MS000460 (gene) Bitter gourd (TR) v1

Overview


Name	MS000460
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	plastid division protein PDV1
Location	scaffold44: 1865949 .. 1868032 (-)
RNA-Seq Expression	MS000460
Synteny	MS000460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAAATTTGGGACATTCACGACAAGCTCAGCGAAGCCATTCACTCAATTTCCCGAGATCACTTCCTCACCTCCACTAAGAATCTCAGGAAATCCCAAAACAAGGATTCTAAGACCCCCAATGGCGGTGCCGACGATAACCCTTCTGCCGCCTTCCCGTTCCTTAAGGAATTCCGGATCGACATTGACGACTCCGCGATCCAGGAGGCCCGGAGTCTAAATGCCATCCGAACTGCGCTTGAGAACCTTGAAGATCAGCTCGAGTTTCTCCACGTATGTTGAATCTTTTACCCTTTTTCCTGCGCTTCTATTATTAACTCTTTTCTTTACTTTACCAGTGAGGAATTAAGTGGTGATTCAATTAAGTGGTGTTTGAATCTGATTGGGGTTCCGTTATTACCCAAACGAACAGCTTCTATGTCGTTTTCTATGTTTGTGATTCAATTAAGTGGTGTTTCTTGCTTCCCAATCGGAGTTAAATCTGTAATTTATGGTTTTCTATGTTTGCTGCTGTCTGGATGGCTGAAATGCAGCGGAGGATAGGGAAACGAGAGTCTTGAGTTCATTATTCTTTAGCGTCCTTAATTTTTGTTCAACGCCATTGCCCAATTACCCTAAATATGGAGTACTAATTACTTGTAGCTTCTGTTTTGCTTGGTCTCTGGTTACTGGAAACTTGTGCAAATGACTGGATTTATCCTTTTTGTTCTATAATCTATGGGGTTTAAGCTGGGAGGAAAGCTTTTTGTTGAGATAATTTAAATGCAACGTGCATATGTTTAGAAGTGACTGTTATAGTTTGATTCTGTTTAGAAGTGACTGTTATAGTTTGATTACTTATTCTTATTCCAACTTCTATATTATGATTTCAGGGAGGTTTAAGGGAGGGGATATTCCTCTTCTTTTTTTTCTTTTATGAAGATTATCCACCAAGTTGAATTAAGTTTAGCAATAGCATGTGCATATAGCCTTGGATTTTTTTCTTTTTTTTTTTATTTTCTTAGGGCTGTTTAGAAGGCTTCCAAGAACAGTTTTCTGTTTTTATAAGATCAAATTTCTGGAAAGACATGTTGGGTAACTCTTTTTCGAAAAGTTCTTTCTTGTTTTCCTTTAGTTCGTTTTGATCGTGACGTTTTTATAGTACAATTGAAGTTTTTCATTTCAATAAAGGGAGGAAAGCTTTTTGTTGAGATAATTTAAATGCAATGTACATATGTTGAGATAATGGCGTAGATATTGAATTTTTTCAATCCATTCAATCATAGTTGAAAATAAAAGCAGCAAATTGTTTTGAAGACAGTCTGCTAGCCAAGGTCGAGTTTCTTCTTATTAATTCGACAAACTAAACTAACCACTGCTACCTAGCTGAGAGGAGACCTTGAATGGAACTGAAAGTTCACTCGGATGCTTCATTATAAAATGAGCGCAGTAATGAACAGCATTTGCGTTCTTTTATTTCTTATTAGTTGTGGGTTATGATGATTTTCTTTGGAGAGAATATTCATGCTTAGCAAATTCTTTATGTTTAGCAGACCGTACAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCGAGACTCGAGCAGAGTAGAATTGTTCTTGCAATGAGATTAGCTGAACATCATGGCAAGAACTACAAAGTCATCAATGAAGCTCTAGCATTTGTTGGAGATGTACGTTATGAAGCTAACTTTGTTTCACATGAAAATCAATATGGTCCACCATTTAGCCCGAATGGTCAGAAGCTTATGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTTTCAACTTTGCAAAGCAATCTCTCAAAATGGATAATGTGGGTGGGATACTCAGCAATGCTGCCATGGTTGCAATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTAGCATTCAAGCAGTCATCGCAGGAGAGAGACGATAATCCCTTCAACAGAAATCTTCGAAGAACTTCTCAGCTTGAGGGATCTTCCCCAAATGAAGATTTTGGCAACTTTGACGTGTTATCTGCAAGGGGT

mRNA sequence

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAAATTTGGGACATTCACGACAAGCTCAGCGAAGCCATTCACTCAATTTCCCGAGATCACTTCCTCACCTCCACTAAGAATCTCAGGAAATCCCAAAACAAGGATTCTAAGACCCCCAATGGCGGTGCCGACGATAACCCTTCTGCCGCCTTCCCGTTCCTTAAGGAATTCCGGATCGACATTGACGACTCCGCGATCCAGGAGGCCCGGAGTCTAAATGCCATCCGAACTGCGCTTGAGAACCTTGAAGATCAGCTCGAGTTTCTCCACACCGTACAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCGAGACTCGAGCAGAGTAGAATTGTTCTTGCAATGAGATTAGCTGAACATCATGGCAAGAACTACAAAGTCATCAATGAAGCTCTAGCATTTGTTGGAGATGTACGTTATGAAGCTAACTTTGTTTCACATGAAAATCAATATGGTCCACCATTTAGCCCGAATGGTCAGAAGCTTATGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTTTCAACTTTGCAAAGCAATCTCTCAAAATGGATAATGTGGGTGGGATACTCAGCAATGCTGCCATGGTTGCAATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTAGCATTCAAGCAGTCATCGCAGGAGAGAGACGATAATCCCTTCAACAGAAATCTTCGAAGAACTTCTCAGCTTGAGGGATCTTCCCCAAATGAAGATTTTGGCAACTTTGACGTGTTATCTGCAAGGGGT

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAAATTTGGGACATTCACGACAAGCTCAGCGAAGCCATTCACTCAATTTCCCGAGATCACTTCCTCACCTCCACTAAGAATCTCAGGAAATCCCAAAACAAGGATTCTAAGACCCCCAATGGCGGTGCCGACGATAACCCTTCTGCCGCCTTCCCGTTCCTTAAGGAATTCCGGATCGACATTGACGACTCCGCGATCCAGGAGGCCCGGAGTCTAAATGCCATCCGAACTGCGCTTGAGAACCTTGAAGATCAGCTCGAGTTTCTCCACACCGTACAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCGAGACTCGAGCAGAGTAGAATTGTTCTTGCAATGAGATTAGCTGAACATCATGGCAAGAACTACAAAGTCATCAATGAAGCTCTAGCATTTGTTGGAGATGTACGTTATGAAGCTAACTTTGTTTCACATGAAAATCAATATGGTCCACCATTTAGCCCGAATGGTCAGAAGCTTATGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTTTCAACTTTGCAAAGCAATCTCTCAAAATGGATAATGTGGGTGGGATACTCAGCAATGCTGCCATGGTTGCAATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTAGCATTCAAGCAGTCATCGCAGGAGAGAGACGATAATCCCTTCAACAGAAATCTTCGAAGAACTTCTCAGCTTGAGGGATCTTCCCCAAATGAAGATTTTGGCAACTTTGACGTGTTATCTGCAAGGGGT

Protein sequence

MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADDNPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMPNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG

Homology

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BLAST of MS000460 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120
           NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180
           RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180

Query: 181 NSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240
           NSSKRSNTLIKMLFSTFNFAK+SLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE
Sbjct: 181 NSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240

Query: 241 RDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           RDDNPFNRNLRRTSQLEGSSPNED GNFDVLSARG
Sbjct: 241 RDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

[Close]

BLAST of MS000460 vs. NCBI nr
Match: XP_022140819.1 (plastid division protein PDV1 isoform X1 [Momordica charantia])

HSP 1 Score: 523.9 bits (1348), Expect = 8.6e-145
Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLH-TVQVQQQVERDAAI 120
           NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLH TVQVQQQVERDAAI
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180
           ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM
Sbjct: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180

Query: 181 PNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240
           PNSSKRSNTLIKMLFSTFNFAK+SLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ
Sbjct: 181 PNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240

Query: 241 ERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           ERDDNPFNRNLRRTSQLEGSSPNED GNFDVLSARG
Sbjct: 241 ERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 276

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BLAST of MS000460 vs. NCBI nr
Match: XP_038878155.1 (plastid division protein PDV1 [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 3.8e-116
Identity = 227/276 (82.25%), Postives = 248/276 (89.86%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDS-KTPNGGAD 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFLTSTK+LRKS NKDS  TP+   +
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNKDSINTPDALPN 60

Query: 61  DNPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAI 120
              +A FPF+ EFRID+DDSAIQEARSLN+IRTALENLEDQ EF HTV+VQQQVERDAAI
Sbjct: 61  ---TAVFPFINEFRIDLDDSAIQEARSLNSIRTALENLEDQFEFFHTVKVQQQVERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180
           ARLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VSHENQYGP FS + QK +
Sbjct: 121 ARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENQYGPEFSTSSQKPV 180

Query: 181 PNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240
            NSSKRSNT I+MLFST NFA++SLKMD+VGGIL NAAMVAISMLAFLHLHQVA+K+   
Sbjct: 181 SNSSKRSNTRIQMLFSTLNFARKSLKMDHVGGILGNAAMVAISMLAFLHLHQVAYKEPPL 240

Query: 241 ERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           ERD+ PFNRNLRRTS+LE SSPNEDF NFDVLSARG
Sbjct: 241 ERDNIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 273

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BLAST of MS000460 vs. NCBI nr
Match: XP_023541198.1 (plastid division protein PDV1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.9e-115
Identity = 216/275 (78.55%), Postives = 245/275 (89.09%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDME+EEIE +LEKIWD+HDKLSEAIHSI+RDHFLTST+NLRKS  KDSK+P+G    
Sbjct: 1   MKWDMELEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSGRPTH 60

Query: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120
           NP+   PF+++FRI +DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQV+RDAAIA
Sbjct: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180
           RLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+ SH  Q  PPF+PN +KL  
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180

Query: 181 NSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240
           NSSKRSN ++KMLFST + A++SLKMDNVGGIL NAA+VAISMLAFLH+H +A+K+ S E
Sbjct: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240

Query: 241 RDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           +DD PFNRNLRRTS+LEGSSPNEDF NFDVLSARG
Sbjct: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 275

[Close]

BLAST of MS000460 vs. NCBI nr
Match: XP_008439328.2 (PREDICTED: plastid division protein PDV1 [Cucumis melo] >KAA0033742.1 plastid division protein PDV1 [Cucumis melo var. makuwa] >TYK31702.1 plastid division protein PDV1 [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 5.4e-115
Identity = 226/282 (80.14%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFLTSTK+LRKS N ++   N   D 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNN---NNNKDS 60

Query: 61  N-------PSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQV 120
           N        +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQV
Sbjct: 61  NNAPIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV 120

Query: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSP 180
           ERDAAIARLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VSHEN+ GP FSP
Sbjct: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSP 180

Query: 181 NGQKLMPNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVA 240
            GQK +PNSSKRSNTLIKMLFST +FA++SLKMD+VGGIL NAAMVAISM+AFLHLHQVA
Sbjct: 181 KGQKPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVA 240

Query: 241 FKQSSQERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           +K +  ERDD PF+RNLRRTS+L+ SS NEDF NFDVLSARG
Sbjct: 241 YKVAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of MS000460 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.2e-68
Identity = 142/273 (52.01%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 4   DMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADDNPS 63
           +MEIEEIEAVLEKIWD+HDKLS+ IH IS+ HFL S K   +S+ +  K P+G + ++  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  AAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIARLE 123
             + F+K F +D +DS IQEA+SLNAIRTALENLEDQLEF HT+  QQ+ E+D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMPNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  +++VS ++ Y    +P+G   +P+  
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGI 182

Query: 184 KRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSS-QERD 243
           + SN +I    STF FAK++L  ++V G+L NAA+ AIS++A LHLHQVA  +   Q+++
Sbjct: 183 E-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 DNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           D  +    R+T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of MS000460 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 5   MEIEE-IEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADDNPS 64
           ME EE I  +L +  ++  K+S+ I + S         N   S  +  K+   G  D   
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQD--- 60

Query: 65  AAFPFLKEF-RIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIARL 124
                 K+F  I  +D    EA  L  IR ALE LE QL  L  ++ +QQ E+  A++ +
Sbjct: 61  ------KDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 120

Query: 125 EQSRIVLAMRLAEHHGKNYKVINEALAFVGD-VRYEANFVSHENQYGPPFS 173
           + SR +L  +L E+ GK+++V+ E   F G+ V YE + +       PP S
Sbjct: 121 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLS 162

[Close]

BLAST of MS000460 vs. ExPASy TrEMBL
Match: A0A6J1CG84 (plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120
           NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180
           RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180

Query: 181 NSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240
           NSSKRSNTLIKMLFSTFNFAK+SLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE
Sbjct: 181 NSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240

Query: 241 RDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           RDDNPFNRNLRRTSQLEGSSPNED GNFDVLSARG
Sbjct: 241 RDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

[Close]

BLAST of MS000460 vs. ExPASy TrEMBL
Match: A0A6J1CGU5 (plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.2e-145
Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLH-TVQVQQQVERDAAI 120
           NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLH TVQVQQQVERDAAI
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180
           ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM
Sbjct: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180

Query: 181 PNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240
           PNSSKRSNTLIKMLFSTFNFAK+SLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ
Sbjct: 181 PNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240

Query: 241 ERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           ERDDNPFNRNLRRTSQLEGSSPNED GNFDVLSARG
Sbjct: 241 ERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 276

[Close]

BLAST of MS000460 vs. ExPASy TrEMBL
Match: A0A5D3E713 (Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00010 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.6e-115
Identity = 226/282 (80.14%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFLTSTK+LRKS N ++   N   D 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNN---NNNKDS 60

Query: 61  N-------PSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQV 120
           N        +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQV
Sbjct: 61  NNAPIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV 120

Query: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSP 180
           ERDAAIARLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VSHEN+ GP FSP
Sbjct: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSP 180

Query: 181 NGQKLMPNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVA 240
            GQK +PNSSKRSNTLIKMLFST +FA++SLKMD+VGGIL NAAMVAISM+AFLHLHQVA
Sbjct: 181 KGQKPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVA 240

Query: 241 FKQSSQERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           +K +  ERDD PF+RNLRRTS+L+ SS NEDF NFDVLSARG
Sbjct: 241 YKVAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of MS000460 vs. ExPASy TrEMBL
Match: A0A1S3AYK3 (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.6e-115
Identity = 226/282 (80.14%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFLTSTK+LRKS N ++   N   D 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNN---NNNKDS 60

Query: 61  N-------PSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQV 120
           N        +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQV
Sbjct: 61  NNAPIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV 120

Query: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSP 180
           ERDAAIARLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VSHEN+ GP FSP
Sbjct: 121 ERDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSP 180

Query: 181 NGQKLMPNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVA 240
            GQK +PNSSKRSNTLIKMLFST +FA++SLKMD+VGGIL NAAMVAISM+AFLHLHQVA
Sbjct: 181 KGQKPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVA 240

Query: 241 FKQSSQERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           +K +  ERDD PF+RNLRRTS+L+ SS NEDF NFDVLSARG
Sbjct: 241 YKVAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of MS000460 vs. ExPASy TrEMBL
Match: A0A0A0LCS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.5e-115
Identity = 223/278 (80.22%), Postives = 246/278 (88.49%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFL STK+LRKS N ++   +     
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NP---SAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDA 120
            P   +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VS EN+ GP FSPNGQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 LMPNSSKRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQS 240
            +PNSSKRSNTLIKMLFST +FA++SLKMD+VGGIL NAAMVAISM+AFLHLHQVA+K +
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 SQERDDNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
             ERDD PFNRNLRRTS+L+ SS NEDF NFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of MS000460 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 )

HSP 1 Score: 259.2 bits (661), Expect = 3.7e-69
Identity = 142/273 (52.01%), Postives = 194/273 (71.06%), Query Frame = 0


Query: 4   DMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADDNPS 63
           +MEIEEIEAVLEKIWD+HDKLS+ IH IS+ HFL S K   +S+ +  K P+G + ++  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  AAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIARLE 123
             + F+K F +D +DS IQEA+SLNAIRTALENLEDQLEF HT+  QQ+ E+D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMPNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  +++VS ++ Y    +P+G   +P+  
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGI 182

Query: 184 KRSNTLIKMLFSTFNFAKQSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSS-QERD 243
           + SN +I    STF FAK++L  ++V G+L NAA+ AIS++A LHLHQVA  +   Q+++
Sbjct: 183 E-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 DNPFNRNLRRTSQLEGSSPNEDFGNFDVLSARG 276
           D  +    R+T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of MS000460 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 )

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-07
Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 5   MEIEE-IEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADDNPS 64
           ME EE I  +L +  ++  K+S+ I + S         N   S  +  K+   G  D   
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQD--- 60

Query: 65  AAFPFLKEF-RIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIARL 124
                 K+F  I  +D    EA  L  IR ALE LE QL  L  ++ +QQ E+  A++ +
Sbjct: 61  ------KDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 120

Query: 125 EQSRIVLAMRLAEHHGKNYKVINEALAFVGD-VRYEANFVSHENQYGPPFS 173
           + SR +L  +L E+ GK+++V+ E   F G+ V YE + +       PP S
Sbjct: 121 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLS 162

The following BLAST results are available for this feature:

BLAST of MS000460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140820.1	3.5e-146	99.27	plastid division protein PDV1 isoform X2 [Momordica charantia]	[more]
XP_022140819.1	8.6e-145	98.91	plastid division protein PDV1 isoform X1 [Momordica charantia]	[more]
XP_038878155.1	3.8e-116	82.25	plastid division protein PDV1 [Benincasa hispida]	[more]
XP_023541198.1	1.9e-115	78.55	plastid division protein PDV1 [Cucurbita pepo subsp. pepo]	[more]
XP_008439328.2	5.4e-115	80.14	PREDICTED: plastid division protein PDV1 [Cucumis melo] >KAA0033742.1 plastid di...	[more]

BLAST of MS000460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK13	5.2e-68	52.01	Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1	[more]
Q9XII1	4.3e-06	30.99	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]

BLAST of MS000460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG84	1.7e-146	99.27	plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CGU5	4.2e-145	98.91	plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5D3E713	2.6e-115	80.14	Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AYK3	2.6e-115	80.14	plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1	[more]
A0A0A0LCS6	4.5e-115	80.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1	[more]

BLAST of MS000460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53280.1	3.7e-69	52.01	plastid division1	[more]
AT2G16070.2	3.1e-07	30.99	plastid division2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..275
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 1..275
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	PLASTID DIVISION PROTEIN PDV2	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000460.1	MS000460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission