MS000491 (gene) Bitter gourd (TR) v1

Overview


Name	MS000491
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CCT domain-containing protein
Location	scaffold44: 2056130 .. 2059013 (-)
RNA-Seq Expression	MS000491
Synteny	MS000491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGCGGAGAATGGGGTTTTGTTTCCTCACTTTCAGAACTTCTCTCAGTTCCAACAACTTGAGGATTTCTGCAAAACCAACCTGCCGTGTTCTTCTCCAATGGTACTACTTCCCTCCATTTCTCTGTTTTCTCTTACTGCTCTTTCTGGGTTCATCTGGTCTGCATTTTCTTTGCACTGTTTGAGTTCATTTTAAGCTGATTTCCACAGAAATTTCTGTTTTGGATACTGGGTGTTCTTCCATTTTGAACTTTAGTATGAACATTTAATTCATCTGCTCTGCTTTCTGTTGAAATGGGATGAAGTGGAAAGGGAAGATACAAGCTTGTTGAAGTGTTTGTAATGAACGTGAGATAGTATAGTATGGGAACTGGGTTTCATTACTCAGGCAATTCTGTGTTGATTGGTTAATTATTTCAGTGCCCTGTTTGGTTAATGGGAAAAAATGAGGGGAAGTTTTGGTCGACATGTACTGTTTTAAGTCCTAAATGGTGCATGAGTGGGATGGGTGTGAAAACAAAGCCGATAAAGGAATTCTTTTGTCACTTTTTCATTTTGTAATGGCAATATGCTGTTTCTGCTTTACATGCTGGATGTCAAAAATATTGATAGAAATAGAAAGGAATATAATGGGCAGAACTCTTCTTTTCAGTCTTGGGGTTTCGTGTTCTACAGTCATTCTTCCATTTTTGTCTCATTCTAATCTGTAAACTACTTGCTAGAATGTTACTTTCTAGCCGCACTTGCTGCACTCCTACCGTTTGTGAAAAAGCTTCTAAGAGAATAAAATCTCCACCTCCATTTTTTTCAGTGACTTCTATTTGGAAGTAAAACTCTCTAGAGAAAGGAAAGGGAAAAAGGAAAAATTTTGCCCGAAAAGGTTGGTCTATATCCTCTTCTGCTAAAAGTGCGGAATCTGACTTCAGAAAAAGAAACTATGGATATCTTTGGACTCTTAAGAAGACTTCTCATAGCTAGTCGAAGGAGTCTATTTGTTTTTCCTATTGTTGGCCAAAAGACCTCTAAGTTCCAACTTCATTTTTGGTTCTTGTAGCTTTTATGCTCCCTTTTTCCTTTTACCTCAAAGGTTAACCGATATCATGCTTTCAAAATAGCATGGTTTCTGAATTAGAGAATTAAAACAATTTATCTTTATCTTTCCCTATAAAAATAAAGCAATAATCTTATCTTAAGCTTTTAACCTTTCATCAGAACATAAGTTTCTCCATATTACAGTCTAAATTGGGCACAGATTCAATCGATCTATACTTATTAAGCCTCATATCTTTAATATAATGCAGATACCCACAATTTGTGAATATGATATGGGTGGTGAAGGAGATCTCTTTGAAGCCCCACAACCATTTATTGAAGAACCTTTCATAGGTCTTAATCCTGTGATGGCAGGCATTTCAATGATATCTTGTGGTGAAGAAGTCATCTCTCCAGAAGGACTCAAAGTTTCAGACTTTGTGTCGCTTCAAAATGATCAACTGTTAAATGAGGTCTACTATGAGTGTGAAAAGGATCTTTTGGAAAAAGCTGCATTAGAAACACCACTGCCTCAAGTCCTGAACATCGAAATTCCAGTTCTGAACCCAGAAGAAACTCAAATTCCAGAAAACAAACCATTTCCTGATGTTTCAATCCAGAAAAGTACCAGCTCGGGGTGCTTAAGCTCGATGGATTTGATGCAAGGACCTACTATCAAACCAAGTTTTCTAGATTTTTCGGGCATGGATTTCAGTTCTGTTTTTGGGATGAGGAGGGCATTCAGTGATGGAGATATTAAGGTTAGACTTCTTACTGTTTTTTCCTTTTTAATTTTCCTGCATATGATTTAGATTTTGGCCGACATAACTAAATAAAAAATCACATTTGATGTTGATGATTGTAAAGGATGTTCATCATTTTACTGGAAGTACACATTGAAAATTTTGTAGTATGAAAAAAGTGGGTAATTAACTCAAATCTTTTCCCTAGTGACAACTTTTTATGAGTGCTCGAATGCTCGAAGAACGAGTCAGAGGCTTGATGGAAGGAAGGCCTGACATGTATATGCTAGCTATGGATTTCTGATTATTGAATGGTCTACCAAGAAGTAAATCTTAACATATCACGACCAGTATACTCAGAGAAACAATCTTCATACTCCATCTCTTCTGTGCTAAATAGTGTTAGTTATGGCCCATAACTTTCTGGCGCTCGCACCTGAGAATATCATGAAAATAAGCAATCAAGCAAGATGATTTGACGAAAATTTTAGCTGAAACCTTATTGTTTACTGTGGTTATTTTGGATATAGATAGTTCTGCTCCAAAGTCCTGATCCGGCACTATATCCTTGTATTAGTTTTCTGCTTTTCACTGATCTGTCTCCTTAAGTAAGCCATTTTTTTGCCTGCATAACATTCAAGAACAATGGTTAGTTGTTTCTGCCTTTGGACTTGGTAGATCTTTAATATGTGAATATTTTGACAGACACTCAGCAATGACAAAATAGGCATGATTCATTCTCCGCGGCCCTTGTTCAGCAATTGTACCAGCGAGGAACGCCGCGAAAAGCTTTCCCGCTACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGAAAAATCAAGGTAAAGAAAGAGAAAACTTTGCTTCAATTGAAATCATGAAAAACTTGTCAATAAATTACCCTGTGAGGCATGTAATACACATATATGTGCACCCACTGTTTTTAAACTTTATGAATTCTTCTTCACAAATTGATTATATGCTCTGGTTTTCAGTATGCTTGCAGGAAGGCTCTTGCAGACAATCAACCTAGAATCCGTGGAAGGTTTGCGAAGACCGATGAATCTGAAGTGAAGGGCAGTAGCTCAATCTCAATGCTTGTTCTA

mRNA sequence

ATGTTTGCGGAGAATGGGGTTTTGTTTCCTCACTTTCAGAACTTCTCTCAGTTCCAACAACTTGAGGATTTCTGCAAAACCAACCTGCCGTGTTCTTCTCCAATGATACCCACAATTTGTGAATATGATATGGGTGGTGAAGGAGATCTCTTTGAAGCCCCACAACCATTTATTGAAGAACCTTTCATAGGTCTTAATCCTGTGATGGCAGGCATTTCAATGATATCTTGTGGTGAAGAAGTCATCTCTCCAGAAGGACTCAAAGTTTCAGACTTTGTGTCGCTTCAAAATGATCAACTGTTAAATGAGGTCTACTATGAGTGTGAAAAGGATCTTTTGGAAAAAGCTGCATTAGAAACACCACTGCCTCAAGTCCTGAACATCGAAATTCCAGTTCTGAACCCAGAAGAAACTCAAATTCCAGAAAACAAACCATTTCCTGATGTTTCAATCCAGAAAAGTACCAGCTCGGGGTGCTTAAGCTCGATGGATTTGATGCAAGGACCTACTATCAAACCAAGTTTTCTAGATTTTTCGGGCATGGATTTCAGTTCTGTTTTTGGGATGAGGAGGGCATTCAGTGATGGAGATATTAAGACACTCAGCAATGACAAAATAGGCATGATTCATTCTCCGCGGCCCTTGTTCAGCAATTGTACCAGCGAGGAACGCCGCGAAAAGCTTTCCCGCTACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGAAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCAGACAATCAACCTAGAATCCGTGGAAGGTTTGCGAAGACCGATGAATCTGAAGTGAAGGGCAGTAGCTCAATCTCAATGCTTGTTCTA

Coding sequence (CDS)

ATGTTTGCGGAGAATGGGGTTTTGTTTCCTCACTTTCAGAACTTCTCTCAGTTCCAACAACTTGAGGATTTCTGCAAAACCAACCTGCCGTGTTCTTCTCCAATGATACCCACAATTTGTGAATATGATATGGGTGGTGAAGGAGATCTCTTTGAAGCCCCACAACCATTTATTGAAGAACCTTTCATAGGTCTTAATCCTGTGATGGCAGGCATTTCAATGATATCTTGTGGTGAAGAAGTCATCTCTCCAGAAGGACTCAAAGTTTCAGACTTTGTGTCGCTTCAAAATGATCAACTGTTAAATGAGGTCTACTATGAGTGTGAAAAGGATCTTTTGGAAAAAGCTGCATTAGAAACACCACTGCCTCAAGTCCTGAACATCGAAATTCCAGTTCTGAACCCAGAAGAAACTCAAATTCCAGAAAACAAACCATTTCCTGATGTTTCAATCCAGAAAAGTACCAGCTCGGGGTGCTTAAGCTCGATGGATTTGATGCAAGGACCTACTATCAAACCAAGTTTTCTAGATTTTTCGGGCATGGATTTCAGTTCTGTTTTTGGGATGAGGAGGGCATTCAGTGATGGAGATATTAAGACACTCAGCAATGACAAAATAGGCATGATTCATTCTCCGCGGCCCTTGTTCAGCAATTGTACCAGCGAGGAACGCCGCGAAAAGCTTTCCCGCTACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGAAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCAGACAATCAACCTAGAATCCGTGGAAGGTTTGCGAAGACCGATGAATCTGAAGTGAAGGGCAGTAGCTCAATCTCAATGCTTGTTCTA

Protein sequence

MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL

Homology

[Close]

BLAST of MS000491 vs. NCBI nr
Match: XP_022140810.1 (zinc finger protein CONSTANS-LIKE 1-like [Momordica charantia])

HSP 1 Score: 565.5 bits (1456), Expect = 2.6e-157
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE 60
           MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE
Sbjct: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE 60

Query: 61  PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET 120
           PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET
Sbjct: 61  PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET 120

Query: 121 PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG 180
           PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG
Sbjct: 121 PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG 180

Query: 181 MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF 240
           MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF
Sbjct: 181 MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF 240

Query: 241 GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 282

[Close]

BLAST of MS000491 vs. NCBI nr
Match: KAG6576657.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014707.1 Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 493.4 bits (1269), Expect = 1.3e-135
Identity = 247/286 (86.36%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLE+FCKT  PCSSPMIPTICEYDMGGEGDLFEA  PQPF+
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEEFCKTQQPCSSPMIPTICEYDMGGEGDLFEAPQPQPFV 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           EE F+GL+PVMA ISMISC EEVISPEGL+V+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  EETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP VLNIEIPVLNP++ QIPENKPFPD SIQKS+SSGCL+SMDL QGPTIKP F+DF
Sbjct: 121 ERPLPDVLNIEIPVLNPKDNQIPENKPFPDASIQKSSSSGCLNSMDLAQGPTIKPCFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
             MDFSSV+GMRRAFS+GDIKTL +DKIGMIHSP  RP+FSNCTSEER EKLSRYRNK+T
Sbjct: 181 PDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNCTSEERLEKLSRYRNKRT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKGSSSISMLVL 286

[Close]

BLAST of MS000491 vs. NCBI nr
Match: XP_022923117.1 (uncharacterized protein LOC111430881 isoform X1 [Cucurbita moschata] >XP_022923118.1 uncharacterized protein LOC111430881 isoform X2 [Cucurbita moschata])

HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132
Identity = 243/286 (84.97%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGV FPHFQNFSQ QQLE+FCKT  PCSSPMI TICEYDMGGEGDLFEA  PQPF+
Sbjct: 1   MFADNGVFFPHFQNFSQVQQLEEFCKTQQPCSSPMISTICEYDMGGEGDLFEAPQPQPFV 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           EE F+GL+PVMA ISMISC EEVISPEGL+V+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  EETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP VLNIEIPVLNPE+ QIPENK FPD SIQKS+S GCL+SMDL+QGPTIKP F+DF
Sbjct: 121 ERPLPDVLNIEIPVLNPEDNQIPENKSFPDASIQKSSSLGCLNSMDLVQGPTIKPCFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
             MDFSSV+GMRRAFS+GDIKTL +DKIGMIHSP  RP+FSNCTSEER EKLSRYR K+T
Sbjct: 181 PDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNCTSEERLEKLSRYRTKRT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKGSSSISMLVL 286

[Close]

BLAST of MS000491 vs. NCBI nr
Match: XP_023553012.1 (uncharacterized protein LOC111810531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.6 bits (1241), Expect = 2.3e-132
Identity = 243/286 (84.97%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLE+FCKT  PCSSPMI TICEYDMGGEGDLFEA  PQPF+
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEEFCKTQQPCSSPMISTICEYDMGGEGDLFEAPQPQPFV 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           EE F+GL+PVMA ISMISC EEVISPEGL+V+DF SLQNDQLLNEVYYECE DLLEKAAL
Sbjct: 61  EETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLLNEVYYECEMDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP VLNIEIPVLNPE+  IPENKPFPD SIQKS+S GCL+SMDL+QGPTIKP F+DF
Sbjct: 121 ERPLPDVLNIEIPVLNPEDNPIPENKPFPDASIQKSSSFGCLNSMDLVQGPTIKPCFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
             MDFSSV+GMRRAFS+GDIKTL +DKIGMIHSP  RP+FSNCTSEER EKLSRYRNK+T
Sbjct: 181 PDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNCTSEERLEKLSRYRNKRT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+Q RIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQSRIRGRFAKTDESEVKGSSSISMLVL 286

[Close]

BLAST of MS000491 vs. NCBI nr
Match: XP_008466816.1 (PREDICTED: uncharacterized protein LOC103504133 [Cucumis melo])

HSP 1 Score: 479.6 bits (1233), Expect = 1.9e-131
Identity = 245/286 (85.66%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLE+FCKT+ PCSS  I +ICEYDM GEGDLFEA  PQP+I
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEEFCKTHQPCSSSTISSICEYDMVGEGDLFEAPQPQPYI 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           +E FIGL+PVMA ISMISC EEVISPEGLKV+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  DETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP+ LNIEIPVLNPEE QIPENKPF D SIQKSTS  CLSSMDLMQGPTIKPSF+DF
Sbjct: 121 ERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLSSMDLMQGPTIKPSFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
           S MDFSSV+GMRRAFS+GDIKTL +DK+GMIHSP  RP+FSNCTSEER EKLSRYRNKKT
Sbjct: 181 SDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNCTSEERLEKLSRYRNKKT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVK SSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKSSSSISMLVL 286

[Close]

BLAST of MS000491 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-06
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 212 PRPLFSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESEV 271
           P  +    T  ER  ++ RYR KK  R F + I+YA RKA A+ +PRI+GRFAK  E+E 
Sbjct: 266 PTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEA 325

Query: 272 KGSSSIS 279
           +     S
Sbjct: 326 EAEEIFS 332

[Close]

BLAST of MS000491 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 220 TSEERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAK-TDESE 271
           TS ER  ++ RYR K+  R F + I+YA RKA A+ +PRI+GRFAK TD +E
Sbjct: 291 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 342

[Close]

BLAST of MS000491 vs. ExPASy Swiss-Prot
Match: Q9LJ44 (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 207 GMIHSPRPLFSN---CTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRF 266
           G I S  P  +N      + R E   RY+ KK KR+FG++I+YA RKA AD + R++GRF
Sbjct: 287 GFIMSEAPWETNFEVSCPQARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRF 346

Query: 267 AKTDES 270
            K  +S
Sbjct: 347 VKAGDS 352

[Close]

BLAST of MS000491 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 220 TSEERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESE 271
           +S +R  ++ RYR K+  R F + I+YA RKA A+++PRI+GRFAK  E+E
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETE 331

[Close]

BLAST of MS000491 vs. ExPASy Swiss-Prot
Match: E5RQA1 (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-05
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 223 ERREKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESE 271
           ER  KL RY+ K+ KR + ++I+YA RKA A+ +PR+RGRFAK  + E
Sbjct: 189 EREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPDQE 236

[Close]

BLAST of MS000491 vs. ExPASy TrEMBL
Match: A0A6J1CG74 (zinc finger protein CONSTANS-LIKE 1-like OS=Momordica charantia OX=3673 GN=LOC111011390 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.3e-157
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE 60
           MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE
Sbjct: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEAPQPFIEE 60

Query: 61  PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET 120
           PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET
Sbjct: 61  PFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAALET 120

Query: 121 PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG 180
           PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG
Sbjct: 121 PLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSG 180

Query: 181 MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF 240
           MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF
Sbjct: 181 MDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRPLFSNCTSEERREKLSRYRNKKTKRNF 240

Query: 241 GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 GRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 282

[Close]

BLAST of MS000491 vs. ExPASy TrEMBL
Match: A0A6J1E5A1 (uncharacterized protein LOC111430881 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430881 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.4e-133
Identity = 243/286 (84.97%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGV FPHFQNFSQ QQLE+FCKT  PCSSPMI TICEYDMGGEGDLFEA  PQPF+
Sbjct: 1   MFADNGVFFPHFQNFSQVQQLEEFCKTQQPCSSPMISTICEYDMGGEGDLFEAPQPQPFV 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           EE F+GL+PVMA ISMISC EEVISPEGL+V+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  EETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP VLNIEIPVLNPE+ QIPENK FPD SIQKS+S GCL+SMDL+QGPTIKP F+DF
Sbjct: 121 ERPLPDVLNIEIPVLNPEDNQIPENKSFPDASIQKSSSLGCLNSMDLVQGPTIKPCFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
             MDFSSV+GMRRAFS+GDIKTL +DKIGMIHSP  RP+FSNCTSEER EKLSRYR K+T
Sbjct: 181 PDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNCTSEERLEKLSRYRTKRT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKGSSSISMLVL 286

[Close]

BLAST of MS000491 vs. ExPASy TrEMBL
Match: A0A1S3CS26 (uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 9.2e-132
Identity = 245/286 (85.66%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLE+FCKT+ PCSS  I +ICEYDM GEGDLFEA  PQP+I
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEEFCKTHQPCSSSTISSICEYDMVGEGDLFEAPQPQPYI 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           +E FIGL+PVMA ISMISC EEVISPEGLKV+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  DETFIGLDPVMAAISMISCAEEVISPEGLKVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP+ LNIEIPVLNPEE QIPENKPF D SIQKSTS  CLSSMDLMQGPTIKPSF+DF
Sbjct: 121 ERPLPEDLNIEIPVLNPEENQIPENKPFLDASIQKSTSLECLSSMDLMQGPTIKPSFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
           S MDFSSV+GMRRAFS+GDIKTL +DK+GMIHSP  RP+FSNCTSEER EKLSRYRNKKT
Sbjct: 181 SDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPVFSNCTSEERLEKLSRYRNKKT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVK SSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKSSSSISMLVL 286

[Close]

BLAST of MS000491 vs. ExPASy TrEMBL
Match: A0A6J1J936 (uncharacterized protein LOC111482856 OS=Cucurbita maxima OX=3661 GN=LOC111482856 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.6e-131
Identity = 242/286 (84.62%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLE+FCKT  PCSSPMI TICEYDMGGEGDLFEA  PQPF 
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEEFCKTQQPCSSPMISTICEYDMGGEGDLFEAPQPQPFD 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           EE F+GL+PVMA ISMISC EEVISPEGL+V+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  EETFMGLDPVMAAISMISCAEEVISPEGLEVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP VLNIEIPVLNPE+ Q PENK FPD SIQKS+S GCL+SMDL+QG TI+P F+DF
Sbjct: 121 ERPLPDVLNIEIPVLNPEDNQSPENKAFPDASIQKSSSLGCLNSMDLVQGSTIRPCFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
             MDFSSV+GMRRAFS+GDIKTL +DKIGMIHSP  RP+FSNCTSEER EKLSRYRNK+T
Sbjct: 181 QDMDFSSVYGMRRAFSEGDIKTLGSDKIGMIHSPLHRPVFSNCTSEERLEKLSRYRNKRT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVKGSSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKGSSSISMLVL 286

[Close]

BLAST of MS000491 vs. ExPASy TrEMBL
Match: A0A0A0LC99 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G247880 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 8.9e-127
Identity = 238/286 (83.22%), Postives = 256/286 (89.51%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFSQFQQLEDFCKTNLPCSSPMIPTICEYDMGGEGDLFEA--PQPFI 60
           MFA+NGVLFPHFQNFSQ QQLEDFCKT+  CSS  I +ICEYDM GEGDLFEA  PQP+I
Sbjct: 1   MFADNGVLFPHFQNFSQVQQLEDFCKTHQSCSSSTISSICEYDMVGEGDLFEAPQPQPYI 60

Query: 61  EEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQNDQLLNEVYYECEKDLLEKAAL 120
           +E FIGL+PVMA ISMISC +EVISPEGLKV+DF SLQNDQLLNEVYYECEKDLLEKAAL
Sbjct: 61  DETFIGLDPVMAAISMISCADEVISPEGLKVADFQSLQNDQLLNEVYYECEKDLLEKAAL 120

Query: 121 ETPLPQVLNIEIPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDF 180
           E PLP+ LNIEIPVLNP+E QI ENKPF + SIQKSTS  CLSSMDLMQGPTIKPSF+DF
Sbjct: 121 ERPLPEDLNIEIPVLNPDENQISENKPFLEASIQKSTSLECLSSMDLMQGPTIKPSFIDF 180

Query: 181 SGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSP--RPLFSNCTSEERREKLSRYRNKKT 240
           S MDFSSV+GMRRAFS+GDIKTL +DK+GMIHSP  RP+F N TS ER EKLSRYRNKKT
Sbjct: 181 SDMDFSSVYGMRRAFSEGDIKTLGSDKLGMIHSPLHRPMFGNFTSGERLEKLSRYRNKKT 240

Query: 241 KRNFGRKIKYACRKALADNQPRIRGRFAKTDESEVKGSSSISMLVL 283
           KRNFGRKIKYACRKALAD+QPRIRGRFAKTDESEVK SSSISMLVL
Sbjct: 241 KRNFGRKIKYACRKALADSQPRIRGRFAKTDESEVKSSSSISMLVL 286

[Close]

BLAST of MS000491 vs. TAIR 10
Match: AT5G53420.1 (CCT motif family protein )

HSP 1 Score: 212.2 bits (539), Expect = 5.3e-55
Identity = 134/279 (48.03%), Postives = 183/279 (65.59%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNF-SQFQQLEDFCKTNLPCSSPMIPT------ICEYDMGGEGDLFEA 60
           M+ ++G++  + QN     QQ ED  K +   S  M  T      I EYD+G E DLF A
Sbjct: 1   MYQDSGLMLRYMQNCPPDIQQFEDLFK-SYKLSDEMNNTFVESSNISEYDIGEESDLFRA 60

Query: 61  PQPFIEEPFIGLNPVMAGISMISCGEEVISPEGL-KVSDFVSLQN-DQLLNEVYYECEKD 120
           P P +EEP + ++P+ A ++MISCGE+  + +GL ++ D  SLQ+  QLL++ +YECE+D
Sbjct: 61  PDPILEEPILTVDPLSAALTMISCGED--TSQGLCELPDLGSLQSGQQLLDKAFYECEQD 120

Query: 121 LLEKAALETPLPQVLNIE-IPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPT 180
           L+ K+A+E+P   VL+I+ I V+    T I EN+      +QKS SSG LSSMD      
Sbjct: 121 LMMKSAMESPFSDVLDIKNISVV----TTINENQ-----DMQKSVSSGNLSSMDWSHAQQ 180

Query: 181 IKPSFLDFSGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRP-LFSNCTSEERREKLS 240
                 +F   DF   +GMRRAFS+GDI+ L     G++ SP   +  +CTSE+RREKLS
Sbjct: 181 ETVMIQNFPDFDFG--YGMRRAFSEGDIQKLG---AGLVQSPLDRIIVSCTSEDRREKLS 240

Query: 241 RYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDE 269
           RY+NKK++RNFGRKIKYACRKALAD+QPR+RGRFAKT+E
Sbjct: 241 RYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262

[Close]

BLAST of MS000491 vs. TAIR 10
Match: AT4G27900.1 (CCT motif family protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-52
Identity = 127/278 (45.68%), Postives = 176/278 (63.31%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFS--QFQQLEDFCKT-NLPCSSPMIPTICEYDMGGEGDLFEAPQPF 60
           M+AE  + F   Q+ S  +  Q ED  K+  L      +    EYD G E DLF+AP+P 
Sbjct: 1   MYAETSLAFRFMQSSSSPEIHQFEDLFKSYKLSDEMNNLVEASEYDFGEESDLFKAPEPI 60

Query: 61  IEEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQND-QLLNEVYYECEKDLLEKA 120
           IEEP + ++P              +S E +++ D  SLQ+D QL+++ +Y+CE+DLL K+
Sbjct: 61  IEEPMLAVDP--------------LSQELVELGDLGSLQSDQQLIDKAFYDCEQDLLVKS 120

Query: 121 ALETPLPQVLNIE-IPVLNPEETQIPENK-PFPDVSIQKSTSSGCLSSMDLMQ-GPTIKP 180
           A+E+PL +VL+I+ I ++   +  +        DV I KS SSG LSSMD+++    +  
Sbjct: 121 AMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAVIQ 180

Query: 181 SFLDFSGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRP-LFSNCTSEERREKLSRYR 240
            F DF  +D    +GMRRAFS+ DI+TL     G++ S    +  +CTSE+RREKLSRYR
Sbjct: 181 GFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIISCTSEDRREKLSRYR 240

Query: 241 NKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESE 271
           NKK+KRNFGRKIKYACRKALAD+QPRIRGRFAKT+E +
Sbjct: 241 NKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260

[Close]

BLAST of MS000491 vs. TAIR 10
Match: AT4G27900.2 (CCT motif family protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-52
Identity = 127/278 (45.68%), Postives = 176/278 (63.31%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNFS--QFQQLEDFCKT-NLPCSSPMIPTICEYDMGGEGDLFEAPQPF 60
           M+AE  + F   Q+ S  +  Q ED  K+  L      +    EYD G E DLF+AP+P 
Sbjct: 1   MYAETSLAFRFMQSSSSPEIHQFEDLFKSYKLSDEMNNLVEASEYDFGEESDLFKAPEPI 60

Query: 61  IEEPFIGLNPVMAGISMISCGEEVISPEGLKVSDFVSLQND-QLLNEVYYECEKDLLEKA 120
           IEEP + ++P              +S E +++ D  SLQ+D QL+++ +Y+CE+DLL K+
Sbjct: 61  IEEPMLAVDP--------------LSQELVELGDLGSLQSDQQLIDKAFYDCEQDLLVKS 120

Query: 121 ALETPLPQVLNIE-IPVLNPEETQIPENK-PFPDVSIQKSTSSGCLSSMDLMQ-GPTIKP 180
           A+E+PL +VL+I+ I ++   +  +        DV I KS SSG LSSMD+++    +  
Sbjct: 121 AMESPLSEVLDIKNISLVAKMDNDVKSTSVVVSDVPIPKSVSSGNLSSMDMVEHKDAVIQ 180

Query: 181 SFLDFSGMDFSSVFGMRRAFSDGDIKTLSNDKIGMIHSPRP-LFSNCTSEERREKLSRYR 240
            F DF  +D    +GMRRAFS+ DI+TL     G++ S    +  +CTSE+RREKLSRYR
Sbjct: 181 GFPDFPPVD----YGMRRAFSESDIQTLGTGNTGLVQSQLDRIIISCTSEDRREKLSRYR 240

Query: 241 NKKTKRNFGRKIKYACRKALADNQPRIRGRFAKTDESE 271
           NKK+KRNFGRKIKYACRKALAD+QPRIRGRFAKT+E +
Sbjct: 241 NKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEMQ 260

[Close]

BLAST of MS000491 vs. TAIR 10
Match: AT5G53420.2 (CCT motif family protein )

HSP 1 Score: 165.6 bits (418), Expect = 5.7e-41
Identity = 105/199 (52.76%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 74  MISCGEEVISPEGL-KVSDFVSLQN-DQLLNEVYYECEKDLLEKAALETPLPQVLNIE-I 133
           MISCGE+  + +GL ++ D  SLQ+  QLL++ +YECE+DL+ K+A+E+P   VL+I+ I
Sbjct: 1   MISCGED--TSQGLCELPDLGSLQSGQQLLDKAFYECEQDLMMKSAMESPFSDVLDIKNI 60

Query: 134 PVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPTIKPSFLDFSGMDFSSVFGMR 193
            V+    T I EN+      +QKS SSG LSSMD            +F   DF   +GMR
Sbjct: 61  SVV----TTINENQ-----DMQKSVSSGNLSSMDWSHAQQETVMIQNFPDFDFG--YGMR 120

Query: 194 RAFSDGDIKTLSNDKIGMIHSPRP-LFSNCTSEERREKLSRYRNKKTKRNFGRKIKYACR 253
           RAFS+GDI+ L     G++ SP   +  +CTSE+RREKLSRY+NKK++RNFGRKIKYACR
Sbjct: 121 RAFSEGDIQKLG---AGLVQSPLDRIIVSCTSEDRREKLSRYKNKKSRRNFGRKIKYACR 180

Query: 254 KALADNQPRIRGRFAKTDE 269
           KALAD+QPR+RGRFAKT+E
Sbjct: 181 KALADSQPRVRGRFAKTEE 183

[Close]

BLAST of MS000491 vs. TAIR 10
Match: AT5G53420.3 (CCT motif family protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 88/213 (41.31%), Postives = 126/213 (59.15%), Query Frame = 0


Query: 1   MFAENGVLFPHFQNF-SQFQQLEDFCKTNLPCSSPMIPT------ICEYDMGGEGDLFEA 60
           M+ ++G++  + QN     QQ ED  K +   S  M  T      I EYD+G E DLF A
Sbjct: 1   MYQDSGLMLRYMQNCPPDIQQFEDLFK-SYKLSDEMNNTFVESSNISEYDIGEESDLFRA 60

Query: 61  PQPFIEEPFIGLNPVMAGISMISCGEEVISPEGL-KVSDFVSLQN-DQLLNEVYYECEKD 120
           P P +EEP + ++P+ A ++MISCGE+  + +GL ++ D  SLQ+  QLL++ +YECE+D
Sbjct: 61  PDPILEEPILTVDPLSAALTMISCGED--TSQGLCELPDLGSLQSGQQLLDKAFYECEQD 120

Query: 121 LLEKAALETPLPQVLNIE-IPVLNPEETQIPENKPFPDVSIQKSTSSGCLSSMDLMQGPT 180
           L+ K+A+E+P   VL+I+ I V+    T I EN+      +QKS SSG LSSMD      
Sbjct: 121 LMMKSAMESPFSDVLDIKNISVV----TTINENQ-----DMQKSVSSGNLSSMDWSHAQQ 180

Query: 181 IKPSFLDFSGMDFSSVFGMRRAFSDGDIKTLSN 204
                 +F   DF   +GMRRAFS+GDI+   N
Sbjct: 181 ETVMIQNFPDFDFG--YGMRRAFSEGDIQVWQN 199

The following BLAST results are available for this feature:

BLAST of MS000491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140810.1	2.6e-157	100.00	zinc finger protein CONSTANS-LIKE 1-like [Momordica charantia]	[more]
KAG6576657.1	1.3e-135	86.36	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022923117.1	1.3e-132	84.97	uncharacterized protein LOC111430881 isoform X1 [Cucurbita moschata] >XP_0229231...	[more]
XP_023553012.1	2.3e-132	84.97	uncharacterized protein LOC111810531 [Cucurbita pepo subsp. pepo]	[more]
XP_008466816.1	1.9e-131	85.66	PREDICTED: uncharacterized protein LOC103504133 [Cucumis melo]	[more]

BLAST of MS000491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96502	7.5e-06	43.28	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]
Q940T9	2.9e-05	53.85	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9LJ44	3.7e-05	43.94	Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE...	[more]
Q9FHH8	3.7e-05	49.02	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
E5RQA1	3.7e-05	52.08	Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 ...	[more]

BLAST of MS000491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG74	1.3e-157	100.00	zinc finger protein CONSTANS-LIKE 1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1E5A1	6.4e-133	84.97	uncharacterized protein LOC111430881 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3CS26	9.2e-132	85.66	uncharacterized protein LOC103504133 OS=Cucumis melo OX=3656 GN=LOC103504133 PE=...	[more]
A0A6J1J936	1.6e-131	84.62	uncharacterized protein LOC111482856 OS=Cucurbita maxima OX=3661 GN=LOC111482856...	[more]
A0A0A0LC99	8.9e-127	83.22	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G247880 PE=4 SV...	[more]

BLAST of MS000491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53420.1	5.3e-55	48.03	CCT motif family protein	[more]
AT4G27900.1	1.1e-52	45.68	CCT motif family protein	[more]
AT4G27900.2	1.1e-52	45.68	CCT motif family protein	[more]
AT5G53420.2	5.7e-41	52.76	CCT motif family protein	[more]
AT5G53420.3	1.3e-29	41.31	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 224..266 e-value: 1.1E-16 score: 60.6
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 224..266 score: 14.931653
None	No IPR available	PANTHER	PTHR31717:SF2	CCT MOTIF FAMILY PROTEIN	coord: 37..271
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 37..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000491.1	MS000491.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding