+PDK+N
Sbjct: 361 ELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKEN 420
Query: 421 VVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADELIQIVGDIK 480
+VTTRLLVPSSDI CLEGRDGSLLEMKRLTGAN+ IVPRE+LP+FVSGADEL+QI+GDIK
Sbjct: 421 IVTTRLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIK 480
Query: 481 AARDALVELTSRLRSYLYKEPFQKDTSPP-------VSLGLEESSSNNNVAAREVHSGID 540
AARDALVELTSRLR+ LYKEPFQKD SP VSLGLEESSSNNN AAREVHSG D
Sbjct: 481 AARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGND 540
Query: 541 PSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
+STA+QNVQPFGTAQLLKETGGSSNET QNENDRREDLPSGLNRIPVPLVTRSTLEVV
Sbjct: 541 SASTAFQNVQPFGTAQLLKETGGSSNETGTQNENDRREDLPSGLNRIPVPLVTRSTLEVV 600
Query: 601 IPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 655
IPEPAVPKLITKSKNKLAQISELSGANV LVEDRPDVTQKIIQISGTPEQAERAQSLLQG
Sbjct: 601 IPEPAVPKLITKSKNKLAQISELSGANVMLVEDRPDVTQKIIQISGTPEQAERAQSLLQG 660
BLAST of MS000508 vs. TAIR 10
Match:
AT5G53060.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 755.0 bits (1948), Expect = 5.1e-218
Identity = 424/677 (62.63%), Postives = 510/677 (75.33%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y NN YR G RPSK
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60
Query: 61 PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61 SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120
Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
D RRRDP+GR+P FSPAQEALF +HDRILES+ G+ G +E++DYGGVR
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180
Query: 181 GGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIV 240
GGGRV TRLVVSRMHVGCLLGKGGKIIEQMR+ETKT IRILPR+ NLPRC+S+SEEIV
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIV 240
Query: 241 QIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERGF-PPDDDYVPNISNTGRRL 300
QIVG+ NAVKNA+AIVSSRLRESQHRDRS+ GR HSPER F DDY+P + RR
Sbjct: 241 QIVGELNAVKNALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQL----RRQ 300
Query: 301 SMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDS 360
S D R N R N++S+RQS+++ E A PV +NV Y E+LVF+ILCP DK+
Sbjct: 301 SSD----RFPRGNFRNNNFSSRQSNYAEEAPAVPVGENV---YSEELVFQILCPADKIVR 360
Query: 361 VIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHI 420
V+GES+GII+LL+NE+GVD++VSDPV GS+E+I+TISSEE PDD FPAQEALLHIQT I
Sbjct: 361 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 420
Query: 421 VDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLLEMKRLTGANIQIVPREELPVFVSGADE 480
+DLIPDKDN++TTRLLVPS D +CLEG+ GS+ E+ RLTG ++QI+ REE+P S D
Sbjct: 421 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSVSEISRLTGTSVQILAREEIPRCASINDV 480
Query: 481 LIQIVGDIKAARDALVELTSRLRSYLYKEPFQKDTSPPVSLG-----------LEESSSN 540
+IQI G+I+AAR+ALVELT LRS+++KE QK+T PP S +E +SSN
Sbjct: 481 VIQITGEIRAAREALVELTLLLRSHMFKELSQKET-PPASTSTTGPLEGVAGVMEVASSN 540
Query: 541 NNVAAREVHSGIDPSSTAYQNVQPFGTAQLLKETGGSSNETSKQNENDRREDLPSGLNRI 600
N + +RE P+S+ Q KE GS +K E++ RE++P +R+
Sbjct: 541 NTIQSRE-----GPTSSNLNLQQVSTILPQFKEGFGS---VAKAGESEHREEVPVTTSRM 600
Query: 601 PVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQKIIQISGT 655
VPLVTRSTLEVV+PE VPKL+TKS+NKLAQISE SGA+VT+VEDRP+ TQ II+ISGT
Sbjct: 601 AVPLVTRSTLEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGT 646
BLAST of MS000508 vs. TAIR 10
Match:
AT5G53060.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 246.1 bits (627), Expect = 7.7e-65
Identity = 135/202 (66.83%), Postives = 153/202 (75.74%), Query Frame = 0
Query: 1 MEKSRSKRNYYYDHQDYDSEAMGRTRPRYNNHY-------ANNNYRHRGSA----ARPSK 60
ME+SRSKRNY+YD QDYD ++M R++PRYNN+Y NN YR G RPSK
Sbjct: 1 MERSRSKRNYHYD-QDYDGDSMPRSKPRYNNNYHFGGGGGGNNRYRGGGGGGGGNGRPSK 60
Query: 61 PQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEIS 120
++ M TTTYRILCHDAKAGGVIGKSG+IIKSIRQHTGAWINVHEL PGD ERIIEIS
Sbjct: 61 SHPET-MATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 120
Query: 121 DTRRRDPEGRIPPFSPAQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGG 180
D RRRDP+GR+P FSPAQEALF +HDRILES+ G+ G +E++DYGGVR
Sbjct: 121 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGG---PPPEEEEDYGGVR----- 180
Query: 181 GGGGGRVATRLVVSRMHVGCLL 192
GGGRV TRLVVSRMHVGCLL
Sbjct: 181 -PGGGRVVTRLVVSRMHVGCLL 191
BLAST of MS000508 vs. TAIR 10
Match:
AT5G15270.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 223.4 bits (568), Expect = 5.4e-58
Identity = 164/493 (33.27%), Postives = 254/493 (51.52%), Query Frame = 0
Query: 13 DHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMV----TTTYRILCHDA 72
DH+D + R+RP+ ++Y G + R + D+ +V T +R LC
Sbjct: 10 DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69
Query: 73 KAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEI---SDTRRRDPEGRIPPFSP 132
K G VIG+ G I+K +R T + I + E PG +ER+I I SD +G SP
Sbjct: 70 KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129
Query: 133 AQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRM 192
AQ+ALF IHDR++ D A ED G +V +L+V
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSP-----------EGEKQVTAKLLVPSD 189
Query: 193 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIV 252
+GC+LG+GG+I++ +R ET QIRI+ +D N+P C S+E++QI G+ VK A+ +
Sbjct: 190 QIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQI 249
Query: 253 SSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGN 312
+SRL E+ R ++ L S G+P G +S G + G+
Sbjct: 250 ASRLHENPSRSQN-----LLSSSGGYP-----------AGSLMSHAGGPRLVGLAPLMGS 309
Query: 313 DYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVG 372
Y +S PP ND + R++ P++ + SVIG+ +I LR E
Sbjct: 310 -YGRDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETR 369
Query: 373 VDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVV--TTRL 432
IKV T N+ ++TIS+ E +D P EA++ +Q D + +V TTRL
Sbjct: 370 ATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRL 429
Query: 433 LVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDA 492
LVPSS I C+ G+ G+++ EM+R+T ANI+I+ +E LP S DE++QI G++ A++A
Sbjct: 430 LVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEA 447
Query: 493 LVELTSRLRSYLY 496
L+++TSRLR+ ++
Sbjct: 490 LIQITSRLRANVF 447
BLAST of MS000508 vs. TAIR 10
Match:
AT5G15270.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 223.4 bits (568), Expect = 5.4e-58
Identity = 164/493 (33.27%), Postives = 254/493 (51.52%), Query Frame = 0
Query: 13 DHQDYDSEAMGRTRPRYNNHYANNNYRHRGSAARPSKPQDQSLMV----TTTYRILCHDA 72
DH+D + R+RP+ ++Y G + R + D+ +V T +R LC
Sbjct: 10 DHRDSHRK---RSRPQ-------SDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVK 69
Query: 73 KAGGVIGKSGSIIKSIRQHTGAWINVHELAPGDEERIIEI---SDTRRRDPEGRIPPFSP 132
K G VIG+ G I+K +R T + I + E PG +ER+I I SD +G SP
Sbjct: 70 KIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGE-KVLSP 129
Query: 133 AQEALFLIHDRILESDMSPGFNGMGYGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRM 192
AQ+ALF IHDR++ D A ED G +V +L+V
Sbjct: 130 AQDALFRIHDRVVADD-----------ARSEDSP-----------EGEKQVTAKLLVPSD 189
Query: 193 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIV 252
+GC+LG+GG+I++ +R ET QIRI+ +D N+P C S+E++QI G+ VK A+ +
Sbjct: 190 QIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPLCALNSDELIQISGEVLIVKKALLQI 249
Query: 253 SSRLRESQHRDRSHLHGRLHSPERGFPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGN 312
+SRL E+ R ++ L S G+P G +S G + G+
Sbjct: 250 ASRLHENPSRSQN-----LLSSSGGYP-----------AGSLMSHAGGPRLVGLAPLMGS 309
Query: 313 DYSNRQSSFSIEPGAPPVNDNVMPFYGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVG 372
Y +S PP ND + R++ P++ + SVIG+ +I LR E
Sbjct: 310 -YGRDAGDWSRPLYQPPRNDPP----ATEFFIRLVSPVENIASVIGKGGALINQLRQETR 369
Query: 373 VDIKVSDPVTGSNERILTISSEEGPDDELFPAQEALLHIQTHIVDLIPDKDNVV--TTRL 432
IKV T N+ ++TIS+ E +D P EA++ +Q D + +V TTRL
Sbjct: 370 ATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRL 429
Query: 433 LVPSSDIVCLEGRDGSLL-EMKRLTGANIQIVPREELPVFVSGADELIQIVGDIKAARDA 492
LVPSS I C+ G+ G+++ EM+R+T ANI+I+ +E LP S DE++QI G++ A++A
Sbjct: 430 LVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEA 447
Query: 493 LVELTSRLRSYLY 496
L+++TSRLR+ ++
Sbjct: 490 LIQITSRLRANVF 447
BLAST of MS000508 vs. TAIR 10
Match:
AT1G51580.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 187.2 bits (474), Expect = 4.3e-47
Identity = 171/657 (26.03%), Postives = 294/657 (44.75%), Query Frame = 0
Query: 61 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHE--LAPGDEERIIEISDTRRRDPEG 120
+R+LC + G +IGK GS+I+ ++ TG+ I V + P +E ++ I+ + ++ E
Sbjct: 21 FRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDES 80
Query: 121 RI----------------------------PPFSPAQEALFLIHDRILESDMSPGFNGMG 180
+ S AQ AL + +RI+ D + +G
Sbjct: 81 NVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATVDG-- 140
Query: 181 YGAEDEDDDYGGVRGGAGGGGGGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIR 240
DE D G R++V V L+ KGGK+I+++R ++ +R
Sbjct: 141 ----DELDK------------GESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVR 200
Query: 241 ILPRDHNLPRCISMSEEIVQIVGDANAVKNAIAIVSSRLRESQHRDRSHLHGRLHSPERG 300
I D +P C + ++Q+ G ++VK A+ +V++ L+ES P+ G
Sbjct: 201 ISSTD-QIPPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQES---GAPPTWDECPFPQPG 260
Query: 301 FPPDDDYVPNISNTGRRLSMDGRTFRSRASNARGNDYSNRQSSFSIEPGAPPVNDNVMPF 360
+PP+ + S + + + P P+ ++V PF
Sbjct: 261 YPPE--------------------YHSMEYHPQWD-----------HPPPNPMPEDVGPF 320
Query: 361 ----YGEDLVFRILCPIDKVDSVIGESEGIIELLRNEVGVDIKVSDPVTGSNERILTISS 420
E++ FR+LCP DKV S+IG+ ++ L+NE G IKVSDP S ERI+ IS+
Sbjct: 321 NRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISA 380
Query: 421 EEGPDDELFPAQEALLHIQTHIVDLIPDKDNVVTTRLLVPSSDIVCLEGRDGSLL-EMKR 480
E + AQ+ ++ + IV++ + V RLLV S I L G+ G L+ EM+R
Sbjct: 381 RENLERRHSLAQDGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRR 440
Query: 481 LTGANIQIVPREELPVFVSGADELIQIVGDIKAARDALVELTSRLRSYLY--KEPFQKDT 540
TGA+I++ +++ + S DE++Q++G++K +DAL ++ RLR ++ + PFQ
Sbjct: 441 ATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMG 500
Query: 541 SPPVSLGLEESSSNNNVAARE-------VHSGIDPSSTAYQNVQPFG------------- 600
PP R+ HS + P + + F
Sbjct: 501 GPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSP 560
Query: 601 ---TAQLLKETGGSSNETSKQNENDRREDLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLI 658
T Q + N + P G P++T + +E+VIP+ + +
Sbjct: 561 MSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSEN---PVMTSANVEIVIPQAYLGHVY 620
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022141016.1 | 0.0e+00 | 99.54 | RNA-binding KH domain-containing protein RCF3 [Momordica charantia] | [more] |
XP_038891418.1 | 0.0e+00 | 90.17 | RNA-binding KH domain-containing protein RCF3 [Benincasa hispida] | [more] |
XP_022923031.1 | 0.0e+00 | 89.14 | RNA-binding KH domain-containing protein RCF3-like [Cucurbita moschata] >KAG7014... | [more] |
KAG6576646.1 | 0.0e+00 | 88.99 | RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma s... | [more] |
XP_023552667.1 | 0.0e+00 | 88.99 | RNA-binding KH domain-containing protein RCF3-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q8W4B1 | 7.2e-217 | 62.63 | RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
P58223 | 8.4e-40 | 26.85 | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... | [more] |
F4KDN0 | 1.0e-37 | 23.24 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... | [more] |
Q9SR13 | 4.8e-19 | 25.00 | Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... | [more] |
P57721 | 2.2e-08 | 25.30 | Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CHR1 | 0.0e+00 | 99.54 | RNA-binding KH domain-containing protein RCF3 OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1E5R0 | 0.0e+00 | 89.14 | RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita moschata OX=3662... | [more] |
A0A6J1J8S6 | 0.0e+00 | 88.84 | RNA-binding KH domain-containing protein RCF3-like OS=Cucurbita maxima OX=3661 G... | [more] |
A0A5D3CIV3 | 0.0e+00 | 89.01 | KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |
A0A5A7U3Y9 | 0.0e+00 | 88.86 | KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |