MS000485 (gene) Bitter gourd (TR) v1

Overview
NameMS000485
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold44: 1998735 .. 1998860 (+)
RNA-Seq ExpressionMS000485
SyntenyMS000485
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGCAATGTTGGCAGTCGGGTATGGTCTTCACGATCTCTTTGGGCCGATATTCGGACAGGCAAATTGGGCAGATGCTGCCATTGGGCTCCGGTAGTCGTAGGCTTTGGCCCAATACAAATTTT

mRNA sequence

TGGAAGCAATGTTGGCAGTCGGGTATGGTCTTCACGATCTCTTTGGGCCGATATTCGGACAGGCAAATTGGGCAGATGCTGCCATTGGGCTCCGGTAGTCGTAGGCTTTGGCCCAATACAAATTTT

Coding sequence (CDS)

TGGAAGCAATGTTGGCAGTCGGGTATGGTCTTCACGATCTCTTTGGGCCGATATTCGGACAGGCAAATTGGGCAGATGCTGCCATTGGGCTCCGGTAGTCGTAGGCTTTGGCCCAATACAAATTTT

Protein sequence

WKQCWQSGMVFTISLGRYSDRQIGQMLPLGSGSRRLWPNTNF
Homology
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BLAST of MS000485 vs. NCBI nr
Match: XP_023873260.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 [Quercus suber])

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 1  WKQCWQSGMVFTISLGRYSDRQIGQMLPLGSGSRRLWPNT 41
          WKQCW  GMVF ++LGRY D+ IGQ+L LG G  RL P T
Sbjct: 17 WKQCWHLGMVFRVALGRYYDKHIGQVLSLGLGKLRLSPRT 56

The following BLAST results are available for this feature:
BLAST of MS000485 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023873260.17.0e-0662.50LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 [Que... [more]
BLAST of MS000485 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS000485 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS000485 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS000485.1MS000485.1mRNA