MS000442 (gene) Bitter gourd (TR) v1

Overview


Name	MS000442
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Location	scaffold44: 1700912 .. 1701463 (-)
RNA-Seq Expression	MS000442
Synteny	MS000442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTCTGTTGTGTTCCTATAGGCAAGCTCTCCACCTCTCGGAGCCTCCGCCATGGAAACCGAGAAGCCGAATCAACGACTCAACAATCACGAAGAATCTCACCAATCTCTCAAGAATAGCCAGAGGCGACGTCCGAGTAAACGCCAAGGGCTTCACAGGTACTCCGGCGACGGCGAAAGAAAGAGAAGCTGCCGCAAGGAAAATTTCCGGCCAAAACAACAGCAGCAACGACGACGACGATGAAATTCCAGAGGCCGTATCCAACAGGATTATAACGAGAATTTTGGCTTTCGTCGGAGTTCCGATGGCGTTTGGTGTGGCATTGCTAAAGATTTTCGAGACGATCAAGGAGCAGAAGGTGTGGGATGTGCCGATTTGGCTACCATTTTTGACGACTTTCTTGACGTTCGGAGCTTCGACGATCGGAATCGCGTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGTCGCTGTTCGGATGGGAGGAGGCGCAGAAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAGTCGC

mRNA sequence

ATGAAAGCTCTGTTGTGTTCCTATAGGCAAGCTCTCCACCTCTCGGAGCCTCCGCCATGGAAACCGAGAAGCCGAATCAACGACTCAACAATCACGAAGAATCTCACCAATCTCTCAAGAATAGCCAGAGGCGACGTCCGAGTAAACGCCAAGGGCTTCACAGGTACTCCGGCGACGGCGAAAGAAAGAGAAGCTGCCGCAAGGAAAATTTCCGGCCAAAACAACAGCAGCAACGACGACGACGATGAAATTCCAGAGGCCGTATCCAACAGGATTATAACGAGAATTTTGGCTTTCGTCGGAGTTCCGATGGCGTTTGGTGTGGCATTGCTAAAGATTTTCGAGACGATCAAGGAGCAGAAGGTGTGGGATGTGCCGATTTGGCTACCATTTTTGACGACTTTCTTGACGTTCGGAGCTTCGACGATCGGAATCGCGTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGTCGCTGTTCGGATGGGAGGAGGCGCAGAAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAGTCGC

Coding sequence (CDS)

ATGAAAGCTCTGTTGTGTTCCTATAGGCAAGCTCTCCACCTCTCGGAGCCTCCGCCATGGAAACCGAGAAGCCGAATCAACGACTCAACAATCACGAAGAATCTCACCAATCTCTCAAGAATAGCCAGAGGCGACGTCCGAGTAAACGCCAAGGGCTTCACAGGTACTCCGGCGACGGCGAAAGAAAGAGAAGCTGCCGCAAGGAAAATTTCCGGCCAAAACAACAGCAGCAACGACGACGACGATGAAATTCCAGAGGCCGTATCCAACAGGATTATAACGAGAATTTTGGCTTTCGTCGGAGTTCCGATGGCGTTTGGTGTGGCATTGCTAAAGATTTTCGAGACGATCAAGGAGCAGAAGGTGTGGGATGTGCCGATTTGGCTACCATTTTTGACGACTTTCTTGACGTTCGGAGCTTCGACGATCGGAATCGCGTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGTCGCTGTTCGGATGGGAGGAGGCGCAGAAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAGTCGC

Protein sequence

MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATAKEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEEDEASR

Homology

[Close]

BLAST of MS000442 vs. NCBI nr
Match: XP_022140980.1 (uncharacterized protein PAM68-like [Momordica charantia])

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60

Query: 61  KEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ 120
           KEREAAARKISGQNNSSNDDDDEI EAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ
Sbjct: 61  KEREAAARKISGQNNSSNDDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ 120

Query: 121 KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED 180
           KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED
Sbjct: 121 KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED 180

Query: 181 EASR 185
           EASR
Sbjct: 181 EASR 184

[Close]

BLAST of MS000442 vs. NCBI nr
Match: XP_038877436.1 (uncharacterized protein PAM68-like [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 6.1e-78
Identity = 147/184 (79.89%), Postives = 166/184 (90.22%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+ QAL LS+PPPW  RSRINDSTITK L+N +RI+RG V+VNAKGF+G+P+TA
Sbjct: 1   MKALVCSFCQALLLSKPPPWNQRSRINDSTITKKLSNFTRISRGQVQVNAKGFSGSPSTA 60

Query: 61  KEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ 120
           K+RE  A+K+SGQNN   DDDDEIPEAV +RIITRILAFVGVPMAFGV LLKIF+ IKEQ
Sbjct: 61  KDREIEAKKLSGQNNKKEDDDDEIPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQ 120

Query: 121 KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED 180
            VWDVPIWLPFLTTFLTFGAST+GIAYGTLS SLDPEK+GS+FGWEEAQKNWVEMWKEED
Sbjct: 121 NVWDVPIWLPFLTTFLTFGASTMGIAYGTLSTSLDPEKKGSVFGWEEAQKNWVEMWKEED 180

Query: 181 EASR 185
           E +R
Sbjct: 181 EEAR 184

[Close]

BLAST of MS000442 vs. NCBI nr
Match: KAG6574203.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.4e-74
Identity = 142/188 (75.53%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+R ALHLS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KEREAAARKISGQNNS----SNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFET 120
           K+RE A +K SGQNNS      DDDDEIPEAV+ RIITRILAFVG+PMAFGV L+KI E 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGGDDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEA 120

Query: 121 IKEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMW 180
           + EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEASR 185
           KEEDEA+R
Sbjct: 181 KEEDEANR 188

[Close]

BLAST of MS000442 vs. NCBI nr
Match: XP_022944901.1 (uncharacterized protein PAM68-like [Cucurbita moschata])

HSP 1 Score: 288.5 bits (737), Expect = 4.1e-74
Identity = 142/186 (76.34%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+R ALHLS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KEREAAARKISGQNNS--SNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIK 120
           K+RE A +K SGQNNS     DDDEIPEAV+ RIITRILAFVGVPMAFGV L+KI E + 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAVH 120

Query: 121 EQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKE 180
           EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEASR 185
           EDEA+R
Sbjct: 181 EDEANR 186

[Close]

BLAST of MS000442 vs. NCBI nr
Match: XP_023541387.1 (uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 5.9e-73
Identity = 141/187 (75.40%), Postives = 161/187 (86.10%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+R AL LS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KEREAAARKISGQNNS---SNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETI 120
           K+RE A +K SGQNNS      DDDEIPEAV+ RIITRILAFVGVPMAFGV L+KI E +
Sbjct: 61  KDRETAVKKPSGQNNSRGGGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWK 180
            EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEASR 185
           EEDEA+R
Sbjct: 181 EEDEANR 187

[Close]

BLAST of MS000442 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 77/183 (42.08%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNL--SRIARGDVRVNA--KGFTGT 60
           M+ALLCS+R         P    SR    T + N   L  +   R + +++A  KGF  +
Sbjct: 1   MRALLCSHRLL-------PLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSS 60

Query: 61  PATAKEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFET 120
             + K          G+ +   +DD  IP+ V  R++ RI+  VG P+  GVA+LK+ E 
Sbjct: 61  RTSEK---------PGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEV 120

Query: 121 IKEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMW 180
           +K++ VWDVP+W+P+LTT +TFG+S +GIAYG+LS +LDP K  SLFG +EA++NWVEMW
Sbjct: 121 LKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMW 167

[Close]

BLAST of MS000442 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-21
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 0


Query: 21  KPRSRINDSTITKNLTNLSRIARGDVRVNA-KGFTGTPATAKEREAAARKISGQNNSSND 80
           K +S++  S    N   +SRIA     +N+ KGF   P   K+    ++K    N S  D
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGFGPPPKKTKK----SKKPKPGNQSDED 96

Query: 81  DDDE---------------IPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQKVWD 140
           DDDE               IPE V+NR+I+R+   VG+P+  G+     F  +K     D
Sbjct: 97  DDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVD 156

Query: 141 VPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWK 178
           VP W+PF+ +F+ FG +  G++YG +S+S DP +EGSL GW EA+KNW   W+
Sbjct: 157 VPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

[Close]

BLAST of MS000442 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60

Query: 61  KEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ 120
           KEREAAARKISGQNNSSNDDDDEI EAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ
Sbjct: 61  KEREAAARKISGQNNSSNDDDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQ 120

Query: 121 KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED 180
           KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED
Sbjct: 121 KVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEED 180

Query: 181 EASR 185
           EASR
Sbjct: 181 EASR 184

[Close]

BLAST of MS000442 vs. ExPASy TrEMBL
Match: A0A6J1FZC0 (uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 142/186 (76.34%), Postives = 162/186 (87.10%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+R ALHLS+PPPWK RSRI+DST TKNL   +R +RG +++NAKGFTG+PATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KEREAAARKISGQNNS--SNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIK 120
           K+RE A +K SGQNNS     DDDEIPEAV+ RIITRILAFVGVPMAFGV L+KI E + 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAVH 120

Query: 121 EQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKE 180
           EQK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEASR 185
           EDEA+R
Sbjct: 181 EDEANR 186

[Close]

BLAST of MS000442 vs. ExPASy TrEMBL
Match: A0A6J1HYL3 (uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.1e-72
Identity = 137/185 (74.05%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60
           MKAL+CS+R AL LS+PPPWK RSRI++ST TKNL   +  +RG +++NAKGFTG+PATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPATA 60

Query: 61  KEREAAARKISGQNNS-SNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKE 120
           K+RE A +K+S QNNS    DDDEIPEAV+ RIITRILAFVG+PMAFGV L+KI E + E
Sbjct: 61  KDRETAVKKLSDQNNSRDGGDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAVHE 120

Query: 121 QKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEE 180
           QK+W VPIWLPFLT FLTFGAST+GIAYGTLS SLDPEKEG+LFGW+EAQKNWVEMWKEE
Sbjct: 121 QKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKEE 180

Query: 181 DEASR 185
           DEA+R
Sbjct: 181 DEANR 185

[Close]

BLAST of MS000442 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70
Identity = 139/185 (75.14%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRS-RINDSTITKNLTNLSRIARGDVRVNAKGFTGTPAT 60
           MK+  CS+RQAL L +PPP   R+  INDSTITKNL+N +  +RG V+VNAKGFTG+PAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKE 120
           AK RE AA+ +SGQNN + DDDDEIPEAV +RIITRILAFVG+PMAFGV LLKIF+ IKE
Sbjct: 61  AKNRETAAKNLSGQNN-NEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEE 180
           Q +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180

Query: 181 DEASR 185
           DE SR
Sbjct: 181 DEVSR 184

[Close]

BLAST of MS000442 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70
Identity = 139/185 (75.14%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRS-RINDSTITKNLTNLSRIARGDVRVNAKGFTGTPAT 60
           MK+  CS+RQAL L +PPP   R+  INDSTITKNL+N +  +RG V+VNAKGFTG+PAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKE 120
           AK RE AA+ +SGQNN + DDDDEIPEAV +RIITRILAFVG+PMAFGV LLKIF+ IKE
Sbjct: 61  AKNRETAAKNLSGQNN-NEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKEE 180
           Q +WDVPIW+PF TTFLTFGAST+GIAYGTLS SLDPEK+GS+ GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180

Query: 181 DEASR 185
           DE SR
Sbjct: 181 DEVSR 184

[Close]

BLAST of MS000442 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 134.4 bits (337), Expect = 9.1e-32
Identity = 77/183 (42.08%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNL--SRIARGDVRVNA--KGFTGT 60
           M+ALLCS+R         P    SR    T + N   L  +   R + +++A  KGF  +
Sbjct: 1   MRALLCSHRLL-------PLSSLSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSS 60

Query: 61  PATAKEREAAARKISGQNNSSNDDDDEIPEAVSNRIITRILAFVGVPMAFGVALLKIFET 120
             + K          G+ +   +DD  IP+ V  R++ RI+  VG P+  GVA+LK+ E 
Sbjct: 61  RTSEK---------PGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEV 120

Query: 121 IKEQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMW 180
           +K++ VWDVP+W+P+LTT +TFG+S +GIAYG+LS +LDP K  SLFG +EA++NWVEMW
Sbjct: 121 LKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMW 167

[Close]

BLAST of MS000442 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-22
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 0


Query: 21  KPRSRINDSTITKNLTNLSRIARGDVRVNA-KGFTGTPATAKEREAAARKISGQNNSSND 80
           K +S++  S    N   +SRIA     +N+ KGF   P   K+    ++K    N S  D
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGFGPPPKKTKK----SKKPKPGNQSDED 96

Query: 81  DDDE---------------IPEAVSNRIITRILAFVGVPMAFGVALLKIFETIKEQKVWD 140
           DDDE               IPE V+NR+I+R+   VG+P+  G+     F  +K     D
Sbjct: 97  DDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVD 156

Query: 141 VPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWK 178
           VP W+PF+ +F+ FG +  G++YG +S+S DP +EGSL GW EA+KNW   W+
Sbjct: 157 VPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

The following BLAST results are available for this feature:

BLAST of MS000442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140980.1	2.9e-96	99.46	uncharacterized protein PAM68-like [Momordica charantia]	[more]
XP_038877436.1	6.1e-78	79.89	uncharacterized protein PAM68-like [Benincasa hispida]	[more]
KAG6574203.1	1.4e-74	75.53	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022944901.1	4.1e-74	76.34	uncharacterized protein PAM68-like [Cucurbita moschata]	[more]
XP_023541387.1	5.9e-73	75.40	uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS000442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTD9	1.3e-30	42.08	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]
O49668	1.4e-21	36.99	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]

BLAST of MS000442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGP3	1.4e-96	99.46	uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150...	[more]
A0A6J1FZC0	2.0e-74	76.34	uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293...	[more]
A0A6J1HYL3	9.1e-72	74.05	uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 P...	[more]
A0A5A7STB5	2.3e-70	75.14	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A1S3AZ57	2.3e-70	75.14	uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ...	[more]

BLAST of MS000442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52780.1	9.1e-32	42.08	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	1.0e-22	36.99	Protein of unknown function (DUF3464)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 57..178 e-value: 7.5E-42 score: 142.6
IPR021855	PAM68-like	PANTHER	PTHR34575	PROTEIN PAM68, CHLOROPLASTIC	coord: 1..182
None	No IPR available	PANTHER	PTHR34575:SF6	EXPRESSED PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS000442.1	MS000442.1	mRNA